ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast01e11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_472387.1| Oryza sativa (japonica cultivar-group), predic... 266 6e-68
2emb|AL731639.3|OSJN00288 Oryza sativa genomic DNA, chromosome 4,... 196 4e-47
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 196 4e-47
4gb|BT019295.1| Zea mays clone Contig968.F mRNA sequence 86 1e-13
5gb|BT017347.1| Zea mays clone EL01N0323E09.c mRNA sequence 80 7e-12
6gb|AY107532.1| Zea mays PCO116468 mRNA sequence 80 7e-12
7dbj|AK067722.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
9dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
10gb|AE005850.1| Caulobacter crescentus CB15 section 176 of 359 of... 44 0.39
11gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 42 1.5
12gb|AC104274.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
13gb|AC131649.2| Homo sapiens chromosome 16 clone RP11-609N14, com... 42 1.5
14gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome 42 1.5
15gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 42 1.5
16dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
17gb|AC027277.5| Homo sapiens chromosome 16 clone RP11-27M24, comp... 42 1.5
18gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.5
19dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.5
20gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 6.1
21emb|BX052108.1|CNS09CDC Single read from an extremity of a full-... 40 6.1
22emb|BX052107.1|CNS09CDB Single read from an extremity of a full-... 40 6.1
23emb|BX049347.1|CNS09A8N Single read from an extremity of a full-... 40 6.1
24emb|BX046501.1|CNS0981L Single read from an extremity of a full-... 40 6.1
25emb|BX046500.1|CNS0981K Single read from an extremity of a full-... 40 6.1
26emb|BX044196.1|CNS0969K Single read from an extremity of a full-... 40 6.1
27emb|BX028495.1|CNS08U5F Single read from an extremity of a full-... 40 6.1
28emb|BX016550.1|CNS08KXM Single read from an extremity of a full-... 40 6.1
29emb|BX842653.1| Bdellovibrio bacteriovorus complete genome, stra... 40 6.1
30emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete ... 40 6.1
31gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 6.1
32gb|AE005963.1| Caulobacter crescentus CB15 section 289 of 359 of... 40 6.1
33gb|AE012526.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 6.1
34gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 6.1
35gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 6.1
36dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
37dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
38gb|AC131212.6| Homo sapiens 12 BAC RP13-554M15 (Rowsell Park Can... 40 6.1
39gb|AC068491.4| Homo sapiens BAC clone RP11-803D5 from 2, complet... 40 6.1
40gb|AC025810.5| Homo sapiens chromosome 16 clone CTD-2034I21, com... 40 6.1
41dbj|AP004223.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
42dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.1
43gb|AE004735.1| Pseudomonas aeruginosa PAO1, section 296 of 529 o... 40 6.1
44gb|AC093616.5| Homo sapiens BAC clone RP13-511M20 from 2, comple... 40 6.1
45dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
46dbj|AP003686.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
47dbj|AK110943.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.1
48dbj|AK103764.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.1
49emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 6.1
50gb|AF157960.1|AF157960 Pachyptila desolata prion protein precurs... 40 6.1
51gb|AF157959.1|AF157959 Pachyptila turtur prion protein precursor... 40 6.1
52gb|AF157958.1|AF157958 Tyto alba prion protein precursor (PrP) g... 40 6.1
53gb|AC123793.5| Mus musculus BAC clone RP24-315L18 from chromosom... 40 6.1
54gb|U10904.1|PAU10904 Pseudomonas aeruginosa PAO1 glutamine phosp... 40 6.1
55dbj|D50681.1| Rhodospirillum photometricum pufL and pufM genes f... 40 6.1
56dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1 
>ref|XM_472387.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 828

 Score =  266 bits (134), Expect = 6e-68
 Identities = 277/325 (85%)
 Strand = Plus / Plus

