ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast03f10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome... 184 1e-43
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 184 1e-43
3gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 184 1e-43
4ref|XM_466267.1| Oryza sativa (japonica cultivar-group), mRNA 60 5e-06
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 60 5e-06
6dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic D... 60 5e-06
7gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 44 0.32
8ref|XM_852171.1| PREDICTED: Canis familiaris similar to Dolichyl... 44 0.32
9ref|XM_843737.1| PREDICTED: Canis familiaris similar to Dolichyl... 44 0.32
10gb|AE005999.1| Caulobacter crescentus CB15 section 325 of 359 of... 44 0.32
11tpg|BK000629.1| TPA: TPA_exp: Mus musculus otopetrin 2 (Otop2) g... 44 0.32
12dbj|AB121230.1| Cryptococcus humicola ChDDO gene for D-aspartate... 44 0.32
13dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 44 0.32
14gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.32
15dbj|AB087501.1| Mus musculus js genes for Jackson shaker and hyp... 44 0.32
16gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 44 0.32
17emb|AL603828.9| Mouse DNA sequence from clone RP23-117K15 on chr... 44 0.32
18ref|XM_366139.1| Magnaporthe grisea 70-15 chromosome IV hypothet... 42 1.3
19gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 1.3
20gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.3
21gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete ge... 42 1.3
22gb|DQ087285.1| Burkholderia pseudomallei phage phi52237, complet... 42 1.3
23emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete ... 42 1.3
24emb|BX640427.1| Bordetella parapertussis strain 12822, complete ... 42 1.3
25emb|BX640414.1| Bordetella pertussis strain Tohama I, complete g... 42 1.3
26emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.3
27emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.3
28emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete ... 42 1.3
29emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete ... 42 1.3
30gb|AY528597.1| Burkholderia pseudomallei clone 167 unknown sequence 42 1.3
31gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbare str... 42 1.3
32gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 42 1.3
33gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 42 1.3
34dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
35dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
36dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
37dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
38dbj|AK121731.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
39dbj|AK119594.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
40dbj|AK111333.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
41dbj|AK064068.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
42gb|AF054585.1|AF054585 Streptomyces coelicolor indoleglycerol ph... 42 1.3
43dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 42 1.3
44dbj|D10358.1|KPNFOLA K. aerogenes folA and apaH genes 42 1.3
45ref|XM_480271.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.9
46ref|XM_467432.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.9
47ref|NM_195889.1| Oryza sativa (japonica cultivar-group) hypothet... 40 4.9
48ref|XM_473255.1| Oryza sativa (japonica cultivar-group), predic... 40 4.9
49gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, co... 40 4.9
50gb|AC090441.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.9
51gb|AC129306.5| Mus musculus BAC clone RP24-178A16 from chromosom... 40 4.9
52ref|XM_612729.2| PREDICTED: Bos taurus similar to VPS10 domain r... 40 4.9
53ref|XM_849537.1| PREDICTED: Canis familiaris similar to Tetraspa... 40 4.9
54gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 4.9
55emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 4.9
56emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 40 4.9
57gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 4.9
58emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 4.9
59emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete ... 40 4.9
60dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 4.9
61gb|AE005745.1| Caulobacter crescentus CB15 section 71 of 359 of ... 40 4.9
62gb|AE011959.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 4.9
63gb|AE012487.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 4.9
64gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 4.9
65dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
66dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
67dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
68dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
69dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
70gb|AF325723.1|AF325723 Pennisetum ciliare phosphate-induced prot... 40 4.9
71dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
72dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
73dbj|AP004161.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
74dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 4.9
75dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 4.9
76dbj|AP005904.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
77gb|AE005156.1| Halobacterium sp. NRC-1 plasmid pNRC200 section 1... 40 4.9
78dbj|AB154372.1| Ipomoea tricolor ItIVS gene for bHLH transcripti... 40 4.9
79dbj|AB154371.1| Ipomoea tricolor ItIVS gene for bHLH transcripti... 40 4.9
80dbj|AB154370.1| Ipomoea tricolor ItIVS mRNA for bHLH transcripti... 40 4.9
81dbj|AB154369.1| Ipomoea purpurea IpIVS mRNA for bHLH transcripti... 40 4.9
82dbj|AP004560.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.9
83dbj|AK070234.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.9
84dbj|AK064945.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.9
85gb|AF127374.1|AF127374 Streptomyces lavendulae LinA homolog, cyt... 40 4.9
86gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 4.9
87gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 4.9
88gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.9
89emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4,... 40 4.9
90emb|CT025520.10| Mouse DNA sequence from clone RP23-393E22 on ch... 40 4.9
91dbj|AB232775.1| Ipomoea nil InbHLH2 mRNA for bHLH transcriptiona... 40 4.9 
>gb|AC135459.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0004P24, complete sequence
          Length = 137721

