ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast02b03 |
|---|---|
| Clone Library Name | barley_pub |
>S35B1_HUMAN (P78383) Solute carrier family 35 member B1 (UDP-galactose| transporter-related protein 1) (UGTrel1) (hUGTrel1) Length = 322 Score = 36.2 bits (82), Expect = 0.044 Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 2/45 (4%) Frame = +1 Query: 211 RCALAVVGIMSTLLVYGVLQEKLMRVPY--GAEKEFFRYSLFLVF 339 R L +G+ YG+LQEK+ R Y GA++E F ++L LVF Sbjct: 13 RLPLCFLGVFVCYFYYGILQEKITRGKYGEGAKQETFTFALTLVF 57
>S35B1_BOVIN (Q8MII5) Solute carrier family 35 member B1 (Endoplasmic reticulum| nucleotide sugar transporter 1) Length = 322 Score = 36.2 bits (82), Expect = 0.044 Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 2/45 (4%) Frame = +1 Query: 211 RCALAVVGIMSTLLVYGVLQEKLMRVPY--GAEKEFFRYSLFLVF 339 R L +G+ YG+LQEK+ R Y GA++E F ++L LVF Sbjct: 13 RLPLCFLGVFVCYFYYGILQEKITRGKYGEGAKQETFTFALTLVF 57
>S35B2_DROME (Q9VEI3) Adenosine 3'-phospho 5'-phosphosulfate transporter 1 (PAPS| transporter 1) (Protein slalom) Length = 465 Score = 35.8 bits (81), Expect = 0.058 Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 3/71 (4%) Frame = +1 Query: 148 DEPALPVAAGRDKDERRRLMGRCALAVVGIMSTLLVYGVLQEKLMRVPY---GAEKEFFR 318 D PA A R + + C G+M + L +GVLQEK+M Y E F+ Sbjct: 126 DRPAASTAPKRTSSQEAVQLLWC---FGGLMISYLTWGVLQEKIMTQNYLNFTGESAKFK 182 Query: 319 YSLFLVFCNRI 351 S FLVF NR+ Sbjct: 183 DSQFLVFSNRL 193
>HUT1_YARLI (Q6C4X5) UDP-galactose transporter homolog 1| Length = 365 Score = 35.8 bits (81), Expect = 0.058 Identities = 15/38 (39%), Positives = 24/38 (63%) Frame = +1 Query: 220 LAVVGIMSTLLVYGVLQEKLMRVPYGAEKEFFRYSLFL 333 + V GI ++ L + VLQE++ PYG + + FR SL + Sbjct: 47 ICVSGIYASFLTWAVLQERIATTPYGPDNKIFRASLVI 84
>S35B1_CHICK (Q8AWB6) Solute carrier family 35 member B1 (Endoplasmic reticulum| nucleotide sugar transporter 1) Length = 325 Score = 35.4 bits (80), Expect = 0.075 Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Frame = +1 Query: 172 AGRDKDERRRLMGRCALAVVGIMSTLLVYGVLQEKLMRVPY--GAEKEFFRYSLFLVF 339 AGR RL R + +G+ + YG+LQE + R Y GA +E F ++L LVF Sbjct: 5 AGRRSRSPERL--RLPVCFLGVFACYFYYGILQESITRGKYGDGARQEKFTFALSLVF 60
>S35B1_RAT (Q6V7K3) Solute carrier family 35 member B1 (UDP-galactose| transporter-related protein 1) (UGTrel1) Length = 322 Score = 34.3 bits (77), Expect = 0.17 Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%) Frame = +1 Query: 211 RCALAVVGIMSTLLVYGVLQEKLMRVPY--GAEKEFFRYSLFLVF 339 R L +G+ YG+LQEK+ R Y G ++E F ++L LVF Sbjct: 13 RLPLCFLGVFVCYFYYGILQEKITRGKYGEGPKQETFTFALTLVF 57
>S35B1_MOUSE (P97858) Solute carrier family 35 member B1 (UDP-galactose| transporter-related protein 1) (UGTrel1) (UDP-galactose translocator 2) Length = 322 Score = 34.3 bits (77), Expect = 0.17 Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%) Frame = +1 Query: 211 RCALAVVGIMSTLLVYGVLQEKLMRVPY--GAEKEFFRYSLFLVF 339 R L +G+ YG+LQEK+ R Y G ++E F ++L LVF Sbjct: 13 RLPLCFLGVFVCYFYYGILQEKITRGKYGEGPKQETFTFALTLVF 57
