ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast01f05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_463790.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1240 Score = 75.8 bits (38), Expect = 5e-11 Identities = 68/78 (87%) Strand = Plus / Plus Query: 37 cgccgatgctccacaagaacctccgcgcgctcggccccggcctcaatccgttcgccccct 96 |||||||||||| |||||| |||||||||||||| || ||| | ||||| || || |||| Sbjct: 202 cgccgatgctccccaagaagctccgcgcgctcggtccaggcttgaatccctttgctccct 261 Query: 97 tcggcatgggcaactact 114 |||||||||| ||||||| Sbjct: 262 tcggcatgggtaactact 279
>ref|XM_506672.1| PREDICTED Oryza sativa (japonica cultivar-group), B1370C05.31 mRNA Length = 1261 Score = 75.8 bits (38), Expect = 5e-11 Identities = 68/78 (87%) Strand = Plus / Plus Query: 37 cgccgatgctccacaagaacctccgcgcgctcggccccggcctcaatccgttcgccccct 96 |||||||||||| |||||| |||||||||||||| || ||| | ||||| || || |||| Sbjct: 210 cgccgatgctccccaagaagctccgcgcgctcggtccaggcttgaatccctttgctccct 269 Query: 97 tcggcatgggcaactact 114 |||||||||| ||||||| Sbjct: 270 tcggcatgggtaactact 287
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 75.8 bits (38), Expect = 5e-11 Identities = 68/78 (87%) Strand = Plus / Plus Query: 37 cgccgatgctccacaagaacctccgcgcgctcggccccggcctcaatccgttcgccccct 96 |||||||||||| |||||| |||||||||||||| || ||| | ||||| || || |||| Sbjct: 133193 cgccgatgctccccaagaagctccgcgcgctcggtccaggcttgaatccctttgctccct 133252 Query: 97 tcggcatgggcaactact 114 |||||||||| ||||||| Sbjct: 133253 tcggcatgggtaactact 133270 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 cgtcctcctcctcgtcgtcgcc 40 |||||||||||||||||||||| Sbjct: 6260682 cgtcctcctcctcgtcgtcgcc 6260661 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 ctcctcctcgtcgtcgccgat 43 ||||||||||||||||||||| Sbjct: 33824503 ctcctcctcgtcgtcgccgat 33824483 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 ccgccgcccgtcctcctcctc 31 ||||||||||||||||||||| Sbjct: 30596451 ccgccgcccgtcctcctcctc 30596471 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 tcctcctcctcgtcgtcgccg 41 ||||||||||||||||||||| Sbjct: 18845134 tcctcctcctcgtcgtcgccg 18845114 Score = 42.1 bits (21), Expect = 0.70 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 9 cgccgccgcccgtcctcctcctcgtcgtc 37 ||||||||||| ||||||||||||||||| Sbjct: 10758136 cgccgccgccc-tcctcctcctcgtcgtc 10758163 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 tcctcctcctcgtcgtcgccg 41 ||||||||||||||||||||| Sbjct: 10270744 tcctcctcctcgtcgtcgccg 10270724
>dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1370C05 Length = 148271 Score = 75.8 bits (38), Expect = 5e-11 Identities = 68/78 (87%) Strand = Plus / Plus Query: 37 cgccgatgctccacaagaacctccgcgcgctcggccccggcctcaatccgttcgccccct 96 |||||||||||| |||||| |||||||||||||| || ||| | ||||| || || |||| Sbjct: 127802 cgccgatgctccccaagaagctccgcgcgctcggtccaggcttgaatccctttgctccct 127861 Query: 97 tcggcatgggcaactact 114 |||||||||| ||||||| Sbjct: 127862 tcggcatgggtaactact 127879
>dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1435_F07 Length = 139041 Score = 75.8 bits (38), Expect = 5e-11 Identities = 68/78 (87%) Strand = Plus / Plus Query: 37 cgccgatgctccacaagaacctccgcgcgctcggccccggcctcaatccgttcgccccct 96 |||||||||||| |||||| |||||||||||||| || ||| | ||||| || || |||| Sbjct: 82220 cgccgatgctccccaagaagctccgcgcgctcggtccaggcttgaatccctttgctccct 82279 Query: 97 tcggcatgggcaactact 114 |||||||||| ||||||| Sbjct: 82280 tcggcatgggtaactact 82297
>dbj|AK103103.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118O11, full insert sequence Length = 1261 Score = 75.8 bits (38), Expect = 5e-11 Identities = 68/78 (87%) Strand = Plus / Plus Query: 37 cgccgatgctccacaagaacctccgcgcgctcggccccggcctcaatccgttcgccccct 96 |||||||||||| |||||| |||||||||||||| || ||| | ||||| || || |||| Sbjct: 210 cgccgatgctccccaagaagctccgcgcgctcggtccaggcttgaatccctttgctccct 269 Query: 97 tcggcatgggcaactact 114 |||||||||| ||||||| Sbjct: 270 tcggcatgggtaactact 287
>dbj|AK060523.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-E05, full insert sequence Length = 1240 Score = 75.8 bits (38), Expect = 5e-11 Identities = 68/78 (87%) Strand = Plus / Plus Query: 37 cgccgatgctccacaagaacctccgcgcgctcggccccggcctcaatccgttcgccccct 96 |||||||||||| |||||| |||||||||||||| || ||| | ||||| || || |||| Sbjct: 202 cgccgatgctccccaagaagctccgcgcgctcggtccaggcttgaatccctttgctccct 261 Query: 97 tcggcatgggcaactact 114 |||||||||| ||||||| Sbjct: 262 tcggcatgggtaactact 279
>gb|AC139569.3| Mus musculus BAC clone RP24-340F13 from chromosome 14, complete sequence Length = 173736 Score = 54.0 bits (27), Expect = 2e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 175 tttcttccccctccccttctccttctt 201 ||||||||||||||||||||||||||| Sbjct: 129079 tttcttccccctccccttctccttctt 129053
>gb|AC162183.4| Mus musculus BAC clone RP23-27I10 from chromosome 14, complete sequence Length = 225212 Score = 54.0 bits (27), Expect = 2e-04 Identities = 27/27 (100%) Strand = Plus / Minus Query: 175 tttcttccccctccccttctccttctt 201 ||||||||||||||||||||||||||| Sbjct: 11902 tttcttccccctccccttctccttctt 11876
>gb|AY855162.1| Macaca mulatta RPGR mRNA, partial cds Length = 1684 Score = 50.1 bits (25), Expect = 0.003 Identities = 25/25 (100%) Strand = Plus / Minus Query: 177 tcttccccctccccttctccttctt 201 ||||||||||||||||||||||||| Sbjct: 1151 tcttccccctccccttctccttctt 1127 Score = 48.1 bits (24), Expect = 0.011 Identities = 24/24 (100%) Strand = Plus / Minus Query: 176 ttcttccccctccccttctccttc 199 |||||||||||||||||||||||| Sbjct: 987 ttcttccccctccccttctccttc 964 Score = 42.1 bits (21), Expect = 0.70 Identities = 24/25 (96%) Strand = Plus / Minus Query: 177 tcttccccctccccttctccttctt 201 |||||||||||| |||||||||||| Sbjct: 848 tcttccccctcctcttctccttctt 824 Score = 42.1 bits (21), Expect = 0.70 Identities = 24/25 (96%) Strand = Plus / Minus Query: 177 tcttccccctccccttctccttctt 201 |||||| |||||||||||||||||| Sbjct: 794 tcttcctcctccccttctccttctt 770
>gb|AC147216.3| Pan troglodytes BAC clone RP43-156I12 from 7, complete sequence Length = 199965 Score = 48.1 bits (24), Expect = 0.011 Identities = 24/24 (100%) Strand = Plus / Minus Query: 178 cttccccctccccttctccttctt 201 |||||||||||||||||||||||| Sbjct: 190121 cttccccctccccttctccttctt 190098
>gb|AY855167.1| Sus scrofa RPGR mRNA, partial cds Length = 1737 Score = 48.1 bits (24), Expect = 0.011 Identities = 24/24 (100%) Strand = Plus / Minus Query: 178 cttccccctccccttctccttctt 201 |||||||||||||||||||||||| Sbjct: 1306 cttccccctccccttctccttctt 1283
>gb|AC158142.19| Mus musculus chromosome 15, clone RP24-342H15, complete sequence Length = 195319 Score = 48.1 bits (24), Expect = 0.011 Identities = 24/24 (100%) Strand = Plus / Plus Query: 176 ttcttccccctccccttctccttc 199 |||||||||||||||||||||||| Sbjct: 86037 ttcttccccctccccttctccttc 86060
>ref|NM_001034853.1| Homo sapiens retinitis pigmentosa GTPase regulator (RPGR), transcript variant C, mRNA Length = 4718 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Minus Query: 177 tcttccccctccccttctccttc 199 ||||||||||||||||||||||| Sbjct: 3143 tcttccccctccccttctccttc 3121 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Minus Query: 177 tcttccccctccccttctccttc 199 ||||||||||||||||||||||| Sbjct: 3116 tcttccccctccccttctccttc 3094 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Minus Query: 177 tcttccccctccccttctccttc 199 ||||||||||||||||||||||| Sbjct: 3071 tcttccccctccccttctccttc 3049 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Minus Query: 177 tcttccccctccccttctccttc 199 ||||||||||||||||||||||| Sbjct: 2969 tcttccccctccccttctccttc 2947 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Minus Query: 177 tcttccccctccccttctccttc 199 ||||||||||||||||||||||| Sbjct: 2807 tcttccccctccccttctccttc 2785 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 tcttccccctccccttctcc 196 |||||||||||||||||||| Sbjct: 3017 tcttccccctccccttctcc 2998
>gb|AC164098.4| Mus musculus BAC clone RP23-341D24 from chromosome 1, complete sequence Length = 221754 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Minus Query: 176 ttcttccccctccccttctcctt 198 ||||||||||||||||||||||| Sbjct: 21437 ttcttccccctccccttctcctt 21415
>gb|AC125403.4| Mus musculus BAC clone RP23-4E15 from 1, complete sequence Length = 126790 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Minus Query: 176 ttcttccccctccccttctcctt 198 ||||||||||||||||||||||| Sbjct: 114231 ttcttccccctccccttctcctt 114209
>emb|AL606748.9| Human DNA sequence from clone RP13-43E11 on chromosome Xp21.1-21.3 Contains the 5' end of the SRPX gene for a chromosome X sushi-repeat-containing protein, a novel gene, the RPGR gene for retinitis pigmentosa GTPase regulator, the 5' end of the OTC gene for ornithine carbamoyltransferase and two CpG islands, complete sequence Length = 141577 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Plus Query: 177 tcttccccctccccttctccttc 199 ||||||||||||||||||||||| Sbjct: 73700 tcttccccctccccttctccttc 73722 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Plus Query: 177 tcttccccctccccttctccttc 199 ||||||||||||||||||||||| Sbjct: 73538 tcttccccctccccttctccttc 73560 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Plus Query: 177 tcttccccctccccttctccttc 199 ||||||||||||||||||||||| Sbjct: 73436 tcttccccctccccttctccttc 73458 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Plus Query: 177 tcttccccctccccttctccttc 199 ||||||||||||||||||||||| Sbjct: 73391 tcttccccctccccttctccttc 73413 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Plus Query: 177 tcttccccctccccttctccttc 199 ||||||||||||||||||||||| Sbjct: 73364 tcttccccctccccttctccttc 73386 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 tcttccccctccccttctcc 196 |||||||||||||||||||| Sbjct: 73490 tcttccccctccccttctcc 73509
