Clone Information

BLAST Search Result

Clone Name	bast04g09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	KCND3_RAT (Q62897) Potassium voltage-gated channel subfamily D m...	32	0.28
2	KCND3_MOUSE (Q9Z0V1) Potassium voltage-gated channel subfamily D...	32	0.28
3	KCND3_HUMAN (Q9UK17) Potassium voltage-gated channel subfamily D...	32	0.28
4	WASL_HUMAN (O00401) Neural Wiskott-Aldrich syndrome protein (N-W...	32	0.28
5	KCND3_RABIT (Q9TTT5) Potassium voltage-gated channel subfamily D...	32	0.37
6	NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Si...	32	0.37
7	ZIPA_SALTY (P0A2N6) Cell division protein zipA homolog	31	0.62
8	ZIPA_SALTI (P0A2N7) Cell division protein zipA homolog	31	0.62
9	WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-W...	31	0.81
10	FASTK_HUMAN (Q14296) Fas-activated serine/threonine kinase (EC 2...	30	1.1
11	WASL_RAT (O08816) Neural Wiskott-Aldrich syndrome protein (N-WASP)	30	1.1
12	WASL_MOUSE (Q91YD9) Neural Wiskott-Aldrich syndrome protein (N-W...	30	1.1
13	SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1...	30	1.4
14	SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1	30	1.4
15	OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)	30	1.8
16	EFHD1_HUMAN (Q9BUP0) EF-hand domain-containing protein 1 (Swipro...	29	2.4
17	PKAA_STRCO (P54739) Serine/threonine protein kinase pkaA (EC 2.7...	29	2.4
18	SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1...	29	2.4
19	MYSC_ACACA (P10569) Myosin IC heavy chain	29	3.1
20	MYST3_HUMAN (Q92794) Histone acetyltransferase MYST3 (EC 2.3.1.4...	29	3.1
21	STNB_DROME (Q24212) Protein stoned-B (StonedB) (Stn-B)	29	3.1
22	LAS17_YEAST (Q12446) Proline-rich protein LAS17	29	3.1
23	JPH2_RABIT (Q9GKY7) Junctophilin-2 (Junctophilin type 2) (JP-2)	28	4.0
24	LCP2_HUMAN (Q13094) Lymphocyte cytosolic protein 2 (SH2 domain-c...	28	4.0
25	SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1	28	4.0
26	PCLO_RAT (Q9JKS6) Protein piccolo (Aczonin) (Multidomain presyna...	28	5.3
27	RFIP1_HUMAN (Q6WKZ4) Rab11 family-interacting protein 1 (Rab11-F...	28	5.3
28	NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)	28	5.3
29	ZN541_HUMAN (Q9H0D2) Zinc finger protein 541	28	5.3
30	ANTR1_HUMAN (Q9H6X2) Anthrax toxin receptor 1 precursor (Tumor e...	28	5.3
31	ANTR1_MOUSE (Q9CZ52) Anthrax toxin receptor 1 precursor (Tumor e...	28	5.3
32	RGS3_RAT (P49797) Regulator of G-protein signaling 3 (RGS3) (SRB...	28	5.3
33	MBD6_HUMAN (Q96DN6) Methyl-CpG-binding domain protein 6 (Methyl-...	28	5.3
34	YAP1_HUMAN (P46937) 65 kDa Yes-associated protein (YAP65)	28	5.3
35	PRB3_HUMAN (Q04118) Basic salivary proline-rich protein 3 precur...	28	6.9
36	SCND2_HUMAN (Q9GZW5) SCAN domain-containing protein 2	28	6.9
37	MBD1_HUMAN (Q9UIS9) Methyl-CpG-binding domain protein 1 (Methyl-...	28	6.9
38	CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48)	28	6.9
39	EXTN_SORBI (P24152) Extensin precursor (Proline-rich glycoprotein)	28	6.9
40	SYN3_RAT (O70441) Synapsin-3 (Synapsin III)	27	9.0
41	SYN3_MOUSE (Q8JZP2) Synapsin-3 (Synapsin III)	27	9.0
42	LTBP2_RAT (O35806) Latent transforming growth factor beta-bindin...	27	9.0
43	RGS3_MOUSE (Q9DC04) Regulator of G-protein signaling 3 (RGS3) (C...	27	9.0
44	PCLO_MOUSE (Q9QYX7) Protein piccolo (Aczonin) (Multidomain presy...	27	9.0
45	CUD1_SCHGR (Q7M4F4) Endocuticle structural glycoprotein SgAbd-1	27	9.0
46	UL51_PRVKA (Q85227) Protein UL51	27	9.0
47	RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats pro...	27	9.0

