ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast04h03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC134933.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.39
2gb|AC137617.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.39
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.39
4emb|CR555306.1| Azoarcus sp. EbN1 complete genome 44 0.39
5gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare str... 44 0.39
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.39
8gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.39
9dbj|AK071955.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.39
10gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome 42 1.5
11gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome 42 1.5
12emb|AL935261.1| Lactobacillus plantarum strain WCFS1 complete ge... 42 1.5
13gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete ge... 42 1.5
14ref|XM_475628.1| Oryza sativa (japonica cultivar-group), predic... 40 6.0
15gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 6.0
16gb|AC119288.4| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
17gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold 40 6.0
18ref|NM_008058.1| Mus musculus frizzled homolog 8 (Drosophila) (F... 40 6.0
19gb|AC108777.7| Mus musculus chromosome 18, clone RP23-368H22, co... 40 6.0
20gb|AC137614.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
21gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 6.0
22gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
23ref|XM_950730.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.0
24ref|XM_327533.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.0
25gb|AC139579.3| Mus musculus BAC clone RP23-139E6 from chromosome... 40 6.0
26gb|BC039165.1| Mus musculus frizzled homolog 8 (Drosophila), mRN... 40 6.0
27gb|BC100088.1| Rattus norvegicus similar to transmembrane recept... 40 6.0
28gb|AC104276.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
29gb|U00096.2| Escherichia coli K-12 MG1655, complete genome 40 6.0
30ref|XM_966106.1| PREDICTED: Tribolium castaneum similar to timel... 40 6.0
31gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 6.0
32emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete ... 40 6.0
33emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete ... 40 6.0
34dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome 40 6.0
35gb|AC146740.3| Callithrix jacchus clone CH259-204H2, complete se... 40 6.0
36gb|S80634.1| injury-inducible gene {ID repetitive element, clone... 40 6.0
37gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 6.0
38gb|AE006470.1| Chlorobium tepidum TLS, complete genome 40 6.0
39dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
40ref|XM_344616.2| PREDICTED: Rattus norvegicus similar to transme... 40 6.0
41dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 6.0
42emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 6.0
43gb|U43321.1|MMU43321 Mus musculus putative transmembrane recepto... 40 6.0
44gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
45emb|AL824706.8| Mouse DNA sequence from clone RP23-218A4 on chro... 40 6.0
46emb|AL713952.3|CNS07YPX Oryza sativa chromosome 12, . BAC OJ1618... 40 6.0
47dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 6.0
48gb|U70214.1|ECU70214 Escherichia coli chromosome minutes 4-6 40 6.0
49gb|L34880.1|STMDAUABCE Streptomyces sp. aklaviketone reductase (... 40 6.0
50emb|AL808127.4| Mouse DNA sequence from clone RP23-263L18 on chr... 40 6.0 
>gb|AC134933.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0579A05,
             complete sequence
          Length = 107407

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 245   ctccctgcccgcgacctgttcgacgttttgcctc 278
             |||| ||||||||||||||||| || ||||||||
Sbjct: 27956 ctccgtgcccgcgacctgttcggcgctttgcctc 27989
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>gb|AC137617.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0084P24,
              complete sequence
          Length = 148784

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 245    ctccctgcccgcgacctgttcgacgttttgcctc 278
              |||| ||||||||||||||||| || ||||||||
Sbjct: 132638 ctccgtgcccgcgacctgttcggcgctttgcctc 132671
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                 
Query: 245     ctccctgcccgcgacctgttcgacgttttgcctc 278
               |||| ||||||||||||||||| || ||||||||
Sbjct: 9380268 ctccatgcccgcgacctgttcggcgctttgcctc 9380301
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 425     gctggtgatcggcggcgggccg 446
               ||||||||||||||||||||||
Sbjct: 1175079 gctggtgatcggcggcgggccg 1175100
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>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0002D01, from chromosome 3, complete sequence
          Length = 187589

