| Clone Name | bast01f01 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X59138.1|ZMR28DNA Z.mays rab28 gene Length = 1846 Score = 232 bits (117), Expect = 7e-58 Identities = 202/228 (88%), Gaps = 3/228 (1%) Strand = Plus / Plus Query: 180 ggcgccgtccgctacggcgacgtgttcccggccgtggccggcggcctcgcgcagaagccc 239 |||||||||||||||||||||||||||||||| ||| ||| ||||||||| |||||||| Sbjct: 557 ggcgccgtccgctacggcgacgtgttcccggcggtgagcgggggcctcgcggagaagccc 616 Query: 240 gtggcgccgcaggacgcggccacgatgcagtcggccgagaacctcgtgttcggggagacc 299 ||||||| ||||||| ||||||||||||||||| |||||||| |||||||| |||| Sbjct: 617 gtggcgc-gcaggacc--gccacgatgcagtcggcggagaacctggtgttcggccagacg 673 Query: 300 atcaagggcggaccggcggccaccatgcagtccgcggccatgcggaacgagcgcatgggc 359 |||||||||| |||||||| |||||||||||||||||| ||||||||||||||| Sbjct: 674 ctcaagggcggcccggcggcggccatgcagtccgcggccaccaccaacgagcgcatgggc 733 Query: 360 gtcgtcggccacgaccaggccacggacgccaccgccgagcagggcgtc 407 | |||||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 734 gccgtcgggcacgaccaggccacggacgccaccgccgtgcagggcgtc 781
>ref|XM_470268.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 831 Score = 141 bits (71), Expect = 2e-30 Identities = 178/213 (83%), Gaps = 3/213 (1%) Strand = Plus / Plus Query: 195 ggcgacgtgttcccggccgtggccggcggcctcgcgcagaagcccgtggcgccgcaggac 254 |||||||||||||||| || |||| |||||||| |||||| | || |||| |||| Sbjct: 76 ggcgacgtgttcccgg---tgaccggaagcctcgcggccaagcccatcgccccgcgggac 132 Query: 255 gcggccacgatgcagtcggccgagaacctcgtgttcggggagaccatcaagggcggaccg 314 ||||| |||||||||||||| |||||||||||| | ||| |||| |||||||||| || Sbjct: 133 gcggcgacgatgcagtcggcggagaacctcgtgctggggaagacggtcaagggcggcccc 192 Query: 315 gcggccaccatgcagtccgcggccatgcggaacgagcgcatgggcgtcgtcggccacgac 374 || ||| ||||| |||||||||| | || |||||| |||||||||||||| || ||| Sbjct: 193 gccgccgccatggagtccgcggcgagtcgtaacgaggagatgggcgtcgtcgggcatgac 252 Query: 375 caggccacggacgccaccgccgagcagggcgtc 407 ||||||||||||||| ||||||||||||||||| Sbjct: 253 caggccacggacgccgccgccgagcagggcgtc 285
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 141 bits (71), Expect = 2e-30 Identities = 178/213 (83%), Gaps = 3/213 (1%) Strand = Plus / Minus Query: 195 ggcgacgtgttcccggccgtggccggcggcctcgcgcagaagcccgtggcgccgcaggac 254 |||||||||||||||| || |||| |||||||| |||||| | || |||| |||| Sbjct: 3167466 ggcgacgtgttcccgg---tgaccggaagcctcgcggccaagcccatcgccccgcgggac 3167410 Query: 255 gcggccacgatgcagtcggccgagaacctcgtgttcggggagaccatcaagggcggaccg 314 ||||| |||||||||||||| |||||||||||| | ||| |||| |||||||||| || Sbjct: 3167409 gcggcgacgatgcagtcggcggagaacctcgtgctggggaagacggtcaagggcggcccc 3167350 Query: 315 gcggccaccatgcagtccgcggccatgcggaacgagcgcatgggcgtcgtcggccacgac 374 || ||| ||||| |||||||||| | || |||||| |||||||||||||| || ||| Sbjct: 3167349 gccgccgccatggagtccgcggcgagtcgtaacgaggagatgggcgtcgtcgggcatgac 3167290 Query: 375 caggccacggacgccaccgccgagcagggcgtc 407 ||||||||||||||| ||||||||||||||||| Sbjct: 3167289 caggccacggacgccgccgccgagcagggcgtc 3167257 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 96 atgagccaggggcagcagcggaggccgtcgtccgac 131 |||||||||||||||| | |||||||| || ||||| Sbjct: 30449305 atgagccaggggcagccgaggaggccgccgcccgac 30449270
>gb|AC099401.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1134F05, complete sequence Length = 101799 Score = 141 bits (71), Expect = 2e-30 Identities = 178/213 (83%), Gaps = 3/213 (1%) Strand = Plus / Minus Query: 195 ggcgacgtgttcccggccgtggccggcggcctcgcgcagaagcccgtggcgccgcaggac 254 |||||||||||||||| || |||| |||||||| |||||| | || |||| |||| Sbjct: 90479 ggcgacgtgttcccgg---tgaccggaagcctcgcggccaagcccatcgccccgcgggac 90423 Query: 255 gcggccacgatgcagtcggccgagaacctcgtgttcggggagaccatcaagggcggaccg 314 ||||| |||||||||||||| |||||||||||| | ||| |||| |||||||||| || Sbjct: 90422 gcggcgacgatgcagtcggcggagaacctcgtgctggggaagacggtcaagggcggcccc 90363 Query: 315 gcggccaccatgcagtccgcggccatgcggaacgagcgcatgggcgtcgtcggccacgac 374 || ||| ||||| |||||||||| | || |||||| |||||||||||||| || ||| Sbjct: 90362 gccgccgccatggagtccgcggcgagtcgtaacgaggagatgggcgtcgtcgggcatgac 90303 Query: 375 caggccacggacgccaccgccgagcagggcgtc 407 ||||||||||||||| ||||||||||||||||| Sbjct: 90302 caggccacggacgccgccgccgagcagggcgtc 90270
