>NO20_MEDTR (P93329) Early nodulin 20 precursor (N-20)|
          Length = 268

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 21/45 (46%), Positives = 25/45 (55%)
 Frame = -1

Query: 303 KALQPSWNMVTALSPSDSPPELDASPSSSDEWASWTSPSPSGAAS 169
           K+  PS +   A SPSDS   L  S S SDE  S  +PSPS + S
Sbjct: 203 KSPSPSESPSLAPSPSDSVASLAPSSSPSDESPS-PAPSPSSSGS 246

>RASF2_HUMAN (P50749) Ras association domain-containing protein 2|
          Length = 326

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 19/52 (36%), Positives = 26/52 (50%)
 Frame = -1

Query: 369 DRIGPNGLSPSFFSMILVKATWKALQPSWNMVTALSPSDSPPELDASPSSSD 214
           +RI P   S S+ S   + A    L+P       +S  D+PPE D  PSS+D
Sbjct: 75  ERIRPPPSSSSWHSGCNLGAQGTTLKPLTVPKVQISEVDAPPEGDQMPSSTD 126

>NKX61_RAT (O35762) Homeobox protein Nkx-6.1|
          Length = 365

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 19/53 (35%), Positives = 24/53 (45%)
 Frame = -1

Query: 342 PSFFSMILVKATWKALQPSWNMVTALSPSDSPPELDASPSSSDEWASWTSPSP 184
           P   + +L      AL     M T L P+  PP     PSSS   +S +SPSP
Sbjct: 10  PRQSAFLLSSPPLAALHSMAEMKTPLYPAAYPPLPTGPPSSSSSSSSSSSPSP 62

>NKX61_MOUSE (Q99MA9) Homeobox protein Nkx-6.1|
          Length = 365

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 19/53 (35%), Positives = 24/53 (45%)
 Frame = -1

Query: 342 PSFFSMILVKATWKALQPSWNMVTALSPSDSPPELDASPSSSDEWASWTSPSP 184
           P   + +L      AL     M T L P+  PP     PSSS   +S +SPSP
Sbjct: 10  PRQSAFLLSSPPLAALHSMAEMKTPLYPAAYPPLPTGPPSSSSSSSSSSSPSP 62

>DAB2_RAT (O88797) Disabled homolog 2 (DOC-2) (Mitogen-responsive|
           phosphoprotein) (C9)
          Length = 768

 Score = 28.9 bits (63), Expect = 5.4
 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = -1

Query: 342 PSFFSMILVKATWKALQPSWNMVTALSPSDSPPELDA-SPSSSDEWASWTSPSPSG 178
           PS F   LV  T  A+Q  WN  ++ + + SPP      P++S    +W+S SP G
Sbjct: 534 PSGFGQPLVFGTTPAVQV-WNQPSSFATAASPPPPAVWCPTTSVAPNTWSSTSPLG 588

>NKX61_HUMAN (P78426) Homeobox protein Nkx-6.1|
          Length = 367

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 17/39 (43%), Positives = 20/39 (51%)
 Frame = -1

Query: 300 ALQPSWNMVTALSPSDSPPELDASPSSSDEWASWTSPSP 184
           AL     M T L P+  PP     PSSS   +S +SPSP
Sbjct: 24  ALHSMAEMKTPLYPAAYPPLPAGPPSSSSSSSSSSSPSP 62

>UL84_HCMVT (P29839) 65 kDa early nonstructural protein (UL84 protein)|
          Length = 587

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 19/44 (43%), Positives = 24/44 (54%)
 Frame = -1

Query: 360 GPNGLSPSFFSMILVKATWKALQPSWNMVTALSPSDSPPELDAS 229
           GP GL+ S  S  L + T K L PS      L P++SPP+L  S
Sbjct: 321 GPRGLT-SRISARLSETTAKTLGPSVFGRLELDPNESPPDLTLS 363

>UL84_HCMVA (P16727) 65 kDa early nonstructural protein (UL84 protein)|
          Length = 586

 Score = 28.5 bits (62), Expect = 7.1
 Identities = 19/44 (43%), Positives = 24/44 (54%)
 Frame = -1

Query: 360 GPNGLSPSFFSMILVKATWKALQPSWNMVTALSPSDSPPELDAS 229
           GP GL+ S  S  L + T K L PS      L P++SPP+L  S
Sbjct: 320 GPRGLT-SRISARLSETTAKTLGPSVFGRLELDPNESPPDLTLS 362

>CI005_HUMAN (Q9H330) Protein C9orf5 (Protein CG-2)|
          Length = 911

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 17/38 (44%), Positives = 20/38 (52%)
 Frame = -1

Query: 294 QPSWNMVTALSPSDSPPELDASPSSSDEWASWTSPSPS 181
           QPS     A+   +S P L  SPS S    S TSPSP+
Sbjct: 299 QPSTQPAEAVDRGESAPTLSTSPSPSS--PSPTSPSPT 334

>CDX1_MOUSE (P18111) Homeobox protein CDX-1 (Caudal-type homeobox protein 1)|
          Length = 268

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = -1

Query: 291 PSWNMVTALSPSDSPPELDASP--SSSDEWASWTSPSPSGAAS 169
           P +   T + P+ +PP   A+P  +  D+WA+   P P+ +A+
Sbjct: 43  PDFAGYTHVEPAPAPPPTWAAPFPAPKDDWAAAYGPGPTASAA 85

>TIRAP_MOUSE (Q99JY1) Toll-interleukin 1 receptor domain-containing adapter|
           protein (TIR domain-containing adapter protein) (MyD88
           adapter-like protein) (Adaptor protein Wyatt)
          Length = 241

 Score = 28.1 bits (61), Expect = 9.2
 Identities = 15/50 (30%), Positives = 27/50 (54%)
 Frame = -1

Query: 354 NGLSPSFFSMILVKATWKALQPSWNMVTALSPSDSPPELDASPSSSDEWA 205
           +GLSPS  S     ++ ++     +  + +SP+  P  +D+S SSS  W+
Sbjct: 54  DGLSPSSCSSPPSHSSPESRSSPSSCSSGMSPTSPPTHVDSSSSSSGRWS 103


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,459,124
Number of Sequences: 219361
Number of extensions: 405899
Number of successful extensions: 2279
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2243
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2395157885
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)