 Score =  184 bits (93), Expect = 1e-43
 Identities = 153/173 (88%)
 Strand = Plus / Plus

                                                                         
Query: 83    cacgtcgacctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 142
             |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18281 cacgtcgagctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 18340

                                                                         
Query: 143   ccgcacggatcctaccgctcgatgcgccgcgtgtgccgcggctggcggagcgccgccgcc 202
             ||||||||  |  ||||  ||||||| |||||||||||||| ||| ||||||| || || 
Sbjct: 18341 ccgcacggggctcaccgggcgatgcggcgcgtgtgccgcgggtggaggagcgcggcggcg 18400

                                                                  
Query: 203   gccccggagttcgccctggcgcgcgccgaggccggcgccaacgaggatctggt 255
              | || | ||||||| |||||||||||||||| ||||||||||||||| ||||
Sbjct: 18401 acgcccgcgttcgccatggcgcgcgccgaggcgggcgccaacgaggatttggt 18453



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                            
Query: 312   ccccggcgtacggcgtggccgtgtacaacgtcaccaccggggagtgg 358
             ||||||||||||| ||||| ||||||||||| || || |||||||||
Sbjct: 18537 ccccggcgtacggggtggcggtgtacaacgtgacgacgggggagtgg 18583
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  184 bits (93), Expect = 1e-43
 Identities = 153/173 (88%)
 Strand = Plus / Minus

                                                                           
Query: 83      cacgtcgacctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 142
               |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7798674 cacgtcgagctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 7798615

                                                                           
Query: 143     ccgcacggatcctaccgctcgatgcgccgcgtgtgccgcggctggcggagcgccgccgcc 202
               ||||||||  |  ||||  ||||||| |||||||||||||| ||| ||||||| || || 
Sbjct: 7798614 ccgcacggggctcaccgggcgatgcggcgcgtgtgccgcgggtggaggagcgcggcggcg 7798555

                                                                    
Query: 203     gccccggagttcgccctggcgcgcgccgaggccggcgccaacgaggatctggt 255
                | || | ||||||| |||||||||||||||| ||||||||||||||| ||||
Sbjct: 7798554 acgcccgcgttcgccatggcgcgcgccgaggcgggcgccaacgaggatttggt 7798502



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                              
Query: 312     ccccggcgtacggcgtggccgtgtacaacgtcaccaccggggagtgg 358
               ||||||||||||| ||||| ||||||||||| || || |||||||||
Sbjct: 7798418 ccccggcgtacggggtggcggtgtacaacgtgacgacgggggagtgg 7798372
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  184 bits (93), Expect = 1e-43
 Identities = 153/173 (88%)
 Strand = Plus / Minus

                                                                           
Query: 83      cacgtcgacctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 142
               |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7868761 cacgtcgagctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtc 7868702

                                                                           
Query: 143     ccgcacggatcctaccgctcgatgcgccgcgtgtgccgcggctggcggagcgccgccgcc 202
               ||||||||  |  ||||  ||||||| |||||||||||||| ||| ||||||| || || 
Sbjct: 7868701 ccgcacggggctcaccgggcgatgcggcgcgtgtgccgcgggtggaggagcgcggcggcg 7868642

                                                                    
Query: 203     gccccggagttcgccctggcgcgcgccgaggccggcgccaacgaggatctggt 255
                | || | ||||||| |||||||||||||||| ||||||||||||||| ||||
Sbjct: 7868641 acgcccgcgttcgccatggcgcgcgccgaggcgggcgccaacgaggatttggt 7868589