>HUT1_CANAL (Q5ADN8) UDP-galactose transporter homolog 1| Length = 370 Score = 34.3 bits (77), Expect = 0.17 Identities = 15/54 (27%), Positives = 31/54 (57%) Frame = +1 Query: 172 AGRDKDERRRLMGRCALAVVGIMSTLLVYGVLQEKLMRVPYGAEKEFFRYSLFL 333 +G++K++ L+ + V G+ T L + +LQE++ PYG E+F+ + + Sbjct: 15 SGQEKNKALTLI----ICVCGLYGTFLTWSILQERINTKPYGDNNEYFKAPIII 64
>S35B1_BRARE (Q66HX0) Solute carrier family 35 member B1| Length = 329 Score = 33.9 bits (76), Expect = 0.22 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 2/45 (4%) Frame = +1 Query: 211 RCALAVVGIMSTLLVYGVLQEKLMRVPY--GAEKEFFRYSLFLVF 339 R A+ G+ YG+LQE + R Y +KE FRY+ LVF Sbjct: 19 RFAVCFCGVFVCYFYYGILQETITRADYTHAGKKEKFRYATTLVF 63
>S35B2_PONPY (Q5R9A1) Adenosine 3'-phospho 5'-phosphosulfate transporter 1 (PAPS| transporter 1) (Solute carrier family 35 member B2) Length = 432 Score = 33.1 bits (74), Expect = 0.37 Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 4/77 (5%) Frame = +1 Query: 133 PRAMADEPALPVAAGRDKDERRRLMGRCALAVVGIMSTLLVYGVLQEKLMRVPYGAEK-- 306 P+A + P P + + + + G+ + L +GVLQE++M YGA Sbjct: 86 PKASDEVPLAPRTEAAETTPMWQAL-KLLFCATGLQVSYLTWGVLQERVMTRSYGATATS 144 Query: 307 --EFFRYSLFLVFCNRI 351 E F S FLV NR+ Sbjct: 145 PGERFTDSQFLVLMNRV 161
>S35B2_HUMAN (Q8TB61) Adenosine 3'-phospho 5'-phosphosulfate transporter 1 (PAPS| transporter 1) (Solute carrier family 35 member B2) (Putative MAPK-activating protein PM15) (Putative NF-kappa-B-activating protein 48) Length = 432 Score = 33.1 bits (74), Expect = 0.37 Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 4/77 (5%) Frame = +1 Query: 133 PRAMADEPALPVAAGRDKDERRRLMGRCALAVVGIMSTLLVYGVLQEKLMRVPYGAEK-- 306 P+A + P P + + + + G+ + L +GVLQE++M YGA Sbjct: 86 PKASDEVPLAPRTEAAETTPMWQAL-KLLFCATGLQVSYLTWGVLQERVMTRSYGATATS 144 Query: 307 --EFFRYSLFLVFCNRI 351 E F S FLV NR+ Sbjct: 145 PGERFTDSQFLVLMNRV 161
>S35B1_XENTR (Q8AXS6) Solute carrier family 35 member B1| Length = 323 Score = 32.7 bits (73), Expect = 0.49 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%) Frame = +1 Query: 211 RCALAVVGIMSTLLVYGVLQEKLMRVPY--GAEKEFFRYSLFLVF 339 R + +G+ YG+LQE + R Y G ++E FR++L LVF Sbjct: 13 RLLVCFLGVFVCYFYYGILQETITRGTYGEGEKQEKFRFALSLVF 57
>S35B1_XENLA (Q6GQ70) Solute carrier family 35 member B1 (Endoplasmic reticulum| nucleotide sugar transporter 1) Length = 320 Score = 32.7 bits (73), Expect = 0.49 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%) Frame = +1 Query: 211 RCALAVVGIMSTLLVYGVLQEKLMRVPY--GAEKEFFRYSLFLVF 339 R + +G+ YG+LQE + R Y G ++E FR++L LVF Sbjct: 11 RLLVCFLGVFVCYFYYGILQETITRRTYGEGEKQEKFRFALSLVF 55
>S35B2_MOUSE (Q91ZN5) Adenosine 3'-phospho 5'-phosphosulfate transporter 1 (PAPS| transporter 1) (Solute carrier family 35 member B2) Length = 431 Score = 32.7 bits (73), Expect = 0.49 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 4/44 (9%) Frame = +1 Query: 232 GIMSTLLVYGVLQEKLMRVPYGAEK----EFFRYSLFLVFCNRI 351 G+ + L +G+LQE++M YGA E F S FLV NR+ Sbjct: 118 GLQVSYLTWGILQERVMTGSYGATATSPGEHFTDSQFLVLMNRV 161
>S35B1_DROME (Q9VDD7) Solute carrier family 35 member B1 homolog| Length = 338 Score = 32.7 bits (73), Expect = 0.49 Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 11/58 (18%) Frame = +1 Query: 211 RCALAVVGIMSTLLVYGVLQEKLMRVPYGAE-------KEFFRYSLFLVF----CNRI 351 R + VGI +YG++QEKL R YG E E F Y+L LV+ CN + Sbjct: 8 RFVIYAVGIFVCYFLYGIVQEKLTRGRYGEEVQTDGSVGERFTYALALVWVQCLCNYV 65