                                                                       
Query: 124 cggcgcagtccgcgtcgcgcggcggggccaacccgctggccgagctgaccgaccgcttca 183
           |||||||| | ||| |||| || |||||||||||||| || ||||||||||||||| |||
Sbjct: 50  cggcgcaggcggcggcgcggggtggggccaacccgctcgcggagctgaccgaccgcgtca 109

                                                                       
Query: 184 ggtcgctggaggtcggggtgcgcgagtggatggcgaagcagcccacccacatcgaggccg 243
            | | ||||||| |||  |||| | |||| |||||||||||||||| ||| |||||||||
Sbjct: 110 agaccctggaggccggcctgcgggcgtggctggcgaagcagcccacgcacgtcgaggccg 169

                                                                       
Query: 244 ccgtcaccacggcgttcggggctgtgcagggcggcgcgctcggcgggctcatgggcacgt 303
           ||||| |||| ||  ||||||| |||||||||||||| ||||||||||| ||||||||| 
Sbjct: 170 ccgtcgccaccgccgtcggggccgtgcagggcggcgccctcggcgggctgatgggcacgc 229

                                                                       
Query: 304 tcgcgcccgaaggaggggcggngctccccgtgccgcagccgcctcccggtctcgacccca 363
           ||||||| || || ||| ||  | ||||||||||||||||||| |||||   ||||||||
Sbjct: 230 tcgcgccggacggcgggtcgccgttccccgtgccgcagccgccgcccggggccgacccca 289

                                                                       
Query: 364 aggccatggccaccttcaagcaagcgcaggctttggcaggcgggccactggtgcaagctc 423
           | ||| | ||| |||||||||| ||||||||||||||||| || |||||||||||||| |
Sbjct: 290 acgccctcgcctccttcaagcaggcgcaggctttggcaggtggaccactggtgcaagccc 349

                                    
Query: 424 gaaattttgcagtcatgactggtgc 448
           |||| ||||| ||||||||||||||
Sbjct: 350 gaaactttgccgtcatgactggtgc 374



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 43/47 (91%), Gaps = 3/47 (6%)
 Strand = Plus / Plus

                                                          
Query: 63  atggaagggatggggcag---aagaggcgcccgctggtggtgatggc 106
           ||||||||||||||||||   |||||||| |||||||||||||||||
Sbjct: 1   atggaagggatggggcagcagaagaggcggccgctggtggtgatggc 47
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>emb|AL731639.3|OSJN00288 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000315_02,
             complete sequence
          Length = 112404

 Score =  196 bits (99), Expect = 4e-47
 Identities = 227/270 (84%)
 Strand = Plus / Minus

                                                                         
Query: 124   cggcgcagtccgcgtcgcgcggcggggccaacccgctggccgagctgaccgaccgcttca 183
             |||||||| | ||| |||| || |||||||||||||| || ||||||||||||||| |||
Sbjct: 81314 cggcgcaggcggcggcgcggggtggggccaacccgctcgcggagctgaccgaccgcgtca 81255

                                                                         
Query: 184   ggtcgctggaggtcggggtgcgcgagtggatggcgaagcagcccacccacatcgaggccg 243
              | | ||||||| |||  |||| | |||| |||||||||||||||| ||| |||||||||
Sbjct: 81254 agaccctggaggccggcctgcgggcgtggctggcgaagcagcccacgcacgtcgaggccg 81195

                                                                         
Query: 244   ccgtcaccacggcgttcggggctgtgcagggcggcgcgctcggcgggctcatgggcacgt 303
             ||||| |||| ||  ||||||| |||||||||||||| ||||||||||| ||||||||| 
Sbjct: 81194 ccgtcgccaccgccgtcggggccgtgcagggcggcgccctcggcgggctgatgggcacgc 81135

                                                                         
Query: 304   tcgcgcccgaaggaggggcggngctccccgtgccgcagccgcctcccggtctcgacccca 363
             ||||||| || || ||| ||  | ||||||||||||||||||| |||||   ||||||||
Sbjct: 81134 tcgcgccggacggcgggtcgccgttccccgtgccgcagccgccgcccggggccgacccca 81075