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                              
Query: 312     ccccggcgtacggcgtggccgtgtacaacgtcaccaccggggagtgg 358
               ||||||||||||| ||||| ||||||||||| || || |||||||||
Sbjct: 7868505 ccccggcgtacggggtggcggtgtacaacgtgacgacgggggagtgg 7868459
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>ref|XM_466267.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1200

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 81/98 (82%)
 Strand = Plus / Plus

                                                                       
Query: 92  ctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtcccgcacgga 151
           |||||||||||| |||| |||||||| ||| | || |||||||||||||| |||  | | 
Sbjct: 70  ctcatcccggggttgccggacgacgtggccatggagtgcctggcgcgcgtgccgagccgg 129

                                                 
Query: 152 tcctaccgctcgatgcgccgcgtgtgccgcggctggcg 189
           ||  ||||  || ||||||||||||||||||| |||||
Sbjct: 130 tcgcaccgggcggtgcgccgcgtgtgccgcgggtggcg 167
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 81/98 (82%)
 Strand = Plus / Plus

                                                                            
Query: 92       ctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtcccgcacgga 151
                |||||||||||| |||| |||||||| ||| | || |||||||||||||| |||  | | 
Sbjct: 21385077 ctcatcccggggttgccggacgacgtggccatggagtgcctggcgcgcgtgccgagccgg 21385136

                                                      
Query: 152      tcctaccgctcgatgcgccgcgtgtgccgcggctggcg 189
                ||  ||||  || ||||||||||||||||||| |||||
Sbjct: 21385137 tcgcaccgggcggtgcgccgcgtgtgccgcgggtggcg 21385174



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 219      tggcgcgcgccgaggccggc 238
                ||||||||||||||||||||
Sbjct: 29483459 tggcgcgcgccgaggccggc 29483440
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>dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1712_E04
          Length = 110098

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 81/98 (82%)
 Strand = Plus / Plus

                                                                         
Query: 92    ctcatcccggggatgcccgacgacgtcgccgtcgactgcctggcgcgcgtcccgcacgga 151
             |||||||||||| |||| |||||||| ||| | || |||||||||||||| |||  | | 
Sbjct: 45030 ctcatcccggggttgccggacgacgtggccatggagtgcctggcgcgcgtgccgagccgg 45089

                                                   
Query: 152   tcctaccgctcgatgcgccgcgtgtgccgcggctggcg 189
             ||  ||||  || ||||||||||||||||||| |||||
Sbjct: 45090 tcgcaccgggcggtgcgccgcgtgtgccgcgggtggcg 45127
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 226     cgccgaggccggcgccaacgaggatc 251
               |||||||| |||||||||||||||||
Sbjct: 4281763 cgccgaggacggcgccaacgaggatc 4281788
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>ref|XM_852171.1| PREDICTED: Canis familiaris similar to
           Dolichyl-diphosphooligosaccharide--protein
           glycosyltransferase 67 kDa subunit precursor (Ribophorin
           I) (RPN-I), transcript variant 4 (LOC476516), mRNA
          Length = 1957

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 187 gcggagcgccgccgccgccccg 208
           ||||||||||||||||||||||
Sbjct: 52  gcggagcgccgccgccgccccg 31
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>ref|XM_843737.1| PREDICTED: Canis familiaris similar to
           Dolichyl-diphosphooligosaccharide--protein
           glycosyltransferase 67 kDa subunit precursor (Ribophorin
           I) (RPN-I), transcript variant 3 (LOC476516), mRNA
          Length = 2110

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 187 gcggagcgccgccgccgccccg 208
           ||||||||||||||||||||||
Sbjct: 52  gcggagcgccgccgccgccccg 31
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>gb|AE005999.1| Caulobacter crescentus CB15 section 325 of 359 of the complete genome
          Length = 12079

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 271  cggcaacccggtggccggcgacgacgcggc 300
            |||| |||| ||||||||||||||||||||
Sbjct: 3354 cggcgaccccgtggccggcgacgacgcggc 3325
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>tpg|BK000629.1| TPA: TPA_exp: Mus musculus otopetrin 2 (Otop2) gene, complete cds
          Length = 53301