>KCND3_RAT (Q62897) Potassium voltage-gated channel subfamily D member 3|
           (Voltage-gated potassium channel subunit Kv4.3)
          Length = 655

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -2

Query: 373 LPCPPRRAPQGQGAPPPRSRHPTARLPT 290
           +P PP   P+G+  PPP S  P   +P+
Sbjct: 617 IPTPPALTPEGESRPPPASPGPNTNIPS 644

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>KCND3_MOUSE (Q9Z0V1) Potassium voltage-gated channel subfamily D member 3|
           (Voltage-gated potassium channel subunit Kv4.3)
          Length = 655

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -2

Query: 373 LPCPPRRAPQGQGAPPPRSRHPTARLPT 290
           +P PP   P+G+  PPP S  P   +P+
Sbjct: 617 IPTPPALTPEGESRPPPASPGPNTNIPS 644

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>KCND3_HUMAN (Q9UK17) Potassium voltage-gated channel subfamily D member 3|
           (Voltage-gated potassium channel subunit Kv4.3)
          Length = 655

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -2

Query: 373 LPCPPRRAPQGQGAPPPRSRHPTARLPT 290
           +P PP   P+G+  PPP S  P   +P+
Sbjct: 617 IPTPPALTPEGESRPPPASPGPNTNIPS 644

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>WASL_HUMAN (O00401) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 505

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = -2

Query: 394 PSRRESRLPCPPRRAPQGQGAPPPRSRHPTARLPTP 287
           P+R     P PP RAP     PPP SR P+  +P P
Sbjct: 303 PARGRGAPPPPPSRAPTAAPPPPPPSR-PSVAVPPP 337



 Score = 30.4 bits (67), Expect = 1.1
 Identities = 19/37 (51%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -2

Query: 394 PSRRESRLPCPPRRAPQGQGA-PPPRSRHPTARLPTP 287
           P    S  P PP R   G+GA PPP SR PTA  P P
Sbjct: 292 PPPHNSGPPPPPAR---GRGAPPPPPSRAPTAAPPPP 325



 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = -2

Query: 370 PCPPRRAPQGQGAPPPRSRHPTARLPTPS 284
           P PP   P   G PPP +R   A  P PS
Sbjct: 287 PPPPPPPPHNSGPPPPPARGRGAPPPPPS 315

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>KCND3_RABIT (Q9TTT5) Potassium voltage-gated channel subfamily D member 3|
           (Voltage-gated potassium channel subunit Kv4.3)
          Length = 655

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -2

Query: 373 LPCPPRRAPQGQGAPPPRSRHPTARLPT 290
           +P PP   P+G+  PPP S  P   +P+
Sbjct: 617 IPAPPALTPEGETRPPPASPGPNTNIPS 644

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>NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Silencing|
           mediator of retinoic acid and thyroid hormone receptor)
           (SMRT) (SMRTe) (Thyroid-,
           retinoic-acid-receptor-associated corepressor) (T3
           receptor-associating factor) (TRAC) (CTG repeat p
          Length = 2517

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 15/36 (41%), Positives = 17/36 (47%)
 Frame = -2

Query: 394 PSRRESRLPCPPRRAPQGQGAPPPRSRHPTARLPTP 287
           P RR SR P  P  A +  GAP P    P+   P P
Sbjct: 785 PPRRTSRAPIEPTPASEATGAPTPPPAPPSPSAPPP 820

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>ZIPA_SALTY (P0A2N6) Cell division protein zipA homolog|
          Length = 328

