ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast03g11 |
|---|---|
| Clone Library Name | barley_pub |
>MARE1_COTJA (Q66T82) Microtubule-associated protein RP/EB family member 1| Length = 263 Score = 35.8 bits (81), Expect = 0.035 Identities = 14/27 (51%), Positives = 22/27 (81%) Frame = +3 Query: 30 VGRNEILAWINTTLQLSLAKVEEAASG 110 + R+++LAWIN +LQL+L K+E+ SG Sbjct: 15 LSRHDMLAWINESLQLTLTKIEQLCSG 41
>MARE1_COTCO (Q6V291) Microtubule-associated protein RP/EB family member 1| Length = 263 Score = 35.8 bits (81), Expect = 0.035 Identities = 14/27 (51%), Positives = 22/27 (81%) Frame = +3 Query: 30 VGRNEILAWINTTLQLSLAKVEEAASG 110 + R+++LAWIN +LQL+L K+E+ SG Sbjct: 15 LSRHDMLAWINESLQLTLTKIEQLCSG 41
>MARE1_XENTR (Q6P848) Microtubule-associated protein RP/EB family member 1| Length = 269 Score = 35.8 bits (81), Expect = 0.035 Identities = 14/27 (51%), Positives = 22/27 (81%) Frame = +3 Query: 30 VGRNEILAWINTTLQLSLAKVEEAASG 110 + R+++LAWIN +LQL+L K+E+ SG Sbjct: 15 LSRHDMLAWINESLQLNLTKIEQLCSG 41
>MARE1_RAT (Q66HR2) Microtubule-associated protein RP/EB family member 1| (APC-binding protein EB1) (End-binding protein 1) (EB1) Length = 267 Score = 35.8 bits (81), Expect = 0.035 Identities = 14/27 (51%), Positives = 22/27 (81%) Frame = +3 Query: 30 VGRNEILAWINTTLQLSLAKVEEAASG 110 + R+++LAWIN +LQL+L K+E+ SG Sbjct: 14 LSRHDMLAWINESLQLNLTKIEQLCSG 40
>MARE1_PONPY (Q5R7Z5) Microtubule-associated protein RP/EB family member 1| (APC-binding protein EB1) (End-binding protein 1) (EB1) Length = 267 Score = 35.8 bits (81), Expect = 0.035 Identities = 14/27 (51%), Positives = 22/27 (81%) Frame = +3 Query: 30 VGRNEILAWINTTLQLSLAKVEEAASG 110 + R+++LAWIN +LQL+L K+E+ SG Sbjct: 14 LSRHDMLAWINESLQLNLTKIEQLCSG 40
>MARE1_MOUSE (Q61166) Microtubule-associated protein RP/EB family member 1| (APC-binding protein EB1) (End-binding protein 1) (EB1) Length = 267 Score = 35.8 bits (81), Expect = 0.035 Identities = 14/27 (51%), Positives = 22/27 (81%) Frame = +3 Query: 30 VGRNEILAWINTTLQLSLAKVEEAASG 110 + R+++LAWIN +LQL+L K+E+ SG Sbjct: 14 LSRHDMLAWINESLQLNLTKIEQLCSG 40
>MARE1_HUMAN (Q15691) Microtubule-associated protein RP/EB family member 1| (APC-binding protein EB1) (End-binding protein 1) (EB1) Length = 267 Score = 35.8 bits (81), Expect = 0.035 Identities = 14/27 (51%), Positives = 22/27 (81%) Frame = +3 Query: 30 VGRNEILAWINTTLQLSLAKVEEAASG 110 + R+++LAWIN +LQL+L K+E+ SG Sbjct: 14 LSRHDMLAWINESLQLNLTKIEQLCSG 40
>MARE1_BOVIN (Q3ZBD9) Microtubule-associated protein RP/EB family member 1| (APC-binding protein EB1) (End-binding protein 1) (EB1) Length = 267 Score = 35.8 bits (81), Expect = 0.035 Identities = 14/27 (51%), Positives = 22/27 (81%) Frame = +3 Query: 30 VGRNEILAWINTTLQLSLAKVEEAASG 110 + R+++LAWIN +LQL+L K+E+ SG Sbjct: 14 LSRHDMLAWINESLQLNLTKIEQLCSG 40
>MARE1_CHICK (Q5ZLC7) Microtubule-associated protein RP/EB family member 1| Length = 258 Score = 35.8 bits (81), Expect = 0.035 Identities = 14/27 (51%), Positives = 22/27 (81%) Frame = +3 Query: 30 VGRNEILAWINTTLQLSLAKVEEAASG 110 + R+++LAWIN +LQL+L K+E+ SG Sbjct: 15 LSRHDMLAWINESLQLTLTKIEQLCSG 41