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 14    cagcaaagctcacacaagtcacaagc 39
             |||| |||||||||||||||||||||
Sbjct: 25446 cagccaagctcacacaagtcacaagc 25471
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>dbj|AB121230.1| Cryptococcus humicola ChDDO gene for D-aspartate oxidase, exon 1-3,
            complete cds
          Length = 1783

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 219  tggcgcgcgccgaggccggcgc 240
            ||||||||||||||||||||||
Sbjct: 1120 tggcgcgcgccgaggccggcgc 1099
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 269     ttcggcaacccggtggccggcg 290
               ||||||||||||||||||||||
Sbjct: 1606464 ttcggcaacccggtggccggcg 1606443



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 195     ccgccgccgccccggagttc 214
               ||||||||||||||||||||
Sbjct: 4061183 ccgccgccgccccggagttc 4061164
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 277     cccggtggccggcgacgacgcg 298
               ||||||||||||||||||||||
Sbjct: 2281355 cccggtggccggcgacgacgcg 2281376



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 214     cgccctggcgcgcgccgagg 233
               ||||||||||||||||||||
Sbjct: 3071963 cgccctggcgcgcgccgagg 3071982



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 270    tcggcaacccggtggccggcgacg 293
              ||||| ||||||||||||||||||
Sbjct: 310706 tcggccacccggtggccggcgacg 310729
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>dbj|AB087501.1| Mus musculus js genes for Jackson shaker and hypothetical protein,
             complete and partial cds
          Length = 72195

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 14    cagcaaagctcacacaagtcacaagc 39
             |||| |||||||||||||||||||||
Sbjct: 54762 cagccaagctcacacaagtcacaagc 54787
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 224     cgcgccgaggccggcgccaacgagga 249
               |||||||||||||||||| |||||||
Sbjct: 2631514 cgcgccgaggccggcgccgacgagga 2631489
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>emb|AL603828.9| Mouse DNA sequence from clone RP23-117K15 on chromosome 11, complete
              sequence
          Length = 210982

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 14     cagcaaagctcacacaagtcacaagc 39
              |||| |||||||||||||||||||||
Sbjct: 132668 cagccaagctcacacaagtcacaagc 132693
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>ref|XM_366139.1| Magnaporthe grisea 70-15 chromosome IV hypothetical protein
            (MG10359.4) partial mRNA
          Length = 1248

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 218  ctggcgcgcgccgaggccggc 238
            |||||||||||||||||||||
Sbjct: 1036 ctggcgcgcgccgaggccggc 1056
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 220     ggcgcgcgccgaggccggcgc 240
               |||||||||||||||||||||
Sbjct: 3181412 ggcgcgcgccgaggccggcgc 3181432
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 156      accgctcgatgcgccgcgtgt 176
                |||||||||||||||||||||
Sbjct: 10557369 accgctcgatgcgccgcgtgt 10557349
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>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome
          Length = 138390

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 217   cctggcgcgcgccgaggccgg 237
             |||||||||||||||||||||
Sbjct: 82002 cctggcgcgcgccgaggccgg 81982
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>gb|DQ087285.1| Burkholderia pseudomallei phage phi52237, complete genome
          Length = 37639

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 217  cctggcgcgcgccgaggccggcgcc 241
            ||||||||||||||||| |||||||
Sbjct: 6106 cctggcgcgcgccgaggtcggcgcc 6130
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>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16
          Length = 348706

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 282   tggccggcgacgacgcggcgc 302
             |||||||||||||||||||||
Sbjct: 55398 tggccggcgacgacgcggcgc 55418
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>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14
          Length = 348997

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 282    tggccggcgacgacgcggcgc 302
              |||||||||||||||||||||
Sbjct: 312081 tggccggcgacgacgcggcgc 312101
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>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12
          Length = 343243

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 282    tggccggcgacgacgcggcgc 302
              |||||||||||||||||||||
Sbjct: 190070 tggccggcgacgacgcggcgc 190050
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 220     ggcgcgcgccgaggccggcgc 240
               |||||||||||||||||||||
Sbjct: 1358844 ggcgcgcgccgaggccggcgc 1358864
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 217    cctggcgcgcgccgaggccggcgcc 241
              ||||||||||||||||| |||||||
Sbjct: 148671 cctggcgcgcgccgaggtcggcgcc 148695
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>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29
          Length = 300100

