| Clone Name | bast03f04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 79.8 bits (40), Expect = 7e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 142 gcgagatcctcctgcgcgtgccggcggacgaccccgcgagcctcgtccgcgccgccgccg 201 ||||||||||||| ||| | ||| ||||||||||| || |||||||||||||| |||||| Sbjct: 23574999 gcgagatcctcctccgcatcccgccggacgaccccacgcgcctcgtccgcgcctccgccg 23574940 Query: 202 cctgcaagagctggcg 217 ||||||| ||||||| Sbjct: 23574939 tctgcaagcgctggcg 23574924 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 166 cggacgaccccgcgagcctcgtccgcgccgccgccgcctgcaag 209 ||||||||||||| | ||||||||||| | |||||| ||||||| Sbjct: 7783163 cggacgaccccgcaatcctcgtccgcgtctccgccgtctgcaag 7783206 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 tcgtccgcgccgccgccgcc 203 |||||||||||||||||||| Sbjct: 13148981 tcgtccgcgccgccgccgcc 13148962 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 gcctcgtccgcgccgccgccgcct 204 ||||||||||||||| |||||||| Sbjct: 1029324 gcctcgtccgcgccggcgccgcct 1029347
>dbj|AP003629.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481H08 Length = 146841 Score = 79.8 bits (40), Expect = 7e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 142 gcgagatcctcctgcgcgtgccggcggacgaccccgcgagcctcgtccgcgccgccgccg 201 ||||||||||||| ||| | ||| ||||||||||| || |||||||||||||| |||||| Sbjct: 55963 gcgagatcctcctccgcatcccgccggacgaccccacgcgcctcgtccgcgcctccgccg 55904 Query: 202 cctgcaagagctggcg 217 ||||||| ||||||| Sbjct: 55903 tctgcaagcgctggcg 55888
>ref|NM_197839.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0095C07.31), mRNA Length = 366 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 254 ccgcctgctcggcggcgcgccgcc 277 |||||||||||||||||||||||| Sbjct: 43 ccgcctgctcggcggcgcgccgcc 20
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 129 gaggacgtcatgcgcgagatcctc 152 |||||||||||||||||||||||| Sbjct: 2401595 gaggacgtcatgcgcgagatcctc 2401572
>gb|AC125782.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0095P22, complete sequence Length = 162766 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 254 ccgcctgctcggcggcgcgccgcc 277 |||||||||||||||||||||||| Sbjct: 79718 ccgcctgctcggcggcgcgccgcc 79695
>gb|AC145349.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0096I10, complete sequence Length = 171946 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 254 ccgcctgctcggcggcgcgccgcc 277 |||||||||||||||||||||||| Sbjct: 130380 ccgcctgctcggcggcgcgccgcc 130403
>gb|AC077693.19| Oryza sativa chromosome 10 BAC OSJNBa0095C07 genomic sequence, complete sequence Length = 187707 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 254 ccgcctgctcggcggcgcgccgcc 277 |||||||||||||||||||||||| Sbjct: 158227 ccgcctgctcggcggcgcgccgcc 158204
>dbj|AB108421.1| Oryza sativa (japonica cultivar-group) transposon, AnacB14, complete sequence Length = 7551 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 254 ccgcctgctcggcggcgcgccgcc 277 |||||||||||||||||||||||| Sbjct: 6896 ccgcctgctcggcggcgcgccgcc 6919
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 254 ccgcctgctcggcggcgcgccgcc 277 |||||||||||||||||||||||| Sbjct: 24278609 ccgcctgctcggcggcgcgccgcc 24278586 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tccgcgccgccgccgcctgc 206 |||||||||||||||||||| Sbjct: 19922030 tccgcgccgccgccgcctgc 19922049
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 254 ccgcctgctcggcggcgcgccgcc 277 |||||||||||||||||||||||| Sbjct: 22153283 ccgcctgctcggcggcgcgccgcc 22153260 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 gcgccgccgccgcctgcaag 209 |||||||||||||||||||| Sbjct: 7176348 gcgccgccgccgcctgcaag 7176367 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 182 cctcgtccgcgccgccgccgcctgcaag 209 ||||| |||||||||| ||||||||||| Sbjct: 2171258 cctcgcccgcgccgcctccgcctgcaag 2171285
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 254 ccgcctgctcggcggcgcgccgcc 277 |||||||||||||||||||||||| Sbjct: 3355959 ccgcctgctcggcggcgcgccgcc 3355936 Score = 46.1 bits (23), Expect = 0.10 Identities = 62/75 (82%) Strand = Plus / Minus Query: 143 cgagatcctcctgcgcgtgccggcggacgaccccgcgagcctcgtccgcgccgccgccgc 202 |||||||||||| | | | ||| ||||||| |||||| ||||||||||||| || || Sbjct: 1088136 cgagatcctcctccacatcccgccggacgatcccgcgtccctcgtccgcgcctccctcgt 1088077 Query: 203 ctgcaagagctggcg 217 ||||||| ||||||| Sbjct: 1088076 ctgcaagcgctggcg 1088062 Score = 40.1 bits (20), Expect = 6.3 Identities = 44/52 (84%) Strand = Plus / Minus Query: 143 cgagatcctcctgcgcgtgccggcggacgaccccgcgagcctcgtccgcgcc 194 |||||||||||| ||| | ||| ||||||| ||||| ||||||||||||| Sbjct: 1083387 cgagatcctcctccgcatcccgccggacgagcccgcatccctcgtccgcgcc 1083336
