| Clone Name | bast04e08 |
|---|---|
| Clone Library Name | barley_pub |
>THRC_ARATH (Q9S7B5) Threonine synthase, chloroplast precursor (EC 4.2.3.1)| (TS) Length = 526 Score = 104 bits (259), Expect = 1e-22 Identities = 50/71 (70%), Positives = 55/71 (77%) Frame = +3 Query: 225 NDFSAWYEPFPPGPGSAADERYSLDEIVYRSSSGGLLDVRHDIAALARYPGSYWRDLFDS 404 N FSA Y PF PGS E YSLDEIVYRS SGGLLDV HD+ AL R+ G+YWRDLFDS Sbjct: 77 NPFSAKYVPFNAAPGST--ESYSLDEIVYRSRSGGLLDVEHDMEALKRFDGAYWRDLFDS 134 Query: 405 RVGRTVWPYGS 437 RVG++ WPYGS Sbjct: 135 RVGKSTWPYGS 145
>THRC_SOLTU (Q9MT28) Threonine synthase, chloroplast precursor (EC 4.2.3.1)| (TS) Length = 519 Score = 102 bits (255), Expect = 3e-22 Identities = 49/72 (68%), Positives = 57/72 (79%) Frame = +3 Query: 222 ANDFSAWYEPFPPGPGSAADERYSLDEIVYRSSSGGLLDVRHDIAALARYPGSYWRDLFD 401 +++FSA Y PF GP S DE YSLDEIVYRS SGGLLDV+HD+ AL ++ G YWR LFD Sbjct: 69 SHNFSARYVPFNAGPNS--DEWYSLDEIVYRSRSGGLLDVQHDMDALKKFDGQYWRSLFD 126 Query: 402 SRVGRTVWPYGS 437 SRVG+T WPYGS Sbjct: 127 SRVGKTTWPYGS 138
>SI1L2_RAT (Q5JCS6) Signal-induced proliferation-associated 1-like protein 2| (Serine-rich synapse-associated protein) Length = 1722 Score = 31.2 bits (69), Expect = 1.2 Identities = 19/50 (38%), Positives = 31/50 (62%) Frame = -3 Query: 367 RARAAMSWRTSSRPPELERYTISSRE*RSSAADPGPGGKGSYQAEKSLAG 218 +A+AA+ R++S +L T SS +SS++DPGPGG G ++ + G Sbjct: 1099 QAQAAIP-RSTSFDRKLPDGTRSSPSNQSSSSDPGPGGSGPWRPQVGYDG 1147
>SI1L2_MOUSE (Q80TE4) Signal-induced proliferation-associated 1-like protein 2| Length = 1722 Score = 31.2 bits (69), Expect = 1.2 Identities = 19/50 (38%), Positives = 31/50 (62%) Frame = -3 Query: 367 RARAAMSWRTSSRPPELERYTISSRE*RSSAADPGPGGKGSYQAEKSLAG 218 +A+AA+ R++S +L T SS +SS++DPGPGG G ++ + G Sbjct: 1099 QAQAAIP-RSTSFDRKLPDGTRSSPSNQSSSSDPGPGGSGPWRPQVGYDG 1147
>SI1L2_HUMAN (Q9P2F8) Signal-induced proliferation-associated 1-like protein 2| Length = 1722 Score = 31.2 bits (69), Expect = 1.2 Identities = 19/50 (38%), Positives = 31/50 (62%) Frame = -3 Query: 367 RARAAMSWRTSSRPPELERYTISSRE*RSSAADPGPGGKGSYQAEKSLAG 218 +A+AA+ R++S +L T SS +SS++DPGPGG G ++ + G Sbjct: 1098 QAQAAIP-RSTSFDRKLPDGTRSSPSNQSSSSDPGPGGSGPWRPQVGYDG 1146
>MFRP_HUMAN (Q9BY79) Membrane frizzled-related protein (Membrane-type| frizzled-related protein) Length = 579 Score = 30.4 bits (67), Expect = 2.0 Identities = 10/26 (38%), Positives = 16/26 (61%) Frame = +3 Query: 231 FSAWYEPFPPGPGSAADERYSLDEIV 308 F AWY+ PG GS A + + D+++ Sbjct: 246 FHAWYQAMAPGRGSCAHDEFRCDQLI 271
>HIS8_BACSU (P17731) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 360 Score = 28.9 bits (63), Expect = 5.8 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 9/55 (16%) Frame = +3 Query: 246 EPFPPG-PGSAADERYSLDEIV--------YRSSSGGLLDVRHDIAALARYPGSY 383 +P+ PG P A Y LD++V Y S + H+I LA YP Y Sbjct: 11 KPYQPGKPIEAVKSEYGLDKVVKLASNENPYGCSEAAKEALHHEIQQLALYPDGY 65
>HIS8_BACNA (Q8KZ92) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 360 Score = 28.9 bits (63), Expect = 5.8 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 9/55 (16%) Frame = +3 Query: 246 EPFPPG-PGSAADERYSLDEIV--------YRSSSGGLLDVRHDIAALARYPGSY 383 +P+ PG P A Y LD++V Y S + H+I LA YP Y Sbjct: 11 KPYQPGKPIEAVKSEYGLDKVVKLASNENPYGCSEAAKEALHHEIQQLALYPDGY 65
>DNAE2_NOCFA (Q5Z1D1) Error-prone DNA polymerase (EC 2.7.7.7)| Length = 1146 Score = 28.5 bits (62), Expect = 7.6 Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 7/63 (11%) Frame = +3 Query: 246 EPFPPGP-------GSAADERYSLDEIVYRSSSGGLLDVRHDIAALARYPGSYWRDLFDS 404 EP PPGP G R S + ++G +R+DI AL G +W L Sbjct: 172 EPDPPGPHLLVLARGQEGYRRLSREIAAAHLAAGEKGVLRYDIDALTAAAGGHWHILTGC 231 Query: 405 RVG 413 R G Sbjct: 232 RKG 234 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,213,833 Number of Sequences: 219361 Number of extensions: 401499 Number of successful extensions: 1359 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1340 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1357 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)