ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast04e08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1THRC_ARATH (Q9S7B5) Threonine synthase, chloroplast precursor (E... 104 1e-22
2THRC_SOLTU (Q9MT28) Threonine synthase, chloroplast precursor (E... 102 3e-22
3SI1L2_RAT (Q5JCS6) Signal-induced proliferation-associated 1-lik... 31 1.2
4SI1L2_MOUSE (Q80TE4) Signal-induced proliferation-associated 1-l... 31 1.2
5SI1L2_HUMAN (Q9P2F8) Signal-induced proliferation-associated 1-l... 31 1.2
6MFRP_HUMAN (Q9BY79) Membrane frizzled-related protein (Membrane-... 30 2.0
7HIS8_BACSU (P17731) Histidinol-phosphate aminotransferase (EC 2.... 29 5.8
8HIS8_BACNA (Q8KZ92) Histidinol-phosphate aminotransferase (EC 2.... 29 5.8
9DNAE2_NOCFA (Q5Z1D1) Error-prone DNA polymerase (EC 2.7.7.7) 28 7.6

>THRC_ARATH (Q9S7B5) Threonine synthase, chloroplast precursor (EC 4.2.3.1)|
           (TS)
          Length = 526

 Score =  104 bits (259), Expect = 1e-22
 Identities = 50/71 (70%), Positives = 55/71 (77%)
 Frame = +3

Query: 225 NDFSAWYEPFPPGPGSAADERYSLDEIVYRSSSGGLLDVRHDIAALARYPGSYWRDLFDS 404
           N FSA Y PF   PGS   E YSLDEIVYRS SGGLLDV HD+ AL R+ G+YWRDLFDS
Sbjct: 77  NPFSAKYVPFNAAPGST--ESYSLDEIVYRSRSGGLLDVEHDMEALKRFDGAYWRDLFDS 134

Query: 405 RVGRTVWPYGS 437
           RVG++ WPYGS
Sbjct: 135 RVGKSTWPYGS 145



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>THRC_SOLTU (Q9MT28) Threonine synthase, chloroplast precursor (EC 4.2.3.1)|
           (TS)
          Length = 519

 Score =  102 bits (255), Expect = 3e-22
 Identities = 49/72 (68%), Positives = 57/72 (79%)
 Frame = +3

Query: 222 ANDFSAWYEPFPPGPGSAADERYSLDEIVYRSSSGGLLDVRHDIAALARYPGSYWRDLFD 401
           +++FSA Y PF  GP S  DE YSLDEIVYRS SGGLLDV+HD+ AL ++ G YWR LFD
Sbjct: 69  SHNFSARYVPFNAGPNS--DEWYSLDEIVYRSRSGGLLDVQHDMDALKKFDGQYWRSLFD 126

Query: 402 SRVGRTVWPYGS 437
           SRVG+T WPYGS
Sbjct: 127 SRVGKTTWPYGS 138



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>SI1L2_RAT (Q5JCS6) Signal-induced proliferation-associated 1-like protein 2|
            (Serine-rich synapse-associated protein)
          Length = 1722

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 19/50 (38%), Positives = 31/50 (62%)
 Frame = -3

Query: 367  RARAAMSWRTSSRPPELERYTISSRE*RSSAADPGPGGKGSYQAEKSLAG 218
            +A+AA+  R++S   +L   T SS   +SS++DPGPGG G ++ +    G
Sbjct: 1099 QAQAAIP-RSTSFDRKLPDGTRSSPSNQSSSSDPGPGGSGPWRPQVGYDG 1147



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>SI1L2_MOUSE (Q80TE4) Signal-induced proliferation-associated 1-like protein 2|
          Length = 1722

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 19/50 (38%), Positives = 31/50 (62%)
 Frame = -3

Query: 367  RARAAMSWRTSSRPPELERYTISSRE*RSSAADPGPGGKGSYQAEKSLAG 218
            +A+AA+  R++S   +L   T SS   +SS++DPGPGG G ++ +    G
Sbjct: 1099 QAQAAIP-RSTSFDRKLPDGTRSSPSNQSSSSDPGPGGSGPWRPQVGYDG 1147



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>SI1L2_HUMAN (Q9P2F8) Signal-induced proliferation-associated 1-like protein 2|
          Length = 1722

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 19/50 (38%), Positives = 31/50 (62%)
 Frame = -3

Query: 367  RARAAMSWRTSSRPPELERYTISSRE*RSSAADPGPGGKGSYQAEKSLAG 218
            +A+AA+  R++S   +L   T SS   +SS++DPGPGG G ++ +    G
Sbjct: 1098 QAQAAIP-RSTSFDRKLPDGTRSSPSNQSSSSDPGPGGSGPWRPQVGYDG 1146



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>MFRP_HUMAN (Q9BY79) Membrane frizzled-related protein (Membrane-type|
           frizzled-related protein)
          Length = 579

 Score = 30.4 bits (67), Expect = 2.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 231 FSAWYEPFPPGPGSAADERYSLDEIV 308
           F AWY+   PG GS A + +  D+++
Sbjct: 246 FHAWYQAMAPGRGSCAHDEFRCDQLI 271



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>HIS8_BACSU (P17731) Histidinol-phosphate aminotransferase (EC 2.6.1.9)|
           (Imidazole acetol-phosphate transaminase)
          Length = 360

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 9/55 (16%)
 Frame = +3

Query: 246 EPFPPG-PGSAADERYSLDEIV--------YRSSSGGLLDVRHDIAALARYPGSY 383
           +P+ PG P  A    Y LD++V        Y  S      + H+I  LA YP  Y
Sbjct: 11  KPYQPGKPIEAVKSEYGLDKVVKLASNENPYGCSEAAKEALHHEIQQLALYPDGY 65



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>HIS8_BACNA (Q8KZ92) Histidinol-phosphate aminotransferase (EC 2.6.1.9)|
           (Imidazole acetol-phosphate transaminase)
          Length = 360

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 9/55 (16%)
 Frame = +3

Query: 246 EPFPPG-PGSAADERYSLDEIV--------YRSSSGGLLDVRHDIAALARYPGSY 383
           +P+ PG P  A    Y LD++V        Y  S      + H+I  LA YP  Y
Sbjct: 11  KPYQPGKPIEAVKSEYGLDKVVKLASNENPYGCSEAAKEALHHEIQQLALYPDGY 65



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>DNAE2_NOCFA (Q5Z1D1) Error-prone DNA polymerase (EC 2.7.7.7)|
          Length = 1146

 Score = 28.5 bits (62), Expect = 7.6
 Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 7/63 (11%)
 Frame = +3

Query: 246 EPFPPGP-------GSAADERYSLDEIVYRSSSGGLLDVRHDIAALARYPGSYWRDLFDS 404
           EP PPGP       G     R S +      ++G    +R+DI AL    G +W  L   
Sbjct: 172 EPDPPGPHLLVLARGQEGYRRLSREIAAAHLAAGEKGVLRYDIDALTAAAGGHWHILTGC 231

Query: 405 RVG 413
           R G
Sbjct: 232 RKG 234


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,213,833
Number of Sequences: 219361
Number of extensions: 401499
Number of successful extensions: 1359
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1357
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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