>ref|XM_483643.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2102

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 63/71 (88%)
 Strand = Plus / Plus

                                                                       
Query: 241 cgccttcgtcgtcacgtcgctcctgcactggtcgtctcaaggtggtgcggcgtgggggag 300
           |||||||| ||||||||||||||||||||||  ||| |  |||||  |||||||||||||
Sbjct: 228 cgccttcgccgtcacgtcgctcctgcactggctgtcgcccggtggcccggcgtgggggag 287

                      
Query: 301 gtattggtgga 311
           |||||||||||
Sbjct: 288 gtattggtgga 298



 Score = 46.1 bits (23), Expect = 0.093
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                       
Query: 365 cccgtgatcggcagcatggggctcatgaccggcctcgcgcaccgtaagctggcggtggcg 424
           |||||| |||||||||||  ||||||| | || ||||||||||| ||||| || | ||||
Sbjct: 352 cccgtgctcggcagcatgtcgctcatggcgggactcgcgcaccggaagctcgccgcggcg 411

              
Query: 425 gcg 427
           |||
Sbjct: 412 gcg 414



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 144 gcggctggctgctgtacgtttctcttgcagccaaatgc 181
           ||||||||||||||||||| || || || |||||||||
Sbjct: 143 gcggctggctgctgtacgtctccctcgctgccaaatgc 180

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                            
Query: 241      cgccttcgtcgtcacgtcgctcctgcactggtcgtctcaaggtggtgcggcgtgggggag 300
                |||||||| ||||||||||||||||||||||  ||| |  |||||  |||||||||||||
Sbjct: 27415368 cgccttcgccgtcacgtcgctcctgcactggctgtcgcccggtggcccggcgtgggggag 27415309

                           
Query: 301      gtattggtgga 311
                |||||||||||
Sbjct: 27415308 gtattggtgga 27415298



 Score = 46.1 bits (23), Expect = 0.093
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                            
Query: 365      cccgtgatcggcagcatggggctcatgaccggcctcgcgcaccgtaagctggcggtggcg 424
                |||||| |||||||||||  ||||||| | || ||||||||||| ||||| || | ||||
Sbjct: 27415244 cccgtgctcggcagcatgtcgctcatggcgggactcgcgcaccggaagctcgccgcggcg 27415185

                   
Query: 425      gcg 427
                |||
Sbjct: 27415184 gcg 27415182



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 144      gcggctggctgctgtacgtttctcttgcagccaaatgc 181
                ||||||||||||||||||| || || || |||||||||
Sbjct: 27415453 gcggctggctgctgtacgtctccctcgctgccaaatgc 27415416

>dbj|AP004704.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0544G09
          Length = 137481

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                         
Query: 241   cgccttcgtcgtcacgtcgctcctgcactggtcgtctcaaggtggtgcggcgtgggggag 300
             |||||||| ||||||||||||||||||||||  ||| |  |||||  |||||||||||||
Sbjct: 42163 cgccttcgccgtcacgtcgctcctgcactggctgtcgcccggtggcccggcgtgggggag 42104

                        
Query: 301   gtattggtgga 311
             |||||||||||
Sbjct: 42103 gtattggtgga 42093



 Score = 46.1 bits (23), Expect = 0.093
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                         
Query: 365   cccgtgatcggcagcatggggctcatgaccggcctcgcgcaccgtaagctggcggtggcg 424
             |||||| |||||||||||  ||||||| | || ||||||||||| ||||| || | ||||
Sbjct: 42039 cccgtgctcggcagcatgtcgctcatggcgggactcgcgcaccggaagctcgccgcggcg 41980

                
Query: 425   gcg 427
             |||
Sbjct: 41979 gcg 41977



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 144   gcggctggctgctgtacgtttctcttgcagccaaatgc 181
             ||||||||||||||||||| || || || |||||||||
Sbjct: 42248 gcggctggctgctgtacgtctccctcgctgccaaatgc 42211

>dbj|AK072163.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131L23, full
           insert sequence
          Length = 2102

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 63/71 (88%)
 Strand = Plus / Plus