>emb|AJ318463.1|HSA318463 Homo sapiens RPGR gene for retinitis pigmentosa GTPase regulator, exons 1-19 Length = 77581 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Minus Query: 177 tcttccccctccccttctccttc 199 ||||||||||||||||||||||| Sbjct: 48211 tcttccccctccccttctccttc 48189 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Minus Query: 177 tcttccccctccccttctccttc 199 ||||||||||||||||||||||| Sbjct: 48184 tcttccccctccccttctccttc 48162 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Minus Query: 177 tcttccccctccccttctccttc 199 ||||||||||||||||||||||| Sbjct: 48139 tcttccccctccccttctccttc 48117 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Minus Query: 177 tcttccccctccccttctccttc 199 ||||||||||||||||||||||| Sbjct: 48037 tcttccccctccccttctccttc 48015 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Minus Query: 177 tcttccccctccccttctccttc 199 ||||||||||||||||||||||| Sbjct: 47875 tcttccccctccccttctccttc 47853 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 tcttccccctccccttctcc 196 |||||||||||||||||||| Sbjct: 48085 tcttccccctccccttctcc 48066
>tpg|BK005711.1| TPA: TPA_exp: Homo sapiens RPGR ORF15 isoform mRNA, complete cds, alternatively spliced Length = 4606 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Minus Query: 177 tcttccccctccccttctccttc 199 ||||||||||||||||||||||| Sbjct: 3034 tcttccccctccccttctccttc 3012 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Minus Query: 177 tcttccccctccccttctccttc 199 ||||||||||||||||||||||| Sbjct: 3007 tcttccccctccccttctccttc 2985 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Minus Query: 177 tcttccccctccccttctccttc 199 ||||||||||||||||||||||| Sbjct: 2962 tcttccccctccccttctccttc 2940 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Minus Query: 177 tcttccccctccccttctccttc 199 ||||||||||||||||||||||| Sbjct: 2860 tcttccccctccccttctccttc 2838 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Minus Query: 177 tcttccccctccccttctccttc 199 ||||||||||||||||||||||| Sbjct: 2698 tcttccccctccccttctccttc 2676 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 tcttccccctccccttctcc 196 |||||||||||||||||||| Sbjct: 2908 tcttccccctccccttctcc 2889
>gb|AF286472.1|AF286471S2 Homo sapiens retinitis pigmentosa GTPase regulator (RPGR) gene, exon ORF15 partial cds Length = 2834 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Minus Query: 177 tcttccccctccccttctccttc 199 ||||||||||||||||||||||| Sbjct: 1222 tcttccccctccccttctccttc 1200 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Minus Query: 177 tcttccccctccccttctccttc 199 ||||||||||||||||||||||| Sbjct: 1195 tcttccccctccccttctccttc 1173 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Minus Query: 177 tcttccccctccccttctccttc 199 ||||||||||||||||||||||| Sbjct: 1150 tcttccccctccccttctccttc 1128 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Minus Query: 177 tcttccccctccccttctccttc 199 ||||||||||||||||||||||| Sbjct: 1048 tcttccccctccccttctccttc 1026 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Minus Query: 177 tcttccccctccccttctccttc 199 ||||||||||||||||||||||| Sbjct: 886 tcttccccctccccttctccttc 864 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 tcttccccctccccttctcc 196 |||||||||||||||||||| Sbjct: 1096 tcttccccctccccttctcc 1077
>gb|AY855163.1| Gorilla gorilla RPGR mRNA, partial cds Length = 1650 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Minus Query: 177 tcttccccctccccttctccttc 199 ||||||||||||||||||||||| Sbjct: 1169 tcttccccctccccttctccttc 1147 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Minus Query: 177 tcttccccctccccttctccttc 199 ||||||||||||||||||||||| Sbjct: 1142 tcttccccctccccttctccttc 1120 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Minus Query: 177 tcttccccctccccttctccttc 199 ||||||||||||||||||||||| Sbjct: 1076 tcttccccctccccttctccttc 1054 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Minus Query: 177 tcttccccctccccttctccttc 199 ||||||||||||||||||||||| Sbjct: 974 tcttccccctccccttctccttc 952 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Minus Query: 177 tcttccccctccccttctcctt 198 |||||||||||||||||||||| Sbjct: 791 tcttccccctccccttctcctt 770 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 177 tcttccccctccccttctcc 196 |||||||||||||||||||| Sbjct: 1022 tcttccccctccccttctcc 1003
>gb|AC133166.2| Mus musculus BAC clone RP24-186D13 from 1, complete sequence Length = 158206 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Minus Query: 176 ttcttccccctccccttctcctt 198 ||||||||||||||||||||||| Sbjct: 97157 ttcttccccctccccttctcctt 97135
>emb|AL645530.11| Mouse DNA sequence from clone RP23-92N10 on chromosome 11, complete sequence Length = 91481 Score = 46.1 bits (23), Expect = 0.045 Identities = 23/23 (100%) Strand = Plus / Minus Query: 175 tttcttccccctccccttctcct 197 ||||||||||||||||||||||| Sbjct: 45810 tttcttccccctccccttctcct 45788
>ref|XM_464603.1| Oryza sativa (japonica cultivar-group), mRNA Length = 279 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Plus Query: 19 cgtcctcctcctcgtcgtcgcc 40 |||||||||||||||||||||| Sbjct: 42 cgtcctcctcctcgtcgtcgcc 63
>gb|AC108433.9| Mus musculus chromosome 18, clone RP23-194M19, complete sequence Length = 188997 Score = 44.1 bits (22), Expect = 0.18 Identities = 25/26 (96%) Strand = Plus / Plus Query: 176 ttcttccccctccccttctccttctt 201 |||||||||||||||||| ||||||| Sbjct: 147027 ttcttccccctccccttccccttctt 147052
>ref|XM_613451.2| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 1 (LOC533892), mRNA Length = 946 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Minus Query: 20 gtcctcctcctcgtcgtcgccg 41 |||||||||||||||||||||| Sbjct: 874 gtcctcctcctcgtcgtcgccg 853
>ref|XM_872766.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 9 (LOC533892), mRNA Length = 766 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Minus Query: 20 gtcctcctcctcgtcgtcgccg 41 |||||||||||||||||||||| Sbjct: 694 gtcctcctcctcgtcgtcgccg 673
>ref|XM_864261.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 3 (LOC533892), mRNA Length = 738 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Minus Query: 20 gtcctcctcctcgtcgtcgccg 41 |||||||||||||||||||||| Sbjct: 666 gtcctcctcctcgtcgtcgccg 645
>ref|XM_872555.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 8 (LOC533892), mRNA Length = 910 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Minus Query: 20 gtcctcctcctcgtcgtcgccg 41 |||||||||||||||||||||| Sbjct: 838 gtcctcctcctcgtcgtcgccg 817
>ref|XM_872464.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 7 (LOC533892), mRNA Length = 740 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Minus Query: 20 gtcctcctcctcgtcgtcgccg 41 |||||||||||||||||||||| Sbjct: 668 gtcctcctcctcgtcgtcgccg 647
>ref|XM_872253.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 5 (LOC533892), mRNA Length = 551 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Minus Query: 20 gtcctcctcctcgtcgtcgccg 41 |||||||||||||||||||||| Sbjct: 479 gtcctcctcctcgtcgtcgccg 458
>ref|XM_872145.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S9, transcript variant 4 (LOC533892), mRNA Length = 1356 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Minus Query: 20 gtcctcctcctcgtcgtcgccg 41 |||||||||||||||||||||| Sbjct: 1284 gtcctcctcctcgtcgtcgccg 1263
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Minus Query: 12 cgccgcccgtcctcctcctcgt 33 |||||||||||||||||||||| Sbjct: 2359793 cgccgcccgtcctcctcctcgt 2359772
>gb|AC164954.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940128D9, complete sequence Length = 128585 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Minus Query: 96 ttcggcatgggcaactactccc 117 |||||||||||||||||||||| Sbjct: 27322 ttcggcatgggcaactactccc 27301
>gb|AC115037.16| Mus musculus chromosome 12, clone RP24-276C17, complete sequence Length = 214848 Score = 44.1 bits (22), Expect = 0.18 Identities = 25/26 (96%) Strand = Plus / Plus Query: 176 ttcttccccctccccttctccttctt 201 ||||||||| |||||||||||||||| Sbjct: 194760 ttcttccccttccccttctccttctt 194785
>gb|AC145474.2| Rattus norvegicus chromosome 1 clone RP32-113N8 map q32, complete sequence Length = 137003 Score = 44.1 bits (22), Expect = 0.18 Identities = 25/26 (96%) Strand = Plus / Plus Query: 175 tttcttccccctccccttctccttct 200 |||||||||| ||||||||||||||| Sbjct: 110091 tttcttccccttccccttctccttct 110116
>gb|AC129080.6| Mus musculus BAC clone RP24-226L20 from chromosome 5, complete sequence Length = 156781 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Plus Query: 180 tccccctccccttctccttctt 201 |||||||||||||||||||||| Sbjct: 29569 tccccctccccttctccttctt 29590
>gb|AC117240.4| Mus musculus BAC clone RP24-140F3 from 12, complete sequence Length = 171990 Score = 44.1 bits (22), Expect = 0.18 Identities = 25/26 (96%) Strand = Plus / Minus Query: 176 ttcttccccctccccttctccttctt 201 ||||||||| |||||||||||||||| Sbjct: 116474 ttcttccccttccccttctccttctt 116449
>gb|AC074390.6| Homo sapiens BAC clone RP11-515K14 from 7, complete sequence Length = 111722 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Minus Query: 180 tccccctccccttctccttctt 201 |||||||||||||||||||||| Sbjct: 83562 tccccctccccttctccttctt 83541
>emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete genome; segment 1/29 Length = 299050 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 cgtcctcctcctcgtcgtcgcc 40 |||||||||||||||||||||| Sbjct: 237799 cgtcctcctcctcgtcgtcgcc 237778
>gb|AC153967.5| Mus musculus 10 BAC RP24-372A5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 205657 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Plus Query: 175 tttcttccccctccccttctcc 196 |||||||||||||||||||||| Sbjct: 202262 tttcttccccctccccttctcc 202283