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 141 bits (71), Expect = 2e-30 Identities = 178/213 (83%), Gaps = 3/213 (1%) Strand = Plus / Minus Query: 195 ggcgacgtgttcccggccgtggccggcggcctcgcgcagaagcccgtggcgccgcaggac 254 |||||||||||||||| || |||| |||||||| |||||| | || |||| |||| Sbjct: 3167577 ggcgacgtgttcccgg---tgaccggaagcctcgcggccaagcccatcgccccgcgggac 3167521 Query: 255 gcggccacgatgcagtcggccgagaacctcgtgttcggggagaccatcaagggcggaccg 314 ||||| |||||||||||||| |||||||||||| | ||| |||| |||||||||| || Sbjct: 3167520 gcggcgacgatgcagtcggcggagaacctcgtgctggggaagacggtcaagggcggcccc 3167461 Query: 315 gcggccaccatgcagtccgcggccatgcggaacgagcgcatgggcgtcgtcggccacgac 374 || ||| ||||| |||||||||| | || |||||| |||||||||||||| || ||| Sbjct: 3167460 gccgccgccatggagtccgcggcgagtcgtaacgaggagatgggcgtcgtcgggcatgac 3167401 Query: 375 caggccacggacgccaccgccgagcagggcgtc 407 ||||||||||||||| ||||||||||||||||| Sbjct: 3167400 caggccacggacgccgccgccgagcagggcgtc 3167368 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 96 atgagccaggggcagcagcggaggccgtcgtccgac 131 |||||||||||||||| | |||||||| || ||||| Sbjct: 30540727 atgagccaggggcagccgaggaggccgccgcccgac 30540692
>dbj|AK106743.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-B06, full insert sequence Length = 1270 Score = 141 bits (71), Expect = 2e-30 Identities = 178/213 (83%), Gaps = 3/213 (1%) Strand = Plus / Plus Query: 195 ggcgacgtgttcccggccgtggccggcggcctcgcgcagaagcccgtggcgccgcaggac 254 |||||||||||||||| || |||| |||||||| |||||| | || |||| |||| Sbjct: 147 ggcgacgtgttcccgg---tgaccggaagcctcgcggccaagcccatcgccccgcgggac 203 Query: 255 gcggccacgatgcagtcggccgagaacctcgtgttcggggagaccatcaagggcggaccg 314 ||||| |||||||||||||| |||||||||||| | ||| |||| |||||||||| || Sbjct: 204 gcggcgacgatgcagtcggcggagaacctcgtgctggggaagacggtcaagggcggcccc 263 Query: 315 gcggccaccatgcagtccgcggccatgcggaacgagcgcatgggcgtcgtcggccacgac 374 || ||| ||||| |||||||||| | || |||||| |||||||||||||| || ||| Sbjct: 264 gccgccgccatggagtccgcggcgagtcgtaacgaggagatgggcgtcgtcgggcatgac 323 Query: 375 caggccacggacgccaccgccgagcagggcgtc 407 ||||||||||||||| ||||||||||||||||| Sbjct: 324 caggccacggacgccgccgccgagcagggcgtc 356
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 121 bits (61), Expect = 2e-24 Identities = 133/157 (84%) Strand = Plus / Plus Query: 251 ggacgcggccacgatgcagtcggccgagaacctcgtgttcggggagaccatcaagggcgg 310 ||||||||| |||||||||||||| |||||||||||||| ||| |||| |||||||||| Sbjct: 17487627 ggacgcggcgacgatgcagtcggcggagaacctcgtgttggggaagacggtcaagggcgg 17487686 Query: 311 accggcggccaccatgcagtccgcggccatgcggaacgagcgcatgggcgtcgtcggcca 370 ||||| ||| ||||| |||||||| | | || |||||| ||||||||| |||| || Sbjct: 17487687 cccggccgccgccatggagtccgcgacgagtcgtaacgaggagatgggcgtcatcggtca 17487746 Query: 371 cgaccaggccacggacgccaccgccgagcagggcgtc 407 |||||| |||||||||||||||| ||||| |||||| Sbjct: 17487747 tgaccagtccacggacgccaccgctgagcatggcgtc 17487783 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 cgggcggtggcggcgggcagg 162 ||||||||||||||||||||| Sbjct: 324408 cgggcggtggcggcgggcagg 324428
>dbj|AP005755.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0019B14 Length = 127570 Score = 121 bits (61), Expect = 2e-24 Identities = 133/157 (84%) Strand = Plus / Plus Query: 251 ggacgcggccacgatgcagtcggccgagaacctcgtgttcggggagaccatcaagggcgg 310 ||||||||| |||||||||||||| |||||||||||||| ||| |||| |||||||||| Sbjct: 51805 ggacgcggcgacgatgcagtcggcggagaacctcgtgttggggaagacggtcaagggcgg 51864 Query: 311 accggcggccaccatgcagtccgcggccatgcggaacgagcgcatgggcgtcgtcggcca 370 ||||| ||| ||||| |||||||| | | || |||||| ||||||||| |||| || Sbjct: 51865 cccggccgccgccatggagtccgcgacgagtcgtaacgaggagatgggcgtcatcggtca 51924 Query: 371 cgaccaggccacggacgccaccgccgagcagggcgtc 407 |||||| |||||||||||||||| ||||| |||||| Sbjct: 51925 tgaccagtccacggacgccaccgctgagcatggcgtc 51961
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 103 bits (52), Expect = 4e-19 Identities = 112/132 (84%) Strand = Plus / Minus Query: 276 gagaacctcgtgttcggggagaccatcaagggcggaccggcggccaccatgcagtccgcg 335 |||||||||||||| ||| |||| |||||||||| ||||| ||| ||||| |||||||| Sbjct: 16895022 gagaacctcgtgttggggaagacggtcaagggcggcccggccgccgccatggagtccgcg 16894963 Query: 336 gccatgcggaacgagcgcatgggcgtcgtcggccacgaccaggccacggacgccaccgcc 395 || | || |||||| ||||||||| |||| || |||||| ||||||||||||||||| Sbjct: 16894962 gcgagtcgtaacgaggagatgggcgtcatcggacatgaccagtccacggacgccaccgcc 16894903 Query: 396 gagcagggcgtc 407 ||||| |||||| Sbjct: 16894902 gagcatggcgtc 16894891 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 143 gggcggtggcggcgggcagggcca 166 |||||||||||||| ||||||||| Sbjct: 3975343 gggcggtggcggcgcgcagggcca 3975320 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 ggcgggcggtggcggcgggc 159 |||||||||||||||||||| Sbjct: 3695445 ggcgggcggtggcggcgggc 3695426
