>LEA34_GOSHI (P09444) Late embryogenesis abundant protein D-34 (LEA D-34)|
          Length = 264

 Score = 98.2 bits (243), Expect = 4e-21
 Identities = 55/105 (52%), Positives = 66/105 (62%)
 Frame = +3

Query: 96  MSQGQQRRPSSDXXXXXXXXXXXXXXXXXXVRYGDVFPAVAGGLAQKPVAPQDAATMQSA 275
           MSQGQ RRP                     ++YGDVF  V+G LA KP+APQDAA MQ+A
Sbjct: 1   MSQGQPRRPQQPAGQGENQEP---------IKYGDVFN-VSGELANKPIAPQDAAMMQTA 50

Query: 276 ENLVFGETIKGGPAATMQSAAMRNERMGVVGHDQATDATAEQGVS 410
           E  V G+T KGG AA MQ+AA RNE++GVVGH+  TD   EQGV+
Sbjct: 51  ETQVLGQTQKGGTAAVMQAAATRNEQVGVVGHNDITDIAGEQGVT 95



 Score = 37.7 bits (86), Expect = 0.007
 Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
 Frame = +3

Query: 186 VRYGDVFPAVAGGLAQKPVAPQDAATMQSAENLVFGET--IKGGPAATMQSAAMRN 347
           +  G+   A A     KPV   DAA +Q+AE    G    I GG AAT QSAA  N
Sbjct: 138 ITIGEALEATAKTAGDKPVDQSDAAAVQAAEVRATGSNVIIPGGLAATAQSAAAHN 193

>Y051_MYCTU (Q10880) Hypothetical protein Rv0083/MT0090|
          Length = 640

 Score = 31.2 bits (69), Expect = 0.61
 Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
 Frame = -2

Query: 403 PCSAVASVAWSWPTTPMRSFRMAAD-CMVAAGPPLMVSPNTRFSADCIVAASC---GATG 236
           P S  A  A   P +      +AA  C+V A  PL+V+P  R +A  + AA        G
Sbjct: 426 PRSTQAEAAREAPASMRAGMAIAAGACLVLAVAPLLVAPMVRRAAATLPAAQAVKFTGLG 485

Query: 235 FCARPPATAGNTSP 194
              R PA +G+ +P
Sbjct: 486 AVVRLPAMSGSIAP 499

>FBN3_HUMAN (Q75N90) Fibrillin-3 precursor|
          Length = 2809

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 16/44 (36%), Positives = 19/44 (43%)
 Frame = -2

Query: 370 WPTTPMRSFRMAADCMVAAGPPLMVSPNTRFSADCIVAASCGAT 239
           W T P RS  +   C  A G      PN    AD  +A SCG +
Sbjct: 72  WRTFPGRSQCVVPICRRACGEGFCSQPNLCTCADGTLAPSCGVS 115

>EFTS_BORGA (Q662P0) Elongation factor Ts (EF-Ts)|
          Length = 279

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = +3

Query: 240 VAPQDAATMQSAENLVFGETIKGGPAAT--MQSAAMRNERMGVVGHDQATDATAEQG 404
           ++PQD   ++   N  FG+  K   AA+   + A  +   MG+   ++  D  A++G
Sbjct: 4   ISPQDVKRLREETNAGFGDCKKALSAASGDFELAKKKLREMGIASAEKRLDRDAKEG 60

>PDC6I_MOUSE (Q9WU78) Programmed cell death 6-interacting protein|
           (ALG-2-interacting protein X) (ALG-2-interacting protein
           1) (E2F1-inducible protein) (Eig2)
          Length = 869

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 19/58 (32%), Positives = 20/58 (34%)
 Frame = -2

Query: 367 PTTPMRSFRMAADCMVAAGPPLMVSPNTRFSADCIVAASCGATGFCARPPATAGNTSP 194
           P TP       A     A PP  V P  R       AA  G     A PP T G+  P
Sbjct: 739 PPTPAPRTMPPAKPQPPARPPPPVLPANRVPPASAAAAPAGVGTASAAPPQTPGSAPP 796