>ref|NM_080161.1| Drosophila melanogaster virilizer CG3496-RA (vir), mRNA Length = 5695 Score = 44.1 bits (22), Expect = 0.18 Identities = 25/26 (96%) Strand = Plus / Minus Query: 19 cgtcctcctcctcgtcgtcgccgatg 44 |||| ||||||||||||||||||||| Sbjct: 1102 cgtcgtcctcctcgtcgtcgccgatg 1077
>gb|AC008304.3|AC008304 Drosophila melanogaster, chromosome 2R, region 59D2-59D3, BAC clone BACR04G19, complete sequence Length = 181955 Score = 44.1 bits (22), Expect = 0.18 Identities = 25/26 (96%) Strand = Plus / Plus Query: 19 cgtcctcctcctcgtcgtcgccgatg 44 |||| ||||||||||||||||||||| Sbjct: 133012 cgtcgtcctcctcgtcgtcgccgatg 133037
>gb|AF281363.1|AF281363 Drosophila melanogaster virilizer (vir) gene, complete cds Length = 6224 Score = 44.1 bits (22), Expect = 0.18 Identities = 25/26 (96%) Strand = Plus / Minus Query: 19 cgtcctcctcctcgtcgtcgccgatg 44 |||| ||||||||||||||||||||| Sbjct: 1488 cgtcgtcctcctcgtcgtcgccgatg 1463
>gb|AC113618.5| Homo sapiens BAC clone RP11-1367O10 from 2, complete sequence Length = 199917 Score = 44.1 bits (22), Expect = 0.18 Identities = 25/26 (96%) Strand = Plus / Plus Query: 175 tttcttccccctccccttctccttct 200 |||||||||| ||||||||||||||| Sbjct: 99529 tttcttccccttccccttctccttct 99554
>dbj|AP004085.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1267_F10 Length = 162669 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 cgtcctcctcctcgtcgtcgcc 40 |||||||||||||||||||||| Sbjct: 58069 cgtcctcctcctcgtcgtcgcc 58048
>gb|AY855164.1| Callithrix jacchus RPGR mRNA, partial cds Length = 1818 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Minus Query: 178 cttccccctccccttctccttc 199 |||||||||||||||||||||| Sbjct: 1153 cttccccctccccttctccttc 1132
>emb|AL672282.9| Mouse DNA sequence from clone RP23-448K19 on chromosome X, complete sequence Length = 167107 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Plus Query: 175 tttcttccccctccccttctcc 196 |||||||||||||||||||||| Sbjct: 97086 tttcttccccctccccttctcc 97107
>gb|AE003460.2| Drosophila melanogaster chromosome 2R, section 68 of 73 of the complete sequence Length = 299331 Score = 44.1 bits (22), Expect = 0.18 Identities = 25/26 (96%) Strand = Plus / Plus Query: 19 cgtcctcctcctcgtcgtcgccgatg 44 |||| ||||||||||||||||||||| Sbjct: 185489 cgtcgtcctcctcgtcgtcgccgatg 185514
>gb|AC145559.4| Mus musculus BAC clone RP23-371A1 from 5, complete sequence Length = 203726 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Plus Query: 180 tccccctccccttctccttctt 201 |||||||||||||||||||||| Sbjct: 182467 tccccctccccttctccttctt 182488
>gb|AC133511.3| Mus musculus BAC clone RP23-413E2 from 10, complete sequence Length = 214377 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Plus Query: 175 tttcttccccctccccttctcc 196 |||||||||||||||||||||| Sbjct: 157221 tttcttccccctccccttctcc 157242
>emb|AL844536.13| Mouse DNA sequence from clone RP23-22A15 on chromosome 2, complete sequence Length = 245993 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Plus Query: 180 tccccctccccttctccttctt 201 |||||||||||||||||||||| Sbjct: 50912 tccccctccccttctccttctt 50933
>gb|AC153540.4| Mus musculus 10 BAC RP23-356N9 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 198205 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Minus Query: 175 tttcttccccctccccttctcc 196 |||||||||||||||||||||| Sbjct: 192526 tttcttccccctccccttctcc 192505
>gb|AC164161.2| Mus musculus BAC clone RP23-274G21 from chromosome 9, complete sequence Length = 198367 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Plus Query: 180 tccccctccccttctccttctt 201 |||||||||||||||||||||| Sbjct: 139983 tccccctccccttctccttctt 140004
>emb|AL732552.8| Mouse DNA sequence from clone RP23-145O14 on chromosome 4, complete sequence Length = 203332 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Plus Query: 173 aatttcttccccctccccttct 194 |||||||||||||||||||||| Sbjct: 27330 aatttcttccccctccccttct 27351
>emb|AL672023.7| Mouse DNA sequence from clone RP23-339O19 on chromosome X, complete sequence Length = 160615 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Plus Query: 173 aatttcttccccctccccttct 194 |||||||||||||||||||||| Sbjct: 124344 aatttcttccccctccccttct 124365
>gb|AC110520.12| Mus musculus chromosome 7, clone RP23-24N16, complete sequence Length = 248540 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 tccccctccccttctccttct 200 ||||||||||||||||||||| Sbjct: 19835 tccccctccccttctccttct 19815
>ref|NM_188358.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1158 Score = 42.1 bits (21), Expect = 0.70 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 cctcctcctcgtcgtcgccgatgct 46 |||| |||||||||||||||||||| Sbjct: 573 cctcgtcctcgtcgtcgccgatgct 549
>gb|AC165260.2| Mus musculus BAC clone RP23-123E17 from chromosome 13, complete sequence Length = 209914 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Plus Query: 182 cccctccccttctccttcttg 202 ||||||||||||||||||||| Sbjct: 90921 cccctccccttctccttcttg 90941
>ref|XM_468250.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1309 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 ctcctcctcgtcgtcgccgat 43 ||||||||||||||||||||| Sbjct: 834 ctcctcctcgtcgtcgccgat 814
>ref|XM_467643.1| Oryza sativa (japonica cultivar-group), mRNA Length = 573 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 ccgccgcccgtcctcctcctc 31 ||||||||||||||||||||| Sbjct: 255 ccgccgcccgtcctcctcctc 235
>ref|XM_465978.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1512 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 tcctcctcctcgtcgtcgccg 41 ||||||||||||||||||||| Sbjct: 335 tcctcctcctcgtcgtcgccg 355
>ref|XM_464982.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1363 Score = 42.1 bits (21), Expect = 0.70 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 9 cgccgccgcccgtcctcctcctcgtcgtc 37 ||||||||||| ||||||||||||||||| Sbjct: 72 cgccgccgccc-tcctcctcctcgtcgtc 99
>gb|AC104882.30| Mus musculus chromosome 8, clone RP23-401L9, complete sequence Length = 209525 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 tcttccccctccccttctcct 197 ||||||||||||||||||||| Sbjct: 183120 tcttccccctccccttctcct 183100
>gb|AC093088.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1001_G01, complete sequence Length = 122768 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 tcctcctcctcgtcgtcgccg 41 ||||||||||||||||||||| Sbjct: 51673 tcctcctcctcgtcgtcgccg 51653
>gb|AC137110.11| Mus musculus chromosome 7, clone RP23-399P8, complete sequence Length = 199827 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 ttccccctccccttctccttc 199 ||||||||||||||||||||| Sbjct: 19147 ttccccctccccttctccttc 19127
>gb|AC158215.3| Mus musculus chromosome 7, clone RP24-180E12, complete sequence Length = 156342 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 ttccccctccccttctccttc 199 ||||||||||||||||||||| Sbjct: 67458 ttccccctccccttctccttc 67438
>gb|AC161000.5| Mus musculus BAC clone RP23-51A9 from chromosome 13, complete sequence Length = 216751 Score = 42.1 bits (21), Expect = 0.70 Identities = 24/25 (96%) Strand = Plus / Plus Query: 176 ttcttccccctccccttctccttct 200 ||||||| ||||||||||||||||| Sbjct: 163702 ttcttcctcctccccttctccttct 163726
>ref|XM_539685.2| PREDICTED: Canis familiaris similar to sal-like 2 (LOC482568), mRNA Length = 2187 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Plus Query: 18 ccgtcctcctcctcgtcgtcg 38 ||||||||||||||||||||| Sbjct: 445 ccgtcctcctcctcgtcgtcg 465
>gb|AC112676.8| Mus musculus chromosome 9, clone RP23-174F7, complete sequence Length = 230293 Score = 42.1 bits (21), Expect = 0.70 Identities = 24/25 (96%) Strand = Plus / Minus Query: 175 tttcttccccctccccttctccttc 199 |||||||||||||||||| |||||| Sbjct: 207274 tttcttccccctccccttttccttc 207250
>gb|AC123949.5| Mus musculus BAC clone RP23-119H13 from 14, complete sequence Length = 196995 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 tccccctccccttctccttct 200 ||||||||||||||||||||| Sbjct: 170277 tccccctccccttctccttct 170297
>emb|AL928544.5| Mouse DNA sequence from clone RP23-358C5 on chromosome 2, complete sequence Length = 126329 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 tccccctccccttctccttct 200 ||||||||||||||||||||| Sbjct: 38355 tccccctccccttctccttct 38375
>gb|AC103930.10| Mus musculus chromosome 5, clone RP23-238D18, complete sequence Length = 203246 Score = 42.1 bits (21), Expect = 0.70 Identities = 24/25 (96%) Strand = Plus / Minus Query: 176 ttcttccccctccccttctccttct 200 ||||||||| ||||||||||||||| Sbjct: 53457 ttcttccccttccccttctccttct 53433
>gb|AC110178.6| Mus musculus chromosome 16, clone RP24-398M18, complete sequence Length = 167120 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Plus Query: 181 ccccctccccttctccttctt 201 ||||||||||||||||||||| Sbjct: 12370 ccccctccccttctccttctt 12390
>emb|AJ011712.1|HSA011712 Homo sapiens TNNT1 gene, exons 1-11 (and joined CDS) Length = 16689 Score = 42.1 bits (21), Expect = 0.70 Identities = 24/25 (96%) Strand = Plus / Plus Query: 176 ttcttccccctccccttctccttct 200 ||||||||| ||||||||||||||| Sbjct: 6412 ttcttccccttccccttctccttct 6436
>gb|AC126071.5| Rattus norvegicus 10 BAC CH230-209B21 (Children's Hospital Oakland Research Institute) complete sequence Length = 227741 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 tccccctccccttctccttct 200 ||||||||||||||||||||| Sbjct: 81388 tccccctccccttctccttct 81368
>emb|AL121984.14|HSA277C14 Human DNA sequence from clone RP11-277C14 on chromosome 1 Contains part of the DNM3 gene for dynamin 3, complete sequence Length = 155941 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 atttcttccccctccccttct 194 ||||||||||||||||||||| Sbjct: 109607 atttcttccccctccccttct 109627