>dbj|AP004651.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0091G06 Length = 161851 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 166 cggacgaccccgcgagcctcgtccgcgccgccgccgcctgcaag 209 ||||||||||||| | ||||||||||| | |||||| ||||||| Sbjct: 95661 cggacgaccccgcaatcctcgtccgcgtctccgccgtctgcaag 95704
>dbj|AK107824.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-G05, full insert sequence Length = 945 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 254 ccgcctgctcggcggcgcgccgcc 277 |||||||||||||||||||||||| Sbjct: 69 ccgcctgctcggcggcgcgccgcc 46
>dbj|AK063029.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-C02, full insert sequence Length = 528 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 254 ccgcctgctcggcggcgcgccgcc 277 |||||||||||||||||||||||| Sbjct: 69 ccgcctgctcggcggcgcgccgcc 46
>dbj|AK062375.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-A12, full insert sequence Length = 639 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 254 ccgcctgctcggcggcgcgccgcc 277 |||||||||||||||||||||||| Sbjct: 68 ccgcctgctcggcggcgcgccgcc 45
>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1714_H10 Length = 191580 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 254 ccgcctgctcggcggcgcgccgcc 277 |||||||||||||||||||||||| Sbjct: 165652 ccgcctgctcggcggcgcgccgcc 165629
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 254 ccgcctgctcggcggcgcgccgcc 277 |||||||||||||||||||||||| Sbjct: 22165346 ccgcctgctcggcggcgcgccgcc 22165323 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 gcgccgccgccgcctgcaag 209 |||||||||||||||||||| Sbjct: 7179644 gcgccgccgccgcctgcaag 7179663 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 182 cctcgtccgcgccgccgccgcctgcaag 209 ||||| |||||||||| ||||||||||| Sbjct: 2171209 cctcgcccgcgccgcctccgcctgcaag 2171236
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 254 ccgcctgctcggcggcgcgccgcc 277 |||||||||||||||||||||||| Sbjct: 24590278 ccgcctgctcggcggcgcgccgcc 24590255 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tccgcgccgccgccgcctgc 206 |||||||||||||||||||| Sbjct: 20207009 tccgcgccgccgccgcctgc 20207028
>ref|XM_465000.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1236 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 182 cctcgtccgcgccgccgccgcctgcaagagctggc 216 |||||||||||||||||||| ||||| | |||||| Sbjct: 111 cctcgtccgcgccgccgccgtctgcaggcgctggc 145
>ref|NM_193472.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1578 Score = 46.1 bits (23), Expect = 0.10 Identities = 62/75 (82%) Strand = Plus / Plus Query: 143 cgagatcctcctgcgcgtgccggcggacgaccccgcgagcctcgtccgcgccgccgccgc 202 |||||||||||| ||| | || | ||||| ||||| |||||| ||||||| |||||| Sbjct: 300 cgagatcctcctccgcctcccccccgacgagcccgcctgcctcgcccgcgcctccgccgt 359 Query: 203 ctgcaagagctggcg 217 ||||||| ||||||| Sbjct: 360 ctgcaagcgctggcg 374
>ref|XM_476423.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1377 Score = 46.1 bits (23), Expect = 0.10 Identities = 62/75 (82%) Strand = Plus / Plus Query: 143 cgagatcctcctgcgcgtgccggcggacgaccccgcgagcctcgtccgcgccgccgccgc 202 |||||||||||| | | | ||| ||||||| |||||| ||||||||||||| || || Sbjct: 75 cgagatcctcctccacatcccgccggacgatcccgcgtccctcgtccgcgcctccctcgt 134 Query: 203 ctgcaagagctggcg 217 ||||||| ||||||| Sbjct: 135 ctgcaagcgctggcg 149
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 182 cctcgtccgcgccgccgccgcctgcaagagctggc 216 |||||||||||||||||||| ||||| | |||||| Sbjct: 10853517 cctcgtccgcgccgccgccgtctgcaggcgctggc 10853551 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 cctcgtccgcgccgccgccg 201 |||||||||||||||||||| Sbjct: 35691563 cctcgtccgcgccgccgccg 35691582 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ctcggcggcgcgccgcccat 280 |||||||||||||||||||| Sbjct: 6542365 ctcggcggcgcgccgcccat 6542346
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.10 Identities = 62/75 (82%) Strand = Plus / Plus Query: 143 cgagatcctcctgcgcgtgccggcggacgaccccgcgagcctcgtccgcgccgccgccgc 202 |||||||||||| ||| | || | ||||| ||||| |||||| ||||||| |||||| Sbjct: 21064728 cgagatcctcctccgcctcccccccgacgagcccgcctgcctcgcccgcgcctccgccgt 21064787 Query: 203 ctgcaagagctggcg 217 ||||||| ||||||| Sbjct: 21064788 ctgcaagcgctggcg 21064802 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gcgccgccgccgcctgcaag 209 |||||||||||||||||||| Sbjct: 21969004 gcgccgccgccgcctgcaag 21968985
>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144D11 Length = 157943 Score = 46.1 bits (23), Expect = 0.10 Identities = 62/75 (82%) Strand = Plus / Plus Query: 143 cgagatcctcctgcgcgtgccggcggacgaccccgcgagcctcgtccgcgccgccgccgc 202 |||||||||||| ||| | || | ||||| ||||| |||||| ||||||| |||||| Sbjct: 32273 cgagatcctcctccgcctcccccccgacgagcccgcctgcctcgcccgcgcctccgccgt 32332 Query: 203 ctgcaagagctggcg 217 ||||||| ||||||| Sbjct: 32333 ctgcaagcgctggcg 32347