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 103 bits (52), Expect = 4e-19 Identities = 112/132 (84%) Strand = Plus / Minus Query: 276 gagaacctcgtgttcggggagaccatcaagggcggaccggcggccaccatgcagtccgcg 335 |||||||||||||| ||| |||| |||||||||| ||||| ||| ||||| |||||||| Sbjct: 16848255 gagaacctcgtgttggggaagacggtcaagggcggcccggccgccgccatggagtccgcg 16848196 Query: 336 gccatgcggaacgagcgcatgggcgtcgtcggccacgaccaggccacggacgccaccgcc 395 || | || |||||| ||||||||| |||| || |||||| ||||||||||||||||| Sbjct: 16848195 gcgagtcgtaacgaggagatgggcgtcatcggacatgaccagtccacggacgccaccgcc 16848136 Query: 396 gagcagggcgtc 407 ||||| |||||| Sbjct: 16848135 gagcatggcgtc 16848124 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 143 gggcggtggcggcgggcagggcca 166 |||||||||||||| ||||||||| Sbjct: 3975319 gggcggtggcggcgcgcagggcca 3975296 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 ggcgggcggtggcggcgggc 159 |||||||||||||||||||| Sbjct: 3695419 ggcgggcggtggcggcgggc 3695400
>emb|AL732639.5|CNS08C9E Oryza sativa chromosome 12, . BAC OSJNBa0038H18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 150238 Score = 103 bits (52), Expect = 4e-19 Identities = 112/132 (84%) Strand = Plus / Minus Query: 276 gagaacctcgtgttcggggagaccatcaagggcggaccggcggccaccatgcagtccgcg 335 |||||||||||||| ||| |||| |||||||||| ||||| ||| ||||| |||||||| Sbjct: 17065 gagaacctcgtgttggggaagacggtcaagggcggcccggccgccgccatggagtccgcg 17006 Query: 336 gccatgcggaacgagcgcatgggcgtcgtcggccacgaccaggccacggacgccaccgcc 395 || | || |||||| ||||||||| |||| || |||||| ||||||||||||||||| Sbjct: 17005 gcgagtcgtaacgaggagatgggcgtcatcggacatgaccagtccacggacgccaccgcc 16946 Query: 396 gagcagggcgtc 407 ||||| |||||| Sbjct: 16945 gagcatggcgtc 16934
>emb|AL831804.5|CNS08CAH Oryza sativa chromosome 12, . BAC OSJNBb0027C15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 115632 Score = 103 bits (52), Expect = 4e-19 Identities = 112/132 (84%) Strand = Plus / Minus Query: 276 gagaacctcgtgttcggggagaccatcaagggcggaccggcggccaccatgcagtccgcg 335 |||||||||||||| ||| |||| |||||||||| ||||| ||| ||||| |||||||| Sbjct: 106904 gagaacctcgtgttggggaagacggtcaagggcggcccggccgccgccatggagtccgcg 106845 Query: 336 gccatgcggaacgagcgcatgggcgtcgtcggccacgaccaggccacggacgccaccgcc 395 || | || |||||| ||||||||| |||| || |||||| ||||||||||||||||| Sbjct: 106844 gcgagtcgtaacgaggagatgggcgtcatcggacatgaccagtccacggacgccaccgcc 106785 Query: 396 gagcagggcgtc 407 ||||| |||||| Sbjct: 106784 gagcatggcgtc 106773
>gb|AC109929.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0093J03, complete sequence Length = 200626 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 252 gacgcggccacgatgcagtcggccgagaacctcgtg 287 |||||||| |||||||||||||| |||||||||||| Sbjct: 11402 gacgcggcgacgatgcagtcggcggagaacctcgtg 11367
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 252 gacgcggccacgatgcagtcggccgagaacctcgtg 287 |||||||| |||||||||||||| |||||||||||| Sbjct: 20704341 gacgcggcgacgatgcagtcggcggagaacctcgtg 20704306 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 caggcgggcggtggcggcgggcag 161 ||||||||||| |||||||||||| Sbjct: 14379021 caggcgggcggcggcggcgggcag 14378998
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 56.0 bits (28), Expect = 9e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 252 gacgcggccacgatgcagtcggccgagaacctcgtg 287 |||||||| |||||||||||||| |||||||||||| Sbjct: 21014576 gacgcggcgacgatgcagtcggcggagaacctcgtg 21014541 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ggcggcgggcagggccaggg 169 |||||||||||||||||||| Sbjct: 15610067 ggcggcgggcagggccaggg 15610048 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 caggcgggcggtggcggcgggcag 161 ||||||||||| |||||||||||| Sbjct: 14461023 caggcgggcggcggcggcgggcag 14461000
>ref|XM_462778.1| Oryza sativa (japonica cultivar-group), mRNA Length = 207 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 140 ggcgggcggtggcggcgggcagg 162 ||||||||||||||||||||||| Sbjct: 33 ggcgggcggtggcggcgggcagg 55
>tpg|BK000842.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M209, complete sequence Length = 1208 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 140 ggcgggcggtggcggcgggcagg 162 ||||||||||||||||||||||| Sbjct: 573 ggcgggcggtggcggcgggcagg 595
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 140 ggcgggcggtggcggcgggcagg 162 ||||||||||||||||||||||| Sbjct: 2493387 ggcgggcggtggcggcgggcagg 2493409
>dbj|AP002872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0416D03 Length = 157112 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Plus Query: 140 ggcgggcggtggcggcgggcagg 162 ||||||||||||||||||||||| Sbjct: 47808 ggcgggcggtggcggcgggcagg 47830
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 46.1 bits (23), Expect = 0.089 Identities = 23/23 (100%) Strand = Plus / Minus Query: 142 cgggcggtggcggcgggcagggc 164 ||||||||||||||||||||||| Sbjct: 868132 cgggcggtggcggcgggcagggc 868110