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 277    cccggtggccggcgacgacgcggcg 301
              |||||||||||||||||||| ||||
Sbjct: 270247 cccggtggccggcgacgacgaggcg 270271
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>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29
          Length = 321250

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 223   gcgcgccgaggccggcgccaa 243
             |||||||||||||||||||||
Sbjct: 89136 gcgcgccgaggccggcgccaa 89116
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>gb|AY528597.1| Burkholderia pseudomallei clone 167 unknown sequence
          Length = 246

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 217 cctggcgcgcgccgaggccggcgcc 241
           ||||||||||||||||| |||||||
Sbjct: 109 cctggcgcgcgccgaggtcggcgcc 85
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>gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0036G02, from chromosome 3, complete sequence
          Length = 153308

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 156    accgctcgatgcgccgcgtgt 176
              |||||||||||||||||||||
Sbjct: 113182 accgctcgatgcgccgcgtgt 113162
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 222     cgcgcgccgaggccggcgcca 242
               |||||||||||||||||||||
Sbjct: 1413119 cgcgcgccgaggccggcgcca 1413099



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 283     ggccggcgacgacgcggcgc 302
               ||||||||||||||||||||
Sbjct: 2131561 ggccggcgacgacgcggcgc 2131580
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 220     ggcgcgcgccgaggccggcgc 240
               |||||||||||||||||||||
Sbjct: 1274325 ggcgcgcgccgaggccggcgc 1274305
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 193      cgccgccgccgccccggagttcgcc 217
                |||||||||||| ||||||||||||
Sbjct: 27926370 cgccgccgccgcgccggagttcgcc 27926394
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 156      accgctcgatgcgccgcgtgt 176
                |||||||||||||||||||||
Sbjct: 10555470 accgctcgatgcgccgcgtgt 10555450
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>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0453E03
          Length = 159980

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 193   cgccgccgccgccccggagttcgcc 217
             |||||||||||| ||||||||||||
Sbjct: 89728 cgccgccgccgcgccggagttcgcc 89752
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>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1343_D04
          Length = 143407

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 193   cgccgccgccgccccggagttcgcc 217
             |||||||||||| ||||||||||||
Sbjct: 15704 cgccgccgccgcgccggagttcgcc 15728
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>dbj|AK121731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082H10, full
            insert sequence
          Length = 1850

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 156  accgctcgatgcgccgcgtgt 176
            |||||||||||||||||||||
Sbjct: 1226 accgctcgatgcgccgcgtgt 1206
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>dbj|AK119594.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-D07, full
            insert sequence
          Length = 2009

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 156  accgctcgatgcgccgcgtgt 176
            |||||||||||||||||||||
Sbjct: 1397 accgctcgatgcgccgcgtgt 1377
to top
>dbj|AK111333.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-E06, full
           insert sequence
          Length = 811

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 193 cgccgccgccgccccggagttcgcc 217
           |||||||||||| ||||||||||||
Sbjct: 55  cgccgccgccgcgccggagttcgcc 79
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>dbj|AK064068.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-G08, full
           insert sequence
          Length = 875

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 156 accgctcgatgcgccgcgtgt 176
           |||||||||||||||||||||
Sbjct: 248 accgctcgatgcgccgcgtgt 228
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>gb|AF054585.1|AF054585 Streptomyces coelicolor indoleglycerol phosphate synthase (trpC),
           tryptophan synthase beta subunit (trpB), and tryptophan
           synthase alpha subunit (trpA) genes, complete cds; and
           unknown gene
          Length = 5093

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 223 gcgcgccgaggccggcgccaa 243
           |||||||||||||||||||||
Sbjct: 442 gcgcgccgaggccggcgccaa 462
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 206   ccggagttcgccctggcgcgc 226
             |||||||||||||||||||||
Sbjct: 93998 ccggagttcgccctggcgcgc 93978
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>dbj|D10358.1|KPNFOLA K. aerogenes folA and apaH genes
          Length = 1654

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 299  gcgcccgaggacgccccggcg 319
            |||||||||||||||||||||
Sbjct: 1129 gcgcccgaggacgccccggcg 1109
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>ref|XM_480271.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 684