>gb|AC016942.13| Homo sapiens 3 BAC RP11-536K4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 152014 Score = 42.1 bits (21), Expect = 0.70 Identities = 24/25 (96%) Strand = Plus / Plus Query: 177 tcttccccctccccttctccttctt 201 |||||||| |||||||||||||||| Sbjct: 147626 tcttccccttccccttctccttctt 147650
>gb|AC166324.1| Mus musculus BAC clone RP24-500J7 from chromosome 9, complete sequence Length = 168018 Score = 42.1 bits (21), Expect = 0.70 Identities = 24/25 (96%) Strand = Plus / Minus Query: 176 ttcttccccctccccttctccttct 200 ||||||||| ||||||||||||||| Sbjct: 86508 ttcttccccttccccttctccttct 86484
>gb|AC010327.8| Homo sapiens chromosome 19 clone CTD-2587H24, complete sequence Length = 146664 Score = 42.1 bits (21), Expect = 0.70 Identities = 24/25 (96%) Strand = Plus / Minus Query: 176 ttcttccccctccccttctccttct 200 ||||||||| ||||||||||||||| Sbjct: 38788 ttcttccccttccccttctccttct 38764
>gb|AC163691.4| Mus musculus BAC clone RP24-1D8 from chromosome y, complete sequence Length = 165543 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 ttccccctccccttctccttc 199 ||||||||||||||||||||| Sbjct: 33526 ttccccctccccttctccttc 33506
>gb|AC159280.2| Mus musculus BAC clone RP23-347A2 from chromosome 13, complete sequence Length = 200540 Score = 42.1 bits (21), Expect = 0.70 Identities = 24/25 (96%) Strand = Plus / Plus Query: 176 ttcttccccctccccttctccttct 200 ||||||| ||||||||||||||||| Sbjct: 32750 ttcttcctcctccccttctccttct 32774
>gb|AC160960.5| Mus musculus BAC clone RP24-230O19 from chromosome 13, complete sequence Length = 152915 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 cccctccccttctccttcttg 202 ||||||||||||||||||||| Sbjct: 36322 cccctccccttctccttcttg 36302
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 tgcgccgccgcccgtcctcct 27 ||||||||||||||||||||| Sbjct: 25448264 tgcgccgccgcccgtcctcct 25448244 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cgtcctcctcctcgtcgtcg 38 |||||||||||||||||||| Sbjct: 27402041 cgtcctcctcctcgtcgtcg 27402060 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 gtcctcctcctcgtcgtcgc 39 |||||||||||||||||||| Sbjct: 25419835 gtcctcctcctcgtcgtcgc 25419816 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cgtcctcctcctcgtcgtcg 38 |||||||||||||||||||| Sbjct: 22748556 cgtcctcctcctcgtcgtcg 22748575
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 tcctcctcctcgtcgtcgccg 41 ||||||||||||||||||||| Sbjct: 13009670 tcctcctcctcgtcgtcgccg 13009650 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ccgtcctcctcctcgtcgtc 37 |||||||||||||||||||| Sbjct: 29275846 ccgtcctcctcctcgtcgtc 29275827 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 tcctcctcctcgtcgtcgcc 40 |||||||||||||||||||| Sbjct: 24245026 tcctcctcctcgtcgtcgcc 24245045 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cgtcctcctcctcgtcgtcg 38 |||||||||||||||||||| Sbjct: 2123418 cgtcctcctcctcgtcgtcg 2123437
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 tcctcctcctcgtcgtcgccg 41 ||||||||||||||||||||| Sbjct: 21927314 tcctcctcctcgtcgtcgccg 21927294 Score = 42.1 bits (21), Expect = 0.70 Identities = 24/25 (96%) Strand = Plus / Minus Query: 17 cccgtcctcctcctcgtcgtcgccg 41 |||| |||||||||||||||||||| Sbjct: 7202087 cccgccctcctcctcgtcgtcgccg 7202063 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 cgccgccgcccgtcctcctc 28 |||||||||||||||||||| Sbjct: 9486744 cgccgccgcccgtcctcctc 9486725
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 tcctcctcctcgtcgtcgccg 41 ||||||||||||||||||||| Sbjct: 1096062 tcctcctcctcgtcgtcgccg 1096042 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 ccgtcctcctcctcgtcgtc 37 |||||||||||||||||||| Sbjct: 18730942 ccgtcctcctcctcgtcgtc 18730961 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cgtcctcctcctcgtcgtcg 38 |||||||||||||||||||| Sbjct: 4530189 cgtcctcctcctcgtcgtcg 4530208 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 tcctcctcctcgtcgtcgccgatg 44 |||||||||||||||||| ||||| Sbjct: 2679696 tcctcctcctcgtcgtcgtcgatg 2679719
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 0.70 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 cctcctcctcgtcgtcgccgatgct 46 |||| |||||||||||||||||||| Sbjct: 5856335 cctcgtcctcgtcgtcgccgatgct 5856311
>gb|AF170446.1|AF169632S2 Mus musculus prostate stromal protein ps20 (Wfdc1) gene, exons 2 through 7 and complete cds Length = 11141 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 177 tcttccccctccccttctcct 197 ||||||||||||||||||||| Sbjct: 11052 tcttccccctccccttctcct 11032
>ref|XM_345513.1| PREDICTED: Rattus norvegicus similar to hypothetical GTP-binding protein RAGD (LOC366342), mRNA Length = 330 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 tcctcctcctcgtcgtcgccg 41 ||||||||||||||||||||| Sbjct: 65 tcctcctcctcgtcgtcgccg 45
>ref|XM_216363.3| PREDICTED: Rattus norvegicus Ras-related GTP binding D (predicted) (Rragd_predicted), mRNA Length = 1209 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 tcctcctcctcgtcgtcgccg 41 ||||||||||||||||||||| Sbjct: 74 tcctcctcctcgtcgtcgccg 54
>dbj|AP003052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0016I09 Length = 148517 Score = 42.1 bits (21), Expect = 0.70 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 cctcctcctcgtcgtcgccgatgct 46 |||| |||||||||||||||||||| Sbjct: 60076 cctcgtcctcgtcgtcgccgatgct 60052
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Plus Query: 25 cctcctcgtcgtcgccgatgc 45 ||||||||||||||||||||| Sbjct: 4343494 cctcctcgtcgtcgccgatgc 4343514
>dbj|AP004729.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0006A22 Length = 190690 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 tcctcctcctcgtcgtcgccg 41 ||||||||||||||||||||| Sbjct: 149799 tcctcctcctcgtcgtcgccg 149779
>dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0068B06 Length = 143712 Score = 42.1 bits (21), Expect = 0.70 Identities = 24/25 (96%) Strand = Plus / Minus Query: 17 cccgtcctcctcctcgtcgtcgccg 41 |||| |||||||||||||||||||| Sbjct: 79498 cccgccctcctcctcgtcgtcgccg 79474
>dbj|AP006850.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, fosmid clone:OSJNOa257A21 Length = 34833 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 tcctcctcctcgtcgtcgccg 41 ||||||||||||||||||||| Sbjct: 29376 tcctcctcctcgtcgtcgccg 29356
>dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0052G07 Length = 156207 Score = 42.1 bits (21), Expect = 0.70 Identities = 24/25 (96%) Strand = Plus / Minus Query: 17 cccgtcctcctcctcgtcgtcgccg 41 |||| |||||||||||||||||||| Sbjct: 37091 cccgccctcctcctcgtcgtcgccg 37067
>dbj|AP005247.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0077F02 Length = 172442 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 tcctcctcctcgtcgtcgccg 41 ||||||||||||||||||||| Sbjct: 83967 tcctcctcctcgtcgtcgccg 83947
>dbj|AP005536.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0055M07 Length = 150901 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 tcctcctcctcgtcgtcgccg 41 ||||||||||||||||||||| Sbjct: 143110 tcctcctcctcgtcgtcgccg 143090
>dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0444A09 Length = 125900 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 tcctcctcctcgtcgtcgccg 41 ||||||||||||||||||||| Sbjct: 36554 tcctcctcctcgtcgtcgccg 36534
>dbj|AP005845.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0461D06 Length = 112895 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 tcctcctcctcgtcgtcgccg 41 ||||||||||||||||||||| Sbjct: 8667 tcctcctcctcgtcgtcgccg 8647
>dbj|AP004001.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1115_D03 Length = 169378 Score = 42.1 bits (21), Expect = 0.70 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 9 cgccgccgcccgtcctcctcctcgtcgtc 37 ||||||||||| ||||||||||||||||| Sbjct: 97617 cgccgccgccc-tcctcctcctcgtcgtc 97644
>dbj|AP004094.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1695_H09 Length = 114721 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 ctcctcctcgtcgtcgccgat 43 ||||||||||||||||||||| Sbjct: 41081 ctcctcctcgtcgtcgccgat 41061
>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643A10 Length = 187931 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Plus Query: 11 ccgccgcccgtcctcctcctc 31 ||||||||||||||||||||| Sbjct: 108459 ccgccgcccgtcctcctcctc 108479
>dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0711H09 Length = 185858 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 tgcgccgccgcccgtcctcct 27 ||||||||||||||||||||| Sbjct: 79580 tgcgccgccgcccgtcctcct 79560 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 gtcctcctcctcgtcgtcgc 39 |||||||||||||||||||| Sbjct: 51151 gtcctcctcctcgtcgtcgc 51132
>dbj|AK107758.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-A06, full insert sequence Length = 940 Score = 42.1 bits (21), Expect = 0.70 Identities = 24/25 (96%) Strand = Plus / Plus Query: 17 cccgtcctcctcctcgtcgtcgccg 41 |||| |||||||||||||||||||| Sbjct: 171 cccgccctcctcctcgtcgtcgccg 195
>dbj|AK106456.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-F12, full insert sequence Length = 1593 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Plus Query: 23 ctcctcctcgtcgtcgccgat 43 ||||||||||||||||||||| Sbjct: 504 ctcctcctcgtcgtcgccgat 524
>dbj|AK068281.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146J12, full insert sequence Length = 1512 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 tcctcctcctcgtcgtcgccg 41 ||||||||||||||||||||| Sbjct: 335 tcctcctcctcgtcgtcgccg 355
>dbj|AK064649.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-D10, full insert sequence Length = 697 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 tcctcctcctcgtcgtcgccg 41 ||||||||||||||||||||| Sbjct: 640 tcctcctcctcgtcgtcgccg 620