                                           
Query: 364   aggccatggccaccttcaagcaagcgcagg 393
             | ||| | ||| |||||||||| |||||||
Sbjct: 81074 acgccctcgcctccttcaagcaggcgcagg 81045



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                        
Query: 390   caggctttggcaggcgggccactggtgcaagctcgaaattttgcagtcatgactggtgc 448
             |||||||||||||| || |||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 80553 caggctttggcaggtggaccactggtgcaagcccgaaactttgccgtcatgactggtgc 80495



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 49/54 (90%), Gaps = 3/54 (5%)
 Strand = Plus / Minus

                                                                   
Query: 56    cggcgggatggaagggatggggcag---aagaggcgcccgctggtggtgatggc 106
             ||||| |||||||||||||||||||   |||||||| |||||||||||||||||
Sbjct: 81370 cggcgagatggaagggatggggcagcagaagaggcggccgctggtggtgatggc 81317
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  196 bits (99), Expect = 4e-47
 Identities = 227/270 (84%)
 Strand = Plus / Minus

                                                                            
Query: 124      cggcgcagtccgcgtcgcgcggcggggccaacccgctggccgagctgaccgaccgcttca 183
                |||||||| | ||| |||| || |||||||||||||| || ||||||||||||||| |||
Sbjct: 20111409 cggcgcaggcggcggcgcggggtggggccaacccgctcgcggagctgaccgaccgcgtca 20111350

                                                                            
Query: 184      ggtcgctggaggtcggggtgcgcgagtggatggcgaagcagcccacccacatcgaggccg 243
                 | | ||||||| |||  |||| | |||| |||||||||||||||| ||| |||||||||
Sbjct: 20111349 agaccctggaggccggcctgcgggcgtggctggcgaagcagcccacgcacgtcgaggccg 20111290

                                                                            
Query: 244      ccgtcaccacggcgttcggggctgtgcagggcggcgcgctcggcgggctcatgggcacgt 303
                ||||| |||| ||  ||||||| |||||||||||||| ||||||||||| ||||||||| 
Sbjct: 20111289 ccgtcgccaccgccgtcggggccgtgcagggcggcgccctcggcgggctgatgggcacgc 20111230

                                                                            
Query: 304      tcgcgcccgaaggaggggcggngctccccgtgccgcagccgcctcccggtctcgacccca 363
                ||||||| || || ||| ||  | ||||||||||||||||||| |||||   ||||||||
Sbjct: 20111229 tcgcgccggacggcgggtcgccgttccccgtgccgcagccgccgcccggggccgacccca 20111170

                                              
Query: 364      aggccatggccaccttcaagcaagcgcagg 393
                | ||| | ||| |||||||||| |||||||
Sbjct: 20111169 acgccctcgcctccttcaagcaggcgcagg 20111140



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                           
Query: 390      caggctttggcaggcgggccactggtgcaagctcgaaattttgcagtcatgactggtgc 448
                |||||||||||||| || |||||||||||||| ||||| ||||| ||||||||||||||
Sbjct: 20110648 caggctttggcaggtggaccactggtgcaagcccgaaactttgccgtcatgactggtgc 20110590



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 49/54 (90%), Gaps = 3/54 (5%)
 Strand = Plus / Minus

                                                                      
Query: 56       cggcgggatggaagggatggggcag---aagaggcgcccgctggtggtgatggc 106
                ||||| |||||||||||||||||||   |||||||| |||||||||||||||||
Sbjct: 20111465 cggcgagatggaagggatggggcagcagaagaggcggccgctggtggtgatggc 20111412
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>gb|BT019295.1| Zea mays clone Contig968.F mRNA sequence
          Length = 1133

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 114/138 (82%)
 Strand = Plus / Minus

                                                                       
Query: 209 gtggatggcgaagcagcccacccacatcgaggccgccgtcaccacggcgttcggggctgt 268
           |||||||||||||||||||| ||||||||||||||| ||  |||||||  | ||||| ||
Sbjct: 917 gtggatggcgaagcagcccatccacatcgaggccgcggtgtccacggccgttggggcggt 858