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -2

Query: 394 PSRRESRLPCPPRRAPQGQGAPPPRSRHPTAR-LPTPSAQ 278
           P  ++ +   PP + PQ Q APP ++  P A+  P PSAQ
Sbjct: 125 PQPQQVQPSAPPVQPPQQQPAPPSQAPQPVAQPAPPPSAQ 164

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>ZIPA_SALTI (P0A2N7) Cell division protein zipA homolog|
          Length = 328

 Score = 31.2 bits (69), Expect = 0.62
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -2

Query: 394 PSRRESRLPCPPRRAPQGQGAPPPRSRHPTAR-LPTPSAQ 278
           P  ++ +   PP + PQ Q APP ++  P A+  P PSAQ
Sbjct: 125 PQPQQVQPSAPPVQPPQQQPAPPSQAPQPVAQPAPPPSAQ 164

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>WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 505

 Score = 30.8 bits (68), Expect = 0.81
 Identities = 15/36 (41%), Positives = 16/36 (44%)
 Frame = -2

Query: 394 PSRRESRLPCPPRRAPQGQGAPPPRSRHPTARLPTP 287
           P+R     P PP RAP     PPP SR      P P
Sbjct: 303 PARGRGAPPPPPSRAPTAAPPPPPPSRPGVGAPPPP 338



 Score = 30.4 bits (67), Expect = 1.1
 Identities = 19/37 (51%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -2

Query: 394 PSRRESRLPCPPRRAPQGQGA-PPPRSRHPTARLPTP 287
           P    S  P PP R   G+GA PPP SR PTA  P P
Sbjct: 292 PPPHSSGPPPPPAR---GRGAPPPPPSRAPTAAPPPP 325



 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = -2

Query: 370 PCPPRRAPQGQGAPPPRSRHPTARLPTPS 284
           P PP   P   G PPP +R   A  P PS
Sbjct: 287 PPPPPPPPHSSGPPPPPARGRGAPPPPPS 315

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>FASTK_HUMAN (Q14296) Fas-activated serine/threonine kinase (EC 2.7.11.8) (FAST|
           kinase)
          Length = 549

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -2

Query: 373 LPCPPRRAPQGQGAPPPRSRHPTARL 296
           LP PPR  PQGQ A    +R P  R+
Sbjct: 452 LPYPPRSCPQGQAASSATTRDPAQRV 477

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>WASL_RAT (O08816) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 501

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = -2

Query: 394 PSRRESRLPCPPRRAPQGQGAPPPRSRHPTARLPTP 287
           P+R     P PP RAP     PPP SR P   +P P
Sbjct: 300 PARGRGAPPPPPSRAPTAAPPPPPPSR-PGVVVPPP 334



 Score = 30.4 bits (67), Expect = 1.1
 Identities = 19/37 (51%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -2

Query: 394 PSRRESRLPCPPRRAPQGQGA-PPPRSRHPTARLPTP 287
           P    S  P PP R   G+GA PPP SR PTA  P P
Sbjct: 289 PPPHSSGPPPPPAR---GRGAPPPPPSRAPTAAPPPP 322



 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = -2

Query: 370 PCPPRRAPQGQGAPPPRSRHPTARLPTPS 284
           P PP   P   G PPP +R   A  P PS
Sbjct: 284 PPPPPPPPHSSGPPPPPARGRGAPPPPPS 312

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>WASL_MOUSE (Q91YD9) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 501

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = -2

Query: 394 PSRRESRLPCPPRRAPQGQGAPPPRSRHPTARLPTP 287
           P+R     P PP RAP     PPP SR P   +P P
Sbjct: 300 PARGRGAPPPPPSRAPTAAPPPPPPSR-PGVVVPPP 334



 Score = 30.4 bits (67), Expect = 1.1
 Identities = 19/37 (51%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -2

Query: 394 PSRRESRLPCPPRRAPQGQGA-PPPRSRHPTARLPTP 287
           P    S  P PP R   G+GA PPP SR PTA  P P
Sbjct: 289 PPPHSSGPPPPPAR---GRGAPPPPPSRAPTAAPPPP 322



 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = -2

Query: 370 PCPPRRAPQGQGAPPPRSRHPTARLPTPS 284
           P PP   P   G PPP +R   A  P PS
Sbjct: 284 PPPPPPPPHSSGPPPPPARGRGAPPPPPS 312

