ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast02b08 |
|---|---|
| Clone Library Name | barley_pub |
>PGIP1_ORYSA (Q8GT95) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (Floral organ regulator 1) Length = 332 Score = 164 bits (415), Expect = 1e-40 Identities = 76/90 (84%), Positives = 83/90 (92%) Frame = +2 Query: 188 RCPQADRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDEAGRVNNVFIDGADDVHG 367 RCP +D+QAL+RVKQ+LGNPATL TWS ASADCC WDH+RCDEAGRVNNVFIDGA+DV G Sbjct: 26 RCPPSDKQALMRVKQSLGNPATLSTWSLASADCCEWDHVRCDEAGRVNNVFIDGANDVRG 85 Query: 368 QIPSALAGLTALMSLSLFRLPGLQGSIPAC 457 QIPSA+AGLTALMSLSLFRLPGL G IPAC Sbjct: 86 QIPSAVAGLTALMSLSLFRLPGLSGPIPAC 115
>PGIP2_PHAVU (P58822) Polygalacturonase inhibitor 2 precursor| (Polygalacturonase-inhibiting protein) (PGIP-2) Length = 342 Score = 60.1 bits (144), Expect = 3e-09 Identities = 39/93 (41%), Positives = 53/93 (56%), Gaps = 6/93 (6%) Frame = +2 Query: 191 CPQADRQALLRVKQALGNPATLKTWSPASADCC--TWDHLRCD---EAGRVNNVFIDGAD 355 C D+QALL++K+ LGNP TL +W P + DCC TW + CD + RVNN+ + G + Sbjct: 32 CNPQDKQALLQIKKDLGNPTTLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLN 90 Query: 356 -DVHGQIPSALAGLTALMSLSLFRLPGLQGSIP 451 IPS+LA L L L + + L G IP Sbjct: 91 LPKPYPIPSSLANLPYLNFLYIGGINNLVGPIP 123
>PGIP3_PHAVU (P58823) Polygalacturonase inhibitor 3 precursor| (Polygalacturonase-inhibiting protein) (PGIP-2) (PGIP-3) Length = 342 Score = 59.7 bits (143), Expect = 3e-09 Identities = 39/93 (41%), Positives = 53/93 (56%), Gaps = 6/93 (6%) Frame = +2 Query: 191 CPQADRQALLRVKQALGNPATLKTWSPASADCC--TWDHLRCD---EAGRVNNVFIDGAD 355 C D+QALL++K+ LGNP TL +W P + DCC TW + CD + RVNN+ + G + Sbjct: 32 CNPQDKQALLQIKKDLGNPTTLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGHN 90 Query: 356 -DVHGQIPSALAGLTALMSLSLFRLPGLQGSIP 451 IPS+LA L L L + + L G IP Sbjct: 91 LPKPYPIPSSLANLPYLNFLYIGGINNLVGPIP 123
>PGIP1_PHAVU (P35334) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (PGIP-1) Length = 342 Score = 59.7 bits (143), Expect = 3e-09 Identities = 39/93 (41%), Positives = 53/93 (56%), Gaps = 6/93 (6%) Frame = +2 Query: 191 CPQADRQALLRVKQALGNPATLKTWSPASADCC--TWDHLRCD---EAGRVNNVFIDGAD 355 C D+QALL++K+ LGNP TL +W P + DCC TW + CD + RVNN+ + G + Sbjct: 32 CNPQDKQALLQIKKDLGNPTTLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGHN 90 Query: 356 -DVHGQIPSALAGLTALMSLSLFRLPGLQGSIP 451 IPS+LA L L L + + L G IP Sbjct: 91 LPKPYPIPSSLANLPYLNFLYIGGINNLVGPIP 123
>PGIP_PYRCO (Q05091) Polygalacturonase inhibitor precursor| (Polygalacturonase-inhibiting protein) Length = 330 Score = 58.2 bits (139), Expect = 1e-08 Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 1/87 (1%) Frame = +2 Query: 191 CPQADRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDE-AGRVNNVFIDGADDVHG 367 C D++ LL++K+A G+P L +W + DCC W + CD R+N++ I A V G Sbjct: 27 CNPDDKKVLLQIKKAFGDPYVLASWK-SDTDCCDWYCVTCDSTTNRINSLTI-FAGQVSG 84 Query: 368 QIPSALAGLTALMSLSLFRLPGLQGSI 448 QIP+ + L L +L + P L G I Sbjct: 85 QIPALVGDLPYLETLEFHKQPNLTGPI 111