                                                                       
Query: 241 cgccttcgtcgtcacgtcgctcctgcactggtcgtctcaaggtggtgcggcgtgggggag 300
           |||||||| ||||||||||||||||||||||  ||| |  |||||  |||||||||||||
Sbjct: 228 cgccttcgccgtcacgtcgctcctgcactggctgtcgcccggtggcccggcgtgggggag 287

                      
Query: 301 gtattggtgga 311
           |||||||||||
Sbjct: 288 gtattggtgga 298



 Score = 46.1 bits (23), Expect = 0.093
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                       
Query: 365 cccgtgatcggcagcatggggctcatgaccggcctcgcgcaccgtaagctggcggtggcg 424
           |||||| |||||||||||  ||||||| | || ||||||||||| ||||| || | ||||
Sbjct: 352 cccgtgctcggcagcatgtcgctcatggcgggactcgcgcaccggaagctcgccgcggcg 411

              
Query: 425 gcg 427
           |||
Sbjct: 412 gcg 414



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 144 gcggctggctgctgtacgtttctcttgcagccaaatgc 181
           ||||||||||||||||||| || || || |||||||||
Sbjct: 143 gcggctggctgctgtacgtctccctcgctgccaaatgc 180

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                            
Query: 368      gtgatcggcagcatggggctcatgaccggcctcgcgcaccgtaagctggcggtggcggcg 427
                ||||||||||||||| ||||||||||||| || |||||||| ||||| || | |||||||
Sbjct: 20390231 gtgatcggcagcatgtggctcatgaccgggctggcgcaccggaagctcgccgcggcggcg 20390290

>dbj|AP005682.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1531_B07
          Length = 115245

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                         
Query: 368   gtgatcggcagcatggggctcatgaccggcctcgcgcaccgtaagctggcggtggcggcg 427
             ||||||||||||||| ||||||||||||| || |||||||| ||||| || | |||||||
Sbjct: 18370 gtgatcggcagcatgtggctcatgaccgggctggcgcaccggaagctcgccgcggcggcg 18429

>emb|AL355385.15| Human DNA sequence from clone RP11-387M24 on chromosome 6 Contains the 5'
              end of a gene for a novel protein (KIAA0076 KIAA0708), the
              gene for a novel protein (CGI-22),  a novel gene, the PTK7
              gene for protein tyrosine kinase 7, the 5' end of the SRF
              gene for serum response factor (c-fos serum response
              element-binding transcription factor) and CpG islands,
              complete sequence
          Length = 129884

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 40     cctttcatttgcgccccctagt 61
              ||||||||||||||||||||||
Sbjct: 120619 cctttcatttgcgccccctagt 120598

>emb|BX064006.1|CNS09LJU Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC46AE03 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 964

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 224 gttgcagttctgctcgccgcc 244
           |||||||||||||||||||||
Sbjct: 845 gttgcagttctgctcgccgcc 865

>emb|BX017784.1|CNS08LVW Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA26DF02 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 969

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 224 gttgcagttctgctcgccgcc 244
           |||||||||||||||||||||
Sbjct: 871 gttgcagttctgctcgccgcc 891

>ref|XM_473839.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1374

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 185 gccaacggcgacggcgagcc 204
           ||||||||||||||||||||
Sbjct: 247 gccaacggcgacggcgagcc 266

>ref|NG_001333.1| Homo sapiens T cell receptor beta locus (TRB@) on chromosome 7
          Length = 684973

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 356    cggggcttccccgtgatcgg 375
              ||||||||||||||||||||
Sbjct: 125135 cggggcttccccgtgatcgg 125154

>emb|AL445222.9| Human DNA sequence from clone RP11-356B19 on chromosome 9 Contains the 3'
              end of the gene for a novel protein (DKFZp761J1523), the
              SLC2A8 gene for solute carrier family 2, (facilitated
              glucose transporter) member 8 (glucose transporter
              X1)(GLUT8, GLUTX1), the ZNF79 gene for zinc finger protein
              79 (pT7), the RPL12 gene for ribosomal protein L12 (60S
              ribosomal protein L12), the gene for a novel protein, the
              gene for a novel protein (DKFZP434H0820)(FLJ13518,
              FLJ22151, FLJ22298) and four Cpg islands, complete sequence
          Length = 225370