                                                                       
Query: 269 gcagggcggcgcgctcggcgggctcatgggcacgttcgcgcccgaaggaggggcggngct 328
           ||||||||| || || || |||||||||||| || || |  |||| |||||| ||  | |
Sbjct: 857 gcagggcggggctctgggtgggctcatgggctcgctcacagccgacggagggtcgccgtt 798

                             
Query: 329 ccccgtgccgcagccgcc 346
           |||| | |||||||||||
Sbjct: 797 ccccatcccgcagccgcc 780



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 412 tggtgcaagctcgaaattttgcagtcatgactggtgcaaa 451
           |||||||||| ||||| ||||||||||||||||| |||||
Sbjct: 714 tggtgcaagcccgaaactttgcagtcatgactggcgcaaa 675
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>gb|BT017347.1| Zea mays clone EL01N0323E09.c mRNA sequence
          Length = 1079

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 82/96 (85%)
 Strand = Plus / Plus

                                                                       
Query: 204 cgcgagtggatggcgaagcagcccacccacatcgaggccgccgtcaccacggcgttcggg 263
           |||| ||||||||||||||| |||| ||| ||||||||||| || ||||||||  | |||
Sbjct: 150 cgcgcgtggatggcgaagcaacccatccaaatcgaggccgcggtgaccacggccgtgggg 209

                                               
Query: 264 gctgtgcagggcggcgcgctcggcgggctcatgggc 299
           || ||||||||||| || || || ||||||||||||
Sbjct: 210 gcggtgcagggcggggctctgggtgggctcatgggc 245



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 72/88 (81%)
 Strand = Plus / Plus

                                                                       
Query: 364 aggccatggccaccttcaagcaagcgcaggctttggcaggcgggccactggtgcaagctc 423
           ||||||||||  | |||||||| || |||||||| || || || ||  |||||||||| |
Sbjct: 310 aggccatggcgtcgttcaagcaggcccaggctttagctggtggacccttggtgcaagccc 369

                                       
Query: 424 gaaattttgcagtcatgactggtgcaaa 451
           | || |||||||||||||| || |||||
Sbjct: 370 ggaactttgcagtcatgaccggcgcaaa 397
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>gb|AY107532.1| Zea mays PCO116468 mRNA sequence
          Length = 1087

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 82/96 (85%)
 Strand = Plus / Plus

                                                                       
Query: 204 cgcgagtggatggcgaagcagcccacccacatcgaggccgccgtcaccacggcgttcggg 263
           |||| ||||||||||||||| |||| ||| ||||||||||| || ||||||||  | |||
Sbjct: 162 cgcgcgtggatggcgaagcaacccatccaaatcgaggccgcggtgaccacggccgtgggg 221

                                               
Query: 264 gctgtgcagggcggcgcgctcggcgggctcatgggc 299
           || ||||||||||| || || || ||||||||||||
Sbjct: 222 gcggtgcagggcggggctctgggtgggctcatgggc 257



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 73/88 (82%)
 Strand = Plus / Plus

                                                                       
Query: 364 aggccatggccaccttcaagcaagcgcaggctttggcaggcgggccactggtgcaagctc 423
           ||||||||||  | |||||||| || |||||||| || || || ||  |||||||||| |
Sbjct: 322 aggccatggcgtcgttcaagcaggcccaggctttagctggtggacctttggtgcaagccc 381

                                       
Query: 424 gaaattttgcagtcatgactggtgcaaa 451
           | || |||||||||||||| ||||||||
Sbjct: 382 ggaactttgcagtcatgaccggtgcaaa 409
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>dbj|AK067722.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120F02, full
           insert sequence
          Length = 2216

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 74/86 (86%)
 Strand = Plus / Plus