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>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1|
           (Ser/Arg-related nuclear matrix protein) (SR-related
           nuclear matrix protein of 160 kDa) (SRm160)
          Length = 904

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
 Frame = -2

Query: 394 PSRRES--RLPCPPRRAPQGQGAPPP---RSRHPTARLPTPSAQXXXXXXXXXXXRTA*G 230
           P RR S  R P P RR P  +  PPP   RSR P  R    SA                 
Sbjct: 311 PRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSS------- 363

Query: 229 YFSAQTSSPP 200
             S+++ SPP
Sbjct: 364 --SSRSRSPP 371



 Score = 28.9 bits (63), Expect = 3.1
 Identities = 18/38 (47%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
 Frame = -2

Query: 394 PSRRESRLPCPP--RRAPQGQGAPPPRSRHPTARLPTP 287
           P  R  R P PP  RR      APPPR R    R PTP
Sbjct: 542 PRGRRRRSPSPPPTRRRRSPSPAPPPRRR----RTPTP 575



 Score = 28.5 bits (62), Expect = 4.0
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 8/45 (17%)
 Frame = -2

Query: 388 RRESRLPCPP---RRAP-----QGQGAPPPRSRHPTARLPTPSAQ 278
           RR S  P PP   RR P     +   +PPPR R P+ R  +P  Q
Sbjct: 557 RRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQ 601



 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = -2

Query: 391 SRRESRLPCPPRRA--PQGQGAPPPRSRHPTARLPTP 287
           +RR S    PPRR   P     PPP++RH     PTP
Sbjct: 385 TRRLSPSASPPRRRHRPSPPATPPPKTRHS----PTP 417



 Score = 27.3 bits (59), Expect = 9.0
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 5/44 (11%)
 Frame = -2

Query: 394 PSRRESRLPCPPRRAPQGQGAPPPRSRHPTA-----RLPTPSAQ 278
           P++R S  P P  RAPQ   +PPP  R  ++     + P+PS +
Sbjct: 678 PNKRHS--PSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTR 719

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>SRRM1_PONPY (Q5R5Q2) Serine/arginine repetitive matrix protein 1|
          Length = 917

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
 Frame = -2

Query: 394 PSRRES--RLPCPPRRAPQGQGAPPP---RSRHPTARLPTPSAQXXXXXXXXXXXRTA*G 230
           P RR S  R P P RR P  +  PPP   RSR P  R    SA                 
Sbjct: 311 PRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSS------- 363

Query: 229 YFSAQTSSPP 200
             S+++ SPP
Sbjct: 364 --SSRSRSPP 371



 Score = 28.5 bits (62), Expect = 4.0
 Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 8/45 (17%)
 Frame = -2

Query: 388 RRESRLPCPP---RRAP-----QGQGAPPPRSRHPTARLPTPSAQ 278
           RR S  P PP   RR P     +   +PPPR R P+ R  +P  Q
Sbjct: 571 RRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQ 615



 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/37 (48%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = -2

Query: 391 SRRESRLPCPP--RRAPQGQGAPPPRSRHPTARLPTP 287
           S R  R P PP  RR      APPPR R    R PTP
Sbjct: 557 SGRRRRSPSPPPTRRRRSPSPAPPPRRR----RTPTP 589



 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = -2

Query: 391 SRRESRLPCPPRRA--PQGQGAPPPRSRHPTARLPTP 287
           +RR S    PPRR   P     PPP++RH     PTP
Sbjct: 385 TRRLSPSASPPRRRHRPSPPATPPPKTRHS----PTP 417

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>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)|
          Length = 2716

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 19/66 (28%), Positives = 25/66 (37%)
 Frame = -2

Query: 394 PSRRESRLPCPPRRAPQGQGAPPPRSRHPTARLPTPSAQXXXXXXXXXXXRTA*GYFSAQ 215
           P+  +S    P ++ P G G PPP   HP      P  Q            +A    S Q
Sbjct: 537 PASNQSSSGGPMQQPPVGAGGPPPMPPHPGMPGGPPQQQQSQQQQASNSASSASN--SPQ 594