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 245   ctccctgcccgcgacctgttcgacgttttgcctc 278
             |||| ||||||||||||||||| || ||||||||
Sbjct: 77668 ctccatgcccgcgacctgttcggcgctttgcctc 77701
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 245      ctccctgcccgcgacctgttcgacgttttgcctc 278
                |||| ||||||||||||||||| || ||||||||
Sbjct: 20294366 ctccgtgcccgcgacctgttcggcgctttgcctc 20294399



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 250     tgcccgcgacctgttcgacg 269
               ||||||||||||||||||||
Sbjct: 4588178 tgcccgcgacctgttcgacg 4588159



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 427     tggtgatcggcggcgggccg 446
               ||||||||||||||||||||
Sbjct: 3466521 tggtgatcggcggcgggccg 3466540
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                 
Query: 245     ctccctgcccgcgacctgttcgacgttttgcctc 278
               |||| ||||||||||||||||| || ||||||||
Sbjct: 9378389 ctccatgcccgcgacctgttcggcgctttgcctc 9378422
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 371     cgcgctcgccgcgcgcgcccgg 392
               ||||||||||||||||||||||
Sbjct: 1173974 cgcgctcgccgcgcgcgcccgg 1173953



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 402     gcgagcgatcccaaggccggc 422
               |||||||||||||||||||||
Sbjct: 4167239 gcgagcgatcccaaggccggc 4167219
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>dbj|AK071955.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013081M10, full
           insert sequence
          Length = 1450

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 245 ctccctgcccgcgacctgttcgacgttttgcctc 278
           |||| ||||||||||||||||| || ||||||||
Sbjct: 270 ctccgtgcccgcgacctgttcggcgctttgcctc 303
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>gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome
          Length = 1796226

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 119     tcccgtaccaaattcgtaagc 139
               |||||||||||||||||||||
Sbjct: 1485450 tcccgtaccaaattcgtaagc 1485430
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>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 328     tcagcttcggctcttgcccgc 348
               |||||||||||||||||||||
Sbjct: 2697113 tcagcttcggctcttgcccgc 2697133
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>emb|AL935261.1| Lactobacillus plantarum strain WCFS1 complete genome; segment 10/11
          Length = 298050

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 119    tcccgtaccaaattcgtaagc 139
              |||||||||||||||||||||
Sbjct: 168011 tcccgtaccaaattcgtaagc 167991
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>gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete genome
          Length = 1796846

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 119     tcccgtaccaaattcgtaagc 139
               |||||||||||||||||||||
Sbjct: 1477705 tcccgtaccaaattcgtaagc 1477685
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>ref|XM_475628.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1509

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 427 tggtgatcggcggcgggccg 446
           ||||||||||||||||||||
Sbjct: 125 tggtgatcggcggcgggccg 144
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 372     gcgctcgccgcgcgcgcccg 391
               ||||||||||||||||||||
Sbjct: 2649544 gcgctcgccgcgcgcgcccg 2649563
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>gb|AC119288.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0017J22, complete sequence
          Length = 177153

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 427   tggtgatcggcggcgggccg 446
             ||||||||||||||||||||
Sbjct: 96003 tggtgatcggcggcgggccg 96022
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>gb|DP000014.1| Callithrix jacchus target 1 genomic scaffold
          Length = 1952403

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 39    caaaagcaaatatactatctcccc 62
             |||||||||||||||| |||||||
Sbjct: 56280 caaaagcaaatatactttctcccc 56303
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>ref|NM_008058.1| Mus musculus frizzled homolog 8 (Drosophila) (Fzd8), mRNA
          Length = 2058

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 375  ctcgccgcgcgcgcccgggc 394
            ||||||||||||||||||||
Sbjct: 1119 ctcgccgcgcgcgcccgggc 1100
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>gb|AC108777.7| Mus musculus chromosome 18, clone RP23-368H22, complete sequence
          Length = 216024

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 375    ctcgccgcgcgcgcccgggc 394
              ||||||||||||||||||||
Sbjct: 112181 ctcgccgcgcgcgcccgggc 112162
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>gb|AC137614.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0034O12, complete sequence
          Length = 156263