>MARE3_RAT (Q5XIT1) Microtubule-associated protein RP/EB family member 3| (End-binding protein 3) (EB3) (EB1 protein family member 3) (EBF3) (RP3) Length = 281 Score = 31.6 bits (70), Expect = 0.65 Identities = 11/27 (40%), Positives = 20/27 (74%) Frame = +3 Query: 30 VGRNEILAWINTTLQLSLAKVEEAASG 110 + R+++LAW+N +L L+ K+E+ SG Sbjct: 15 LSRHDMLAWVNDSLHLNYTKIEQLCSG 41
>MARE3_MOUSE (Q6PER3) Microtubule-associated protein RP/EB family member 3| (End-binding protein 3) (EB3) (EB1 protein family member 3) (EBF3) (RP3) Length = 281 Score = 31.6 bits (70), Expect = 0.65 Identities = 11/27 (40%), Positives = 20/27 (74%) Frame = +3 Query: 30 VGRNEILAWINTTLQLSLAKVEEAASG 110 + R+++LAW+N +L L+ K+E+ SG Sbjct: 15 LSRHDMLAWVNDSLHLNYTKIEQLCSG 41
>MARE3_HUMAN (Q9UPY8) Microtubule-associated protein RP/EB family member 3| (End-binding protein 3) (EB3) (EB1 protein family member 3) (EBF3) (RP3) Length = 281 Score = 31.6 bits (70), Expect = 0.65 Identities = 11/27 (40%), Positives = 20/27 (74%) Frame = +3 Query: 30 VGRNEILAWINTTLQLSLAKVEEAASG 110 + R+++LAW+N +L L+ K+E+ SG Sbjct: 15 LSRHDMLAWVNDSLHLNYTKIEQLCSG 41
>MARE2_CHICK (Q5ZKK1) Microtubule-associated protein RP/EB family member 2| Length = 338 Score = 31.2 bits (69), Expect = 0.85 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = +3 Query: 30 VGRNEILAWINTTLQLSLAKVEEAASG 110 + R++I+AW+N L L+ KVE+ SG Sbjct: 58 MSRHDIIAWVNDILALNYTKVEQLCSG 84
>MARE2_MOUSE (Q8R001) Microtubule-associated protein RP/EB family member 2| (APC-binding protein EB2) (End-binding protein 2) (EB2) Length = 326 Score = 30.4 bits (67), Expect = 1.5 Identities = 11/27 (40%), Positives = 19/27 (70%) Frame = +3 Query: 30 VGRNEILAWINTTLQLSLAKVEEAASG 110 + R++I+AW+N + L+ KVE+ SG Sbjct: 57 MSRHDIIAWVNDIVSLNYTKVEQLCSG 83
>MARE2_HUMAN (Q15555) Microtubule-associated protein RP/EB family member 2| (APC-binding protein EB2) (End-binding protein 2) (EB2) Length = 327 Score = 30.4 bits (67), Expect = 1.5 Identities = 11/27 (40%), Positives = 19/27 (70%) Frame = +3 Query: 30 VGRNEILAWINTTLQLSLAKVEEAASG 110 + R++I+AW+N + L+ KVE+ SG Sbjct: 58 MSRHDIIAWVNDIVSLNYTKVEQLCSG 84
>MARE2_XENLA (Q7ZXP1) Microtubule-associated protein RP/EB family member 2| Length = 327 Score = 29.3 bits (64), Expect = 3.2 Identities = 11/27 (40%), Positives = 20/27 (74%) Frame = +3 Query: 30 VGRNEILAWINTTLQLSLAKVEEAASG 110 + R++I+AW+N + L+ KVE+ +SG Sbjct: 57 MSRHDIIAWVNDIVCLNYIKVEQLSSG 83
>BIM1_YEAST (P40013) Protein BIM1| Length = 344 Score = 29.3 bits (64), Expect = 3.2 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = +3 Query: 36 RNEILAWINTTLQLSLAKVEEAASG 110 R E+L W+N L L+ K+EE +G Sbjct: 9 RTELLTWLNGLLNLNYKKIEECGTG 33 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 12,254,328 Number of Sequences: 219361 Number of extensions: 115362 Number of successful extensions: 489 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 486 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 489 length of database: 80,573,946 effective HSP length: 12 effective length of database: 77,941,614 effective search space used: 1870598736 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