Query: 214 TSSPPA 197
            + PPA
Sbjct: 595 QTPPPA 600

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>EFHD1_HUMAN (Q9BUP0) EF-hand domain-containing protein 1 (Swiprosin-2)|
          Length = 239

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -2

Query: 388 RRESRLPCPPRRAPQGQGAPPPRSR-HPTARLPTPSA 281
           RRE      P+ AP G  AP P+    P AR PT SA
Sbjct: 15  RREEAEESGPQLAPLGAPAPEPKPEPEPPARAPTASA 51

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>PKAA_STRCO (P54739) Serine/threonine protein kinase pkaA (EC 2.7.11.1)|
          Length = 543

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
 Frame = -2

Query: 394 PSRRESRLPCPPRRAPQGQGAPPPRSRHPTARLP----TPSAQ 278
           P R+ SR P  PR+APQG     P   +P  + P    TP  Q
Sbjct: 405 PQRQVSRPPQQPRQAPQGPPPQQPGYGYPQQQQPQRYATPQPQ 447

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>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
 Frame = -2

Query: 394 PSRRES--RLPCPPRRAPQGQGAPPP---RSRHPTARLPTPSAQXXXXXXXXXXXRTA*G 230
           P RR S  R P P RR P  +  PPP   RSR P  R    SA                 
Sbjct: 309 PRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPGRRRRRSSASLSGSSSSSS------- 361

Query: 229 YFSAQTSSPP 200
             S+++ SPP
Sbjct: 362 --SSRSRSPP 369



 Score = 28.5 bits (62), Expect = 4.0
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = -2

Query: 391 SRRESRLPCPPRRA--PQGQGAPPPRSRHPTARLPTP 287
           +RR S    PPRR   P     PPP++RH     PTP
Sbjct: 383 TRRLSPSASPPRRRHRPSSPATPPPKTRHS----PTP 415

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>MYSC_ACACA (P10569) Myosin IC heavy chain|
          Length = 1168

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -2

Query: 373  LPCPPRRAPQGQGAPPPRSRHP 308
            +P P   AP+G+GAPPP +  P
Sbjct: 1100 MPAPGGAAPRGRGAPPPGAGGP 1121

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>MYST3_HUMAN (Q92794) Histone acetyltransferase MYST3 (EC 2.3.1.48) (EC 2.3.1.-)|
            (MYST protein 3) (MOZ, YBF2/SAS3, SAS2 and TIP60 protein
            3) (Runt-related transcription factor-binding protein 2)
            (Monocytic leukemia zinc finger protein) (Zinc finger
            protei
          Length = 2004

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -2

Query: 394  PSRRESRLPCPPRRAPQGQGAPPPRSRHPTARLPTPSAQ 278
            PS ++ + P PP + PQ    PPP    P  + P P  Q
Sbjct: 1644 PSNQQQQPPPPPPQQPQ----PPPPQPQPAPQPPPPQQQ 1678

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>STNB_DROME (Q24212) Protein stoned-B (StonedB) (Stn-B)|
          Length = 1262

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 17/38 (44%), Positives = 18/38 (47%)
 Frame = -2

Query: 394 PSRRESRLPCPPRRAPQGQGAPPPRSRHPTARLPTPSA 281
           P R     P PPR AP GQ A P R   P A +  P A
Sbjct: 235 PPRPPPPRPAPPRPAPPGQAA-PQRPPPPLAAVNPPPA 271

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>LAS17_YEAST (Q12446) Proline-rich protein LAS17|
          Length = 633

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -2

Query: 376 RLPCPPRRAPQGQGAPPPRSRHPTA 302
           RLP PP    +G   PPP  RH T+
Sbjct: 340 RLPAPPPPPRRGPAPPPPPHRHVTS 364

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>JPH2_RABIT (Q9GKY7) Junctophilin-2 (Junctophilin type 2) (JP-2)|
          Length = 694