>ref|XM_514361.1| PREDICTED: Pan troglodytes similar to phosphoinositide-3-kinase, catalytic, delta polypeptide; phosphatidylinositol 3-kinase, catalytic, delta polypeptide (LOC457922), mRNA Length = 2330 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 232 agaagcccgtggcgccgcagga 253 |||||||||||||||||||||| Sbjct: 831 agaagcccgtggcgccgcagga 810
>gb|AC183432.1| Ornithorhynchus anatinus BAC clone OABb-35B8 from chromosome unknown, complete sequence Length = 142253 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 150 ggcggcgggcagggccaggggcaggg 175 |||||||||||||| ||||||||||| Sbjct: 68924 ggcggcgggcaggggcaggggcaggg 68949
>emb|AL691449.21| Human DNA sequence from clone RP11-558F24 on chromosome 1 Contains two novel genes, a ribosomal protein L26-like 1 pseudogene (RPL26L1), the PIK3CD gene for phosphoinositide-3-kinase, catalytic, delta polypeptide, the 3' end of the CLSTN1 gene for calsyntenin 1 and a CpG island, complete sequence Length = 163934 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 232 agaagcccgtggcgccgcagga 253 |||||||||||||||||||||| Sbjct: 91658 agaagcccgtggcgccgcagga 91637
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 212 cgtggccggcggcctcgcgcagaagc 237 |||||||||||||||||||| ||||| Sbjct: 847272 cgtggccggcggcctcgcgccgaagc 847297
>ref|NM_005026.2| Homo sapiens phosphoinositide-3-kinase, catalytic, delta polypeptide (PIK3CD), mRNA Length = 5220 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 232 agaagcccgtggcgccgcagga 253 |||||||||||||||||||||| Sbjct: 3113 agaagcccgtggcgccgcagga 3092
>emb|Y10055.2|HSP110DEL Homo sapiens mRNA for phosphoinositide 3-kinase Length = 3868 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 232 agaagcccgtggcgccgcagga 253 |||||||||||||||||||||| Sbjct: 3114 agaagcccgtggcgccgcagga 3093
>gb|DQ263596.1| Homo sapiens phosphoinositide-3-kinase D mRNA, complete cds Length = 3914 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 232 agaagcccgtggcgccgcagga 253 |||||||||||||||||||||| Sbjct: 2918 agaagcccgtggcgccgcagga 2897
>gb|DQ263595.1| Homo sapiens phosphoinositide-3-kinase C mRNA, complete cds Length = 3914 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 232 agaagcccgtggcgccgcagga 253 |||||||||||||||||||||| Sbjct: 2918 agaagcccgtggcgccgcagga 2897
>gb|DQ263594.1| Homo sapiens phosphoinositide-3-kinase B mRNA, complete cds Length = 3914 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 232 agaagcccgtggcgccgcagga 253 |||||||||||||||||||||| Sbjct: 2918 agaagcccgtggcgccgcagga 2897
>gb|AC021021.9| Homo sapiens BAC clone RP11-557N1 from 2, complete sequence Length = 169202 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 232 agaagcccgtggcgccgcagga 253 |||||||||||||||||||||| Sbjct: 72657 agaagcccgtggcgccgcagga 72678
>gb|AC020763.6| Homo sapiens chromosome 16 clone RP11-394B2, complete sequence Length = 200838 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 159 cagggccaggggcagggaggag 180 |||||||||||||||||||||| Sbjct: 95933 cagggccaggggcagggaggag 95954
>gb|AC012076.5| Homo sapiens BAC clone RP11-497D24 from 2, complete sequence Length = 212275 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 160 agggccaggggcagggaggagg 181 |||||||||||||||||||||| Sbjct: 200007 agggccaggggcagggaggagg 200028
>gb|U86453.1|HSU86453 Human phosphatidylinositol 3-kinase catalytic subunit p110delta mRNA, complete cds Length = 5220 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 232 agaagcccgtggcgccgcagga 253 |||||||||||||||||||||| Sbjct: 3113 agaagcccgtggcgccgcagga 3092
>gb|U57843.1|HSU57843 Human phosphatidylinositol 3-kinase delta catalytic subunit mRNA, complete cds Length = 3525 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 232 agaagcccgtggcgccgcagga 253 |||||||||||||||||||||| Sbjct: 3105 agaagcccgtggcgccgcagga 3084
>dbj|AB208835.1| Homo sapiens mRNA for phosphoinositide-3-kinase, catalytic, delta polypeptide variant protein Length = 4411 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 232 agaagcccgtggcgccgcagga 253 |||||||||||||||||||||| Sbjct: 2321 agaagcccgtggcgccgcagga 2300
>ref|XM_988352.1| PREDICTED: Mus musculus phosphogluconate dehydrogenase, transcript variant 3 (Pgd), mRNA Length = 2576 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 155 cgggcagggccaggggcaggg 175 ||||||||||||||||||||| Sbjct: 254 cgggcagggccaggggcaggg 274
>ref|XM_001002937.1| PREDICTED: Mus musculus phosphogluconate dehydrogenase, transcript variant 9 (Pgd), mRNA Length = 2580 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 155 cgggcagggccaggggcaggg 175 ||||||||||||||||||||| Sbjct: 254 cgggcagggccaggggcaggg 274
