>CY561_BOVIN (P10897) Cytochrome b561 (Cytochrome b-561)|
          Length = 252

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 18/38 (47%), Positives = 25/38 (65%)
 Frame = +2

Query: 290 MVLVWCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIIL 403
           M   W   +RGG+A+E+A   L FNVHP+ M+IG + L
Sbjct: 31  MTGAWLGMYRGGIAWESA---LQFNVHPLCMIIGLVFL 65

>CY561_SHEEP (Q95204) Cytochrome b561 (Cytochrome b-561)|
          Length = 252

 Score = 36.6 bits (83), Expect = 0.015
 Identities = 18/38 (47%), Positives = 25/38 (65%)
 Frame = +2

Query: 290 MVLVWCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIIL 403
           M   W   +RGG+A+E+A   L FNVHP+ M+IG + L
Sbjct: 31  MTGAWLGMYRGGIAWESA---LQFNVHPLCMVIGLVFL 65

>CY561_PIG (Q95245) Cytochrome b561 (Cytochrome b-561)|
          Length = 252

 Score = 36.6 bits (83), Expect = 0.015
 Identities = 17/34 (50%), Positives = 24/34 (70%)
 Frame = +2

Query: 302 WCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIIL 403
           W   +RGG+A+E+A   L FNVHP+ M+IG + L
Sbjct: 35  WLGAYRGGIAWESA---LQFNVHPLCMIIGLVFL 65

>CY561_MOUSE (Q60720) Cytochrome b561 (Cytochrome b-561)|
          Length = 250

 Score = 35.0 bits (79), Expect = 0.042
 Identities = 17/34 (50%), Positives = 24/34 (70%)
 Frame = +2

Query: 302 WCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIIL 403
           W   +RGG+A+E++   L FNVHP+ M+IG I L
Sbjct: 33  WLGLYRGGIAWESS---LQFNVHPLCMVIGMIFL 63

>CY561_PONPY (Q5RCZ2) Cytochrome b561 (Cytochrome b-561)|
          Length = 251

 Score = 33.9 bits (76), Expect = 0.095
 Identities = 17/38 (44%), Positives = 24/38 (63%)
 Frame = +2

Query: 290 MVLVWCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIIL 403
           M   W   +RGG+A+E+   +L FN HP+ M+IG I L
Sbjct: 30  MTGAWLGLYRGGIAWES---DLQFNAHPLCMVIGLIFL 64

>CY561_HUMAN (P49447) Cytochrome b561 (Cytochrome b-561)|
          Length = 251

 Score = 33.9 bits (76), Expect = 0.095
 Identities = 17/38 (44%), Positives = 24/38 (63%)
 Frame = +2

Query: 290 MVLVWCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIIL 403
           M   W   +RGG+A+E+   +L FN HP+ M+IG I L
Sbjct: 30  MTGAWLGLYRGGIAWES---DLQFNAHPLCMVIGLIFL 64

>5HT2C_RAT (P08909) 5-hydroxytryptamine 2C receptor (5-HT-2C) (Serotonin|
           receptor 2C) (5-HT2C) (5-HTR2C) (5HT-1C)
          Length = 460

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 4/95 (4%)
 Frame = +2

Query: 134 GRECAAPAPTGDQRKKKKEEDAGVRGEMAIALGVKATPFTYTXXXXXXXXXXMVLVWCIH 313
           G E  AP P  DQ+ ++K+++   RG M      K                  +++WC  
Sbjct: 275 GEEENAPNPNPDQKPRRKKKEKRPRGTMQAINNEKK-----ASKVLGIVFFVFLIMWCPF 329

Query: 314 F----RGGLAFEAANKNLIFNVHPVLMLIGFIILG 406
           F       L  +A N+ L+  +  V + IG++  G
Sbjct: 330 FITNILSVLCGKACNQKLMEKLLNVFVWIGYVCSG 364

>SCND2_HUMAN (Q9GZW5) SCAN domain-containing protein 2|
          Length = 306

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
 Frame = +1

Query: 1   KAKAKTRLSSRCSPLQAARRTHATPPSPAFRRTSAE----ASCF*HAGRQRVCCA 153
           + + + R S R  P Q       T   PA R  ++E    ASC   AGR R CCA
Sbjct: 131 RLEPRARPSGRTPPAQLRSPWPMTAAGPASRARASETGSTASC---AGRWRTCCA 182

>LONH2_METTH (O26978) Putative protease La homolog type 2 (EC 3.4.21.-)|
          Length = 501

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -3

Query: 379 KNRVDVEDEVL-VGRLEGEAAAEVDAPD 299
           KNR ++EDE+L + R EGE      APD
Sbjct: 94  KNRKEIEDEILEIERAEGELIDPQSAPD 121

>5HT2C_MOUSE (P34968) 5-hydroxytryptamine 2C receptor (5-HT-2C) (Serotonin|
           receptor 2C) (5-HT2C) (5-HTR2C) (5HT-1C)
          Length = 459

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 4/90 (4%)
 Frame = +2

Query: 149 APAPTGDQRKKKKEEDAGVRGEMAIALGVKATPFTYTXXXXXXXXXXMVLVWCIHF---- 316
           AP P  DQ+ ++K+++   RG M      K                  +++WC  F    
Sbjct: 279 APNPNPDQKPRRKKKEKRPRGTMQAINNEKK-----ASKVLGIVFFVFLIMWCPFFITNI 333

Query: 317 RGGLAFEAANKNLIFNVHPVLMLIGFIILG 406
              L  +A N+ L+  +  V + IG++  G
Sbjct: 334 LSVLCGKACNQKLMEKLLNVFVWIGYVCSG 363


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,467,098
Number of Sequences: 219361
Number of extensions: 609372
Number of successful extensions: 2239
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2234
length of database: 80,573,946
effective HSP length: 111
effective length of database: 56,224,875
effective search space used: 1349397000
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)