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 427   tggtgatcggcggcgggccg 446
             ||||||||||||||||||||
Sbjct: 32152 tggtgatcggcggcgggccg 32171
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 370     ccgcgctcgccgcgcgcgcc 389
               ||||||||||||||||||||
Sbjct: 3335972 ccgcgctcgccgcgcgcgcc 3335991
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>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0029B02, complete sequence
          Length = 156649

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 250   tgcccgcgacctgttcgacg 269
             ||||||||||||||||||||
Sbjct: 98645 tgcccgcgacctgttcgacg 98626
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>ref|XM_950730.1| Neurospora crassa OR74A hypothetical protein (NCU07248.1) partial
           mRNA
          Length = 2079

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 115 cgaatcccgtaccaaattcg 134
           ||||||||||||||||||||
Sbjct: 983 cgaatcccgtaccaaattcg 964
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>ref|XM_327533.1| Neurospora crassa OR74A hypothetical protein (NCU07248.1) partial
           mRNA
          Length = 2079

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 115 cgaatcccgtaccaaattcg 134
           ||||||||||||||||||||
Sbjct: 983 cgaatcccgtaccaaattcg 964
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>gb|AC139579.3| Mus musculus BAC clone RP23-139E6 from chromosome 7, complete sequence
          Length = 194033

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 49    tatactatctccccaaccccaagc 72
             |||||| |||||||||||||||||
Sbjct: 90610 tatactctctccccaaccccaagc 90633
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>gb|BC039165.1| Mus musculus frizzled homolog 8 (Drosophila), mRNA (cDNA clone
           IMAGE:3992722), with apparent retained intron
          Length = 2694

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 375 ctcgccgcgcgcgcccgggc 394
           ||||||||||||||||||||
Sbjct: 870 ctcgccgcgcgcgcccgggc 851
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>gb|BC100088.1| Rattus norvegicus similar to transmembrane receptor, mRNA (cDNA clone
            MGC:112790 IMAGE:7371338), complete cds
          Length = 3015

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 375  ctcgccgcgcgcgcccgggc 394
            ||||||||||||||||||||
Sbjct: 1359 ctcgccgcgcgcgcccgggc 1340
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>gb|AC104276.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1231_F08,
             complete sequence
          Length = 118049

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 427   tggtgatcggcggcgggccg 446
             ||||||||||||||||||||
Sbjct: 33803 tggtgatcggcggcgggccg 33822
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>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 427    tggtgatcggcggcgggccg 446
              ||||||||||||||||||||
Sbjct: 283917 tggtgatcggcggcgggccg 283936
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>ref|XM_966106.1| PREDICTED: Tribolium castaneum similar to timeless homolog
           (LOC659838), mRNA
          Length = 5136

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 256 cgacctgttcgacgttttgc 275
           ||||||||||||||||||||
Sbjct: 231 cgacctgttcgacgttttgc 250
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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 426     ctggtgatcggcggcgggcc 445
               ||||||||||||||||||||
Sbjct: 4494294 ctggtgatcggcggcgggcc 4494275
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>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29
          Length = 292200

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 148    gcggcatcggcggccaactg 167
              ||||||||||||||||||||
Sbjct: 126668 gcggcatcggcggccaactg 126649
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>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29
          Length = 311000

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 369   cccgcgctcgccgcgcgcgc 388
             ||||||||||||||||||||
Sbjct: 34283 cccgcgctcgccgcgcgcgc 34264
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>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 427    tggtgatcggcggcgggccg 446
              ||||||||||||||||||||
Sbjct: 283917 tggtgatcggcggcgggccg 283936
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>gb|AC146740.3| Callithrix jacchus clone CH259-204H2, complete sequence
          Length = 224361

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 39    caaaagcaaatatactatctcccc 62
             |||||||||||||||| |||||||
Sbjct: 56280 caaaagcaaatatactttctcccc 56303
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>gb|S80634.1| injury-inducible gene {ID repetitive element, clone CD105} [rats,
          sciatic nerve distal stumps, mRNA Partial, 102 nt]
          Length = 102