>dbj|AP003372.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1014_G12 Length = 158830 Score = 46.1 bits (23), Expect = 0.10 Identities = 62/75 (82%) Strand = Plus / Plus Query: 143 cgagatcctcctgcgcgtgccggcggacgaccccgcgagcctcgtccgcgccgccgccgc 202 |||||||||||| ||| | || | ||||| ||||| |||||| ||||||| |||||| Sbjct: 127930 cgagatcctcctccgcctcccccccgacgagcccgcctgcctcgcccgcgcctccgccgt 127989 Query: 203 ctgcaagagctggcg 217 ||||||| ||||||| Sbjct: 127990 ctgcaagcgctggcg 128004
>dbj|AP004168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1756_H07 Length = 217205 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 182 cctcgtccgcgccgccgccgcctgcaagagctggc 216 |||||||||||||||||||| ||||| | |||||| Sbjct: 59716 cctcgtccgcgccgccgccgtctgcaggcgctggc 59750
>dbj|AK107254.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-G06, full insert sequence Length = 1377 Score = 46.1 bits (23), Expect = 0.10 Identities = 62/75 (82%) Strand = Plus / Plus Query: 143 cgagatcctcctgcgcgtgccggcggacgaccccgcgagcctcgtccgcgccgccgccgc 202 |||||||||||| | | | ||| ||||||| |||||| ||||||||||||| || || Sbjct: 75 cgagatcctcctccacatcccgccggacgatcccgcgtccctcgtccgcgcctccctcgt 134 Query: 203 ctgcaagagctggcg 217 ||||||| ||||||| Sbjct: 135 ctgcaagcgctggcg 149
>dbj|AK107049.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-C12, full insert sequence Length = 1677 Score = 46.1 bits (23), Expect = 0.10 Identities = 62/75 (82%) Strand = Plus / Plus Query: 143 cgagatcctcctgcgcgtgccggcggacgaccccgcgagcctcgtccgcgccgccgccgc 202 |||||||||||| ||| | || | ||||| ||||| |||||| ||||||| |||||| Sbjct: 112 cgagatcctcctccgcctcccccccgacgagcccgcctgcctcgcccgcgcctccgccgt 171 Query: 203 ctgcaagagctggcg 217 ||||||| ||||||| Sbjct: 172 ctgcaagcgctggcg 186
>dbj|AP004262.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0022B05 Length = 151317 Score = 46.1 bits (23), Expect = 0.10 Identities = 62/75 (82%) Strand = Plus / Minus Query: 143 cgagatcctcctgcgcgtgccggcggacgaccccgcgagcctcgtccgcgccgccgccgc 202 |||||||||||| | | | ||| ||||||| |||||| ||||||||||||| || || Sbjct: 85724 cgagatcctcctccacatcccgccggacgatcccgcgtccctcgtccgcgcctccctcgt 85665 Query: 203 ctgcaagagctggcg 217 ||||||| ||||||| Sbjct: 85664 ctgcaagcgctggcg 85650 Score = 40.1 bits (20), Expect = 6.3 Identities = 44/52 (84%) Strand = Plus / Minus Query: 143 cgagatcctcctgcgcgtgccggcggacgaccccgcgagcctcgtccgcgcc 194 |||||||||||| ||| | ||| ||||||| ||||| ||||||||||||| Sbjct: 80975 cgagatcctcctccgcatcccgccggacgagcccgcatccctcgtccgcgcc 80924
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 181 gcctcgtccgcgccgccgccgc 202 |||||||||||||||||||||| Sbjct: 2172350 gcctcgtccgcgccgccgccgc 2172329
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 181 gcctcgtccgcgccgccgccgc 202 |||||||||||||||||||||| Sbjct: 334034 gcctcgtccgcgccgccgccgc 334013
>emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete genome; segment 1/29 Length = 299050 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 383 cgccctcgactcccggcacggc 404 |||||||||||||||||||||| Sbjct: 239540 cgccctcgactcccggcacggc 239519
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 181 gcctcgtccgcgccgccgccgc 202 |||||||||||||||||||||| Sbjct: 1990735 gcctcgtccgcgccgccgccgc 1990756
>gb|AE001826.1| Deinococcus radiodurans R1 plasmid MP1, complete sequence Length = 177466 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 188 ccgcgccgccgccgcctgcaag 209 |||||||||||||||||||||| Sbjct: 110860 ccgcgccgccgccgcctgcaag 110881
>ref|XM_463145.1| Oryza sativa (japonica cultivar-group), mRNA Length = 891 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 169 acgaccccgcgagcctcgtccgcgccgccgccgcctgcaag 209 ||||||||||| |||||||||| | | |||||| ||||||| Sbjct: 68 acgaccccgcgcgcctcgtccgggtctccgccgtctgcaag 108
>gb|AC135500.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0034J04 map S1466, complete sequence Length = 140012 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 169 acgaccccgcgagcctcgtccgcgccgccgccgcctgcaag 209 ||||||||||| |||||||||| | | |||||| ||||||| Sbjct: 36916 acgaccccgcgcgcctcgtccgggtctccgccgtctgcaag 36956
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 169 acgaccccgcgagcctcgtccgcgccgccgccgcctgcaag 209 ||||||||||| |||||||||| | | |||||| ||||||| Sbjct: 22766985 acgaccccgcgcgcctcgtccgggtctccgccgtctgcaag 22767025 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 188 ccgcgccgccgccgcctgcaa 208 ||||||||||||||||||||| Sbjct: 1185259 ccgcgccgccgccgcctgcaa 1185239 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 ccgcgccgccgccgcctgca 207 |||||||||||||||||||| Sbjct: 14914599 ccgcgccgccgccgcctgca 14914618
>gb|AC135501.4| Oryza sativa chromosome 3 BAC OSJNBb0011J16 genomic sequence, complete sequence Length = 124170 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 169 acgaccccgcgagcctcgtccgcgccgccgccgcctgcaag 209 ||||||||||| |||||||||| | | |||||| ||||||| Sbjct: 104648 acgaccccgcgcgcctcgtccgggtctccgccgtctgcaag 104688
