ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast02g05 |
|---|---|
| Clone Library Name | barley_pub |
>PFPB_RICCO (Q41141) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase| beta subunit (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate-dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) Length = 552 Score = 126 bits (316), Expect = 2e-29 Identities = 65/95 (68%), Positives = 75/95 (78%), Gaps = 2/95 (2%) Frame = +1 Query: 139 ASVYSEVQTSRIAHMLPLPSVLRSHFTLADGPASTAAGSPDEIAKLFPCLYGQPSASVVP 318 ASVYSEVQ+SRI H+LPLPSVL F + GP S+AAG+PDEIAKLFP L+GQPSA +VP Sbjct: 10 ASVYSEVQSSRIEHVLPLPSVLNHPFKIVQGPPSSAAGNPDEIAKLFPNLFGQPSAMLVP 69 Query: 319 TAEPV--ATKPLKIGVVLSGGQAPGGHNVICGIFD 417 + + LKIG+VLSGGQAPGGHNVI GIFD Sbjct: 70 DVADSLDSNQQLKIGLVLSGGQAPGGHNVISGIFD 104
>PFPB_SOLTU (P21343) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase| beta subunit (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) Length = 552 Score = 125 bits (315), Expect = 3e-29 Identities = 65/95 (68%), Positives = 74/95 (77%), Gaps = 2/95 (2%) Frame = +1 Query: 139 ASVYSEVQTSRIAHMLPLPSVLRSHFTLADGPASTAAGSPDEIAKLFPCLYGQPSASVVP 318 A+VYSEVQ SR+ H LPLPSVL S F + DGP S+AAG P+EIAKLFP LYGQP S+VP Sbjct: 10 AAVYSEVQNSRLDHPLPLPSVLGSPFKVVDGPPSSAAGHPEEIAKLFPSLYGQPHVSLVP 69 Query: 319 --TAEPVATKPLKIGVVLSGGQAPGGHNVICGIFD 417 + + + LKIGVVLSGGQAPGGHNVI GIFD Sbjct: 70 DDSGDVAMNQILKIGVVLSGGQAPGGHNVISGIFD 104
>PFPA_SOLTU (P21342) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase| alpha subunit (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate-dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) Length = 616 Score = 50.8 bits (120), Expect = 1e-06 Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 10/99 (10%) Frame = +1 Query: 151 SEVQTSRIAHMLPLPSVLRSHFTLADGPASTAAGSP---DEIAKLFPCLYGQPSA----- 306 S++Q R + LP L+ + +T A P I + FP YGQP A Sbjct: 12 SDLQKLRSHYHPELPPCLQGTTVRVELRDATTAADPAGEHTIKRFFPHTYGQPLAHFLRA 71 Query: 307 -SVVPTAEPVATKP-LKIGVVLSGGQAPGGHNVICGIFD 417 + VP A+ + P +++GV+ G Q+PGGHNVI G+ D Sbjct: 72 TAKVPDAQIITEHPAIRVGVLFCGRQSPGGHNVIWGLHD 110
>PFPA_RICCO (Q41140) Pyrophosphate--fructose 6-phosphate 1-phosphotransferase| alpha subunit (EC 2.7.1.90) (PFP) (6-phosphofructokinase, pyrophosphate dependent) (Pyrophosphate-dependent 6-phosphofructose-1-kinase) (PPi-PFK) Length = 617 Score = 49.7 bits (117), Expect = 3e-06 Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 10/97 (10%) Frame = +1 Query: 151 SEVQTSRIAHMLPLPSVLRS---HFTLADGPASTAAGSPDEIAKLFPCLYGQPSASVVPT 321 S++Q R + LP L+ L DG + + I++ FP YGQP A + Sbjct: 12 SDLQKLRSLYKPELPPCLQGTTVRVELGDGTTACSEAGAHTISRSFPHTYGQPLAHFLRA 71 Query: 322 AEPVATK-------PLKIGVVLSGGQAPGGHNVICGI 411 VA +++GVV G Q+PGGHNV+ G+ Sbjct: 72 TAKVADAHIISEHPAMRVGVVFCGRQSPGGHNVVWGL 108