>LPXD_BRUSU (P0A3P5) UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase|
           (EC 2.3.1.-)
          Length = 351

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 304 LMVSPNTRFSADCIVAASCGATGFC 230
           + ++ N R    C+VAA CG +G C
Sbjct: 253 VQIAHNVRIGRFCLVAAHCGISGSC 277

>LPXD_BRUME (P0A3P4) UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase|
           (EC 2.3.1.-)
          Length = 351

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 304 LMVSPNTRFSADCIVAASCGATGFC 230
           + ++ N R    C+VAA CG +G C
Sbjct: 253 VQIAHNVRIGRFCLVAAHCGISGSC 277

>LPXD_BRUAB (P0C111) UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase|
           (EC 2.3.1.-)
          Length = 351

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 304 LMVSPNTRFSADCIVAASCGATGFC 230
           + ++ N R    C+VAA CG +G C
Sbjct: 253 VQIAHNVRIGRFCLVAAHCGISGSC 277

>LPXD_BRUA2 (Q2YRQ3) UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase|
           (EC 2.3.1.-)
          Length = 351

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 304 LMVSPNTRFSADCIVAASCGATGFC 230
           + ++ N R    C+VAA CG +G C
Sbjct: 253 VQIAHNVRIGRFCLVAAHCGISGSC 277

>AMID_PSECL (P27765) Amidase (EC 3.5.1.4)|
          Length = 505

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 304 LMVSPNTRFSADCIVAASCGATGFCARPPATAGNTSP 194
           L+V P T  +A     A+C  T + AR     GNT+P
Sbjct: 418 LLVMPTTPITAQPHPPANCSITEYVARALEMIGNTAP 454

>TOPB1_MOUSE (Q6ZQF0) DNA topoisomerase II-binding protein 1 (DNA topoisomerase|
            IIbeta-binding protein 1) (TopBP1)
          Length = 1515

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +3

Query: 207  PAVAGGLAQKPVAPQDAATMQSAE 278
            PAVA  LA+ PVAPQ A  +++ E
Sbjct: 1231 PAVASPLAKPPVAPQPADKIETQE 1254

>DNAA_RALSO (Q8XTV4) Chromosomal replication initiator protein dnaA|
          Length = 522

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 8/51 (15%)
 Frame = +3

Query: 207 PAVAGGLAQKPVAPQDAATMQSA--------ENLVFGETIKGGPAATMQSA 335
           PAV GGL+  P AP D    + +        +NLV G+  +   AA +Q A
Sbjct: 163 PAVMGGLSAPPAAPVDDTVHERSRLNPILTFDNLVTGKANQLARAAAVQVA 213

>STC1_STAAU (P07767) Staphylocoagulase precursor|
          Length = 658

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = +3

Query: 222 GLAQKPVAPQDAATMQSAENLVFGETIKGGPAATMQSAAMRNE 350
           G A++   P     ++  +  ++GET+KG    TM++  ++ E
Sbjct: 339 GKAEETTQPVAQPLVKIPQETIYGETVKGPEYPTMENKTLQGE 381

>K1683_HUMAN (Q9H0B3) Protein KIAA1683|
          Length = 1180

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
 Frame = +3

Query: 219 GGLAQKPVA-PQDAATMQSAENLVFGETIKGGPA-ATMQSAAMRNERMGVVGH 371
           GGL+  P A P+D  T       V G+T +GGP  A  +   M    M   GH
Sbjct: 789 GGLSAPPWAKPEDRQTQPQPHGHVPGKTTQGGPCPAACEVQGMLVPPMAPTGH 841


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,832,646
Number of Sequences: 219361
Number of extensions: 473659
Number of successful extensions: 1661
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1659
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 1344132336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)