>ref|XM_843488.1| PREDICTED: Canis familiaris similar to neuron navigator 1, transcript variant 2 (LOC490238), mRNA Length = 6475 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 cctcgtccgcgccgccgccgc 202 ||||||||||||||||||||| Sbjct: 67 cctcgtccgcgccgccgccgc 47
>ref|XM_851360.1| PREDICTED: Canis familiaris similar to neuron navigator 1, transcript variant 4 (LOC490238), mRNA Length = 6409 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 cctcgtccgcgccgccgccgc 202 ||||||||||||||||||||| Sbjct: 67 cctcgtccgcgccgccgccgc 47
>ref|XM_851319.1| PREDICTED: Canis familiaris similar to neuron navigator 1, transcript variant 3 (LOC490238), mRNA Length = 5517 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 cctcgtccgcgccgccgccgc 202 ||||||||||||||||||||| Sbjct: 67 cctcgtccgcgccgccgccgc 47
>ref|XM_547359.2| PREDICTED: Canis familiaris similar to neuron navigator 1, transcript variant 1 (LOC490238), mRNA Length = 6466 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 cctcgtccgcgccgccgccgc 202 ||||||||||||||||||||| Sbjct: 67 cctcgtccgcgccgccgccgc 47
>emb|CR649294.2|CNS0EZYS Tetraodon nigroviridis full-length cDNA Length = 1597 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 agcccgcctccgccgcgccac 101 ||||||||||||||||||||| Sbjct: 133 agcccgcctccgccgcgccac 153
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 182 cctcgtccgcgccgccgccgc 202 ||||||||||||||||||||| Sbjct: 4132627 cctcgtccgcgccgccgccgc 4132647
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 154 tgcgcgtgccggcggacgaccccgc 178 ||||||||||||||| ||||||||| Sbjct: 307045 tgcgcgtgccggcggccgaccccgc 307069
>emb|AL137127.7| Human DNA sequence from clone RP5-1126H10 on chromosome 1p34.3-35.3 Contains the 3' end of the gene for retinoblastoma-associated factor 600 (RBAF600), complete sequence Length = 98832 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 314 ctggatctcccacttcctccc 334 ||||||||||||||||||||| Sbjct: 13711 ctggatctcccacttcctccc 13691
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29 Length = 283100 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 385 ccctcgactcccggcacggcc 405 ||||||||||||||||||||| Sbjct: 9970 ccctcgactcccggcacggcc 9990
>gb|AC105363.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1705B08, complete sequence Length = 100986 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 188 ccgcgccgccgccgcctgcaa 208 ||||||||||||||||||||| Sbjct: 88963 ccgcgccgccgccgcctgcaa 88943
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 179 gagcctcgtccgcgccgccgccgcc 203 ||||| ||||||||||||||||||| Sbjct: 1393109 gagccccgtccgcgccgccgccgcc 1393133
>emb|AJ581847.1|ASP581847 Anodontia sp. ARED partial 18S rRNA gene, specimen voucher ARED Length = 1114 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 155 gcgcgtgccggcggacgaccccgcg 179 ||||||||||||| ||||||||||| Sbjct: 274 gcgcgtgccggcgtacgaccccgcg 250
>emb|AJ581843.1|AOM581843 Anodontia omissa partial 18S rRNA gene, specimen voucher COM_G Length = 1114 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 155 gcgcgtgccggcggacgaccccgcg 179 ||||||||||||| ||||||||||| Sbjct: 274 gcgcgtgccggcgtacgaccccgcg 250
>emb|AJ581841.1|ABU581841 Anodontia bullula partial 18S rRNA gene, specimen voucher ABUL Length = 1114 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 155 gcgcgtgccggcggacgaccccgcg 179 ||||||||||||| ||||||||||| Sbjct: 274 gcgcgtgccggcgtacgaccccgcg 250
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 gcctcgtccgcgccgccgccg 201 ||||||||||||||||||||| Sbjct: 17928976 gcctcgtccgcgccgccgccg 17928996 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 cgcgccgccgccgcctgcaa 208 |||||||||||||||||||| Sbjct: 18977856 cgcgccgccgccgcctgcaa 18977875
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 169 acgaccccgcgagcctcgtccgcgccgccgccgcctgcaag 209 ||||||||||| |||||||||| | | |||||| ||||||| Sbjct: 22760013 acgaccccgcgcgcctcgtccgggtctccgccgtctgcaag 22760053 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 188 ccgcgccgccgccgcctgcaa 208 ||||||||||||||||||||| Sbjct: 1185257 ccgcgccgccgccgcctgcaa 1185237 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 ccgcgccgccgccgcctgca 207 |||||||||||||||||||| Sbjct: 14909133 ccgcgccgccgccgcctgca 14909152
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 gcctcgtccgcgccgccgccg 201 ||||||||||||||||||||| Sbjct: 5502949 gcctcgtccgcgccgccgccg 5502929
>dbj|AP005555.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1118_B06 Length = 106678 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 gcctcgtccgcgccgccgccg 201 ||||||||||||||||||||| Sbjct: 79795 gcctcgtccgcgccgccgccg 79815