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 9/47 (19%)
 Frame = -2

Query: 394 PSRRESRLPCPPRRAPQ--------GQGAPP-PRSRHPTARLPTPSA 281
           P R  + LP PPR +PQ         +G PP P    P  + P P A
Sbjct: 452 PDRGAAGLPQPPRESPQLHERETPRPEGGPPSPAGTPPQPKRPRPGA 498

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>LCP2_HUMAN (Q13094) Lymphocyte cytosolic protein 2 (SH2 domain-containing|
           leucocyte protein of 76 kDa) (SLP-76 tyrosine
           phosphoprotein) (SLP76)
          Length = 533

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = -2

Query: 394 PSRRESRLPCPPRRAPQGQGAPPPRSR-HPTARLPTPS 284
           P    +  P PP   PQ     P RSR H TA+LP PS
Sbjct: 200 PPAGRNHSPLPP---PQTNHEEPSRSRNHKTAKLPAPS 234

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>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 7/44 (15%)
 Frame = -2

Query: 388 RRESRLPCPP---RRAP----QGQGAPPPRSRHPTARLPTPSAQ 278
           RR S  P PP   RR+P    +   +PPPR R P+ R  +P  Q
Sbjct: 551 RRRSPSPPPPPRRRRSPSLPRRRSPSPPPRRRSPSPRRYSPPIQ 594



 Score = 28.1 bits (61), Expect = 5.3
 Identities = 23/68 (33%), Positives = 27/68 (39%), Gaps = 3/68 (4%)
 Frame = -2

Query: 394 PSRRESRLPCPPRRAPQGQGAPPP---RSRHPTARLPTPSAQXXXXXXXXXXXRTA*GYF 224
           PS R  R P P RR P  +  PPP   RSR P  R    SA                   
Sbjct: 311 PSPR--RRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSS--------- 359

Query: 223 SAQTSSPP 200
           S+++ SPP
Sbjct: 360 SSRSRSPP 367



 Score = 27.3 bits (59), Expect = 9.0
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = -2

Query: 391 SRRESRLPCPPRRAPQGQGAPPPRSRHPTARLPTP 287
           SR   R     RR P  +  P PR R P  R+P P
Sbjct: 297 SRPRRRHRSRSRRRPSPRRRPSPRRRTPPRRMPPP 331

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>PCLO_RAT (Q9JKS6) Protein piccolo (Aczonin) (Multidomain presynaptic|
           cytomatrix protein)
          Length = 5085

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
 Frame = -2

Query: 394 PSRRESRLPCPPRRAPQGQGAP-----PPRSRHPTARLPTPS 284
           P   ES+ P  P++ P+ +  P     PP  + PT   PTP+
Sbjct: 629 PKALESKKPPEPKKPPEPKKPPEPKKPPPLVKQPTLHGPTPA 670

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>RFIP1_HUMAN (Q6WKZ4) Rab11 family-interacting protein 1 (Rab11-FIP1)|
           (Rab-coupling protein)
          Length = 1283

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 5/41 (12%)
 Frame = -2

Query: 391 SRRESRLPCPPRRAPQGQGAPP-----PRSRHPTARLPTPS 284
           S+ E R P    RAPQ +   P     P ++ PTARLP+P+
Sbjct: 519 SKSEPRPPISSPRAPQTRAVKPRLEVSPEAQ-PTARLPSPT 558

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>NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)|
          Length = 268

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = -2

Query: 394 PSRRESRLPCP-PRRAPQGQGAPPPRSRHPTARLPTPS 284
           PS   S  P P P  +P+    P PR R P +  P+PS
Sbjct: 163 PSPSPSPSPSPSPSPSPRSTPIPHPRKRSPASPSPSPS 200

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>ZN541_HUMAN (Q9H0D2) Zinc finger protein 541|
          Length = 792

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = -2

Query: 388 RRESRLPCPPRRAPQGQGAPPPRSRHPTARLPTPS 284
           R E ++PC PR  P         S HPT +L T S
Sbjct: 679 RTEEKVPCSPRERP---------SHHPTPKLKTKS 704

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>ANTR1_HUMAN (Q9H6X2) Anthrax toxin receptor 1 precursor (Tumor endothelial|
           marker 8)
          Length = 564