                                                                       
Query: 366 gccatggccaccttcaagcaagcgcaggctttggcaggcgggccactggtgcaagctcga 425
           ||||||||  |||||||||| || |||||||| || || || ||| |||||||||| || 
Sbjct: 320 gccatggcgtccttcaagcaggctcaggctttagctggtggaccattggtgcaagcccgg 379

                                     
Query: 426 aattttgcagtcatgactggtgcaaa 451
           ||||||||||| ||||||||||||||
Sbjct: 380 aattttgcagttatgactggtgcaaa 405



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 96/116 (82%)
 Strand = Plus / Plus

                                                                       
Query: 187 cgctggaggtcggggtgcgcgagtggatggcgaagcagcccacccacatcgaggccgccg 246
           |||||||||  ||| | ||| ||||||||||| ||||||| || |||||||||||||| |
Sbjct: 138 cgctggaggcggggttccgcaagtggatggcggagcagccgacgcacatcgaggccgcgg 197

                                                                   
Query: 247 tcaccacggcgttcggggctgtgcagggcggcgcgctcggcgggctcatgggcacg 302
           | ||||||||  | ||||| |||||||| |  ||||| || || ||||||||||||
Sbjct: 198 tgaccacggccgtgggggcggtgcagggggcggcgctggggggcctcatgggcacg 253
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 96/116 (82%)
 Strand = Plus / Minus

                                                                            
Query: 187      cgctggaggtcggggtgcgcgagtggatggcgaagcagcccacccacatcgaggccgccg 246
                |||||||||  ||| | ||| ||||||||||| ||||||| || |||||||||||||| |
Sbjct: 19279297 cgctggaggcggggttccgcaagtggatggcggagcagccgacgcacatcgaggccgcgg 19279238

                                                                        
Query: 247      tcaccacggcgttcggggctgtgcagggcggcgcgctcggcgggctcatgggcacg 302
                | ||||||||  | ||||| |||||||| |  ||||| || || ||||||||||||
Sbjct: 19279237 tgaccacggccgtgggggcggtgcagggggcggcgctggggggcctcatgggcacg 19279182



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                            
Query: 391      aggctttggcaggcgggccactggtgcaagctcgaaattttgcagtcatgactggtgcaa 450
                ||||||| || || || ||| |||||||||| || ||||||||||| |||||||||||||
Sbjct: 19278437 aggctttagctggtggaccattggtgcaagcccggaattttgcagttatgactggtgcaa 19278378

                 
Query: 451      a 451
                |
Sbjct: 19278377 a 19278377



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 367     ccatggccaccttcaagcaa 386
               ||||||||||||||||||||
Sbjct: 4350969 ccatggccaccttcaagcaa 4350988
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>dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0458B05
          Length = 144917

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 96/116 (82%)
 Strand = Plus / Minus

                                                                         
Query: 187   cgctggaggtcggggtgcgcgagtggatggcgaagcagcccacccacatcgaggccgccg 246
             |||||||||  ||| | ||| ||||||||||| ||||||| || |||||||||||||| |
Sbjct: 47095 cgctggaggcggggttccgcaagtggatggcggagcagccgacgcacatcgaggccgcgg 47036

                                                                     
Query: 247   tcaccacggcgttcggggctgtgcagggcggcgcgctcggcgggctcatgggcacg 302
             | ||||||||  | ||||| |||||||| |  ||||| || || ||||||||||||
Sbjct: 47035 tgaccacggccgtgggggcggtgcagggggcggcgctggggggcctcatgggcacg 46980



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                         
Query: 391   aggctttggcaggcgggccactggtgcaagctcgaaattttgcagtcatgactggtgcaa 450
             ||||||| || || || ||| |||||||||| || ||||||||||| |||||||||||||
Sbjct: 46235 aggctttagctggtggaccattggtgcaagcccggaattttgcagttatgactggtgcaa 46176

              
Query: 451   a 451
             |
Sbjct: 46175 a 46175
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>gb|AE005850.1| Caulobacter crescentus CB15 section 176 of 359 of the complete genome
          Length = 11211