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 309    ggacgaggaagggtctgggc 328
              ||||||||||||||||||||
Sbjct: 214316 ggacgaggaagggtctgggc 214335

>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 372     tcggcagcatggggctcatg 391
               ||||||||||||||||||||
Sbjct: 1508134 tcggcagcatggggctcatg 1508115

>emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060N03,
              complete sequence
          Length = 179798

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 185    gccaacggcgacggcgagcc 204
              ||||||||||||||||||||
Sbjct: 171345 gccaacggcgacggcgagcc 171364

>emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085I10,
            complete sequence
          Length = 150551

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 185  gccaacggcgacggcgagcc 204
            ||||||||||||||||||||
Sbjct: 1192 gccaacggcgacggcgagcc 1211

>ref|XM_936363.1| PREDICTED: Homo sapiens similar to T-cell receptor beta chain V
           region CTL-L17 precursor (LOC642207), mRNA
          Length = 598

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 356 cggggcttccccgtgatcgg 375
           ||||||||||||||||||||
Sbjct: 329 cggggcttccccgtgatcgg 348

>emb|BX323601.6| Zebrafish DNA sequence from clone RP71-14P11, complete sequence
          Length = 207067

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   agggtctgggcattggcgag 337
             ||||||||||||||||||||
Sbjct: 77594 agggtctgggcattggcgag 77613

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 185      gccaacggcgacggcgagcc 204
                ||||||||||||||||||||
Sbjct: 30903824 gccaacggcgacggcgagcc 30903843

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 183     gcgccaacggcgacggcgag 202
               ||||||||||||||||||||
Sbjct: 1647138 gcgccaacggcgacggcgag 1647119

>emb|AL442105.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0702G05, complete
             sequence
          Length = 134586

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   gccaacggcgacggcgagcc 204
             ||||||||||||||||||||
Sbjct: 80818 gccaacggcgacggcgagcc 80837

>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 238     cgccgccttcgtcgtcacgt 257
               ||||||||||||||||||||
Sbjct: 2586247 cgccgccttcgtcgtcacgt 2586228

>gb|U66059.1| Human germline T-cell receptor beta chain Dopamine-beta-hydroxylase-like,
              TRY1, TRY2, TRY3, TCRBV27S1P, TCRBV22S1A2N1T, TCRBV9S1A1T,
              TCRBV7S1A1N2T, TCRBV5S1A1T, TCRBV13S3, TCRBV6S7P,
              TCRBV7S3A2T, TCRBV13S2A1T, TCRBV9S2A2PT, TCRBV7S2A1N4T,
              TCRBV13S9/13S2A1T, TCRBV6S5A1N1, TCRBV30S1P, TCRBV31S1,
              TCRBV13S5, TCRBV6S1A1N1, TCRBV32S1P, TCRBV5S5P,
              TCRBV1S1A1N1, TCRBV12S2A1T, TCRBV21S1, TCRBV8S4P,
              TCRBV12S3, TCRBV21S3A2N2T, TCRBV8S5P, TCRBV13S1 genes from
              bases 1 to 267156 (section 1 of 3)
          Length = 267156

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 356    cggggcttccccgtgatcgg 375
              ||||||||||||||||||||
Sbjct: 125135 cggggcttccccgtgatcgg 125154

>dbj|AP006393.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT03B16, TM0276,
            complete sequence
          Length = 91654

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 300  ggtattggtggacgaggaagggtc 323
            ||||||||||| ||||||||||||
Sbjct: 5251 ggtattggtgggcgaggaagggtc 5274

>emb|X61444.1|HSTRVB610 H.sapiens TCR V-beta 6.10 gene for TCR beta chain variable region
          Length = 1664

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 356  cggggcttccccgtgatcgg 375
            ||||||||||||||||||||
Sbjct: 1504 cggggcttccccgtgatcgg 1523


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,481,995
Number of Sequences: 3902068
Number of extensions: 2481995
Number of successful extensions: 49854
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 49489
Number of HSP's gapped (non-prelim): 361
length of query: 429
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 407
effective length of database: 17,147,199,772
effective search space: 6978910307204
effective search space used: 6978910307204
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)