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 186 ggcggagcgccgccgccgcc 205
           ||||||||||||||||||||
Sbjct: 356 ggcggagcgccgccgccgcc 337
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>ref|XM_467432.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1815

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 219 tggcgcgcgccgaggccggc 238
           ||||||||||||||||||||
Sbjct: 696 tggcgcgcgccgaggccggc 715
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>ref|NM_195889.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBb0052C09.12), mRNA
          Length = 942

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 226 cgccgaggccggcgccaacg 245
           ||||||||||||||||||||
Sbjct: 510 cgccgaggccggcgccaacg 529
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>ref|XM_473255.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2079

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 190 gagcgccgccgccgccccgg 209
           ||||||||||||||||||||
Sbjct: 120 gagcgccgccgccgccccgg 101
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>gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, complete sequence
          Length = 268984

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 182    ggctggcggagcgccgccgccgcc 205
              ||||||||||||| ||||||||||
Sbjct: 105617 ggctggcggagcgacgccgccgcc 105640
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>gb|AC090441.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNBb0052C09, complete sequence
          Length = 139468

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 226   cgccgaggccggcgccaacg 245
             ||||||||||||||||||||
Sbjct: 97540 cgccgaggccggcgccaacg 97559
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>gb|AC129306.5| Mus musculus BAC clone RP24-178A16 from chromosome 16, complete sequence
          Length = 167601

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 251    ctggtcttcctcatgcagtt 270
              ||||||||||||||||||||
Sbjct: 131615 ctggtcttcctcatgcagtt 131634
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>ref|XM_612729.2| PREDICTED: Bos taurus similar to VPS10 domain receptor protein
           SORCS 3 (LOC533349), mRNA
          Length = 1661

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 241 caacgaggatctggtcttcc 260
           ||||||||||||||||||||
Sbjct: 679 caacgaggatctggtcttcc 660
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>ref|XM_849537.1| PREDICTED: Canis familiaris similar to Tetraspanin-9 (Tspan-9)
           (Tetraspan NET-5) (LOC612996), mRNA
          Length = 993

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 224 cgcgccgaggccggcgccaa 243
           ||||||||||||||||||||
Sbjct: 160 cgcgccgaggccggcgccaa 179
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 224     cgcgccgaggccggcgccaa 243
               ||||||||||||||||||||
Sbjct: 1848628 cgcgccgaggccggcgccaa 1848647
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 278     ccggtggccggcgacgacgc 297
               ||||||||||||||||||||
Sbjct: 3752895 ccggtggccggcgacgacgc 3752876
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>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 325     cgtggccgtgtacaacgtca 344
               ||||||||||||||||||||
Sbjct: 1500754 cgtggccgtgtacaacgtca 1500773
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 283     ggccggcgacgacgcggcgc 302
               ||||||||||||||||||||
Sbjct: 4476942 ggccggcgacgacgcggcgc 4476961
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 283     ggccggcgacgacgcggcgc 302
               ||||||||||||||||||||
Sbjct: 1209154 ggccggcgacgacgcggcgc 1209173
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>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29
          Length = 299050

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 220    ggcgcgcgccgaggccggcg 239
              ||||||||||||||||||||
Sbjct: 248502 ggcgcgcgccgaggccggcg 248483
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 276     acccggtggccggcgacgac 295
               ||||||||||||||||||||
Sbjct: 3307324 acccggtggccggcgacgac 3307305



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 278     ccggtggccggcgacgacgc 297
               ||||||||||||||||||||
Sbjct: 1696168 ccggtggccggcgacgacgc 1696187
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>gb|AE005745.1| Caulobacter crescentus CB15 section 71 of 359 of the complete genome
          Length = 12357

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 226  cgccgaggccggcgccaacg 245
            ||||||||||||||||||||
Sbjct: 3296 cgccgaggccggcgccaacg 3277
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>gb|AE011959.1| Xanthomonas axonopodis pv. citri str. 306,  section 337 of 469 of the
            complete genome
          Length = 11092

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 278  ccggtggccggcgacgacgc 297
            ||||||||||||||||||||
Sbjct: 7727 ccggtggccggcgacgacgc 7708
to top
>gb|AE012487.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 395
            of 460 of the complete genome
          Length = 10967

