ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast04c09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1E134_ARATH (Q94CD8) Putative glucan endo-1,3-beta-glucosidase 4 ... 35 0.069
2E133_ARATH (Q9ZU91) Putative glucan endo-1,3-beta-glucosidase 3 ... 34 0.15

>E134_ARATH (Q94CD8) Putative glucan endo-1,3-beta-glucosidase 4 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Beta-1,3-glucanase)
          Length = 505

 Score = 35.4 bits (80), Expect = 0.069
 Identities = 15/29 (51%), Positives = 23/29 (79%)
 Frame = +2

Query: 371 DGAYIGVNIGTAMSSVPAATQITTLLRSQ 457
           + A+IGVNIGT ++++P  + I TLL+SQ
Sbjct: 22  NAAFIGVNIGTDLTNMPPPSDIVTLLKSQ 50



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>E133_ARATH (Q9ZU91) Putative glucan endo-1,3-beta-glucosidase 3 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Beta-1,3-glucanase)
          Length = 501

 Score = 34.3 bits (77), Expect = 0.15
 Identities = 14/25 (56%), Positives = 21/25 (84%)
 Frame = +2

Query: 383 IGVNIGTAMSSVPAATQITTLLRSQ 457
           IGVNIGT ++++P+ TQ+  LL+SQ
Sbjct: 23  IGVNIGTEVTNMPSPTQVVALLKSQ 47


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,062,438
Number of Sequences: 219361
Number of extensions: 589159
Number of successful extensions: 1337
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1337
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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