>KCNA5_HUMAN (P22460) Potassium voltage-gated channel subfamily A member 5|
           (Voltage-gated potassium channel subunit Kv1.5) (HK2)
           (HPCN1)
          Length = 613

 Score = 31.6 bits (70), Expect = 0.61
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = +1

Query: 4   SALRPPPQETEAGIRPRTPMDSKLQTPLLPPP 99
           S +RP P   + G+RP  P+  +L  P  PPP
Sbjct: 62  SGVRPLPPLPDPGVRPLPPLPEELPRPRRPPP 93

>MDC1_HUMAN (Q14676) Mediator of DNA damage checkpoint protein 1 (Nuclear factor|
            with BRCT domains 1)
          Length = 2089

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 19   PPQETEAGIRPRTPMDSKLQTPLLPPP 99
            PP   EA   P+ P++S+ Q  L PPP
Sbjct: 1039 PPTVPEAPAPPQKPLNSQSQKHLAPPP 1065

>MDC1_PANTR (Q7YR40) Mediator of DNA damage checkpoint protein 1|
          Length = 2171

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 19   PPQETEAGIRPRTPMDSKLQTPLLPPP 99
            PP   EA   P+ P++S+ Q  L PPP
Sbjct: 1039 PPTVPEAPAPPQKPLNSQSQKHLAPPP 1065

>CTF1A_FUSSO (P52958) Cutinase transcription factor 1 alpha|
          Length = 909

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 16  PPPQETEAGIRPRTPMDSKLQTPLLPPP 99
           P PQE+    RP+TP   K +T  + PP
Sbjct: 693 PQPQESYERSRPQTPSAVKAETSSMQPP 720

>AB1IP_MOUSE (Q8R5A3) Amyloid beta A4 precursor protein-binding family B member|
           1-interacting protein (APBB1-interacting protein 1)
           (Proline-rich EVH1 ligand 1) (PREL-1) (Proline-rich
           protein 48)
          Length = 670

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = +1

Query: 16  PPPQETEAGIRPRTPMDSKLQTP--LLPPP 99
           PPP+E  +G+ P  P    L+ P   +PPP
Sbjct: 566 PPPEEDNSGLLPPPPPPPYLEEPPDFVPPP 595


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.310    0.133    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,288,574
Number of Sequences: 219361
Number of extensions: 167224
Number of successful extensions: 600
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 80,573,946
effective HSP length: 32
effective length of database: 73,554,394
effective search space used: 1765305456
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)