>S35B2_CAEEL (Q8MXJ9) Adenosine 3'-phospho 5'-phosphosulfate transporter 1 (PAPS| transporter 1) Length = 425 Score = 32.7 bits (73), Expect = 0.49 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 5/45 (11%) Frame = +1 Query: 232 GIMSTLLVYGVLQEKLMRVPYGAEKEF-----FRYSLFLVFCNRI 351 GI TL+ GVLQE+++ Y + F + FL+FCNRI Sbjct: 112 GIQVTLVAMGVLQERIITRGYRRSDQLEVEDKFGETQFLIFCNRI 156
>SUVR1_ARATH (Q946J2) Histone-lysine N-methyltransferase SUVR1 (EC 2.1.1.43)| (Suppressor of variegation 3-9-related protein 1) (Su(var)3-9-related protein 1) (Protein SET DOMAIN GROUP 13) Length = 630 Score = 29.6 bits (65), Expect = 4.1 Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 4/78 (5%) Frame = +1 Query: 127 IYPRAMADEPALPVAAGRDKDERRRLMGRCALAVVGI----MSTLLVYGVLQEKLMRVPY 294 +Y R+ D+P LPV RL G AL + G+ +S L + L L+ +P Sbjct: 502 LYQRSFEDKPTLPVILDAHWGSEERLEGDKALCLDGMFYGNISRFLNHRCLDANLIEIPV 561 Query: 295 GAEKEFFRYSLFLVFCNR 348 E Y F R Sbjct: 562 QVETPDQHYYHLAFFTTR 579
>VID21_CRYNE (Q5KL22) Chromatin modification-related protein VID21| Length = 985 Score = 29.3 bits (64), Expect = 5.4 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = +1 Query: 61 VQAPVAVNRSPEQASQG*GPSPIYPRAMADEPALPVAA-GRDKDERRRLMGR 213 V +P A +R+P+ ++G GPS I P PA+ AA G + MGR Sbjct: 794 VSSPFAQSRTPDLPAEGAGPSGINP---TPSPAMQAAAIGAQSSPQIATMGR 842
>HUT1_DEBHA (Q6BMV3) UDP-galactose transporter homolog 1| Length = 354 Score = 29.3 bits (64), Expect = 5.4 Identities = 13/42 (30%), Positives = 24/42 (57%) Frame = +1 Query: 184 KDERRRLMGRCALAVVGIMSTLLVYGVLQEKLMRVPYGAEKE 309 K E L+ A ++G+ ++ L + VLQE++ PYG+ + Sbjct: 2 KKEGGGLIITLAACILGLYASFLTWSVLQERISTKPYGSNPD 43
>GPMI_GRATL (Q6B8L5) 2,3-bisphosphoglycerate-independent phosphoglycerate| mutase (EC 5.4.2.1) (Phosphoglyceromutase) (BPG-independent PGAM) (iPGM) Length = 510 Score = 28.9 bits (63), Expect = 7.1 Identities = 11/34 (32%), Positives = 19/34 (55%) Frame = -2 Query: 464 KLWLVC*EGDNTVFLDGATGSVDFLLDSNTSADT 363 K+WL C ++T+ + G+ D++LD N T Sbjct: 416 KIWLACQAMNSTLIITSDHGNADYMLDENNEPCT 449
>IF2_PSEPK (Q88DV7) Translation initiation factor IF-2| Length = 846 Score = 28.5 bits (62), Expect = 9.2 Identities = 18/45 (40%), Positives = 21/45 (46%) Frame = +1 Query: 67 APVAVNRSPEQASQG*GPSPIYPRAMADEPALPVAAGRDKDERRR 201 AP A A+ P+P+ A A E A AA R KDE RR Sbjct: 147 APAAKPEPAPAAAPVAAPAPVVADAPASEDAAARAAERKKDETRR 191
>HUT1_EMENI (Q5B5W2) UDP-galactose transporter homolog 1| Length = 424 Score = 28.5 bits (62), Expect = 9.2 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 10/49 (20%) Frame = +1 Query: 217 ALAVVGIMSTLLVYGVLQEKLMRVPYGA----------EKEFFRYSLFL 333 A V GI ++ L +GVLQE + V Y EKE F +S+ L Sbjct: 61 AFCVAGIYASFLSWGVLQEAITTVSYPVHPPTAAEPEPEKERFTFSIVL 109 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,853,133 Number of Sequences: 219361 Number of extensions: 678915 Number of successful extensions: 1762 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 1748 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1760 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