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 158  gctggccgagctgaccgaccgcttca 183
            |||| |||||||||||||||||||||
Sbjct: 6648 gctgaccgagctgaccgaccgcttca 6623
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 269     gcagggcggcgcgctcggcgg 289
               |||||||||||||||||||||
Sbjct: 2672215 gcagggcggcgcgctcggcgg 2672235
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>gb|AC104274.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1171_H02,
             complete sequence
          Length = 109969

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 97    tggtgatggcctcctcgtcga 117
             |||||||||||||||||||||
Sbjct: 45507 tggtgatggcctcctcgtcga 45487
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>gb|AC131649.2| Homo sapiens chromosome 16 clone RP11-609N14, complete sequence
          Length = 182518

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 430    ttgcagtcatgactggtgcaa 450
              |||||||||||||||||||||
Sbjct: 181166 ttgcagtcatgactggtgcaa 181186
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>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome
          Length = 3665893

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 156     ccgctggccgagctgaccgac 176
               |||||||||||||||||||||
Sbjct: 3088582 ccgctggccgagctgaccgac 3088602
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                            
Query: 123     gcggcgcagtccgcgtcgcgcggcggggc 151
               |||||||||||||| ||||||||||||||
Sbjct: 3282109 gcggcgcagtccgc-tcgcgcggcggggc 3282082
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 97      tggtgatggcctcctcgtcga 117
               |||||||||||||||||||||
Sbjct: 9063510 tggtgatggcctcctcgtcga 9063490
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>gb|AC027277.5| Homo sapiens chromosome 16 clone RP11-27M24, complete sequence
          Length = 163735

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 430   ttgcagtcatgactggtgcaa 450
             |||||||||||||||||||||
Sbjct: 90222 ttgcagtcatgactggtgcaa 90202
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 127    cgcagtccgcgtcgcgcggcggggc 151
              ||||||||||| |||||||||||||
Sbjct: 617642 cgcagtccgcgccgcgcggcggggc 617618



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 278     cgcgctcggcgggctcatgg 297
               ||||||||||||||||||||
Sbjct: 4888870 cgcgctcggcgggctcatgg 4888889
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 264     gctgtgcagggcggcgcgctcggcg 288
               ||||||||| |||||||||||||||
Sbjct: 4652029 gctgtgcagcgcggcgcgctcggcg 4652053



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 341     gccgcctcccggtctcgacc 360
               ||||||||||||||||||||
Sbjct: 3191317 gccgcctcccggtctcgacc 3191298
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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 114     tcgacaacggcggcgcagtc 133
               ||||||||||||||||||||
Sbjct: 1013011 tcgacaacggcggcgcagtc 1013030
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>emb|BX052108.1|CNS09CDC Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC3AC04 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 935

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 105 gcctcctcgtcgacaacggc 124
           ||||||||||||||||||||
Sbjct: 682 gcctcctcgtcgacaacggc 701
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>emb|BX052107.1|CNS09CDB Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC3AC04 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 812

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 105 gcctcctcgtcgacaacggc 124
           ||||||||||||||||||||
Sbjct: 188 gcctcctcgtcgacaacggc 169
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>emb|BX049347.1|CNS09A8N Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC25BA04 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 321

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 105 gcctcctcgtcgacaacggc 124
           ||||||||||||||||||||
Sbjct: 188 gcctcctcgtcgacaacggc 169
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>emb|BX046501.1|CNS0981L Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC20AG03 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 938

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 105 gcctcctcgtcgacaacggc 124
           ||||||||||||||||||||
Sbjct: 683 gcctcctcgtcgacaacggc 702
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>emb|BX046500.1|CNS0981K Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC20AG03 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 831

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 105 gcctcctcgtcgacaacggc 124
           ||||||||||||||||||||
Sbjct: 188 gcctcctcgtcgacaacggc 169
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>emb|BX044196.1|CNS0969K Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC17CE08 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 996