>ref|XM_001003312.1| PREDICTED: Mus musculus phosphogluconate dehydrogenase, transcript variant 4 (Pgd), mRNA Length = 2576 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 155 cgggcagggccaggggcaggg 175 ||||||||||||||||||||| Sbjct: 254 cgggcagggccaggggcaggg 274
>ref|XM_844080.1| PREDICTED: Canis familiaris similar to fibrosin 1 (LOC607426), mRNA Length = 2529 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 128 cgaccaagcccaggcgggcggtggcggcg 156 ||||||||||| |||| |||||||||||| Sbjct: 309 cgaccaagccctggcgtgcggtggcggcg 281
>gb|AF345444.1| Rattus norvegicus potassium channel beta subunit KChIP4 mRNA, complete cds Length = 1289 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 ggcggtggcggcgggcagggc 164 ||||||||||||||||||||| Sbjct: 245 ggcggtggcggcgggcagggc 225
>ref|XM_862733.1| PREDICTED: Canis familiaris similar to sorting nexin associated golgi protein 1, transcript variant 3 (LOC610530), mRNA Length = 3314 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 151 gcggcgggcagggccaggggcaggg 175 ||||||||||||| ||||||||||| Sbjct: 329 gcggcgggcaggggcaggggcaggg 305
>ref|XM_848613.1| PREDICTED: Canis familiaris similar to sorting nexin associated golgi protein 1, transcript variant 1 (LOC610530), mRNA Length = 3347 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 151 gcggcgggcagggccaggggcaggg 175 ||||||||||||| ||||||||||| Sbjct: 329 gcggcgggcaggggcaggggcaggg 305
>ref|NM_181365.2| Rattus norvegicus Kv channel interacting protein 4 (Kcnip4), mRNA Length = 1289 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 144 ggcggtggcggcgggcagggc 164 ||||||||||||||||||||| Sbjct: 245 ggcggtggcggcgggcagggc 225
>emb|AL136301.21| Human DNA sequence from clone RP11-195L15 on chromosome 13 Contains the 5' end of the KPNA3 gene for karyopherin alpha 3 (importin alpha 4), a novel gene and two CpG islands, complete sequence Length = 48730 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 135 gcccaggcgggcggtggcggc 155 ||||||||||||||||||||| Sbjct: 45940 gcccaggcgggcggtggcggc 45920
>gb|AC155318.2| Ornithorhynchus anatinus chromosome UNK clone OABb-158A1, complete sequence Length = 163918 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 137 ccaggcgggcggtggcggcgggcag 161 |||||||||| |||||||||||||| Sbjct: 63778 ccaggcgggcagtggcggcgggcag 63802
>dbj|AK075616.1| Mus musculus adult male heart cDNA, RIKEN full-length enriched library, clone:1010001I23 product:sphingomyelin phosphodiesterase 2, neutral, full insert sequence Length = 1604 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 216 gccggcggcctcgcgcagaagcccg 240 |||||||||||||||||| |||||| Sbjct: 121 gccggcggcctcgcgcagcagcccg 145
>dbj|AP006505.1| Mus musculus genomic DNA, chromosome 4, clone: RP23-266A3, complete sequence Length = 199759 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 155 cgggcagggccaggggcaggg 175 ||||||||||||||||||||| Sbjct: 71195 cgggcagggccaggggcaggg 71215
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 149 tggcggcgggcagggccaggggcag 173 |||||||||||||||| |||||||| Sbjct: 8835409 tggcggcgggcagggcgaggggcag 8835385
>dbj|AP006061.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0414D03 Length = 169823 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 142 cgggcggtggcggcgggcagg 162 ||||||||||||||||||||| Sbjct: 73007 cgggcggtggcggcgggcagg 73027
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 358 gcgtcgtcggccacgaccagg 378 ||||||||||||||||||||| Sbjct: 2011550 gcgtcgtcggccacgaccagg 2011570
>emb|AJ240681.1|GGA240681 Gallus gallus DNA for LEI0334 SSCP marker Length = 297 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 cagggccaggggcagggagga 179 ||||||||||||||||||||| Sbjct: 172 cagggccaggggcagggagga 192
>gb|AC162179.2| Mus musculus BAC clone RP23-197K11 from chromosome 9, complete sequence Length = 210741 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 154 gcgggcagggccaggggcagggaggaggc 182 |||||||||||||||||| ||||| |||| Sbjct: 172910 gcgggcagggccaggggctgggagcaggc 172938
>emb|AL731655.8| Mouse DNA sequence from clone RP23-249G3 on chromosome 4, complete sequence Length = 126753 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 cgggcagggccaggggcaggg 175 ||||||||||||||||||||| Sbjct: 46220 cgggcagggccaggggcaggg 46200
>ref|XM_469733.1| Oryza sativa (japonica cultivar-group), mRNA Length = 765 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 96 atgagccaggggcagcagcggaggccgtcgtccgac 131 |||||||||||||||| | |||||||| || ||||| Sbjct: 1 atgagccaggggcagccgaggaggccgccgcccgac 36
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 ggcgggcggtggcggcgggc 159 |||||||||||||||||||| Sbjct: 2230845 ggcgggcggtggcggcgggc 2230864