>PGIP2_ARATH (Q9M5J8) Polygalacturonase inhibitor 2 precursor| (Polygalacturonase-inhibiting protein) (PGIP-2) Length = 330 Score = 57.8 bits (138), Expect = 1e-08 Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 4/90 (4%) Frame = +2 Query: 191 CPQADRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDEA---GRVNNVFI-DGADD 358 C + D+ LL++K++L NP L +W P DCC+W L C +A RV ++ I DG + Sbjct: 25 CHKDDKTTLLKIKKSLNNPYHLASWDP-KTDCCSWYCLECGDATVNHRVTSLIIQDG--E 81 Query: 359 VHGQIPSALAGLTALMSLSLFRLPGLQGSI 448 + GQIP + L L SL +L L G I Sbjct: 82 ISGQIPPEVGDLPYLTSLIFRKLTNLTGHI 111
>PGIP1_ARATH (Q9M5J9) Polygalacturonase inhibitor 1 precursor| (Polygalacturonase-inhibiting protein) (PGIP-1) Length = 330 Score = 56.2 bits (134), Expect = 4e-08 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 3/89 (3%) Frame = +2 Query: 191 CPQADRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDEA---GRVNNVFIDGADDV 361 C Q D+ LL++K++L NP L +W P DCC+W L C +A RV + I + + Sbjct: 25 CNQNDKNTLLKIKKSLNNPYHLASWDP-QTDCCSWYCLECGDATVNHRVTALTI-FSGQI 82 Query: 362 HGQIPSALAGLTALMSLSLFRLPGLQGSI 448 GQIP+ + L L +L +L L G+I Sbjct: 83 SGQIPAEVGDLPYLETLVFRKLSNLTGTI 111
>DR100_ARATH (Q00874) DNA-damage-repair/toleration protein DRT100 precursor| Length = 372 Score = 48.5 bits (114), Expect = 8e-06 Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 16/105 (15%) Frame = +2 Query: 191 CPQADRQALLRVKQALGNP--ATLKTWSPASADCCT-WDHLRCD-EAGRVNNVFIDGADD 358 C D+ AL K +L P TWS + DCC W + CD ++GRV ++ + G + Sbjct: 27 CSPKDQTALNAFKSSLSEPNLGIFNTWSE-NTDCCKEWYGISCDPDSGRVTDISLRGESE 85 Query: 359 ------------VHGQIPSALAGLTALMSLSLFRLPGLQGSIPAC 457 + G I A+ LTAL SL L G+ G IP C Sbjct: 86 DAIFQKAGRSGYMSGSIDPAVCDLTALTSLVLADWKGITGEIPPC 130
>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1| precursor (EC 2.7.11.1) (BRI1-associated receptor kinase 1) (Somatic embryogenesis receptor-like kinase 3) Length = 615 Score = 42.7 bits (99), Expect = 4e-04 Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 24/109 (22%) Frame = +2 Query: 200 ADRQALLRVKQALGNP-ATLKTWSPASADCCTWDHLRCDEAGRVNNVFIDGA-------- 352 A+ AL +K +L +P L++W CTW H+ C+ V V + A Sbjct: 27 AEGDALSALKNSLADPNKVLQSWDATLVTPCTWFHVTCNSDNSVTRVDLGNANLSGQLVM 86 Query: 353 ---------------DDVHGQIPSALAGLTALMSLSLFRLPGLQGSIPA 454 +++ G IP L LT L+SL L+ L L G IP+ Sbjct: 87 QLGQLPNLQYLELYSNNITGTIPEQLGNLTELVSLDLY-LNNLSGPIPS 134
>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor| (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS MICROSPOROCYTES1 protein) Length = 1192 Score = 39.3 bits (90), Expect = 0.005 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 1/74 (1%) Frame = +2 Query: 200 ADRQALLRVKQALGNPATLKTWS-PASADCCTWDHLRCDEAGRVNNVFIDGADDVHGQIP 376 ++ +L+ K++L NP+ L +W+ +SA C W + C GRVN++ + + GQIP Sbjct: 25 SETTSLISFKRSLENPSLLSSWNVSSSASHCDWVGVTC-LLGRVNSLSLPSL-SLRGQIP 82 Query: 377 SALAGLTALMSLSL 418 ++ L L L L Sbjct: 83 KEISSLKNLRELCL 96
>TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precursor (EC| 2.7.11.1) Length = 942 Score = 35.0 bits (79), Expect = 0.092 Identities = 26/84 (30%), Positives = 40/84 (47%) Frame = +2 Query: 203 DRQALLRVKQALGNPATLKTWSPASADCCTWDHLRCDEAGRVNNVFIDGADDVHGQIPSA 382 D A+L +K++L NP + WS D C W H+ C RV + I G + G + Sbjct: 28 DLSAMLSLKKSL-NPPSSFGWS--DPDPCKWTHIVCTGTKRVTRIQI-GHSGLQGTLSPD 83 Query: 383 LAGLTALMSLSLFRLPGLQGSIPA 454 L L+ L L L + + G +P+ Sbjct: 84 LRNLSELERLEL-QWNNISGPVPS 106
>EFTUB_NICSY (Q43364) Elongation factor TuB, chloroplast precursor (EF-TuB)| Length = 485 Score = 31.2 bits (69), Expect = 1.3 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 5/52 (9%) Frame = -1 Query: 441 PWSPGRRNSDSDMSAVSPAKADGIWPCTSSAPSMKTLF-----TRPASSHRR 301 P+SP +S S+ +AV P+ + + +S P+ TLF T P+++H R Sbjct: 20 PYSPSSSSSSSNTAAVFPSNSSKLILSSSFTPTPSTLFLHSPTTTPSTTHPR 71
>UBA3_YEAST (Q99344) NEDD8-activating enzyme E1 catalytic subunit (EC 6.3.2.-)| (Ubiquitin-activating enzyme E1 3) (RUB1-activating enzyme E1) (Ubiquitin-like protein-activating enzyme) Length = 299 Score = 30.8 bits (68), Expect = 1.7 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = +2 Query: 338 FIDGADD-VHGQIPSALAGLTALMSLSLFRLPGLQGSIPAC 457 FIDG + + G + + + G+TA S+ LP Q ++P C Sbjct: 128 FIDGGTEGLKGHVKTIIPGITACWECSIDTLPSQQDTVPMC 168
>PCX1_HUMAN (Q96RV3) Pecanex-like protein 1 (Pecanex homolog)| Length = 2341 Score = 30.4 bits (67), Expect = 2.3 Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 9/98 (9%) Frame = -1 Query: 456 QAGMEPWSPGRRNSDSDMSAVSPAK-------ADGIWPCTSSAPSMKTLFTRPASSHRRW 298 Q+G+ SP R + S S ++ G PC S+ S +L P+S R Sbjct: 2110 QSGLVRQSPARASVASQSSYCYSSRHSSLRMSTTGFVPCRRSSTSQISLRNLPSSIQSRL 2169 Query: 297 SHVQQSADAGDHVFSVA--GLPSACFTRSSACRSACGH 190 S V Q +G + GLPS+ + SS AC H Sbjct: 2170 SMVNQMEPSGQSGLACVQHGLPSS--SSSSQSIPACKH 2205
>SO1A6_MOUSE (Q99J94) Solute carrier organic anion transporter family member 1A6| (Solute carrier family 21 member 13) (Kidney-specific organic anion-transporting polypeptide 5) (OATP-5) Length = 670 Score = 30.0 bits (66), Expect = 2.9 Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 6/86 (6%) Frame = +2 Query: 188 RCPQADRQALLRVKQAL------GNPATLKTWSPASADCCTWDHLRCDEAGRVNNVFIDG 349 RC +++ ++L QA G PA + + C W L+C E G + Sbjct: 537 RCMKSEEKSLGIGLQAFFMRLFAGIPAPIYFGALIDRTCLHWGTLKCGEPGACRTYEVSS 596 Query: 350 ADDVHGQIPSALAGLTALMSLSLFRL 427 ++ +P+AL G L S + RL Sbjct: 597 FRRLYLGLPAALRGSIILPSFFILRL 622
>DRL39_ARATH (Q9LVT1) Putative disease resistance protein At5g47280| Length = 623 Score = 29.6 bits (65), Expect = 3.8 Identities = 12/39 (30%), Positives = 26/39 (66%) Frame = +2 Query: 323 RVNNVFIDGADDVHGQIPSALAGLTALMSLSLFRLPGLQ 439 ++ ++ ID DD+ ++PS + G+T+L S+S+ P ++ Sbjct: 464 KLTDITIDYCDDL-AELPSTICGITSLNSISITNCPNIK 501
>PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (EC 2.7.11.1)| (Phytosulfokine LRR receptor kinase) Length = 1008 Score = 29.3 bits (64), Expect = 5.0 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Frame = +2 Query: 266 SPASADCCTWDHLRC--DEAGRVNNVFIDGADDVHGQIPSALAGLTALMSLSLFR 424 S +S DCC W + C + GRV + + G + G++ +L L + L+L R Sbjct: 56 SSSSTDCCNWTGITCNSNNTGRVIRLEL-GNKKLSGKLSESLGKLDEIRVLNLSR 109