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 58 tccccaaccccaagcacaca 77
          ||||||||||||||||||||
Sbjct: 38 tccccaaccccaagcacaca 19
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 427     tggtgatcggcggcgggccg 446
               ||||||||||||||||||||
Sbjct: 4949416 tggtgatcggcggcgggccg 4949397
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>gb|AE006470.1| Chlorobium tepidum TLS, complete genome
          Length = 2154946

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 417   gccggccggctggtgatcggcggc 440
             |||| |||||||||||||||||||
Sbjct: 96348 gccgaccggctggtgatcggcggc 96371
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 258     acctgttcgacgttttgcct 277
               ||||||||||||||||||||
Sbjct: 5902967 acctgttcgacgttttgcct 5902986
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>ref|XM_344616.2| PREDICTED: Rattus norvegicus similar to transmembrane receptor
            (LOC364754), mRNA
          Length = 3438

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 375  ctcgccgcgcgcgcccgggc 394
            ||||||||||||||||||||
Sbjct: 1578 ctcgccgcgcgcgcccgggc 1559
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 425     gctggtgatcggcggcgggccgcg 448
               |||||||||||||||||| |||||
Sbjct: 8709889 gctggtgatcggcggcggaccgcg 8709912
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 370     ccgcgctcgccgcgcgcgcc 389
               ||||||||||||||||||||
Sbjct: 2198314 ccgcgctcgccgcgcgcgcc 2198333
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>gb|U43321.1|MMU43321 Mus musculus putative transmembrane receptor (frizzled 8) gene,
            complete cds
          Length = 2421

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 375  ctcgccgcgcgcgcccgggc 394
            ||||||||||||||||||||
Sbjct: 1306 ctcgccgcgcgcgcccgggc 1287
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 258     acctgttcgacgttttgcct 277
               ||||||||||||||||||||
Sbjct: 5902960 acctgttcgacgttttgcct 5902979
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>emb|AL824706.8| Mouse DNA sequence from clone RP23-218A4 on chromosome 4, complete
             sequence
          Length = 207687

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 191   aaagaggaccagaagccaag 210
             ||||||||||||||||||||
Sbjct: 70065 aaagaggaccagaagccaag 70046
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>emb|AL713952.3|CNS07YPX Oryza sativa chromosome 12, . BAC OJ1618_C05 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 169662

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 258   acctgttcgacgttttgcct 277
             ||||||||||||||||||||
Sbjct: 98612 acctgttcgacgttttgcct 98631
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 425     gctggtgatcggcggcgggc 444
               ||||||||||||||||||||
Sbjct: 2124307 gctggtgatcggcggcgggc 2124288
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>gb|U70214.1|ECU70214 Escherichia coli chromosome minutes 4-6
          Length = 123171

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 427    tggtgatcggcggcgggccg 446
              ||||||||||||||||||||
Sbjct: 114991 tggtgatcggcggcgggccg 115010
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>gb|L34880.1|STMDAUABCE Streptomyces sp. aklaviketone reductase (dauE) gene;
            cyclase/dehydrase (dauA) gene; polyketide reductase
            (dauB) gene; oxygenase, polyketide synthase,
            acyltransferase (dauA) genes; aklanonic acid
            methyltransferase (dauC) gene
          Length = 8089

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 373  cgctcgccgcgcgcgcccgggcactgcg 400
            |||||||||||  |||||||||||||||
Sbjct: 6840 cgctcgccgcggtcgcccgggcactgcg 6867
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>emb|AL808127.4| Mouse DNA sequence from clone RP23-263L18 on chromosome 2, complete
              sequence
          Length = 205838

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 278    caaacgagcagagcacccca 297
              ||||||||||||||||||||
Sbjct: 140698 caaacgagcagagcacccca 140679


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,697,731
Number of Sequences: 3902068
Number of extensions: 2697731
Number of successful extensions: 59156
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57143
Number of HSP's gapped (non-prelim): 2013
length of query: 448
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 426
effective length of database: 17,147,199,772
effective search space: 7304707102872
effective search space used: 7304707102872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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