>TEGU_HHV11 (P10220) Large tegument protein (Virion protein UL36)| Length = 3164 Score = 31.6 bits (70), Expect = 0.78 Identities = 21/63 (33%), Positives = 26/63 (41%) Frame = +1 Query: 202 LRSHFTLADGPASTAAGSPDEIAKLFPCLYGQPSASVVPTAEPVATKPLKIGVVLSGGQA 381 L S + AD A +P E P P +V P A P + P + L GG A Sbjct: 2816 LPSPWDPADPTAPVLGRNPAEPTSSSPAGPSPPPPAVQPVAPPPTSGPPPTYLTLEGGVA 2875 Query: 382 PGG 390 PGG Sbjct: 2876 PGG 2878
>GON2_HUMAN (O43555) Progonadoliberin-2 precursor (Progonadoliberin II)| [Contains: Gonadoliberin-2 (Gonadoliberin II) (Luteinizing hormone-releasing hormone II) (LH-RH II) (Gonadotropin-releasing hormone II) (GnRH II) (Luliberin II); GnRH-associated pepti Length = 120 Score = 31.2 bits (69), Expect = 1.0 Identities = 17/51 (33%), Positives = 26/51 (50%) Frame = -2 Query: 281 GNSLAISSGLPAAVLAGPSARVKWERRTEGRGSMCAMRLVCTSLYTDARRP 129 G+ + + GLP+ LA + WE RT + S+ R + +L T AR P Sbjct: 60 GSPVQTAHGLPSDALAPLDDSMPWEGRTTAQWSLHRKRHLARTLLTAAREP 110
>ZN524_MOUSE (Q9D0B1) Zinc finger protein 524| Length = 321 Score = 30.0 bits (66), Expect = 2.3 Identities = 18/43 (41%), Positives = 22/43 (51%) Frame = -2 Query: 377 WPPESTTPILSGFVATGSAVGTTEADGWP*RQGNSLAISSGLP 249 WP STT LSGF A GSA G ++G +S G+P Sbjct: 261 WPISSTTSPLSGFTAGGSA-GAGRG-----QEGQDTLVSGGIP 297
>CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48)| Length = 2441 Score = 29.6 bits (65), Expect = 2.9 Identities = 23/70 (32%), Positives = 29/70 (41%) Frame = +1 Query: 175 AHMLPLPSVLRSHFTLADGPASTAAGSPDEIAKLFPCLYGQPSASVVPTAEPVATKPLKI 354 A LP P V +S PASTAAG P P+A + +P A P + Sbjct: 842 ASQLPCPPVTQSPLHPTPPPASTAAGMPS---------LQHPTAPGMTPPQPAA--PTQP 890 Query: 355 GVVLSGGQAP 384 +S GQ P Sbjct: 891 STPVSSGQTP 900
>MNT_HUMAN (Q99583) Max-binding protein MNT (Protein ROX) (Myc antagonist MNT)| Length = 582 Score = 29.6 bits (65), Expect = 2.9 Identities = 27/105 (25%), Positives = 37/105 (35%) Frame = +1 Query: 31 LQISPPAPPHRQPHRIXXXXXXXXXXXXXXXXXXXLASVYSEVQTSRIAHMLPLPSVLRS 210 L +SPPAPP P + T ++P+P V S Sbjct: 65 LPLSPPAPPPAPPPPLA---------------------------TPAPLTVIPIPVVTNS 97 Query: 211 HFTLADGPASTAAGSPDEIAKLFPCLYGQPSASVVPTAEPVATKP 345 L P AA P +A P L G P S+ A P+ ++P Sbjct: 98 PQPLPPPPPLPAAAQPLPLAPRQPALVGAPGLSIKEPA-PLPSRP 141
>IF4G2_RABIT (P79398) Eukaryotic translation initiation factor 4 gamma 2| (eIF-4-gamma 2) (eIF-4G 2) (eIF4G 2) (p97) (Novel APOBEC-1 target 1) (Translation repressor NAT1) Length = 907 Score = 29.6 bits (65), Expect = 2.9 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = -2 Query: 407 PQITLCPPGAWPPESTTPIL 348 PQIT+ PP A PP + TP L Sbjct: 492 PQITMIPPSAQPPRTQTPPL 511
>IF4G2_HUMAN (P78344) Eukaryotic translation initiation factor 4 gamma 2| (eIF-4-gamma 2) (eIF-4G 2) (eIF4G 2) (p97) (Death-associated protein 5) (DAP-5) Length = 907 Score = 29.6 bits (65), Expect = 2.9 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = -2 Query: 407 PQITLCPPGAWPPESTTPIL 348 PQIT+ PP A PP + TP L Sbjct: 492 PQITMIPPSAQPPRTQTPPL 511