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 199  cgccgccccggagttcgccc 218
            ||||||||||||||||||||
Sbjct: 7719 cgccgccccggagttcgccc 7700
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 199     cgccgccccggagttcgccc 218
               ||||||||||||||||||||
Sbjct: 4425323 cgccgccccggagttcgccc 4425304
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 190      gagcgccgccgccgccccgg 209
                ||||||||||||||||||||
Sbjct: 26369656 gagcgccgccgccgccccgg 26369637
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 226     cgccgaggccggcgccaacg 245
               ||||||||||||||||||||
Sbjct: 9745015 cgccgaggccggcgccaacg 9745034
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 286      cggcgacgacgcggcgcccg 305
                ||||||||||||||||||||
Sbjct: 13705204 cggcgacgacgcggcgcccg 13705185
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 186     ggcggagcgccgccgccgcc 205
               ||||||||||||||||||||
Sbjct: 4005382 ggcggagcgccgccgccgcc 4005363
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 278     ccggtggccggcgacgacgcggcg 301
               |||||||||||||||| |||||||
Sbjct: 7261928 ccggtggccggcgacgccgcggcg 7261951
to top
>gb|AF325723.1|AF325723 Pennisetum ciliare phosphate-induced protein 1-like protein mRNA,
           complete cds
          Length = 1160

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 108 ccgacgacgtcgccgtcgac 127
           ||||||||||||||||||||
Sbjct: 545 ccgacgacgtcgccgtcgac 564
to top
>dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0431F01
          Length = 143209

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 278   ccggtggccggcgacgacgcggcg 301
             |||||||||||||||| |||||||
Sbjct: 63358 ccggtggccggcgacgccgcggcg 63381
to top
>dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1038_A06
          Length = 147836

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   tggcgcgcgccgaggccggc 238
             ||||||||||||||||||||
Sbjct: 78489 tggcgcgcgccgaggccggc 78470
to top
>dbj|AP004161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1311_H06
          Length = 139868

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 219    tggcgcgcgccgaggccggc 238
              ||||||||||||||||||||
Sbjct: 134331 tggcgcgcgccgaggccggc 134312
to top
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 102     ggatgcccgacgacgtcgcc 121
               ||||||||||||||||||||
Sbjct: 2867414 ggatgcccgacgacgtcgcc 2867395
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 280     ggtggccggcgacgacgcgg 299
               ||||||||||||||||||||
Sbjct: 4812961 ggtggccggcgacgacgcgg 4812980
to top
>dbj|AP005904.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1040D06
          Length = 155034

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 286    cggcgacgacgcggcgcccg 305
              ||||||||||||||||||||
Sbjct: 103318 cggcgacgacgcggcgcccg 103299
to top
>gb|AE005156.1| Halobacterium sp. NRC-1 plasmid pNRC200 section 17 of 32 of the
            complete genome
          Length = 10091

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 181  cggctggcggagcgccgccg 200
            ||||||||||||||||||||
Sbjct: 4952 cggctggcggagcgccgccg 4933
to top
>dbj|AB154372.1| Ipomoea tricolor ItIVS gene for bHLH transcription activator Ivory
             seed, ivory seed-variegation (ivs-v) mutant alele
          Length = 13370

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   ctggcggagcgccgccgccg 203
             ||||||||||||||||||||
Sbjct: 10337 ctggcggagcgccgccgccg 10356
to top
>dbj|AB154371.1| Ipomoea tricolor ItIVS gene for bHLH transcription activator Ivory
            seed, complete cds
          Length = 10104

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 184  ctggcggagcgccgccgccg 203
            ||||||||||||||||||||
Sbjct: 7072 ctggcggagcgccgccgccg 7091
to top
>dbj|AB154370.1| Ipomoea tricolor ItIVS mRNA for bHLH transcription activator Ivory
            seed, complete cds
          Length = 2387

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 184  ctggcggagcgccgccgccg 203
            ||||||||||||||||||||
Sbjct: 1609 ctggcggagcgccgccgccg 1628
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>dbj|AB154369.1| Ipomoea purpurea IpIVS mRNA for bHLH transcription activator Ivory
            seed, complete cds
          Length = 2314

