>emb|BX294187.6| Zebrafish DNA sequence from clone CH211-233E16 in linkage group 16,
             complete sequence
          Length = 74464

 Score = 46.1 bits (23), Expect = 0.017
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 19    cgtcgtcctctcctctctgcttc 41
             |||||||||||||||||||||||
Sbjct: 13302 cgtcgtcctctcctctctgcttc 13324

>gb|AC132385.5| Mus musculus BAC clone RP23-438F21 from chromosome 18, complete sequence
          Length = 184478

 Score = 42.1 bits (21), Expect = 0.26
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 33     ctctgcttccacactacaagaagca 57
              ||||||||||| |||||||||||||
Sbjct: 148752 ctctgcttccagactacaagaagca 148728

>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia
          Length = 1923819

 Score = 42.1 bits (21), Expect = 0.26
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 15     gcttcgtcgtcctctcctctc 35
              |||||||||||||||||||||
Sbjct: 295120 gcttcgtcgtcctctcctctc 295100

>gb|AC124448.4| Mus musculus BAC clone RP24-211A8 from chromosome 18, complete sequence
          Length = 159308

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    ctctcctctctgcttccaca 45
             ||||||||||||||||||||
Sbjct: 76801 ctctcctctctgcttccaca 76820

>gb|AC093635.4| Homo sapiens BAC clone RP11-191L17 from 2, complete sequence
          Length = 132032

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     ctctcctctctgcttccaca 45
              ||||||||||||||||||||
Sbjct: 117110 ctctcctctctgcttccaca 117091

>emb|CT025692.15| Mouse DNA sequence from clone RP23-312G18 on chromosome 17, complete
            sequence
          Length = 177741

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 28   ctcctctctgcttccacact 47
            ||||||||||||||||||||
Sbjct: 2303 ctcctctctgcttccacact 2284

>gb|AC148012.5| Mus musculus BAC clone RP23-174D18 from 18, complete sequence
          Length = 226568

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     ctctcctctctgcttccaca 45
              ||||||||||||||||||||
Sbjct: 193230 ctctcctctctgcttccaca 193249

>gb|AC170999.2| Mus musculus BAC clone RP23-443L17 from chromosome 14, complete
             sequence
          Length = 196017

 Score = 40.1 bits (20), Expect = 1.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    ctctctgcttccacactaca 50
             ||||||||||||||||||||
Sbjct: 69531 ctctctgcttccacactaca 69512

>gb|AC167245.2| Mus musculus BAC clone RP23-421F2 from chromosome 19, complete sequence
          Length = 198219

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 24    tcctctcctctctgcttcc 42
             |||||||||||||||||||
Sbjct: 45457 tcctctcctctctgcttcc 45475

>ref|NM_022547.1| Rattus norvegicus formyltetrahydrofolate dehydrogenase (Fthfd), mRNA
          Length = 3109

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                           
Query: 18   tcgtcgtcctctcctctctgcttccacacta 48
            ||||||||||| |||||| |||||| |||||
Sbjct: 1364 tcgtcgtcctcccctctcagcttcctcacta 1334

>gb|AC164422.2| Mus musculus chromosome 19, clone RP23-407G6, complete sequence
          Length = 212046

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 24    tcctctcctctctgcttcc 42
             |||||||||||||||||||
Sbjct: 39068 tcctctcctctctgcttcc 39086

>gb|AY022005.1| Oryza sativa microsatellite MRG4330 containing (TC)X12, closest to
           marker C37, genomic sequence
          Length = 224

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 16  cttcgtcgtcctctcctct 34
           |||||||||||||||||||
Sbjct: 190 cttcgtcgtcctctcctct 208

>gb|AC139636.12| Mus musculus chromosome 5, clone RP24-182D2, complete sequence
          Length = 172097

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 25     cctctcctctctgcttcca 43
              |||||||||||||||||||
Sbjct: 160031 cctctcctctctgcttcca 160013

>gb|AC119954.12| Mus musculus chromosome 1, clone RP24-450P2, complete sequence
          Length = 179212

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 27     tctcctctctgcttccaca 45
              |||||||||||||||||||
Sbjct: 125313 tctcctctctgcttccaca 125331

>gb|AC146132.3| Pan troglodytes BAC clone RP43-23H13 from 7, complete sequence
          Length = 164355

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 26    ctctcctctctgcttccac 44
             |||||||||||||||||||
Sbjct: 12573 ctctcctctctgcttccac 12591

>gb|AC160529.6| Mus musculus chromosome 1, clone RP24-141F19, complete sequence
          Length = 167687

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 27     tctcctctctgcttccaca 45
              |||||||||||||||||||
Sbjct: 107709 tctcctctctgcttccaca 107691

>gb|AC121791.3| Mus musculus BAC clone RP23-401H19 from chromosome 14, complete sequence
          Length = 197720

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 23     gtcctctcctctctgcttc 41
              |||||||||||||||||||
Sbjct: 135762 gtcctctcctctctgcttc 135780

>gb|AC006956.16| Mus musculus Chromosome 19 BAC Clone 7d23, complete sequence
          Length = 132397