>gb|AC154719.2| Mus musculus BAC clone RP24-370O15 from 16, complete sequence Length = 163408 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 ccccctccccttctccttctt 201 ||||||||||||||||||||| Sbjct: 38109 ccccctccccttctccttctt 38089
>dbj|AK059349.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-C08, full insert sequence Length = 1309 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 23 ctcctcctcgtcgtcgccgat 43 ||||||||||||||||||||| Sbjct: 834 ctcctcctcgtcgtcgccgat 814
>dbj|AK058880.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-B05, full insert sequence Length = 1363 Score = 42.1 bits (21), Expect = 0.70 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Plus Query: 9 cgccgccgcccgtcctcctcctcgtcgtc 37 ||||||||||| ||||||||||||||||| Sbjct: 72 cgccgccgccc-tcctcctcctcgtcgtc 99
>gb|AC138245.11| Mus musculus chromosome 17, clone RP23-75D10, complete sequence Length = 216692 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 cttccccctccccttctcctt 198 ||||||||||||||||||||| Sbjct: 144781 cttccccctccccttctcctt 144761
>emb|CT030659.8| Mouse DNA sequence from clone RP23-125F8 on chromosome 9, complete sequence Length = 199662 Score = 42.1 bits (21), Expect = 0.70 Identities = 24/25 (96%) Strand = Plus / Minus Query: 176 ttcttccccctccccttctccttct 200 ||||||||| ||||||||||||||| Sbjct: 170539 ttcttccccttccccttctccttct 170515
>gb|AC160967.4| Mus musculus BAC clone RP24-385N6 from chromosome y, complete sequence Length = 150231 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 ttccccctccccttctccttc 199 ||||||||||||||||||||| Sbjct: 18586 ttccccctccccttctccttc 18566
>emb|AJ628421.2| Micromonospora olivasterospora fortimicin biosynthesis gene cluster, strain DSM 43868 Length = 47238 Score = 42.1 bits (21), Expect = 0.70 Identities = 27/29 (93%) Strand = Plus / Plus Query: 13 gccgcccgtcctcctcctcgtcgtcgccg 41 |||||||| ||||| |||||||||||||| Sbjct: 43591 gccgcccggcctccgcctcgtcgtcgccg 43619
>gb|AY685117.1| Oryza sativa (japonica cultivar-group) transcription factor AP2D23-like (AP2D23) mRNA, complete cds Length = 1539 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 tcctcctcctcgtcgtcgccg 41 ||||||||||||||||||||| Sbjct: 1378 tcctcctcctcgtcgtcgccg 1398
>emb|AL928791.10| Mouse DNA sequence from clone RP23-65N20 on chromosome 2, complete sequence Length = 210148 Score = 42.1 bits (21), Expect = 0.70 Identities = 24/25 (96%) Strand = Plus / Minus Query: 178 cttccccctccccttctccttcttg 202 ||||||| ||||||||||||||||| Sbjct: 101080 cttccccttccccttctccttcttg 101056
>emb|CT030690.6| Mouse DNA sequence from clone RP23-65J10 on chromosome 16, complete sequence Length = 220861 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 181 ccccctccccttctccttctt 201 ||||||||||||||||||||| Sbjct: 220164 ccccctccccttctccttctt 220144
>gb|AC140393.3| Mus musculus BAC clone RP24-179D17 from 14, complete sequence Length = 184279 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 tccccctccccttctccttct 200 ||||||||||||||||||||| Sbjct: 162677 tccccctccccttctccttct 162657
>emb|AL773534.10| Mouse DNA sequence from clone RP23-183O12 on chromosome 2, complete sequence Length = 216706 Score = 42.1 bits (21), Expect = 0.70 Identities = 24/25 (96%) Strand = Plus / Plus Query: 177 tcttccccctccccttctccttctt 201 |||||||| |||||||||||||||| Sbjct: 181384 tcttccccttccccttctccttctt 181408
>emb|AL672219.7| Mouse DNA sequence from clone RP23-456B9 on chromosome 9, complete sequence Length = 206125 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 tccccctccccttctccttct 200 ||||||||||||||||||||| Sbjct: 91877 tccccctccccttctccttct 91897
>emb|AL807816.7| Mouse DNA sequence from clone RP23-13H12 on chromosome X, complete sequence Length = 193219 Score = 42.1 bits (21), Expect = 0.70 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 cttccccctccccttctcctt 198 ||||||||||||||||||||| Sbjct: 142135 cttccccctccccttctcctt 142115
>emb|AL806518.6| Mouse DNA sequence from clone RP23-25B10 on chromosome 4, complete sequence Length = 224459 Score = 42.1 bits (21), Expect = 0.70 Identities = 24/25 (96%) Strand = Plus / Plus Query: 177 tcttccccctccccttctccttctt 201 |||| |||||||||||||||||||| Sbjct: 139946 tctttcccctccccttctccttctt 139970
>gb|AC101593.16| Mus musculus chromosome 18, clone RP23-198A7, complete sequence Length = 206936 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 cccctccccttctccttctt 201 |||||||||||||||||||| Sbjct: 200471 cccctccccttctccttctt 200452
>gb|AC103399.9| Mus musculus chromosome 3, clone RP23-310N18, complete sequence Length = 154918 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 cttccccctccccttctccttctt 201 ||||||| |||||||||||||||| Sbjct: 115802 cttccccttccccttctccttctt 115779
>gb|AC131083.8| Mus musculus chromosome 1, clone RP23-444L13, complete sequence Length = 182591 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 176 ttcttccccctccccttctccttc 199 |||||||||||||||||| ||||| Sbjct: 176475 ttcttccccctccccttccccttc 176452
>gb|AC159317.3| Mus musculus BAC clone RP23-76I20 from chromosome 16, complete sequence Length = 224160 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 cttccccctccccttctcct 197 |||||||||||||||||||| Sbjct: 202402 cttccccctccccttctcct 202383
>gb|AC159286.3| Mus musculus BAC clone RP23-314E22 from chromosome 14, complete sequence Length = 210984 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 cttccccctccccttctccttctt 201 ||||||| |||||||||||||||| Sbjct: 174175 cttccccttccccttctccttctt 174198
>ref|XM_483641.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2212 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cgtcctcctcctcgtcgtcg 38 |||||||||||||||||||| Sbjct: 305 cgtcctcctcctcgtcgtcg 324
>ref|XM_507320.1| PREDICTED Oryza sativa (japonica cultivar-group), P0544G09.9 mRNA Length = 2218 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cgtcctcctcctcgtcgtcg 38 |||||||||||||||||||| Sbjct: 306 cgtcctcctcctcgtcgtcg 325
>ref|XM_483317.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1686 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 gtcctcctcctcgtcgtcgc 39 |||||||||||||||||||| Sbjct: 303 gtcctcctcctcgtcgtcgc 284
>ref|XM_482820.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1236 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cgtcctcctcctcgtcgtcg 38 |||||||||||||||||||| Sbjct: 995 cgtcctcctcctcgtcgtcg 1014
>ref|XM_475183.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3213 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ccgtcctcctcctcgtcgtc 37 |||||||||||||||||||| Sbjct: 470 ccgtcctcctcctcgtcgtc 451
>ref|XM_474283.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 987 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tcctcctcctcgtcgtcgcc 40 |||||||||||||||||||| Sbjct: 536 tcctcctcctcgtcgtcgcc 517
>gb|DQ215740.1| Taeniopygia guttata clone 0061P0016H11 RIKEN cDNA 6330578E17 variant 1-like mRNA, complete sequence Length = 562 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cgcccgtcctcctcctcgtc 34 |||||||||||||||||||| Sbjct: 98 cgcccgtcctcctcctcgtc 79
>ref|NM_185533.1| Oryza sativa (japonica cultivar-group), mRNA Length = 678 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ccgtcctcctcctcgtcgtc 37 |||||||||||||||||||| Sbjct: 431 ccgtcctcctcctcgtcgtc 412
>ref|NM_175736.3| Homo sapiens formin-like 3 (FMNL3), transcript variant 1, mRNA Length = 10989 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 182 cccctccccttctccttcttgatt 205 |||||| ||||||||||||||||| Sbjct: 4918 cccctcaccttctccttcttgatt 4941
>ref|NM_198900.1| Homo sapiens formin-like 3 (FMNL3), transcript variant 2, mRNA Length = 10836 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 182 cccctccccttctccttcttgatt 205 |||||| ||||||||||||||||| Sbjct: 4765 cccctcaccttctccttcttgatt 4788
>ref|XM_476599.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3268 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cgtcctcctcctcgtcgtcg 38 |||||||||||||||||||| Sbjct: 390 cgtcctcctcctcgtcgtcg 371
>gb|AC120406.27| Mus musculus chromosome 12, clone RP24-418L10, complete sequence Length = 198624 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 cttccccctccccttctcct 197 |||||||||||||||||||| Sbjct: 10797 cttccccctccccttctcct 10816
>gb|AC113271.10| Mus musculus chromosome 5, clone RP23-376H8, complete sequence Length = 185353 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 cttccccctccccttctcct 197 |||||||||||||||||||| Sbjct: 52920 cttccccctccccttctcct 52901
>gb|AC119897.8| Mus musculus chromosome 1, clone RP24-227F14, complete sequence Length = 195375 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 tccccctccccttctccttc 199 |||||||||||||||||||| Sbjct: 98359 tccccctccccttctccttc 98378
>gb|AC133608.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0085G12, complete sequence Length = 121470 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 10 gccgccgcccgtcctcctcctcgt 33 ||||||||||| |||||||||||| Sbjct: 58389 gccgccgcccggcctcctcctcgt 58412
>gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J22, complete sequence Length = 173903 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 tcctcctcctcgtcgtcgccgatg 44 |||||||||||||||||| ||||| Sbjct: 126216 tcctcctcctcgtcgtcgtcgatg 126239
>ref|XM_617975.2| PREDICTED: Bos taurus similar to AE binding protein 2, transcript variant 1 (LOC537791), mRNA Length = 3295 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cgtcctcctcctcgtcgtcg 38 |||||||||||||||||||| Sbjct: 306 cgtcctcctcctcgtcgtcg 287
