ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast01e07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464002.1| Oryza sativa (japonica cultivar-group), mRNA 184 2e-43
2dbj|AK120974.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 2e-43
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
4dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
5ref|NM_125690.2| Arabidopsis thaliana unknown protein AT5G62960 ... 66 1e-07
6gb|BT010994.1| Arabidopsis thaliana At5g62960 mRNA, complete cds 66 1e-07
7gb|BT010867.1| Arabidopsis thaliana At5g62960 mRNA, complete cds 66 1e-07
8emb|BX830029.1|CNS0A03B Arabidopsis thaliana Full-length cDNA Co... 66 1e-07
9dbj|AB009051.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 62 2e-06
10emb|BX829985.1|CNS0A01B Arabidopsis thaliana Full-length cDNA Co... 58 2e-05
11ref|XM_550284.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.024
12dbj|AK067987.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.024
13ref|XM_476752.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.5
14gb|BC081838.1| Rattus norvegicus eukaryotic translation initiati... 42 1.5
15ref|XM_662416.1| Cryptosporidium hominis TU502 hypothetical prot... 42 1.5
16emb|CR352231.8| Zebrafish DNA sequence from clone CH211-216G8 in... 42 1.5
17emb|BX537338.9| Zebrafish DNA sequence from clone DKEY-258E8 in ... 42 1.5
18ref|XM_626707.1| Cryptosporidium parvum Iowa II hypothetical pro... 42 1.5
19dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
20gb|AY427463.1| Cyerce nigricans 28S ribosomal RNA gene, partial ... 42 1.5
21gb|AY211023.1| Streptomyces violaceoruber strain SANK95570 plasm... 42 1.5
22ref|NM_013223.1| Rattus norvegicus eukaryotic translation initia... 42 1.5
23gb|AE014133.1| Streptococcus mutans UA159, complete genome 42 1.5
24dbj|AP005840.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
25emb|CR854984.10| Zebrafish DNA sequence from clone DKEY-62B6 in ... 42 1.5
26gb|L27707.1|RATEIF2APK Rat eukaryotic hemin-sensitive initiation... 42 1.5
27ref|NM_104216.1| Arabidopsis thaliana unknown protein AT1G53370 ... 40 5.8
28gb|AC024759.2| Caenorhabditis elegans cosmid Y37E11AR, complete ... 40 5.8
29gb|AC144735.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.8
30gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 5.8
31emb|AL136987.11| Human DNA sequence from clone RP5-1011O1 on chr... 40 5.8
32dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
33dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
34gb|AC105036.14| Homo sapiens chromosome 15, clone CTD-2323K18, c... 40 5.8
35dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromo... 40 5.8
36dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
37gb|AC008007.7|AC008007 Genomic sequence for Arabidopsis thaliana... 40 5.8
38dbj|AK100171.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
39gb|AC147612.5| Mus musculus BAC clone RP23-374K9 from 6, complet... 40 5.8 
>ref|XM_464002.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1620

 Score =  184 bits (93), Expect = 2e-43
 Identities = 189/221 (85%)
 Strand = Plus / Plus

                                                                       
Query: 212 ttctgggggtacctgctgcagatcatctatcagacaaatgcaggagccgtgatgcttaca 271
           |||||||| |||||||| ||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 660 ttctggggttacctgctccagatcatctaccagacaaatgcaggcgcagtgatgcttaca 719

                                                                       
Query: 272 gactgtgtcttctggttcatcatttttccattcctcaccgtcaaagattacagtatgaac 331
           || ||||| || ||||||||||| || |||||||| || ||||||||||||| | | || 
Sbjct: 720 gattgtgtgttttggttcatcatcttcccattccttacagtcaaagattacaatctaaat 779

                                                                       
Query: 332 tttttgctgataggaatgcactcggtcaacgctgttttcctgctcggcgaagcatcgcta 391
           |||||| ||||||||||||||||||| || || |||||| |||| || |||||  | || 
Sbjct: 780 tttttgttgataggaatgcactcggtaaatgccgttttcttgcttggtgaagctgccctg 839

                                                    
Query: 392 aatagcctgcgcttcccgtggttccggatcgcgtatttctt 432
           |||||| || ||||||| ||||||||| |||| ||||||||
Sbjct: 840 aatagcttgagcttcccttggttccgggtcgcatatttctt 880



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 52/54 (96%)
 Strand = Plus / Plus

                                                                 
Query: 1   cttctactactacacccagtggaccttcattctggtgacggtttacttcgggct 54
           ||||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 452 cttctactactacactcagtggaccttcattctggtgacgatttacttcgggct 505
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>dbj|AK120974.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041I07, full
           insert sequence
          Length = 1620

 Score =  184 bits (93), Expect = 2e-43
 Identities = 189/221 (85%)
 Strand = Plus / Plus

                                                                       
Query: 212 ttctgggggtacctgctgcagatcatctatcagacaaatgcaggagccgtgatgcttaca 271
           |||||||| |||||||| ||||||||||| |||||||||||||| || ||||||||||||
Sbjct: 660 ttctggggttacctgctccagatcatctaccagacaaatgcaggcgcagtgatgcttaca 719

                                                                       
Query: 272 gactgtgtcttctggttcatcatttttccattcctcaccgtcaaagattacagtatgaac 331
           || ||||| || ||||||||||| || |||||||| || ||||||||||||| | | || 
Sbjct: 720 gattgtgtgttttggttcatcatcttcccattccttacagtcaaagattacaatctaaat 779