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 24    tcctctcctctctgcttcc 42
             |||||||||||||||||||
Sbjct: 72003 tcctctcctctctgcttcc 71985

>emb|AL512384.9| Human DNA sequence from clone RP11-317E16 on chromosome 6 Contains the
             3' end of the gene for sectretagogin (SECRET), the genes
             for novel H2A and H2B histone family members, H2A and H2B
             histone family pseudogenes, complete sequence
          Length = 49963

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 26    ctctcctctctgcttccac 44
             |||||||||||||||||||
Sbjct: 22964 ctctcctctctgcttccac 22946

>emb|AJ617728.1| Ornithorhynchus anatinus partial mRNA for alphaB-crystallin (cryaB
           gene)
          Length = 501

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 71  tggcgctcctcgcgctggccgtg 93
           |||||||||||| ||||||||||
Sbjct: 344 tggcgctcctcgtgctggccgtg 322

>emb|AL646101.7| Mouse DNA sequence from clone RP23-145E14 on chromosome 11, complete
             sequence
          Length = 169742

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 25    cctctcctctctgcttcca 43
             |||||||||||||||||||
Sbjct: 30795 cctctcctctctgcttcca 30813

>gb|AC055840.10| Homo sapiens chromosome 18, clone RP11-645I23, complete sequence
          Length = 175293

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 24     tcctctcctctctgcttcc 42
              |||||||||||||||||||
Sbjct: 132153 tcctctcctctctgcttcc 132135

>dbj|AK083098.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length
           enriched library, clone:C630012D20
           product:unclassifiable, full insert sequence
          Length = 3403

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 28  ctcctctctgcttccacac 46
           |||||||||||||||||||
Sbjct: 729 ctcctctctgcttccacac 747

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 16       cttcgtcgtcctctcctct 34
                |||||||||||||||||||
Sbjct: 23418010 cttcgtcgtcctctcctct 23418028

>gb|AC115775.12| Mus musculus chromosome 8, clone RP23-125P1, complete sequence
          Length = 189510

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 24    tcctctcctctctgcttcc 42
             |||||||||||||||||||
Sbjct: 53721 tcctctcctctctgcttcc 53703

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 73      gcgctcctcgcgctggccg 91
               |||||||||||||||||||
Sbjct: 4253369 gcgctcctcgcgctggccg 4253351

>gb|AE004776.1| Pseudomonas aeruginosa PAO1, section 337 of 529 of the complete
            genome
          Length = 11673

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 71   tggcgctcctcgcgctggc 89
            |||||||||||||||||||
Sbjct: 8830 tggcgctcctcgcgctggc 8848

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 73      gcgctcctcgcgctggccg 91
               |||||||||||||||||||
Sbjct: 2927216 gcgctcctcgcgctggccg 2927234

>dbj|AP006457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0038P01
          Length = 148506

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 16     cttcgtcgtcctctcctct 34
              |||||||||||||||||||
Sbjct: 131085 cttcgtcgtcctctcctct 131103

>dbj|AP005293.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1653_F07, complete sequence
          Length = 110109

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 16    cttcgtcgtcctctcctct 34
             |||||||||||||||||||
Sbjct: 36685 cttcgtcgtcctctcctct 36703

>gb|AC138456.5| Mus musculus BAC clone RP24-262P4 from 3, complete sequence
          Length = 166191

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 28    ctcctctctgcttccacac 46
             |||||||||||||||||||
Sbjct: 91456 ctcctctctgcttccacac 91474

>gb|AC121845.3| Mus musculus BAC clone RP24-82B23 from 5, complete sequence
          Length = 217530

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 25    cctctcctctctgcttcca 43
             |||||||||||||||||||
Sbjct: 54264 cctctcctctctgcttcca 54246

>gb|AC155900.1| Loxodonta africana, clone Loxodonta africana-6767875G2, complete
             sequence
          Length = 39131

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 24    tcctctcctctctgcttcc 42
             |||||||||||||||||||
Sbjct: 37472 tcctctcctctctgcttcc 37490

>gb|M59861.1|RAT10HCO Rattus norvegicus 10-formyltetrahydrofolate dehydrogenase mRNA,
            complete cds
          Length = 3109

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                           
Query: 18   tcgtcgtcctctcctctctgcttccacacta 48
            ||||||||||| |||||| |||||| |||||
Sbjct: 1364 tcgtcgtcctcccctctcagcttcctcacta 1334

>gb|BC089101.1| Rattus norvegicus formyltetrahydrofolate dehydrogenase, mRNA (cDNA
            clone MGC:105431 IMAGE:7306458), complete cds
          Length = 3134

 Score = 38.2 bits (19), Expect = 4.0
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                           
Query: 18   tcgtcgtcctctcctctctgcttccacacta 48
            ||||||||||| |||||| |||||| |||||
Sbjct: 1373 tcgtcgtcctcccctctcagcttcctcacta 1343


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 976,350
Number of Sequences: 3902068
Number of extensions: 976350
Number of successful extensions: 73776
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73396
Number of HSP's gapped (non-prelim): 380
length of query: 93
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 72
effective length of database: 17,151,101,840
effective search space: 1234879332480
effective search space used: 1234879332480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)