>gb|AC146522.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0039A07 map near 50283S, complete sequence Length = 158158 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 caggcgggcggtggcggcgggcag 161 ||||||||||| |||||||||||| Sbjct: 124633 caggcgggcggcggcggcgggcag 124610
>gb|AC137586.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0054A16, complete sequence Length = 164605 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ggcggcgggcagggccaggg 169 |||||||||||||||||||| Sbjct: 140930 ggcggcgggcagggccaggg 140911
>gb|AC135512.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0057M06, complete sequence Length = 147673 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 ggcggcgggcagggccaggg 169 |||||||||||||||||||| Sbjct: 27958 ggcggcgggcagggccaggg 27939
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 tcaagggcggaccggcggcc 320 |||||||||||||||||||| Sbjct: 4178914 tcaagggcggaccggcggcc 4178895 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggcggtggcggcgggcaggg 163 |||||||||||||||||||| Sbjct: 927073 ggcggtggcggcgggcaggg 927092
>ref|NM_008242.1| Mus musculus forkhead box D1 (Foxd1), mRNA Length = 2437 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 caggcgggcggtggcggcgg 157 |||||||||||||||||||| Sbjct: 1171 caggcgggcggtggcggcgg 1152
>ref|XM_593444.2| PREDICTED: Bos taurus solute carrier family 1 (glutamate/neutral amino acid transporter), member 4 (SLC1A4), mRNA Length = 2508 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 aagcccgtggcgccgcagga 253 |||||||||||||||||||| Sbjct: 132 aagcccgtggcgccgcagga 113
>emb|CT009550.5| Mouse DNA sequence from clone RP23-38F20 on chromosome 14, complete sequence Length = 229049 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 gggcagggccaggggcaggg 175 |||||||||||||||||||| Sbjct: 110658 gggcagggccaggggcaggg 110677
>gb|AC125460.4| Mus musculus BAC clone RP24-448D10 from chromosome 15, complete sequence Length = 205859 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 gggcagggccaggggcaggg 175 |||||||||||||||||||| Sbjct: 149231 gggcagggccaggggcaggg 149250
>gb|AC129599.3| Mus musculus BAC clone RP23-349A5 from chromosome 8, complete sequence Length = 188426 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 gggcagggccaggggcaggg 175 |||||||||||||||||||| Sbjct: 7321 gggcagggccaggggcaggg 7302 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 gggcagggccaggggcaggg 175 |||||||||||||||||||| Sbjct: 7309 gggcagggccaggggcaggg 7290
>emb|AL591784.1|SME591784 Sinorhizobium meliloti 1021 complete chromosome; segment 3/12 Length = 300000 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 cgagcgcatgggcgtcgtcg 366 |||||||||||||||||||| Sbjct: 256506 cgagcgcatgggcgtcgtcg 256487
>gb|AC121839.3| Mus musculus BAC clone RP24-76E2 from chromosome 13, complete sequence Length = 182835 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 caggcgggcggtggcggcgg 157 |||||||||||||||||||| Sbjct: 77230 caggcgggcggtggcggcgg 77211
>gb|AC116588.3| Mus musculus BAC clone RP23-448E6 from 9, complete sequence Length = 189927 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 156 gggcagggccaggggcagggagga 179 |||||||| ||||||||||||||| Sbjct: 121784 gggcaggggcaggggcagggagga 121761
>gb|AC117624.10| Mus musculus chromosome 8, clone RP23-114M9, complete sequence Length = 207159 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 gggcagggccaggggcaggg 175 |||||||||||||||||||| Sbjct: 110193 gggcagggccaggggcaggg 110174
>gb|AC100736.5| Mus musculus chromosome 15, clone RP24-336O6, complete sequence Length = 247275 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 gggcagggccaggggcaggg 175 |||||||||||||||||||| Sbjct: 243609 gggcagggccaggggcaggg 243590
>emb|AL354671.27| Human DNA sequence from clone RP11-611D20 on chromosome 9 Contains two novel genes, the 5' end of the NOTCH1 gene for Notch homolog 1 translocation-associated (Drosophila) and a CpG island, complete sequence Length = 33110 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 cggccacgaccaggccacgg 384 |||||||||||||||||||| Sbjct: 14068 cggccacgaccaggccacgg 14087
>emb|AL034380.26|HS50O24 Human DNA sequence from clone RP1-50O24 on chromosome 1p35.1-35.3 Contains the 3' end of the SMARCF1 gene for SWI/SNF related, matrix associated, actin dependent regulator of chromatin (subfamily f, member 1), a novel gene (FLJ20477), the ZDHHC18 gene for zinc finger, DHHC domain containing 18, the SFN gene for stratifin, two novel genes, a novel gene (FLJ10349), the 3' end of a novel gene (FLJ12455) and two CpG islands, complete sequence Length = 157435 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 ggcgggcggtggcggcgggc 159 |||||||||||||||||||| Sbjct: 69593 ggcgggcggtggcggcgggc 69574