>IF4G2_MOUSE (Q62448) Eukaryotic translation initiation factor 4 gamma 2| (eIF-4-gamma 2) (eIF-4G 2) (eIF4G 2) (p97) (Novel APOBEC-1 target 1) (Translation repressor NAT1) Length = 906 Score = 29.6 bits (65), Expect = 2.9 Identities = 12/20 (60%), Positives = 14/20 (70%) Frame = -2 Query: 407 PQITLCPPGAWPPESTTPIL 348 PQIT+ PP A PP + TP L Sbjct: 491 PQITMIPPSAQPPRTQTPPL 510
>GON2_MACMU (O97655) Progonadoliberin-2 precursor (Progonadoliberin II)| [Contains: Gonadoliberin-2 (Gonadoliberin II) (Luteinizing hormone-releasing hormone II) (LH-RH II) (Gonadotropin-releasing hormone II) (GnRH II) (Luliberin II); GnRH-associated pepti Length = 114 Score = 28.9 bits (63), Expect = 5.0 Identities = 17/51 (33%), Positives = 24/51 (47%) Frame = -2 Query: 281 GNSLAISSGLPAAVLAGPSARVKWERRTEGRGSMCAMRLVCTSLYTDARRP 129 G+ + GLP+ LA + WE RT S+ R + +L T AR P Sbjct: 54 GSPAQATYGLPSDALAHLEDSMPWEGRTMAWWSLRRKRYLAQTLLTAAREP 104
>PGCA_HUMAN (P16112) Aggrecan core protein precursor (Cartilage-specific| proteoglycan core protein) (CSPCP) (Chondroitin sulfate proteoglycan core protein 1) [Contains: Aggrecan core protein 2] Length = 2415 Score = 28.5 bits (62), Expect = 6.6 Identities = 16/47 (34%), Positives = 24/47 (51%) Frame = -2 Query: 350 LSGFVATGSAVGTTEADGWP*RQGNSLAISSGLPAAVLAGPSARVKW 210 LSG A+G G ++ G G+ L + SGLP +G R++W Sbjct: 885 LSGDRASGLPSGDLDSSGLTSTVGSGLTVESGLP----SGDEERIEW 927
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 28.1 bits (61), Expect = 8.6 Identities = 21/75 (28%), Positives = 28/75 (37%) Frame = -2 Query: 416 SKMPQITLCPPGAWPPESTTPILSGFVATGSAVGTTEADGWP*RQGNSLAISSGLPAAVL 237 S P T PP +T S V SA+GTT P N+ A + G + Sbjct: 3906 SSTPGTTPIPPELTTTATTPAATSSTVTPSSALGTTHTPPVP----NTTATTHGRSLSPS 3961 Query: 236 AGPSARVKWERRTEG 192 + + R W T G Sbjct: 3962 SPHTVRTAWTSATSG 3976
>Y3013_COLP3 (Q47ZQ7) UPF0085 protein CPS_3013| Length = 269 Score = 28.1 bits (61), Expect = 8.6 Identities = 17/61 (27%), Positives = 26/61 (42%) Frame = +1 Query: 202 LRSHFTLADGPASTAAGSPDEIAKLFPCLYGQPSASVVPTAEPVATKPLKIGVVLSGGQA 381 +RS F ++DG A T+ + LFP + + S + T E +I S G Sbjct: 1 MRSAFYISDGTAITSEVFGHALLSLFPTEFEHHTISFIETTEKALAAKERINKATSRGGK 60 Query: 382 P 384 P Sbjct: 61 P 61 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.134 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,363,675 Number of Sequences: 219361 Number of extensions: 625274 Number of successful extensions: 2744 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 2639 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2735 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2228238148 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