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 184  ctggcggagcgccgccgccg 203
            ||||||||||||||||||||
Sbjct: 1567 ctggcggagcgccgccgccg 1586
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>dbj|AP004560.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0462E11
          Length = 166115

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   ggcggagcgccgccgccgcc 205
             ||||||||||||||||||||
Sbjct: 92679 ggcggagcgccgccgccgcc 92660
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>dbj|AK070234.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044K18, full
           insert sequence
          Length = 1816

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 219 tggcgcgcgccgaggccggc 238
           ||||||||||||||||||||
Sbjct: 697 tggcgcgcgccgaggccggc 716
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>dbj|AK064945.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000P15, full
           insert sequence
          Length = 2455

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 190 gagcgccgccgccgccccgg 209
           ||||||||||||||||||||
Sbjct: 304 gagcgccgccgccgccccgg 285
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>gb|AF127374.1|AF127374 Streptomyces lavendulae LinA homolog, cytochrome P450 hydroxylase ORF4,
             cytochrome P450 hydroxylase ORF3, MitT (mitT), MitS
             (mitS), MitR (mitR), MitQ (mitQ), MitP (mitP), MitO
             (mitO), MitN (mitN), MitM (mitM), MitL (mitL), MitK
             (mitK), MitJ (mitJ), MitI (mitI), MitH (mitH), MitG
             (mitG), MitF (mitF), MitE (mitE), MitD (mitD), MitC
             (mitC), MitB (mitB), MitA (mitA), MmcA (mmcA), MmcB
             (mmcB), MmcC (mmcC), MmcD (mmcD), MmcE (mmcE), MmcF
             (mmcF), MmcG (mmcG), MmcH (mmcH), MmcI (mmcI), MmcJ
             (mmcJ), MmcK (mmcK), MmcL (mmcL), MmcM (mmcM), MmcN
             (mmcN), MmcO (mmcO), Mrd (mrd), MmcP (mmcP), MmcQ (mmcQ),
             MmcR (mmcR), MmcS (mmcS), MmcT (mmcT), MmcU (mmcU), MmcV
             (mmcV), Mct (mct), MmcW (mmcW), MmcX (mmcX), and MmcY
             (mmcY) genes, complete cds; and unknown genes
          Length = 63734

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 293   gacgcggcgcccgaggacgc 312
             ||||||||||||||||||||
Sbjct: 17233 gacgcggcgcccgaggacgc 17214
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 276     acccggtggccggcgacgac 295
               ||||||||||||||||||||
Sbjct: 3303472 acccggtggccggcgacgac 3303453



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 278     ccggtggccggcgacgacgc 297
               ||||||||||||||||||||
Sbjct: 1719728 ccggtggccggcgacgacgc 1719747
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 217     cctggcgcgcgccgaggccg 236
               ||||||||||||||||||||
Sbjct: 1952428 cctggcgcgcgccgaggccg 1952409
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 226     cgccgaggccggcgccaacg 245
               ||||||||||||||||||||
Sbjct: 9751054 cgccgaggccggcgccaacg 9751073
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>emb|AL662976.3|OSJN00177 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0074L08,
             complete sequence
          Length = 171551

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 190   gagcgccgccgccgccccgg 209
             ||||||||||||||||||||
Sbjct: 10289 gagcgccgccgccgccccgg 10270
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>emb|CT025520.10| Mouse DNA sequence from clone RP23-393E22 on chromosome 16, complete
              sequence
          Length = 220149

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 251    ctggtcttcctcatgcagtt 270
              ||||||||||||||||||||
Sbjct: 106484 ctggtcttcctcatgcagtt 106503
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>dbj|AB232775.1| Ipomoea nil InbHLH2 mRNA for bHLH transcriptional factor, complete
            cds, strain:TKS
          Length = 2309

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 184  ctggcggagcgccgccgccg 203
            ||||||||||||||||||||
Sbjct: 1590 ctggcggagcgccgccgccg 1609


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,277,388
Number of Sequences: 3902068
Number of extensions: 3277388
Number of successful extensions: 108255
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101893
Number of HSP's gapped (non-prelim): 6356
length of query: 371
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 349
effective length of database: 17,147,199,772
effective search space: 5984372720428
effective search space used: 5984372720428
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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