>emb|BX842584.1| Mycobacterium tuberculosis H37Rv complete genome; segment 13/13 Length = 244800 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 tcaagggcggaccggcggcc 320 |||||||||||||||||||| Sbjct: 19869 tcaagggcggaccggcggcc 19850
>emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome; segment 3/13 Length = 349564 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggcggtggcggcgggcaggg 163 |||||||||||||||||||| Sbjct: 242891 ggcggtggcggcgggcaggg 242910
>emb|BX248347.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 14/14 Length = 278492 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 tcaagggcggaccggcggcc 320 |||||||||||||||||||| Sbjct: 57061 tcaagggcggaccggcggcc 57042
>emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 3/14 Length = 320050 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggcggtggcggcgggcaggg 163 |||||||||||||||||||| Sbjct: 261078 ggcggtggcggcgggcaggg 261097
>emb|AJ400877.1|HSA400877 Homo sapiens ASCL3 gene, CEGP1 gene, C11orf14 gene, C11orf15 gene, C11orf16 gene and C11orf17 gene Length = 256164 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 gccaggggcagggaggaggc 182 |||||||||||||||||||| Sbjct: 33843 gccaggggcagggaggaggc 33824
>gb|AC153982.8| Mus musculus 6 BAC RP24-280G3 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 163461 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 gggcagggccaggggcaggg 175 |||||||||||||||||||| Sbjct: 73628 gggcagggccaggggcaggg 73647
>gb|AC087852.11| Oryza sativa chromosome 3 BAC OJ1124_H03 genomic sequence, complete sequence Length = 149380 Score = 40.1 bits (20), Expect = 5.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 96 atgagccaggggcagcagcggaggccgtcgtccgac 131 |||||||||||||||| | |||||||| || ||||| Sbjct: 27710 atgagccaggggcagccgaggaggccgccgcccgac 27745
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 gggcggtggcggcgggcagg 162 |||||||||||||||||||| Sbjct: 4123595 gggcggtggcggcgggcagg 4123614 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggcggtggcggcgggcaggg 163 |||||||||||||||||||| Sbjct: 473871 ggcggtggcggcgggcaggg 473890
>dbj|AK142034.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230009L10 product:forkhead box D1, full insert sequence Length = 2839 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 caggcgggcggtggcggcgg 157 |||||||||||||||||||| Sbjct: 1185 caggcgggcggtggcggcgg 1166
>dbj|AK132390.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:4122401E09 product:forkhead box D1, full insert sequence Length = 2445 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 caggcgggcggtggcggcgg 157 |||||||||||||||||||| Sbjct: 1181 caggcgggcggtggcggcgg 1162
>gb|AC004873.3| Homo sapiens PAC clone RP4-742P4 from 1, complete sequence Length = 131329 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 ggcgggcggtggcggcgggc 159 |||||||||||||||||||| Sbjct: 12707 ggcgggcggtggcggcgggc 12726
>dbj|AK164408.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230010K09 product:forkhead box D1, full insert sequence Length = 2461 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 caggcgggcggtggcggcgg 157 |||||||||||||||||||| Sbjct: 1185 caggcgggcggtggcggcgg 1166
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 gcggtggcggcgggcagggc 164 |||||||||||||||||||| Sbjct: 3584633 gcggtggcggcgggcagggc 3584614
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 gcccaggcgggcggtggcgg 154 |||||||||||||||||||| Sbjct: 219802 gcccaggcgggcggtggcgg 219821
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 aggcgggcggtggcggcggg 158 |||||||||||||||||||| Sbjct: 30063757 aggcgggcggtggcggcggg 30063738 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 ggcgggcggtggcggcgggc 159 |||||||||||||||||||| Sbjct: 4240480 ggcgggcggtggcggcgggc 4240461
>gb|AC079296.5| Homo sapiens chromosome 11, clone RP11-467K18, complete sequence Length = 194686 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 gccaggggcagggaggaggc 182 |||||||||||||||||||| Sbjct: 104411 gccaggggcagggaggaggc 104392
>gb|AC078797.20| Homo sapiens 3 BAC RP11-125E8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 166704 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 ggcggtggcggcgggcaggg 163 |||||||||||||||||||| Sbjct: 56472 ggcggtggcggcgggcaggg 56491
>dbj|AP005113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0685G12 Length = 149155 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 aggcgggcggtggcggcggg 158 |||||||||||||||||||| Sbjct: 43354 aggcgggcggtggcggcggg 43335
