>AGI_URTDI (P11218) Lectin/endochitinase precursor (EC 3.2.1.14) (Agglutinin)|
           (UDA)
          Length = 372

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 15/32 (46%), Positives = 17/32 (53%)
 Frame = -2

Query: 297 CAAAGSSPRPCAPSWCCSVRCPRRCLWCGGGS 202
           C AA  +P PC    CCSV       WCGGG+
Sbjct: 72  CGAAVGNP-PCGQDRCCSVHG-----WCGGGN 97

>KR102_HUMAN (P60368) Keratin-associated protein 10-2 (Keratin-associated|
           protein 10.2) (High sulfur keratin-associated protein
           10.2) (Keratin-associated protein 18-2)
           (Keratin-associated protein 18.2)
          Length = 255

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 7/56 (12%)
 Frame = -2

Query: 300 SCAAAGSSPRPCAPSWCCSVRCPRRCL-------WCGGGSRPPPRHLRGRPASCSS 154
           SC  A  +  PC  S C SV C   C         C G S P  +    +PA C+S
Sbjct: 167 SCQPACCTSSPCQQSCCVSVCCKPVCCKSICCVPVCSGASSPCCQQSSCQPACCTS 222

>KRUC_SHEEP (P26372) Keratin, ultra high-sulfur matrix protein (UHS keratin)|
          Length = 182

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 22/61 (36%), Positives = 23/61 (37%), Gaps = 7/61 (11%)
 Frame = -2

Query: 300 SCAAAGSSPRPCAPSWCCSVRCPRRCLWCG-------GGSRPPPRHLRGRPASCSS*VGC 142
           SC   GSS   C P  CC   C   C  CG       GGS+       G    C S  GC
Sbjct: 78  SCGGCGSSC--CKPVCCCVPACS--CSSCGKGGCGSCGGSKGGCGSCGGSKGGCGSCGGC 133

Query: 141 G 139
           G
Sbjct: 134 G 134

>KRA59_HUMAN (P26371) Keratin-associated protein 5-9 (Keratin-associated protein|
           5.9) (Ultrahigh sulfur keratin-associated protein 5.9)
           (Keratin, cuticle, ultrahigh sulfur 1) (Keratin, ultra
           high-sulfur matrix protein A) (UHS keratin A) (UHS KerA)
          Length = 169

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 25/76 (32%), Positives = 28/76 (36%), Gaps = 22/76 (28%)
 Frame = -2

Query: 300 SCAAAGSSPRPCAPSWCCSVRC-----------------PRRCLWCGG-----GSRPPPR 187
           SC + GS  R C PS C  V C                  R C  CGG     GS    +
Sbjct: 20  SCGSCGSGCRGCGPSCCAPVYCCKPVCCCVPACSCSSCGKRGCGSCGGSKGGCGSCGCSQ 79

Query: 186 HLRGRPASCSS*VGCG 139
               +P  CSS  GCG
Sbjct: 80  CSCCKPCCCSS--GCG 93

>NICE1_HUMAN (Q9UGL9) Protein NICE-1|
          Length = 99

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 24/67 (35%), Positives = 27/67 (40%), Gaps = 14/67 (20%)
 Frame = -2

Query: 300 SCAAAGSSPRPCAPSWCC---SVRC---PRR--------CLWCGGGSRPPPRHLRGRPAS 163
           S +  GS    C  S CC   S  C   PRR        C  CGGGS+   R    R + 
Sbjct: 36  SSSCCGSGRGCCGDSGCCGSSSTSCCCFPRRRRRQRSSGCCCCGGGSQRSQRS-NNRSSG 94

Query: 162 CSS*VGC 142
           C S  GC
Sbjct: 95  CCS--GC 99

>EAP2_EUCUL (P83597) Antifungal peptide 2 (EAFP2)|
          Length = 41

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
 Frame = -2

Query: 288 AGSSPRPCAPSWCCSV--RCPRRCLWCGGGS 202
           A   PRPC    CCS+   C     +CG G+
Sbjct: 4   ASRCPRPCNAGLCCSIYGYCGSGAAYCGAGN 34

>SLAP_BACCI (P35824) S-layer-related protein precursor|
          Length = 1616

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
 Frame = -2

Query: 303  LSCAAAGSSPRPCAPSWCCSVRCPRRCLWCGGGSRPP----PRHLRGRPA 166
            L C  AG+   P       ++R   RC + GGGSRP      R LR RPA
Sbjct: 1562 LRCRCAGALRGPGR-----NLRLGGRCRFAGGGSRPAGRTRGRTLRARPA 1606

>YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon Tn4556|
          Length = 348

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 16/72 (22%)
 Frame = -2

Query: 294 AAAGSSPRPCAPSWCCSVRCPRRCLWCG------------GGSRPPPRHLRGRP----AS 163
           A++ SSP+  AP+   + R PRR                   +RPPPR   G P    A 
Sbjct: 239 ASSASSPQAAAPAAPSATRLPRRTTPSAPRPSSRPARPPIPAARPPPRRTPGTPRPAAAR 298

Query: 162 CSS*VGCGEWRR 127
             +  GC   RR
Sbjct: 299 ARAPAGCSPARR 310


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,738,037
Number of Sequences: 219361
Number of extensions: 992999
Number of successful extensions: 3319
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3310
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3362826254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)