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 105 gcctcctcgtcgacaacggc 124
           ||||||||||||||||||||
Sbjct: 687 gcctcctcgtcgacaacggc 706
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>emb|BX028495.1|CNS08U5F Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAA42CC10 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 825

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 105 gcctcctcgtcgacaacggc 124
           ||||||||||||||||||||
Sbjct: 652 gcctcctcgtcgacaacggc 671
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>emb|BX016550.1|CNS08KXM Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA24DE06 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 441

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 105 gcctcctcgtcgacaacggc 124
           ||||||||||||||||||||
Sbjct: 381 gcctcctcgtcgacaacggc 362
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>emb|BX842653.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 8/11
          Length = 347636

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 91     cgctggtggtgatggcctcc 110
              ||||||||||||||||||||
Sbjct: 333180 cgctggtggtgatggcctcc 333161
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>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29
          Length = 292100

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 269    gcagggcggcgcgctcggcg 288
              ||||||||||||||||||||
Sbjct: 181025 gcagggcggcgcgctcggcg 181006
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 365    ggccatggccaccttcaagc 384
              ||||||||||||||||||||
Sbjct: 657814 ggccatggccaccttcaagc 657795
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>gb|AE005963.1| Caulobacter crescentus CB15 section 289 of 359 of the complete genome
          Length = 11104

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 356   cgaccccaaggccatggcca 375
             ||||||||||||||||||||
Sbjct: 10446 cgaccccaaggccatggcca 10427
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>gb|AE012526.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 434
            of 460 of the complete genome
          Length = 10116

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 266  tgtgcagggcggcgcgctcggcgg 289
            ||||||||||| ||||||||||||
Sbjct: 4388 tgtgcagggcgccgcgctcggcgg 4411
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 272     gggcggcgcgctcggcgggc 291
               ||||||||||||||||||||
Sbjct: 3682579 gggcggcgcgctcggcgggc 3682560
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 266     tgtgcagggcggcgcgctcggcgg 289
               ||||||||||| ||||||||||||
Sbjct: 4872748 tgtgcagggcgccgcgctcggcgg 4872771
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                    
Query: 213      atggcgaagcagcccacccacatcgaggccgccgtc 248
                ||||||||| || || |||||||| |||||||||||
Sbjct: 20466032 atggcgaagaagacctcccacatccaggccgccgtc 20465997
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 221      gcagcccacccacatcgagg 240
                ||||||||||||||||||||
Sbjct: 40547103 gcagcccacccacatcgagg 40547084
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>gb|AC131212.6| Homo sapiens 12 BAC RP13-554M15 (Rowsell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 160039

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    tggaagggatggggcagaag 83
             ||||||||||||||||||||
Sbjct: 25889 tggaagggatggggcagaag 25870
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>gb|AC068491.4| Homo sapiens BAC clone RP11-803D5 from 2, complete sequence
          Length = 176551

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     agggatggggcagaagaggc 87
              ||||||||||||||||||||
Sbjct: 168180 agggatggggcagaagaggc 168161
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>gb|AC025810.5| Homo sapiens chromosome 16 clone CTD-2034I21, complete sequence
          Length = 71530

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    ggaagggatggggcagaaga 84
             ||||||||||||||||||||
Sbjct: 57499 ggaagggatggggcagaaga 57518
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>dbj|AP004223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1033B05
          Length = 138882

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 221    gcagcccacccacatcgagg 240
              ||||||||||||||||||||
Sbjct: 108727 gcagcccacccacatcgagg 108708
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 269     gcagggcggcgcgctcggcg 288
               ||||||||||||||||||||
Sbjct: 4257560 gcagggcggcgcgctcggcg 4257579



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 188     gctggaggtcggggtgcgcg 207
               ||||||||||||||||||||
Sbjct: 4215472 gctggaggtcggggtgcgcg 4215491
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>gb|AE004735.1| Pseudomonas aeruginosa PAO1, section 296 of 529 of the complete
            genome
          Length = 11976

