>LTBP2_HUMAN (Q14767) Latent transforming growth factor beta-binding protein 2|
           precursor (LTBP-2)
          Length = 1821

 Score = 32.7 bits (73), Expect = 0.42
 Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 20/122 (16%)
 Frame = +1

Query: 121 STKVELIEIDLAEEDPSSVEVVGIRRM----EEAIHGVMVRRATPEWLPFVPGGSFW--- 279
           S    L+++ +     +SV++  + ++    EEA+    V    P WLP  PG S W   
Sbjct: 468 SVNPSLVKVHIHHPPEASVQIHQVAQVRGGVEEALVENSVETRPPPWLPASPGHSLWDSN 527

Query: 280 ------------VPPVR-RPRGVAELVGRIAASGVGEVAYEAEPYVPMTEEEVLSLSTAR 420
                       +PP   RPRG   L+GR   + V      A P + +T +E    S   
Sbjct: 528 NIPARSGEPPRPLPPAAPRPRG---LLGRCYLNTVNGQC--ANPLLELTTQEDCCGSVGA 582

Query: 421 GW 426
            W
Sbjct: 583 FW 584

>GOGA3_HUMAN (Q08378) Golgin subfamily A member 3 (Golgin-160) (Golgi|
            complex-associated protein of 170 kDa) (GCP170)
          Length = 1498

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
 Frame = +1

Query: 55   LAQSLARPSPATAASLLPLRGLSTKVELIEIDLAEEDPSSVEVVGIRRMEEAIHGVMVRR 234
            L + L RP PA +    PL+ L++ ++ ++     ++  S++    R+MEE  H + V  
Sbjct: 1409 LLEELLRPPPAVSKE--PLKNLNSCLQQLK-----QEMDSLQ----RQMEE--HALTVHE 1455

Query: 235  ATPEWLPFVPGGSFWVPPVRR--PRGVAELVGRIAASGVG 348
            +   W P  P  +  VPP     PRG  +   +  AS  G
Sbjct: 1456 SLSSWTPLEPATASPVPPGGHAGPRGDPQRHSQSRASKEG 1495

>GLGB1_STRCO (Q59833) 1,4-alpha-glucan branching enzyme 1 (EC 2.4.1.18)|
           (Glycogen branching enzyme 1) (BE 1)
           (1,4-alpha-D-glucan:1,4-alpha-D-glucan
           6-glucosyl-transferase 1)
          Length = 774

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
 Frame = -2

Query: 338 DAAIRPTSSATPRGRRTGGTQKDPPGTKGSH---SGVARRTITPW 213
           + A+ P   A  R R   GT  DP    G+H    GVA R   P+
Sbjct: 58  EVAVSPAPDAADRERLLAGTHHDPHAVLGAHRVPGGVAFRVFRPY 102

>IF2_AGRT5 (Q8UJ51) Translation initiation factor IF-2|
          Length = 913

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = -2

Query: 314 SATPRGRRTGGTQKDPPGT--KGSHSGVARRTITPWMASSMRRI 189
           +A PRGRRTGG  +D  G   +GS      + + P  A    R+
Sbjct: 235 AAAPRGRRTGGDDEDDRGAVRRGSSLPARGKVVAPAPAKPAARL 278

>NUD16_MOUSE (Q6P3D0) Nucleoside diphosphate-linked moiety X motif 16 (EC|
           3.6.1.-) (Nudix motif 16)
          Length = 195

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 14/28 (50%), Positives = 15/28 (53%)
 Frame = -1

Query: 252 EPLGRGPPHHHAVDGLLHAPDPHDLHRR 169
           E L  GP   HA   LL+APDP  L  R
Sbjct: 11  EALALGPDWRHACHALLYAPDPRKLFGR 38

>GID_RHOCA (O68141) tRNA uridine 5-carboxymethylaminomethyl modification|
           enzyme gid
          Length = 445

 Score = 29.3 bits (64), Expect = 4.6
 Identities = 16/43 (37%), Positives = 19/43 (44%)
 Frame = +1

Query: 298 PRGVAELVGRIAASGVGEVAYEAEPYVPMTEEEVLSLSTARGW 426
           P G A  V R A SG    A  A P + + EEE+  L     W
Sbjct: 89  PAGGALAVDREAFSGAVTAALRAHPLISVAEEEITELPAEGHW 131

>KSR2_HUMAN (Q6VAB6) Kinase suppressor of ras-2 (hKSR2)|
          Length = 829

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 13/16 (81%), Positives = 13/16 (81%), Gaps = 1/16 (6%)
 Frame = +3