>ref|XM_875665.1| PREDICTED: Bos taurus similar to AE binding protein 2, transcript variant 2 (LOC537791), mRNA Length = 4617 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cgtcctcctcctcgtcgtcg 38 |||||||||||||||||||| Sbjct: 286 cgtcctcctcctcgtcgtcg 267
>ref|XM_415842.1| PREDICTED: Gallus gallus similar to hypothetical protein FLJ20343 (LOC417597), mRNA Length = 874 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ccgtcctcctcctcgtcgtc 37 |||||||||||||||||||| Sbjct: 21 ccgtcctcctcctcgtcgtc 2
>ref|XM_415841.1| PREDICTED: Gallus gallus hypothetical gene supported by BX930146; BX930195; BX930508; BX930536; BX932215; BX932438; BX933260 (LOC417596), mRNA Length = 1077 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 ccgtcctcctcctcgtcgtc 37 |||||||||||||||||||| Sbjct: 52 ccgtcctcctcctcgtcgtc 71
>gb|AC118747.5| Mus musculus chromosome 5, clone RP24-194J1, complete sequence Length = 166351 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 ttccccctccccttctcctt 198 |||||||||||||||||||| Sbjct: 89001 ttccccctccccttctcctt 88982
>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02, complete sequence Length = 156649 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cgtcctcctcctcgtcgtcg 38 |||||||||||||||||||| Sbjct: 40656 cgtcctcctcctcgtcgtcg 40675
>gb|AC134839.3| Mus musculus BAC clone RP24-362O23 from chromosome 19, complete sequence Length = 178560 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 cttccccctccccttctcct 197 |||||||||||||||||||| Sbjct: 127771 cttccccctccccttctcct 127790
>gb|AC115787.6| Mus musculus chromosome 16, clone RP23-212P1, complete sequence Length = 209108 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 cccctccccttctccttctt 201 |||||||||||||||||||| Sbjct: 128920 cccctccccttctccttctt 128901
>ref|XM_955013.1| Neurospora crassa OR74A hypothetical protein (NCU05846.1) partial mRNA Length = 2520 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 177 tcttccccctccccttctccttct 200 |||||||| ||||||||||||||| Sbjct: 2353 tcttccccttccccttctccttct 2330
>ref|XM_325700.1| Neurospora crassa OR74A hypothetical protein (NCU05846.1) partial mRNA Length = 2520 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 177 tcttccccctccccttctccttct 200 |||||||| ||||||||||||||| Sbjct: 2353 tcttccccttccccttctccttct 2330
>gb|AC105773.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1562_H01, complete sequence Length = 88352 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 ccgtcctcctcctcgtcgtc 37 |||||||||||||||||||| Sbjct: 36345 ccgtcctcctcctcgtcgtc 36364
>gb|AC110901.16| Mus musculus chromosome 13, clone RP24-165P9, complete sequence Length = 179128 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 cttccccctccccttctccttctt 201 ||||||| |||||||||||||||| Sbjct: 140110 cttccccttccccttctccttctt 140087
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 gcgccgccgcccgtcctcctcctc 31 ||||||| |||||||||||||||| Sbjct: 1356402 gcgccgctgcccgtcctcctcctc 1356379
>gb|AC145392.2| Mus musculus BAC clone RP24-171E5 from chromosome Y, complete sequence Length = 162238 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 ttccccctccccttctcctt 198 |||||||||||||||||||| Sbjct: 80005 ttccccctccccttctcctt 80024
>gb|AC024957.9| Mus musculus chromosome 16, clone RP23-178A24, complete sequence Length = 229563 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 ttcttccccctccccttctccttc 199 ||||||||| |||||||||||||| Sbjct: 205677 ttcttccccttccccttctccttc 205700
>gb|AC113961.14| Mus musculus chromosome 19, clone RP23-18G1, complete sequence Length = 256791 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 ttccccctccccttctccttcttg 202 |||||||||||||||||| ||||| Sbjct: 102455 ttccccctccccttctccctcttg 102478
>gb|AC099606.13| Mus musculus chromosome 7, clone RP23-360N6, complete sequence Length = 193975 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 cttccccctccccttctccttctt 201 ||||||| |||||||||||||||| Sbjct: 3356 cttccccttccccttctccttctt 3379
>gb|AY366472.1| Human herpesvirus 5 isolate 9 nonfunctional UL141 (UL141) gene, complete sequence Length = 1278 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 cctcctcctcgtcgtcgccg 41 |||||||||||||||||||| Sbjct: 91 cctcctcctcgtcgtcgccg 72
>gb|AC104880.13| Mus musculus chromosome 12, clone RP23-141H24, complete sequence Length = 206848 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 cttccccctccccttctcct 197 |||||||||||||||||||| Sbjct: 84800 cttccccctccccttctcct 84781
>gb|AC131105.4| Mus musculus BAC clone RP23-280N9 from chromosome 19, complete sequence Length = 225527 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 ccccctccccttctccttct 200 |||||||||||||||||||| Sbjct: 76763 ccccctccccttctccttct 76744
>gb|BC009157.1| Mus musculus N-acetyltransferase 5 (ARD1 homolog, S. cerevisiae), mRNA (cDNA clone MGC:6501 IMAGE:2648626), complete cds Length = 1015 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 tttctttctgaaatttcttc 181 |||||||||||||||||||| Sbjct: 344 tttctttctgaaatttcttc 325
>ref|XM_982844.1| PREDICTED: Mus musculus heterogeneous nuclear ribonucleoprotein U-like 2 (Hnrpul2), mRNA Length = 3265 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cgtcctcctcctcgtcgtcg 38 |||||||||||||||||||| Sbjct: 1137 cgtcctcctcctcgtcgtcg 1118
>ref|XM_355145.4| PREDICTED: Mus musculus heterogeneous nuclear ribonucleoprotein U-like 2 (Hnrpul2), mRNA Length = 5726 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cgtcctcctcctcgtcgtcg 38 |||||||||||||||||||| Sbjct: 1137 cgtcctcctcctcgtcgtcg 1118
>ref|XM_980053.1| PREDICTED: Mus musculus heterogeneous nuclear ribonucleoprotein U-like 2 (Hnrpul2), mRNA Length = 2471 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cgtcctcctcctcgtcgtcg 38 |||||||||||||||||||| Sbjct: 439 cgtcctcctcctcgtcgtcg 420
>ref|XM_845004.1| PREDICTED: Canis familiaris similar to skeletal muscle calsequestrin 1, transcript variant 1 (LOC608401), mRNA Length = 1928 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cgtcctcctcctcgtcgtcg 38 |||||||||||||||||||| Sbjct: 1470 cgtcctcctcctcgtcgtcg 1451
>ref|XM_855533.1| PREDICTED: Canis familiaris similar to skeletal muscle calsequestrin 1, transcript variant 2 (LOC608401), mRNA Length = 2009 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cgtcctcctcctcgtcgtcg 38 |||||||||||||||||||| Sbjct: 1551 cgtcctcctcctcgtcgtcg 1532
>gb|AC025353.9| Mus musculus chromosome 9, clone RP23-93E19, complete sequence Length = 274853 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 ccccctccccttctccttct 200 |||||||||||||||||||| Sbjct: 219673 ccccctccccttctccttct 219654
>gb|AC110257.12| Mus musculus chromosome 3, clone RP23-276I11, complete sequence Length = 178635 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 ttccccctccccttctcctt 198 |||||||||||||||||||| Sbjct: 94560 ttccccctccccttctcctt 94579
>gb|AC136018.5| Mus musculus BAC clone RP24-125E6 from chromosome 7, complete sequence Length = 210491 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 ttccccctccccttctcctt 198 |||||||||||||||||||| Sbjct: 100921 ttccccctccccttctcctt 100902
>emb|AL669948.8| Mouse DNA sequence from clone RP23-248K2 on chromosome 11, complete sequence Length = 223030 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 cttccccctccccttctccttctt 201 ||||||| |||||||||||||||| Sbjct: 91646 cttccccttccccttctccttctt 91669
>gb|AC121257.6| Mus musculus chromosome 14, clone RP24-202E4, complete sequence Length = 188883 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 cttccccctccccttctccttctt 201 ||||||| |||||||||||||||| Sbjct: 70777 cttccccttccccttctccttctt 70754
>ref|XM_532240.2| PREDICTED: Canis familiaris similar to Y57A10A.26 (LOC475003), mRNA Length = 2278 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 cgccgcccgtcctcctcctc 31 |||||||||||||||||||| Sbjct: 382 cgccgcccgtcctcctcctc 401
>gb|AC124372.4| Mus musculus BAC clone RP24-556P17 from chromosome 16, complete sequence Length = 197211 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 cttccccctccccttctcct 197 |||||||||||||||||||| Sbjct: 182403 cttccccctccccttctcct 182422
>gb|AC131684.4| Mus musculus BAC clone RP23-371K6 from chromosome 10, complete sequence Length = 190874 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 cttccccctccccttctcct 197 |||||||||||||||||||| Sbjct: 190421 cttccccctccccttctcct 190440
>gb|AC124687.4| Mus musculus BAC clone RP24-447D15 from chromosome 13, complete sequence Length = 176871 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 cttccccctccccttctcct 197 |||||||||||||||||||| Sbjct: 82410 cttccccctccccttctcct 82429
>gb|AC130207.3| Mus musculus BAC clone RP24-461N3 from chromosome 19, complete sequence Length = 134655 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 tcttccccctccccttctccttct 200 |||||||| ||||||||||||||| Sbjct: 70130 tcttccccttccccttctccttct 70153
>gb|AC129217.3| Mus musculus BAC clone RP24-458M20 from chromosome 19, complete sequence Length = 175796 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cgtcctcctcctcgtcgtcg 38 |||||||||||||||||||| Sbjct: 53336 cgtcctcctcctcgtcgtcg 53317
>gb|AC124359.3| Mus musculus BAC clone RP24-495G2 from chromosome 1, complete sequence Length = 174750 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 cttccccctccccttctcct 197 |||||||||||||||||||| Sbjct: 5591 cttccccctccccttctcct 5610
>gb|AC124413.2| Mus musculus BAC clone RP24-280K5 from chromosome 10, complete sequence Length = 178858 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 ttccccctccccttctccttcttg 202 |||||||| ||||||||||||||| Sbjct: 96574 ttcccccttcccttctccttcttg 96551
>gb|AC125517.4| Mus musculus BAC clone RP24-261P6 from chromosome 3, complete sequence Length = 193517 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 cttccccctccccttctcct 197 |||||||||||||||||||| Sbjct: 156876 cttccccctccccttctcct 156857