>dbj|AB093554.1| Streptomyces laurentii plasmid pSLS DNA, complete sequence Length = 15397 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 250 cctaccgcctgctcggcggcg 270 ||||||||||||||||||||| Sbjct: 8938 cctaccgcctgctcggcggcg 8918
>ref|XM_550541.1| Oryza sativa (japonica cultivar-group), mRNA Length = 945 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 gcctcgtccgcgccgccgccgcct 204 ||||||||||||||| |||||||| Sbjct: 770 gcctcgtccgcgccggcgccgcct 747
>ref|XM_528760.1| PREDICTED: Pan troglodytes inositol 1,4,5-triphosphate receptor, type 2 (LOC473389), mRNA Length = 8652 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 caccaccgaatgcgccccca 37 |||||||||||||||||||| Sbjct: 4044 caccaccgaatgcgccccca 4025
>ref|XM_514955.1| PREDICTED: Pan troglodytes similar to ATP-binding cassette, sub-family G, member 1 (White protein homolog) (ATP-binding cassette transporter 8) (LOC458623), mRNA Length = 764 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 agcctcgtccgcgccgccgccgcc 203 |||||||||| ||||||||||||| Sbjct: 97 agcctcgtccccgccgccgccgcc 120
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 acccgccgccggagctgcca 128 |||||||||||||||||||| Sbjct: 220748 acccgccgccggagctgcca 220767
>ref|NM_195466.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OJ1004_F02.7), mRNA Length = 810 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gcgccgccgccgcctgcaag 209 |||||||||||||||||||| Sbjct: 374 gcgccgccgccgcctgcaag 355
>ref|XM_468528.1| Oryza sativa (japonica cultivar-group), mRNA Length = 372 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 cctcgtccgcgccgccgccg 201 |||||||||||||||||||| Sbjct: 156 cctcgtccgcgccgccgccg 175
>ref|XM_464657.1| Oryza sativa (japonica cultivar-group), mRNA Length = 516 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 261 ctcggcggcgcgccgcccat 280 |||||||||||||||||||| Sbjct: 361 ctcggcggcgcgccgcccat 380
>ref|NM_194191.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1125 Score = 40.1 bits (20), Expect = 6.3 Identities = 44/52 (84%) Strand = Plus / Plus Query: 143 cgagatcctcctgcgcgtgccggcggacgaccccgcgagcctcgtccgcgcc 194 |||||||||||| ||| | ||| ||||||| ||||| ||||||||||||| Sbjct: 39 cgagatcctcctccgcatcccgccggacgagcccgcatccctcgtccgcgcc 90
>ref|XM_474592.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1350 Score = 40.1 bits (20), Expect = 6.3 Identities = 56/68 (82%) Strand = Plus / Plus Query: 142 gcgagatcctcctgcgcgtgccggcggacgaccccgcgagcctcgtccgcgccgccgccg 201 ||||||||||| | ||| | ||| | ||||||||||| ||||| |||||||| || || Sbjct: 50 gcgagatcctcgtccgcctcccgcccgacgaccccgcctgcctcctccgcgcctccctcg 109 Query: 202 cctgcaag 209 |||||||| Sbjct: 110 cctgcaag 117
>ref|XM_470755.1| Oryza sativa (japonica cultivar-group), mRNA Length = 567 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 188 ccgcgccgccgccgcctgca 207 |||||||||||||||||||| Sbjct: 356 ccgcgccgccgccgcctgca 375
>gb|AC099404.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0019D02, complete sequence Length = 154692 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 cgcgccgccgccgcctgcaa 208 |||||||||||||||||||| Sbjct: 23120 cgcgccgccgccgcctgcaa 23139
>gb|AC092387.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJ1004_F02 map C8, complete sequence Length = 116304 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 gcgccgccgccgcctgcaag 209 |||||||||||||||||||| Sbjct: 32966 gcgccgccgccgcctgcaag 32985
>gb|AC079843.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0013J21, complete sequence Length = 155290 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 182 cctcgtccgcgccgccgccgcctgcaag 209 ||||| |||||||||| ||||||||||| Sbjct: 149398 cctcgcccgcgccgcctccgcctgcaag 149425
>gb|AC116393.10| Mus musculus chromosome 15, clone RP23-94I16, complete sequence Length = 217156 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 tcgtccgcgccgccgccgcc 203 |||||||||||||||||||| Sbjct: 127339 tcgtccgcgccgccgccgcc 127358
>ref|XM_363010.1| Magnaporthe grisea 70-15 predicted protein (MG08427.4) partial cds Length = 2343 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 cggcacggcctcgccctctt 415 |||||||||||||||||||| Sbjct: 120 cggcacggcctcgccctctt 139
>gb|AY881693.1| Baboon herpesvirus 2 strain 860 ICP22 (US1), US2 (US2), protein kinase (US3), glycoprotein G (US4), glycoprotein J (US5), glycoprotein D (US6), glycoprotein I (US7), glycoprotein E (US8), US8.5 (US8.5), US9 (US9), US10 (US10), tegument protein (US11), and ICP47 (US12) genes, complete cds Length = 15072 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 ctcgtccgcgccgccgccgc 202 |||||||||||||||||||| Sbjct: 1870 ctcgtccgcgccgccgccgc 1889
>ref|XM_870750.1| PREDICTED: Bos taurus similar to Mafa homolog (LOC618421), mRNA Length = 540 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 tcgtccgcgccgccgccgcc 203 |||||||||||||||||||| Sbjct: 182 tcgtccgcgccgccgccgcc 163