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = -2

Query: 394 PSRRESRLPCPPRRAPQGQGAPPPRSRHPTARLP 293
           PS     +P PP   P    APPP    P +R P
Sbjct: 526 PSAPTPPIPSPPSTLPPPPQAPPPNRAPPPSRPP 559

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>ANTR1_MOUSE (Q9CZ52) Anthrax toxin receptor 1 precursor (Tumor endothelial|
           marker 8)
          Length = 562

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = -2

Query: 394 PSRRESRLPCPPRRAPQGQGAPPPRSRHPTARLP 293
           PS     +P PP   P    APPP    P +R P
Sbjct: 524 PSAPTPPIPSPPSTLPPPPQAPPPNRAPPPSRPP 557

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>RGS3_RAT (P49797) Regulator of G-protein signaling 3 (RGS3) (SRB-RGS)|
          Length = 967

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -2

Query: 388 RRESRLPCPPRRAPQGQGAPPPRSRHPTARLP 293
           R  S+ P P +  P GQ  PP +   P+  LP
Sbjct: 422 RTPSKDPSPSQELPPGQELPPSKDPSPSQELP 453

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>MBD6_HUMAN (Q96DN6) Methyl-CpG-binding domain protein 6 (Methyl-CpG-binding|
           protein MBD6)
          Length = 1003

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/36 (38%), Positives = 17/36 (47%)
 Frame = -2

Query: 394 PSRRESRLPCPPRRAPQGQGAPPPRSRHPTARLPTP 287
           PS+R  R P    R  +G+G   PR   P A  P P
Sbjct: 361 PSQRRPRRPPTVFRLLEGRGPQTPRRSRPRAPAPVP 396

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>YAP1_HUMAN (P46937) 65 kDa Yes-associated protein (YAP65)|
          Length = 454

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 5/33 (15%)
 Frame = -2

Query: 364 PPRRAPQGQGAP---PPRSRHPTA--RLPTPSA 281
           PP+ APQGQG P   PP+ + P +    P P+A
Sbjct: 8   PPQPAPQGQGQPPSQPPQGQGPPSGPGQPAPAA 40

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>PRB3_HUMAN (Q04118) Basic salivary proline-rich protein 3 precursor (Parotid|
           salivary glycoprotein G1) (Proline-rich protein G1)
          Length = 309

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/29 (44%), Positives = 16/29 (55%)
 Frame = -2

Query: 364 PPRRAPQGQGAPPPRSRHPTARLPTPSAQ 278
           PP R PQG   PPP   +P   LP P+ +
Sbjct: 261 PPPRRPQG---PPPPGGNPQQPLPPPAGK 286

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>SCND2_HUMAN (Q9GZW5) SCAN domain-containing protein 2|
          Length = 306

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -2

Query: 394 PSRRESRLPCPPRRAPQGQGAPPPRSRHPTARLPTPSA 281
           P R+      PP   P+ + +P P  R P  RL  P A
Sbjct: 240 PGRQRGAGTAPPGTQPRQRPSPRPTPRRPRPRLARPRA 277

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>MBD1_HUMAN (Q9UIS9) Methyl-CpG-binding domain protein 1 (Methyl-CpG-binding|
           protein MBD1) (Protein containing methyl-CpG-binding
           domain 1)
          Length = 605

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = -2

Query: 388 RRESRLPCPPRRAPQGQGAPPPRSRHPTARLPTPSAQ 278
           RR    P PP   P    +P P   HP A  P+P A+
Sbjct: 282 RRPGAQPLPP---PPPSQSPEPTEPHPRALAPSPPAE 315

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>CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48)|
          Length = 2441

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 8/39 (20%)
 Frame = -2

Query: 379 SRLPCPPRRAPQGQGAPPPRS--------RHPTARLPTP 287
           S+LPCPP         PPP S        +HPTA   TP
Sbjct: 843 SQLPCPPVTQSPLHPTPPPASTAAGMPSLQHPTAPGMTP 881

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>EXTN_SORBI (P24152) Extensin precursor (Proline-rich glycoprotein)|
          Length = 283