>gb|AC126280.4| Mus musculus BAC clone RP23-10P23 from 16, complete sequence Length = 211237 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 cttccccctccccttctccttctt 201 ||||||| |||||||||||||||| Sbjct: 125566 cttccccttccccttctccttctt 125543
>gb|AC121957.2| Mus musculus BAC clone RP24-232G13 from 18, complete sequence Length = 178929 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 cccctccccttctccttctt 201 |||||||||||||||||||| Sbjct: 18251 cccctccccttctccttctt 18232
>gb|AC087420.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-314O1, complete sequence Length = 232462 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 cttccccctccccttctcct 197 |||||||||||||||||||| Sbjct: 136249 cttccccctccccttctcct 136268
>gb|AC102604.13| Mus musculus chromosome 19, clone RP23-385L22, complete sequence Length = 212387 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 cttccccctccccttctcct 197 |||||||||||||||||||| Sbjct: 56922 cttccccctccccttctcct 56903
>gb|AC118474.10| Mus musculus chromosome 8, clone RP23-288O12, complete sequence Length = 191490 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 tttctttctgaaatttcttc 181 |||||||||||||||||||| Sbjct: 92495 tttctttctgaaatttcttc 92476
>gb|AC163720.2| Mus musculus BAC clone RP23-424C5 from chromosome 16, complete sequence Length = 206284 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 cttccccctccccttctccttctt 201 ||||||| |||||||||||||||| Sbjct: 190737 cttccccttccccttctccttctt 190760
>gb|AC128952.4| Rattus norvegicus 14 BAC CH230-510F9 (Children's Hospital Oakland Research Institute) complete sequence Length = 170859 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 cttccccctccccttctccttctt 201 ||||||| |||||||||||||||| Sbjct: 94316 cttccccttccccttctccttctt 94339
>emb|AL683813.10| Human DNA sequence from clone RP11-1114A5 on chromosome X Contains the 5' end of the ARHGEF6 gene for Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6, a ribosomal protein L7 (RPL7) pseudogene, a RAN member RAS oncogene family pseudogene, a novel gene, the RNMX gene for RNA binding motif protein (X chromosome), the 5' end of a novel gene and two CpG islands, complete sequence Length = 148654 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 tcttccccctccccttctccttct 200 |||||||||||| ||||||||||| Sbjct: 143664 tcttccccctcctcttctccttct 143687
>emb|AL355333.18| Human DNA sequence from clone RP11-575N15 on chromosome 10, complete sequence Length = 180545 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 tcttccccctccccttctccttct 200 |||||||| ||||||||||||||| Sbjct: 37528 tcttccccttccccttctccttct 37551
>emb|AL355003.10| Human DNA sequence from clone RP11-753M10 on chromosome 13, complete sequence Length = 133309 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 cttccccctccccttctccttctt 201 ||||||| |||||||||||||||| Sbjct: 89003 cttccccttccccttctccttctt 89026
>emb|AL353151.26| Human DNA sequence from clone RP11-307I14 on chromosome 9 Contains the 5' end of the AK3L1 gene for adenylate kinase 3 like 1 (AK3), a ribosomal protein S5 (RPS5) pseudogene, the 5' end of the gene for RNA cyclase homolog (RNAC), a Kruppel-like factor 4 (gut) (KLF4) pseudogene and 2 CpG islands, complete sequence Length = 112573 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 cttccccctccccttctccttctt 201 ||||||| |||||||||||||||| Sbjct: 86334 cttccccttccccttctccttctt 86311
>emb|AL158214.33| Human DNA sequence from clone RP11-543E8 on chromosome 1q42.2-43 Contains a novel gene, a ribosomal protein S24 (RPS24) pseudogene, the COG2 gene for component of oligomeric golgi complex 2, the 3' end of the AGT gene for angiotensinogen (serine (or cysteine) proteinase inhibitor,clade A (alpha-1 antiproteinase, antitrypsin), member 8) and a CpG island, complete sequence Length = 181175 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 cttccccctccccttctccttctt 201 ||||||| |||||||||||||||| Sbjct: 55422 cttccccttccccttctccttctt 55445
>emb|AL160395.24| Human DNA sequence from clone RP11-474D23 on chromosome 13q33.1-34 Contains a the 3' end of a novel gene (MGC35169) and 2 CpG islands, complete sequence Length = 179959 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 177 tcttccccctccccttctccttct 200 |||||||||||||| ||||||||| Sbjct: 143152 tcttccccctccccctctccttct 143129
>gb|AC109707.5| Rattus norvegicus 13 BAC CH230-157O1 (Children's Hospital Oakland Research Institute) complete sequence Length = 205150 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 cttccccctccccttctccttctt 201 ||||||| |||||||||||||||| Sbjct: 19759 cttccccttccccttctccttctt 19736
>emb|CR933736.12| Mouse DNA sequence from clone DN-183N8 on chromosome 11, complete sequence Length = 194230 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 tccccctccccttctccttc 199 |||||||||||||||||||| Sbjct: 148092 tccccctccccttctccttc 148111
>gb|AC112001.6| Rattus norvegicus 2 BAC CH230-54E3 (Children's Hospital Oakland Research Institute) complete sequence Length = 225052 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 cttccccctccccttctcct 197 |||||||||||||||||||| Sbjct: 95357 cttccccctccccttctcct 95376
>emb|X75673.1|PCGRP78G P.cinnamomi GRP78/BiP gene Length = 3859 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cgtcctcctcctcgtcgtcg 38 |||||||||||||||||||| Sbjct: 3604 cgtcctcctcctcgtcgtcg 3585
>emb|X75672.1|PCGRP78 P.cinnamomi GRP78/BiP mRNA for glucose regulated protein/BiP Length = 1606 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cgtcctcctcctcgtcgtcg 38 |||||||||||||||||||| Sbjct: 1486 cgtcctcctcctcgtcgtcg 1467
>gb|AC073153.16| Mus musculus Strain C57BL6/J chromosome 19 BAC, RP23-49P8 Complete Sequence, complete sequence Length = 220143 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cgtcctcctcctcgtcgtcg 38 |||||||||||||||||||| Sbjct: 176661 cgtcctcctcctcgtcgtcg 176680
>gb|AC160559.5| Mus musculus BAC clone RP24-404N24 from chromosome 10, complete sequence Length = 157670 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 cttccccctccccttctccttctt 201 ||||||| |||||||||||||||| Sbjct: 136258 cttccccttccccttctccttctt 136235
>gb|AC162905.4| Mus musculus BAC clone RP24-281B12 from chromosome 9, complete sequence Length = 205771 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 ccccctccccttctccttct 200 |||||||||||||||||||| Sbjct: 176591 ccccctccccttctccttct 176572
>emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genome; segment 2/16 Length = 348971 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 cctcctcctcgtcgtcgccg 41 |||||||||||||||||||| Sbjct: 314271 cctcctcctcgtcgtcgccg 314290
>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17, complete sequence Length = 160484 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 cctcctcctcgtcgtcgccg 41 |||||||||||||||||||| Sbjct: 84784 cctcctcctcgtcgtcgccg 84765
>emb|AL603842.9| Mouse DNA sequence from clone RP23-100P23 on chromosome 11 Contains the 5' end of a novel gene, three novel genes, the Slc6a4 gene for solute carrier family 6 (neurotransmitter transporter, serotonin) member 4, the Blmh gene for bleomycin hydrolase and three CpG islands, complete sequence Length = 229289 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 177 tcttccccctccccttctccttct 200 ||||||||||| |||||||||||| Sbjct: 125287 tcttccccctctccttctccttct 125264
>emb|AL592547.9| Mouse DNA sequence from clone RP23-122P1 on chromosome 11 Contains two novel genes, the Chrne gene for cholinergic receptor nicotinic epsilon polypeptide, genes 4930544D05Rik, C730027E14Rik and LOC327956, the gene for mitogen-activated protein kinase kinase kinase kinase 6 (Map4k6-pending), the Pld2 gene for phospholipase D2, the Psmb6 gene for proteasome (prosome, macropain) subunit beta type 6, a ribosomal protein L34 pseudogene, the 3' end of gene 2010003F10Rik and three CpG islands, complete sequence Length = 123943 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 tccccctccccttctccttc 199 |||||||||||||||||||| Sbjct: 9502 tccccctccccttctccttc 9483
>emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043A12, complete sequence Length = 190432 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tcctcctcctcgtcgtcgcc 40 |||||||||||||||||||| Sbjct: 88464 tcctcctcctcgtcgtcgcc 88445
>emb|AL627362.2|CNS07TIX DNA centromeric region sequence from BAC DP15B03, DP38F06 of chromosome 5 of Podospora anserina Length = 156244 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cgtcctcctcctcgtcgtcg 38 |||||||||||||||||||| Sbjct: 53612 cgtcctcctcctcgtcgtcg 53631
>gb|AC163436.3| Mus musculus chromosome 1, clone RP23-102H12, complete sequence Length = 198253 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 cttccccctccccttctccttctt 201 ||||||| |||||||||||||||| Sbjct: 153387 cttccccttccccttctccttctt 153364
>gb|AC091002.54| Mus musculus strain C57BL/6J clone rp23-7n16 map 16, complete sequence Length = 217939 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 tccccctccccttctccttc 199 |||||||||||||||||||| Sbjct: 168779 tccccctccccttctccttc 168760
>emb|AL669844.20| Mouse DNA sequence from clone RP23-395O6 on chromosome 11 Contains the 3' end of a novel gene, a novel gene, the Stk10 gene for serine/threonine kinase 10, the 5' end of the Fbxw1b gene for F-box and WD-40 domain protein 1B and two CpG islands, complete sequence Length = 221145 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 cttccccctccccttctccttctt 201 ||||||| |||||||||||||||| Sbjct: 170603 cttccccttccccttctccttctt 170580