>ref|XM_590296.2| PREDICTED: Bos taurus similar to CG11146-PA (LOC512726), mRNA Length = 1755 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 agcctcgtccgcgccgccgccgcc 203 |||| ||||||||||||||||||| Sbjct: 1627 agccgcgtccgcgccgccgccgcc 1650
>ref|NM_002223.2| Homo sapiens inositol 1,4,5-triphosphate receptor, type 2 (ITPR2), mRNA Length = 12568 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 caccaccgaatgcgccccca 37 |||||||||||||||||||| Sbjct: 4065 caccaccgaatgcgccccca 4046
>gb|AC136956.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038B22, complete sequence Length = 177557 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 tccgcgccgccgccgcctgc 206 |||||||||||||||||||| Sbjct: 99097 tccgcgccgccgccgcctgc 99116
>gb|AC084022.10| Oryza sativa chromosome 3 BAC OSJNBa0011H24 genomic sequence, complete sequence Length = 137184 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ccgcgccgccgccgcctgca 207 |||||||||||||||||||| Sbjct: 128163 ccgcgccgccgccgcctgca 128144
>emb|CR812847.5| Zebrafish DNA sequence from clone DKEY-9I15 in linkage group 14, complete sequence Length = 230522 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 260 gctcggcggcgcgccgccca 279 |||||||||||||||||||| Sbjct: 176829 gctcggcggcgcgccgccca 176810
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 cctcgtccgcgccgccgccg 201 |||||||||||||||||||| Sbjct: 1127997 cctcgtccgcgccgccgccg 1128016
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 182 cctcgtccgcgccgccgccgcctgcaag 209 ||||| |||||||||| ||||||||||| Sbjct: 2171258 cctcgcccgcgccgcctccgcctgcaag 2171285
>emb|X79146.1|SLLINC S.lincolnensis (78-11) Lincomycin production genes Length = 36270 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 gcctcgtccgcgccgccgcc 200 |||||||||||||||||||| Sbjct: 5480 gcctcgtccgcgccgccgcc 5499
>emb|BX572606.1| Rhodopseudomonas palustris CGA009 complete genome; segment 14/16 Length = 349841 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 cctgctcggcggcgcgccgc 276 |||||||||||||||||||| Sbjct: 129325 cctgctcggcggcgcgccgc 129306
>emb|AL662949.4|OSJN00144 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0115I21, complete sequence Length = 127162 Score = 40.1 bits (20), Expect = 6.3 Identities = 56/68 (82%) Strand = Plus / Minus Query: 142 gcgagatcctcctgcgcgtgccggcggacgaccccgcgagcctcgtccgcgccgccgccg 201 ||||||||||| | ||| | ||| | ||||||||||| ||||| |||||||| || || Sbjct: 88157 gcgagatcctcgtccgcctcccgcccgacgaccccgcctgcctcctccgcgcctccctcg 88098 Query: 202 cctgcaag 209 |||||||| Sbjct: 88097 cctgcaag 88090
>gb|BC029158.1| Homo sapiens ATP-binding cassette, sub-family G (WHITE), member 1, transcript variant 2, mRNA (cDNA clone MGC:34313 IMAGE:5198758), complete cds Length = 2996 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 agcctcgtccgcgccgccgccgcc 203 |||||||||| ||||||||||||| Sbjct: 57 agcctcgtccccgccgccgccgcc 80
>ref|NM_194350.1| Mus musculus v-maf musculoaponeurotic fibrosarcoma oncogene family, protein A (avian) (Mafa), mRNA Length = 1080 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 tcgtccgcgccgccgccgcc 203 |||||||||||||||||||| Sbjct: 530 tcgtccgcgccgccgccgcc 511
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 cctgctcggcggcgcgccgc 276 |||||||||||||||||||| Sbjct: 4330551 cctgctcggcggcgcgccgc 4330532 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 257 cctgctcggcggcgcgccgc 276 |||||||||||||||||||| Sbjct: 3933365 cctgctcggcggcgcgccgc 3933346
>gb|AC092172.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0014J14, complete sequence Length = 191397 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 gcgccgccgccgcctgcaag 209 |||||||||||||||||||| Sbjct: 1706 gcgccgccgccgcctgcaag 1725
>dbj|AB097434.1| Oryza sativa (japonica cultivar-group) transposon AnacA7(PCF8) DNA, complete sequence Length = 1508 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gcgccgccgccgcctgcaag 209 |||||||||||||||||||| Sbjct: 860 gcgccgccgccgcctgcaag 841
>dbj|AB097433.1| Oryza sativa (japonica cultivar-group) transposon AnacA6(PCF8) DNA, complete sequence Length = 1530 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gcgccgccgccgcctgcaag 209 |||||||||||||||||||| Sbjct: 879 gcgccgccgccgcctgcaag 860
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ccgcgccgccgccgcctgca 207 |||||||||||||||||||| Sbjct: 335916 ccgcgccgccgccgcctgca 335897
>gb|AF430401.1| Azoarcus sp. BH72 putative ammonium transporter (amtY) gene, complete cds Length = 1391 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 cggcctcgccctcttctacg 420 |||||||||||||||||||| Sbjct: 221 cggcctcgccctcttctacg 240
>gb|AC084762.8| Oryza sativa chromosome 3 BAC OSJNBa0013O08 genomic sequence, complete sequence Length = 148021 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 ccgcgccgccgccgcctgca 207 |||||||||||||||||||| Sbjct: 18169 ccgcgccgccgccgcctgca 18150