>PTN13_MOUSE (Q64512) Tyrosine-protein phosphatase non-receptor type 13 (EC| 3.1.3.48) (Protein tyrosine phosphatase PTP-BL) (Protein-tyrosine phosphatase RIP) (protein tyrosine phosphatase DPZPTP) (PTP36) Length = 2453 Score = 29.3 bits (64), Expect = 5.0 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%) Frame = -1 Query: 435 SPGRRNSDSDMSAVSPAKA--DGIWPCTSSAPSMKTLFTRPASSHRRWSHV 289 SP RRN +SD S P +A G+ +S S + F + H+RWS V Sbjct: 1025 SPERRNHESDSSTEDPGQAYVVGMSLPSSGKSSSQVPFKDNDTLHKRWSIV 1075
>SO1A4_MOUSE (Q9EP96) Solute carrier organic anion transporter family member 1A4| (Solute carrier family 21 member 5) (Sodium-independent organic anion-transporting polypeptide 2) Length = 670 Score = 28.9 bits (63), Expect = 6.6 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 6/71 (8%) Frame = +2 Query: 239 GNPATLKTWSPASADCCTWDHLRCDEAGRVNNVFIDGADDVHGQIPSALAGLTALMSLSL 418 G PA + + C W L+C E G I+ ++ +P+AL G + L +L + Sbjct: 560 GIPAPIYFGALIDRTCLHWGTLKCGEPGACRMYDINSFRRIYLGLPAALRGASFLPALFI 619 Query: 419 ------FRLPG 433 F+ PG Sbjct: 620 LILMRKFQFPG 630
>DRL29_ARATH (Q9SZA7) Probable disease resistance protein At4g33300| Length = 832 Score = 28.5 bits (62), Expect = 8.6 Identities = 16/43 (37%), Positives = 27/43 (62%) Frame = +2 Query: 323 RVNNVFIDGADDVHGQIPSALAGLTALMSLSLFRLPGLQGSIP 451 ++ ++ ID DD+ +PS++ GLT+L LS+ P L G +P Sbjct: 673 KLGDLTIDHCDDLVA-LPSSICGLTSLSCLSITNCPRL-GELP 713
>YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in chromosome I| Length = 536 Score = 28.5 bits (62), Expect = 8.6 Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Frame = -1 Query: 411 SDMSAVSPAKADGIWPCTSSAPSMKTLFTRPASSHRRWSHVQQSA-DAGDHVFSVAGLPS 235 S S +S + A I +SS+P + FT PASS S V S+ + S+ S Sbjct: 44 SSSSMLSSSSATAISSSSSSSPLSSSSFTSPASSSFITSLVSSSSQQSSSSSASLTSSSS 103 Query: 234 ACFTRSSA 211 A T SS+ Sbjct: 104 ATLTSSSS 111
>SO1A5_RAT (O88397) Solute carrier organic anion transporter family member 1A5| (Solute carrier family 21 member 7) (Sodium-independent organic anion transporter 3) (Organic anion-transporting polypeptide 3) (OATP3) Length = 670 Score = 28.5 bits (62), Expect = 8.6 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 6/71 (8%) Frame = +2 Query: 239 GNPATLKTWSPASADCCTWDHLRCDEAGRVNNVFIDGADDVHGQIPSALAGLTALMSLSL 418 G PA + + C W L+C E G I+ ++ +P+AL G + L +L + Sbjct: 560 GIPAPIYFGALIDRTCLHWGTLKCGEPGACRMYNINNFRRIYLVLPAALRGSSYLPALFI 619 Query: 419 ------FRLPG 433 F+ PG Sbjct: 620 LILMRKFQFPG 630 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 29,498,326 Number of Sequences: 219361 Number of extensions: 410111 Number of successful extensions: 1747 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 1706 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1743 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