>emb|AL669853.5| Mouse DNA sequence from clone RP23-204F22 on chromosome 11 Contains part of the Abca13 gene for ATP-binding cassette sub-family A (ABC1) member 13, complete sequence Length = 205759 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 cttccccctccccttctccttctt 201 ||||||| |||||||||||||||| Sbjct: 111330 cttccccttccccttctccttctt 111307
>emb|AJ720997.1| Gallus gallus mRNA for hypothetical protein, clone 32b15 Length = 2260 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tcctcctcctcgtcgtcgcc 40 |||||||||||||||||||| Sbjct: 944 tcctcctcctcgtcgtcgcc 925
>gb|AC000004.1| Genomic sequence from Human 17, complete sequence Length = 141878 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 tttcttccccctccccttctcctt 198 |||||||||| ||||||||||||| Sbjct: 48906 tttcttccccttccccttctcctt 48883
>gb|AC090324.7| Homo sapiens chromosome 18, clone RP11-693L9, complete sequence Length = 154516 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 atttcttccccctccccttc 193 |||||||||||||||||||| Sbjct: 51233 atttcttccccctccccttc 51252
>gb|AC162925.4| Mus musculus BAC clone RP23-302D18 from chromosome 6, complete sequence Length = 225947 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 cttccccctccccttctccttctt 201 |||||||||||||||| ||||||| Sbjct: 147760 cttccccctccccttccccttctt 147737
>gb|AC093924.3| Genomic sequence for Mus musculus, clone RP23-239M9, from chromosome 17, complete sequence Length = 166277 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 177 tcttccccctccccttctccttct 200 |||||||||||||| ||||||||| Sbjct: 103426 tcttccccctccccatctccttct 103403
>emb|AL645593.20| Mouse DNA sequence from clone RP23-57I15 on chromosome X, complete sequence Length = 186095 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 ttccccctccccttctcctt 198 |||||||||||||||||||| Sbjct: 136536 ttccccctccccttctcctt 136555
>gb|AY496555.1| Human herpesvirus 5 isolate 9J glycoprotein UL141 gene, complete cds Length = 1277 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 cctcctcctcgtcgtcgccg 41 |||||||||||||||||||| Sbjct: 91 cctcctcctcgtcgtcgccg 72
>ref|NM_023987.2| Rattus norvegicus baculoviral IAP repeat-containing 3 (Birc3), mRNA Length = 2341 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 cttccccctccccttctccttctt 201 ||||||||||||||| |||||||| Sbjct: 49 cttccccctccccttttccttctt 26
>gb|AC009366.8| Drosophila melanogaster 3L BAC RP98-48E10 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 169841 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 tcctcctcctcgtcgtcgcc 40 |||||||||||||||||||| Sbjct: 9691 tcctcctcctcgtcgtcgcc 9710
>gb|AY118463.1| Drosophila melanogaster GM01793 full insert cDNA Length = 886 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tcctcctcctcgtcgtcgcc 40 |||||||||||||||||||| Sbjct: 427 tcctcctcctcgtcgtcgcc 408
>gb|AC113398.3| Homo sapiens chromosome 5 clone RP11-436H11, complete sequence Length = 172613 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 tttcttccccctccccttctcctt 198 ||||| |||||||||||||||||| Sbjct: 24889 tttctaccccctccccttctcctt 24912
>gb|AC112196.3| Homo sapiens chromosome 5 clone RP11-43D2, complete sequence Length = 180001 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 tttcttccccctccccttctcctt 198 ||||| |||||||||||||||||| Sbjct: 122719 tttctaccccctccccttctcctt 122742
>gb|AC153163.2| Ornithorhynchus anatinus BAC clone OABb-434A1 from chromosome unknown, complete sequence Length = 156066 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cgtcctcctcctcgtcgtcg 38 |||||||||||||||||||| Sbjct: 25191 cgtcctcctcctcgtcgtcg 25210
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 gcgcgctcggccccggcctc 80 |||||||||||||||||||| Sbjct: 4436670 gcgcgctcggccccggcctc 4436689
>ref|NM_141129.1| Drosophila melanogaster CG11523-RA (CG11523), mRNA Length = 868 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 tcctcctcctcgtcgtcgcc 40 |||||||||||||||||||| Sbjct: 427 tcctcctcctcgtcgtcgcc 408
>gb|AC160397.9| Mus musculus 6 BAC RP23-279I21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 173003 Score = 40.1 bits (20), Expect = 2.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 175 tttcttccccctccccttctccttcttg 202 ||||| |||||| ||||||||||||||| Sbjct: 112314 tttctccccccttcccttctccttcttg 112287
>gb|AC159910.6| Mus musculus 10 BAC RP23-353C6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 219861 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 ttccccctccccttctccttcttg 202 |||||||| ||||||||||||||| Sbjct: 152926 ttcccccttcccttctccttcttg 152903
>ref|NM_079007.2| Drosophila melanogaster faint sausage CG17716-RA (fas), mRNA Length = 5944 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 tcctcctcctcgtcgtcgccgatg 44 |||||||||||||||||| ||||| Sbjct: 3157 tcctcctcctcgtcgtcgtcgatg 3134
>dbj|AK135246.1| Mus musculus 12 days embryo male wolffian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6720444N16 product:unclassifiable, full insert sequence Length = 1286 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 cttccccctccccttctccttctt 201 |||||||||| ||||||||||||| Sbjct: 386 cttccccctctccttctccttctt 363
>gb|AC006082.22| Mus musculus strain 129/Sv ES cell line CJ7 chromosome 16 clone ct7-342a4, complete sequence Length = 154201 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 tccccctccccttctccttc 199 |||||||||||||||||||| Sbjct: 60328 tccccctccccttctccttc 60309
>gb|AC019193.7| Homo sapiens BAC clone RP11-335L23 from 4, complete sequence Length = 177720 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 cttccccctccccttctccttctt 201 ||||||| |||||||||||||||| Sbjct: 34353 cttccccttccccttctccttctt 34376
>gb|AC008608.7| Homo sapiens chromosome 5 clone CTB-113I20, complete sequence Length = 160672 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 cttccccctccccttctccttctt 201 ||||||| |||||||||||||||| Sbjct: 114579 cttccccttccccttctccttctt 114602
>gb|AC087457.5| Homo sapiens chromosome 15, clone RP11-814P5, complete sequence Length = 141899 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 57 ctccgcgcgctcggccccggcctc 80 ||||||||||||||||| |||||| Sbjct: 58626 ctccgcgcgctcggccctggcctc 58603
>dbj|AK153145.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830125D01 product:N-acetyltransferase 5 (ARD1 homolog, S. cerevisiae), full insert sequence Length = 1045 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 tttctttctgaaatttcttc 181 |||||||||||||||||||| Sbjct: 389 tttctttctgaaatttcttc 370
>gb|AC022325.5| Homo sapiens BAC clone RP11-391J13 from 4, complete sequence Length = 193057 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 cttccccctccccttctccttctt 201 ||||||| |||||||||||||||| Sbjct: 85936 cttccccttccccttctccttctt 85959
>gb|BC083555.1| Rattus norvegicus baculoviral IAP repeat-containing 3, mRNA (cDNA clone MGC:93416 IMAGE:7112819), complete cds Length = 2341 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 cttccccctccccttctccttctt 201 ||||||||||||||| |||||||| Sbjct: 49 cttccccctccccttttccttctt 26
>gb|AC159327.8| Mus musculus 10 BAC RP23-207L3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 215004 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 cttccccctccccttctcct 197 |||||||||||||||||||| Sbjct: 177951 cttccccctccccttctcct 177970
>gb|AC008571.6| Homo sapiens chromosome 5 clone CTC-550M4, complete sequence Length = 214267 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 cttccccctccccttctcct 197 |||||||||||||||||||| Sbjct: 14140 cttccccctccccttctcct 14159
>gb|AF059571.1|AF059571 Drosophila melanogaster faint sausage (fas) mRNA, complete cds Length = 5926 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 21 tcctcctcctcgtcgtcgccgatg 44 |||||||||||||||||| ||||| Sbjct: 3157 tcctcctcctcgtcgtcgtcgatg 3134
>emb|CR405802.1| Gallus gallus finished cDNA, clone ChEST875e13 Length = 604 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 ccgtcctcctcctcgtcgtc 37 |||||||||||||||||||| Sbjct: 36 ccgtcctcctcctcgtcgtc 17
>gb|AC091387.2| Drosophila melanogaster, chromosome 2R, region 50C-50D, BAC clone BACR13P15, complete sequence Length = 171222 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 tcctcctcctcgtcgtcgccgatg 44 |||||||||||||||||| ||||| Sbjct: 69962 tcctcctcctcgtcgtcgtcgatg 69985
>dbj|AK032708.1| Mus musculus 12 days embryo male wolffian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6720407D17 product:hypothetical Glutamic acid-rich region/SAP domain containing protein, full insert sequence Length = 2690 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 cgtcctcctcctcgtcgtcg 38 |||||||||||||||||||| Sbjct: 267 cgtcctcctcctcgtcgtcg 248
>emb|BX930146.2| Gallus gallus finished cDNA, clone ChEST587b18 Length = 794 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 ccgtcctcctcctcgtcgtc 37 |||||||||||||||||||| Sbjct: 8 ccgtcctcctcctcgtcgtc 27
>gb|AC160338.2| Mus musculus BAC clone RP23-261O3 from chromosome 9, complete sequence Length = 167569 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 tcttccccctccccttctccttct 200 |||||||| ||||||||||||||| Sbjct: 147533 tcttccccttccccttctccttct 147556 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,822,650 Number of Sequences: 3902068 Number of extensions: 2822650 Number of successful extensions: 249554 Number of sequences better than 10.0: 361 Number of HSP's better than 10.0 without gapping: 368 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 243266 Number of HSP's gapped (non-prelim): 6267 length of query: 218 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 196 effective length of database: 17,147,199,772 effective search space: 3360851155312 effective search space used: 3360851155312 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