>gb|AC023425.20| Homo sapiens 12 BAC RP11-350G2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181829 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 caccaccgaatgcgccccca 37 |||||||||||||||||||| Sbjct: 151743 caccaccgaatgcgccccca 151762
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gcgccgccgccgcctgcaag 209 |||||||||||||||||||| Sbjct: 1015348 gcgccgccgccgcctgcaag 1015329
>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome Length = 195859 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 accgcctgctcggcggcgcg 272 |||||||||||||||||||| Sbjct: 159229 accgcctgctcggcggcgcg 159248
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 241 tcgcccccgcctaccgcctgctcggcgg 268 ||||| ||||| |||||||||||||||| Sbjct: 1596050 tcgccgccgccgaccgcctgctcggcgg 1596023
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.3 Identities = 56/68 (82%) Strand = Plus / Plus Query: 142 gcgagatcctcctgcgcgtgccggcggacgaccccgcgagcctcgtccgcgccgccgccg 201 ||||||||||| | ||| | ||| | ||||||||||| ||||| |||||||| || || Sbjct: 4529321 gcgagatcctcgtccgcctcccgcccgacgaccccgcctgcctcctccgcgcctccctcg 4529380 Query: 202 cctgcaag 209 |||||||| Sbjct: 4529381 cctgcaag 4529388
>gb|AF323643.1|F323639S05 Homo sapiens ATP-binding cassette transporter G1 (ABCG1) gene, exon 5 Length = 2089 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 agcctcgtccgcgccgccgccgcc 203 |||||||||| ||||||||||||| Sbjct: 1978 agcctcgtccccgccgccgccgcc 2001
>gb|AC015555.13|AC015555 Homo sapiens chromosome 21 clone RP11-113F1, complete sequence Length = 181511 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 agcctcgtccgcgccgccgccgcc 203 |||||||||| ||||||||||||| Sbjct: 176359 agcctcgtccccgccgccgccgcc 176336
>ref|XM_345846.2| PREDICTED: Rattus norvegicus similar to pancreatic beta-cell specific transcriptional activator (LOC366949), mRNA Length = 1086 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 tcgtccgcgccgccgccgcc 203 |||||||||||||||||||| Sbjct: 536 tcgtccgcgccgccgccgcc 517
>gb|AC169379.4| Sorghum bicolor clone SB_BBc0088B22, complete sequence Length = 105215 Score = 40.1 bits (20), Expect = 6.3 Identities = 44/52 (84%) Strand = Plus / Minus Query: 143 cgagatcctcctgcgcgtgccggcggacgaccccgcgagcctcgtccgcgcc 194 |||| ||||||| || || || |||||||| |||||| ||||||||||||| Sbjct: 84387 cgaggtcctcctccgtgtccccgcggacgagcccgcgcacctcgtccgcgcc 84336
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 ctggccgcccgcgacctcga 373 |||||||||||||||||||| Sbjct: 70821 ctggccgcccgcgacctcga 70840
>dbj|AP003457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0660D08 Length = 146915 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 gcctcgtccgcgccgccgccgcct 204 ||||||||||||||| |||||||| Sbjct: 5547 gcctcgtccgcgccggcgccgcct 5570
>dbj|AP003564.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0062J13 Length = 152837 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 gcctcgtccgcgccgccgccgcct 204 ||||||||||||||| |||||||| Sbjct: 92197 gcctcgtccgcgccggcgccgcct 92220
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 tcgtccgcgccgccgccgcc 203 |||||||||||||||||||| Sbjct: 66169 tcgtccgcgccgccgccgcc 66150
>dbj|AP003308.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1129G05 Length = 132535 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 190 gcgccgccgccgcctgcaag 209 |||||||||||||||||||| Sbjct: 50812 gcgccgccgccgcctgcaag 50793
>dbj|AK173790.1| Ciona intestinalis cDNA, clone:citb014g10, full insert sequence Length = 1027 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 aaaccaaatccctcgacaaa 57 |||||||||||||||||||| Sbjct: 100 aaaccaaatccctcgacaaa 119
>dbj|AP005846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1307A11 Length = 131538 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 ctcggcggcgcgccgcccat 280 |||||||||||||||||||| Sbjct: 102978 ctcggcggcgcgccgcccat 102959
>dbj|AP004043.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_D06 Length = 102239 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 cctcgtccgcgccgccgccg 201 |||||||||||||||||||| Sbjct: 52177 cctcgtccgcgccgccgccg 52196
>dbj|BS000227.1| Pan troglodytes chromosome 22 clone:PTB-059D22, map 22, complete sequences Length = 148847 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 agcctcgtccgcgccgccgccgcc 203 |||||||||| ||||||||||||| Sbjct: 104614 agcctcgtccccgccgccgccgcc 104637
>dbj|AK120969.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040M24, full insert sequence Length = 1702 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 tcgtccgcgccgccgccgcc 203 |||||||||||||||||||| Sbjct: 393 tcgtccgcgccgccgccgcc 412