Query: 66  PSPPL-SGHRRLPPSP 110
           P PPL SGHR LPPSP
Sbjct: 116 PPPPLESGHRSLPPSP 131

>RL13_CHLSW (O48513) 60S ribosomal protein L13 (BBC1 protein homolog)|
          Length = 208

 Score = 28.9 bits (63), Expect = 6.0
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = +1

Query: 100 LLPLRGLSTKVELIEIDLAEEDPSSVEVVGIRRMEEAIHGVMVRRATPE 246
           LLPL+G    +EL++I    ++ S    + I R+   + G+  +RA  E
Sbjct: 153 LLPLKGTKPALELVKITADMKEGSQYGKLRIERVNARLKGMREKRAADE 201

>LIPA3_RAT (Q91Z79) Liprin-alpha-3 (Protein tyrosine phosphatase receptor type|
           f polypeptide-interacting protein alpha-3)
           (PTPRF-interacting protein alpha-3)
          Length = 1192

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 14/22 (63%), Positives = 14/22 (63%), Gaps = 3/22 (13%)
 Frame = +3

Query: 60  AKPSPPLSGH---RRLPPSPPR 116
           A PSPP SGH   R  PPSP R
Sbjct: 664 ASPSPPSSGHSTPRLAPPSPAR 685

>LIPA3_HUMAN (O75145) Liprin-alpha-3 (Protein tyrosine phosphatase receptor type|
           f polypeptide-interacting protein alpha-3)
           (PTPRF-interacting protein alpha-3)
          Length = 1194

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 14/22 (63%), Positives = 14/22 (63%), Gaps = 3/22 (13%)
 Frame = +3

Query: 60  AKPSPPLSGH---RRLPPSPPR 116
           A PSPP SGH   R  PPSP R
Sbjct: 665 ASPSPPSSGHSTPRLAPPSPAR 686

>LIPA3_MOUSE (P60469) Liprin-alpha-3 (Protein tyrosine phosphatase receptor type|
           f polypeptide-interacting protein alpha-3)
           (PTPRF-interacting protein alpha-3)
          Length = 1043

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 14/22 (63%), Positives = 14/22 (63%), Gaps = 3/22 (13%)
 Frame = +3

Query: 60  AKPSPPLSGH---RRLPPSPPR 116
           A PSPP SGH   R  PPSP R
Sbjct: 514 ASPSPPSSGHSTPRLAPPSPAR 535

>AHT1_YEAST (P29589) Hexose transport activator protein|
          Length = 182

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 14/50 (28%), Positives = 21/50 (42%)
 Frame = +1

Query: 220 VMVRRATPEWLPFVPGGSFWVPPVRRPRGVAELVGRIAASGVGEVAYEAE 369
           V +R   P    F  GG  W P  ++P GV +  G    +  G + +  E
Sbjct: 29  VFIRSVFPLSPSFPAGGGIWGPMEKKPGGVGKKKGSEKKTAQGNIFFSTE 78

>HEM6_RICPR (Q9ZC86) Coproporphyrinogen 3 oxidase, aerobic (EC 1.3.3.3)|
           (Coproporphyrinogen III oxidase, aerobic)
           (Coproporphyrinogenase) (Coprogen oxidase)
          Length = 279

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +1

Query: 310 AELVGRIAASGVGEVAYEAEPYVPMTEEEVLSLSTARGW 426
           AEL G+  A+G+  VA+   P +P        + T++ W
Sbjct: 90  AELDGKFFATGISVVAHLKSPLIPAMHFNTRYIETSKNW 128

>HEM6_RICCN (Q92FV8) Coproporphyrinogen 3 oxidase, aerobic (EC 1.3.3.3)|
           (Coproporphyrinogen III oxidase, aerobic)
           (Coproporphyrinogenase) (Coprogen oxidase)
          Length = 279

 Score = 28.5 bits (62), Expect = 7.9
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +1

Query: 283 PPVRRPRGVAELVGRIAASGVGEVAYEAEPYVPMTEEEVLSLSTARGW 426
           P  R     AEL G+  A+G+  VA+   P +P        + T++ W
Sbjct: 81  PEFRNEIPGAELDGKFFATGISLVAHLKSPLIPAMHFNTRYIETSKSW 128


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.317    0.134    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,359,017
Number of Sequences: 219361
Number of extensions: 754056
Number of successful extensions: 3908
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3896
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2677159704
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)