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = -2

Query: 370 PCPPRRAPQGQGAPPPRSRHPTARLPTPS 284
           P PP   P  +  PPP +  PT    TPS
Sbjct: 69  PTPPTYTPSPKPTPPPATPKPTPPTYTPS 97

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>SYN3_RAT (O70441) Synapsin-3 (Synapsin III)|
          Length = 579

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -2

Query: 364 PPRRAP-QGQGAPPPRSRHPTARLPTPSAQ 278
           PP+  P Q Q   PPRSR P+ +  +P  Q
Sbjct: 436 PPQGGPRQAQSPQPPRSRSPSQQRLSPQGQ 465

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>SYN3_MOUSE (Q8JZP2) Synapsin-3 (Synapsin III)|
          Length = 579

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = -2

Query: 364 PPRRAP-QGQGAPPPRSRHPTARLPTPSAQ 278
           PP+  P Q Q   PPRSR P+ +  +P  Q
Sbjct: 436 PPQGGPRQAQSPQPPRSRSPSQQRLSPQGQ 465

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>LTBP2_RAT (O35806) Latent transforming growth factor beta-binding protein 2|
           precursor (LTBP-2)
          Length = 1764

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
 Frame = -2

Query: 394 PSR----RESRLPCPPRRA-PQGQGAPPPRSRHPTARLPTP 287
           PSR    R  + P   RR+ P+GQ  P  R+ H   RL TP
Sbjct: 106 PSRAQQLRRVQSPVQTRRSNPRGQQPPAARTAHSVVRLATP 146

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>RGS3_MOUSE (Q9DC04) Regulator of G-protein signaling 3 (RGS3) (C2PA)|
          Length = 966

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 379 SRLPCPPRRAPQGQGAPPPRSRHPTARLP 293
           S+ P P +  P GQ  PP +   P+  LP
Sbjct: 461 SKDPSPSQELPAGQDLPPSKDPSPSQELP 489



 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 379 SRLPCPPRRAPQGQGAPPPRSRHPTARLP 293
           S+ P P +  P GQ  PP +   P+  LP
Sbjct: 443 SKDPSPSQELPAGQDLPPSKDPSPSQELP 471



 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 379 SRLPCPPRRAPQGQGAPPPRSRHPTARLP 293
           S+ P P +  P GQ  PP +   P+  LP
Sbjct: 425 SKNPSPGQELPPGQDLPPSKDPSPSQELP 453

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>PCLO_MOUSE (Q9QYX7) Protein piccolo (Aczonin) (Multidomain presynaptic|
           cytomatrix protein) (Brain-derived HLMN protein)
          Length = 5038

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = -2

Query: 394 PSRRESRLPCPPRRAPQGQGAPPPRSRHPTARLPTPSAQ 278
           P + ++++   P   P  +G+P P    PT    TP +Q
Sbjct: 763 PKKAQTKVTPKPDTKPVPKGSPTPSGTRPTTGQATPQSQ 801

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>CUD1_SCHGR (Q7M4F4) Endocuticle structural glycoprotein SgAbd-1|
          Length = 184

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = -2

Query: 394 PSRRESRLPCPPRRAPQGQGAPPPRSRHPTARLPTPSAQ 278
           PS   SR P PP         PPPR   P+  LP P+ Q
Sbjct: 28  PSPPASRAPPPP---------PPPRPVVPSQPLPAPAPQ 57

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>UL51_PRVKA (Q85227) Protein UL51|
          Length = 236

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/32 (46%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
 Frame = -2

Query: 376 RLPCPPRRAPQGQGAPPPRSRHP--TARLPTP 287
           R P P R AP G G P P    P  TA  P P
Sbjct: 158 RQPAPVRAAPAGLGLPVPAQPAPRATAARPAP 189

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>RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats protein|
            (Atrophin-2)
          Length = 1558

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
 Frame = -2

Query: 373  LPCPPRRAP---QGQGAPPPRSRHPTARL 296
            LP  P + P   Q Q  PPP + HPT  L
Sbjct: 989  LPSSPAQPPGLTQSQSLPPPAASHPTTGL 1017


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,785,318
Number of Sequences: 219361
Number of extensions: 359626
Number of successful extensions: 3028
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 2068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2906
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 1370455656
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result