>emb|X64651.1|SLLMBA S.lincolnensis lmbA gene for lincomycin condensing protein Length = 1900 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 gcctcgtccgcgccgccgcc 200 |||||||||||||||||||| Sbjct: 1750 gcctcgtccgcgccgccgcc 1769
>dbj|AK072354.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061A21, full insert sequence Length = 2173 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 cgcgccgccgccgcctgcaa 208 |||||||||||||||||||| Sbjct: 1300 cgcgccgccgccgcctgcaa 1281
>dbj|AK069878.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035G04, full insert sequence Length = 1646 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 182 cctcgtccgcgccgccgccgcctgcaag 209 ||||| |||||||||| ||||||||||| Sbjct: 195 cctcgcccgcgccgcctccgcctgcaag 222
>gb|DQ149153.1| Cercopithecine herpesvirus 16 strain X313, complete genome Length = 156487 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 ctcgtccgcgccgccgccgc 202 |||||||||||||||||||| Sbjct: 135976 ctcgtccgcgccgccgccgc 135995
>dbj|AK059487.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-G02, full insert sequence Length = 1348 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 tcgtccgcgccgccgccgcc 203 |||||||||||||||||||| Sbjct: 40 tcgtccgcgccgccgccgcc 59
>gb|AY105409.1| Zea mays PCO095801 mRNA sequence Length = 741 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 184 tcgtccgcgccgccgccgcc 203 |||||||||||||||||||| Sbjct: 53 tcgtccgcgccgccgccgcc 72
>ref|NM_004915.3| Homo sapiens ATP-binding cassette, sub-family G (WHITE), member 1 (ABCG1), transcript variant 4, mRNA Length = 3018 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 agcctcgtccgcgccgccgccgcc 203 |||||||||| ||||||||||||| Sbjct: 57 agcctcgtccccgccgccgccgcc 80
>ref|NM_016818.2| Homo sapiens ATP-binding cassette, sub-family G (WHITE), member 1 (ABCG1), transcript variant 2, mRNA Length = 2982 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 agcctcgtccgcgccgccgccgcc 203 |||||||||| ||||||||||||| Sbjct: 57 agcctcgtccccgccgccgccgcc 80
>emb|AJ289137.1|HSA289137 Homo sapiens partial ABCG1 gene for ATP-binding cassette transporter, sub-family G, member 1, promoter region, exon 1 and joined CDS Length = 1610 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 agcctcgtccgcgccgccgccgcc 203 |||||||||| ||||||||||||| Sbjct: 1471 agcctcgtccccgccgccgccgcc 1494
>dbj|AP001746.1| Homo sapiens genomic DNA, chromosome 21q, section 90/105 Length = 340000 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 agcctcgtccgcgccgccgccgcc 203 |||||||||| ||||||||||||| Sbjct: 53071 agcctcgtccccgccgccgccgcc 53094
>dbj|D26350.1|HUMHT2I Homo sapiens mRNA for type 2 inositol 1,4,5-trisphosphate receptor, complete cds Length = 10524 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 caccaccgaatgcgccccca 37 |||||||||||||||||||| Sbjct: 4066 caccaccgaatgcgccccca 4047
>dbj|AB086961.1| Mus musculus MafA gene for pancreatic beta-cell specific transcriptional activator, complete cds Length = 1080 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 tcgtccgcgccgccgccgcc 203 |||||||||||||||||||| Sbjct: 530 tcgtccgcgccgccgccgcc 511
>dbj|AK114524.1| Ciona intestinalis cDNA, clone:cieg005d07, full insert sequence Length = 2437 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 aaaccaaatccctcgacaaa 57 |||||||||||||||||||| Sbjct: 1516 aaaccaaatccctcgacaaa 1535
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 254 ccgcctgctcggcggcgcgc 273 |||||||||||||||||||| Sbjct: 1223888 ccgcctgctcggcggcgcgc 1223907
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 tcgtccgcgccgccgccgcctgca 207 |||||||||||||| ||||||||| Sbjct: 708904 tcgtccgcgccgcctccgcctgca 708881
>dbj|AP001622.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1430A10, MX1-D21S171 region, complete sequence Length = 149850 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 agcctcgtccgcgccgccgccgcc 203 |||||||||| ||||||||||||| Sbjct: 78340 agcctcgtccccgccgccgccgcc 78363
>dbj|AB038161.1| Homo sapiens ABCG1 gene for ABC transporter (ATP-binding cassette, sub-family G (WHITE), member 1), complete cds Length = 81000 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 agcctcgtccgcgccgccgccgcc 203 |||||||||| ||||||||||||| Sbjct: 1023 agcctcgtccccgccgccgccgcc 1046 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,545,670 Number of Sequences: 3902068 Number of extensions: 3545670 Number of successful extensions: 116995 Number of sequences better than 10.0: 129 Number of HSP's better than 10.0 without gapping: 143 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 109187 Number of HSP's gapped (non-prelim): 7808 length of query: 467 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 445 effective length of database: 17,147,199,772 effective search space: 7630503898540 effective search space used: 7630503898540 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)