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 151  ccaacccgctggccgagctg 170
            ||||||||||||||||||||
Sbjct: 1547 ccaacccgctggccgagctg 1528
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>gb|AC093616.5| Homo sapiens BAC clone RP13-511M20 from 2, complete sequence
          Length = 192494

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    agggatggggcagaagaggc 87
             ||||||||||||||||||||
Sbjct: 28527 agggatggggcagaagaggc 28508
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>dbj|AP004840.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0544B02
          Length = 156339

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 367   ccatggccaccttcaagcaa 386
             ||||||||||||||||||||
Sbjct: 34533 ccatggccaccttcaagcaa 34552
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>dbj|AP003686.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0659D09
          Length = 168253

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 213   atggcgaagcagcccacccacatcgaggccgccgtc 248
             ||||||||| || || |||||||| |||||||||||
Sbjct: 38327 atggcgaagaagacctcccacatccaggccgccgtc 38292
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>dbj|AK110943.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-H03, full
           insert sequence
          Length = 978

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 367 ccatggccaccttcaagcaa 386
           ||||||||||||||||||||
Sbjct: 101 ccatggccaccttcaagcaa 120
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>dbj|AK103764.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033143H08, full
           insert sequence
          Length = 2135

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 221 gcagcccacccacatcgagg 240
           ||||||||||||||||||||
Sbjct: 8   gcagcccacccacatcgagg 27
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 151     ccaacccgctggccgagctg 170
               ||||||||||||||||||||
Sbjct: 1765785 ccaacccgctggccgagctg 1765804
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>gb|AF157960.1|AF157960 Pachyptila desolata prion protein precursor (PrP) gene, partial cds
          Length = 645

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 326 gctccccgtgccgcagccgcctcc 349
           |||||||||||| |||||||||||
Sbjct: 48  gctccccgtgccccagccgcctcc 25
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>gb|AF157959.1|AF157959 Pachyptila turtur prion protein precursor (PrP) gene, partial cds
          Length = 645

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 326 gctccccgtgccgcagccgcctcc 349
           |||||||||||| |||||||||||
Sbjct: 48  gctccccgtgccccagccgcctcc 25
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>gb|AF157958.1|AF157958 Tyto alba prion protein precursor (PrP) gene, partial cds
          Length = 645

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 326 gctccccgtgccgcagccgcctcc 349
           |||||||||||| |||||||||||
Sbjct: 48  gctccccgtgccccagccgcctcc 25
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>gb|AC123793.5| Mus musculus BAC clone RP24-315L18 from chromosome 1, complete sequence
          Length = 206081

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 65     ggaagggatggggcagaaga 84
              ||||||||||||||||||||
Sbjct: 107296 ggaagggatggggcagaaga 107277
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>gb|U10904.1|PAU10904 Pseudomonas aeruginosa PAO1 glutamine phosphoribosylpyrophosphate
            amidotransferase (purF) gene, partial cds and
            O-succinylhomoserine sulfhydrylase (metZ) gene, complete
            cds
          Length = 1936

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 151  ccaacccgctggccgagctg 170
            ||||||||||||||||||||
Sbjct: 1170 ccaacccgctggccgagctg 1189
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>dbj|D50681.1| Rhodospirillum photometricum pufL and pufM genes for photosynthetic
            reaction center L and M subunits, partial cds
          Length = 1557

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 270  cagggcggcgcgctcggcgg 289
            ||||||||||||||||||||
Sbjct: 1534 cagggcggcgcgctcggcgg 1515
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>dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0482D04
          Length = 144583

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 221   gcagcccacccacatcgagg 240
             ||||||||||||||||||||
Sbjct: 27118 gcagcccacccacatcgagg 27099


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,731,801
Number of Sequences: 3902068
Number of extensions: 2731801
Number of successful extensions: 63894
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 61950
Number of HSP's gapped (non-prelim): 1968
length of query: 451
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 429
effective length of database: 17,147,199,772
effective search space: 7356148702188
effective search space used: 7356148702188
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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