>dbj|AP004838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0504A05 Length = 148360 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 ggcgggcggtggcggcgggc 159 |||||||||||||||||||| Sbjct: 57294 ggcgggcggtggcggcgggc 57275
>emb|AL670413.19| Mouse DNA sequence from clone RP23-298E4 on chromosome 4, complete sequence Length = 243792 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 cagggccaggggcagggaggaggc 182 ||||||||||| |||||||||||| Sbjct: 99563 cagggccagggtcagggaggaggc 99586
>ref|NM_211469.1| Eremothecium gossypii AGL260Wp (AGL260W), mRNA Length = 1542 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 gcccaggcgggcggtggcgg 154 |||||||||||||||||||| Sbjct: 129 gcccaggcgggcggtggcgg 148
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 cggcggcctcgcgcagaagc 237 |||||||||||||||||||| Sbjct: 843906 cggcggcctcgcgcagaagc 843925
>emb|CT737399.2| Pan troglodytes chromosome X clone CH251-213G08 map Xq28, complete sequence Length = 144757 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ggccaggggcagggaggagg 181 |||||||||||||||||||| Sbjct: 141901 ggccaggggcagggaggagg 141920
>gb|L38607.1|MUSBF2TF Mus musculus (clones 1 and 5) transcription factor (BF-2) mRNA, complete cds Length = 2437 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 caggcgggcggtggcggcgg 157 |||||||||||||||||||| Sbjct: 1171 caggcgggcggtggcggcgg 1152
>emb|AL713933.6|CNS07YPE Oryza sativa chromosome 12, . BAC OJ1041_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104421 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 140 ggcgggcggtggcggcgggc 159 |||||||||||||||||||| Sbjct: 54228 ggcgggcggtggcggcgggc 54247
>emb|AL731882.2|CNS08C8M Oryza sativa chromosome 12, . BAC OSJNBb0028H07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132682 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 143 gggcggtggcggcgggcagggcca 166 |||||||||||||| ||||||||| Sbjct: 11753 gggcggtggcggcgcgcagggcca 11730
>emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa0086B10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152090 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 143 gggcggtggcggcgggcagggcca 166 |||||||||||||| ||||||||| Sbjct: 137319 gggcggtggcggcgcgcagggcca 137296
>gb|AC130213.3| Mus musculus BAC clone RP24-68J20 from 8, complete sequence Length = 188287 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 gggcagggccaggggcaggg 175 |||||||||||||||||||| Sbjct: 122285 gggcagggccaggggcaggg 122266 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 gggcagggccaggggcaggg 175 |||||||||||||||||||| Sbjct: 122273 gggcagggccaggggcaggg 122254
>ref|NG_000002.1| Homo sapiens immunoglobulin lambda locus (IGL@) on chromosome 22 Length = 909203 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 gggcagggccaggggcaggg 175 |||||||||||||||||||| Sbjct: 271261 gggcagggccaggggcaggg 271280 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 gggcagggccaggggcaggg 175 |||||||||||||||||||| Sbjct: 271249 gggcagggccaggggcaggg 271268
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 5.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 219 ggcggcctcgcgcagaagcccgtggcgccgcaggacgcgg 258 ||||||||||||||| |||| ||||||||||| ||||| Sbjct: 1644702 ggcggcctcgcgcagcttcccgcggcgccgcaggccgcgg 1644741
>emb|AL034384.1|HSMTM0 Human chromosome Xq28, cosmid clones 7H3, 14D7, C1230, 11E7, F1096, A12197, 12G8, A09100; complete sequence bases 1..217657 Length = 217657 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ggccaggggcagggaggagg 181 |||||||||||||||||||| Sbjct: 55189 ggccaggggcagggaggagg 55208
>dbj|D87003.1| Homo sapiens immunoglobulin lambda gene locus DNA, clone:2H8 Length = 43742 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 gggcagggccaggggcaggg 175 |||||||||||||||||||| Sbjct: 31628 gggcagggccaggggcaggg 31647 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 156 gggcagggccaggggcaggg 175 |||||||||||||||||||| Sbjct: 31616 gggcagggccaggggcaggg 31635 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,334,800 Number of Sequences: 3902068 Number of extensions: 2334800 Number of successful extensions: 78702 Number of sequences better than 10.0: 103 Number of HSP's better than 10.0 without gapping: 112 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 75747 Number of HSP's gapped (non-prelim): 2937 length of query: 410 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 388 effective length of database: 17,147,199,772 effective search space: 6653113511536 effective search space used: 6653113511536 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)