                                                                       
Query: 332 tttttgctgataggaatgcactcggtcaacgctgttttcctgctcggcgaagcatcgcta 391
           |||||| ||||||||||||||||||| || || |||||| |||| || |||||  | || 
Sbjct: 780 tttttgttgataggaatgcactcggtaaatgccgttttcttgcttggtgaagctgccctg 839

                                                    
Query: 392 aatagcctgcgcttcccgtggttccggatcgcgtatttctt 432
           |||||| || ||||||| ||||||||| |||| ||||||||
Sbjct: 840 aatagcttgagcttcccttggttccgggtcgcatatttctt 880



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 52/54 (96%)
 Strand = Plus / Plus

                                                                 
Query: 1   cttctactactacacccagtggaccttcattctggtgacggtttacttcgggct 54
           ||||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 452 cttctactactacactcagtggaccttcattctggtgacgatttacttcgggct 505
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Plus

                                                                           
Query: 242     cagacaaatgcaggagccgtgatgcttacagactgtgtcttctggttcatcatttttcca 301
               |||||||||||||| || |||||||||||||| ||||| || ||||||||||| || |||
Sbjct: 1597953 cagacaaatgcaggcgcagtgatgcttacagattgtgtgttttggttcatcatcttccca 1598012

                                     
Query: 302     ttcctcaccgtcaaagattaca 323
               ||||| || |||||||||||||
Sbjct: 1598013 ttccttacagtcaaagattaca 1598034



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                                 
Query: 19      gtggaccttcattctggtgacggtttacttcggg 52
               |||||||||||||||||||||| |||||||||||
Sbjct: 1596621 gtggaccttcattctggtgacgatttacttcggg 1596654



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                             
Query: 339     tgataggaatgcactcggtcaacgctgttttcctgctcggcgaagc 384
               ||||||||||||||||||| || || |||||| |||| || |||||
Sbjct: 1598140 tgataggaatgcactcggtaaatgccgttttcttgcttggtgaagc 1598185



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 212     ttctgggggtacctgctgcagatcatcta 240
               |||||||| |||||||| |||||||||||
Sbjct: 1596947 ttctggggttacctgctccagatcatcta 1596975
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>dbj|AP004150.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1007_D04
          Length = 125503

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Plus

                                                                         
Query: 242   cagacaaatgcaggagccgtgatgcttacagactgtgtcttctggttcatcatttttcca 301
             |||||||||||||| || |||||||||||||| ||||| || ||||||||||| || |||
Sbjct: 35056 cagacaaatgcaggcgcagtgatgcttacagattgtgtgttttggttcatcatcttccca 35115

                                   
Query: 302   ttcctcaccgtcaaagattaca 323
             ||||| || |||||||||||||
Sbjct: 35116 ttccttacagtcaaagattaca 35137



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                               
Query: 19    gtggaccttcattctggtgacggtttacttcggg 52
             |||||||||||||||||||||| |||||||||||
Sbjct: 33724 gtggaccttcattctggtgacgatttacttcggg 33757



 Score = 44.1 bits (22), Expect = 0.37
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                           
Query: 339   tgataggaatgcactcggtcaacgctgttttcctgctcggcgaagc 384
             ||||||||||||||||||| || || |||||| |||| || |||||
Sbjct: 35243 tgataggaatgcactcggtaaatgccgttttcttgcttggtgaagc 35288



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 212   ttctgggggtacctgctgcagatcatcta 240
             |||||||| |||||||| |||||||||||
Sbjct: 34050 ttctggggttacctgctccagatcatcta 34078
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>ref|NM_125690.2| Arabidopsis thaliana unknown protein AT5G62960 mRNA, complete cds
          Length = 1314

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 230 cagatcatctatcagacaaatgcaggagccgtgatgcttacagactgtgtcttctggttc 289
           ||||| |||| |||||  |||||||| || ||  ||||||| ||||||||||||||||||
Sbjct: 778 cagattatctttcagatgaatgcaggtgcagttttgcttactgactgtgtcttctggttc 837

                            
Query: 290 atcatttttccattcct 306
           |||||| |||| |||||
Sbjct: 838 atcattgttcctttcct 854
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>gb|BT010994.1| Arabidopsis thaliana At5g62960 mRNA, complete cds
          Length = 1044

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 230 cagatcatctatcagacaaatgcaggagccgtgatgcttacagactgtgtcttctggttc 289
           ||||| |||| |||||  |||||||| || ||  ||||||| ||||||||||||||||||
Sbjct: 616 cagattatctttcagatgaatgcaggtgcagttttgcttactgactgtgtcttctggttc 675

                            
Query: 290 atcatttttccattcct 306
           |||||| |||| |||||
Sbjct: 676 atcattgttcctttcct 692
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>gb|BT010867.1| Arabidopsis thaliana At5g62960 mRNA, complete cds
          Length = 1150

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 230 cagatcatctatcagacaaatgcaggagccgtgatgcttacagactgtgtcttctggttc 289
           ||||| |||| |||||  |||||||| || ||  ||||||| ||||||||||||||||||
Sbjct: 716 cagattatctttcagatgaatgcaggtgcagttttgcttactgactgtgtcttctggttc 775

                            
Query: 290 atcatttttccattcct 306
           |||||| |||| |||||
Sbjct: 776 atcattgttcctttcct 792
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>emb|BX830029.1|CNS0A03B Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB54ZD10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1310

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 230 cagatcatctatcagacaaatgcaggagccgtgatgcttacagactgtgtcttctggttc 289
           ||||| |||| |||||  |||||||| || ||  ||||||| ||||||||||||||||||
Sbjct: 778 cagattatctttcagatgaatgcaggtgcagttttgcttactgactgtgtcttctggttc 837

                            
Query: 290 atcatttttccattcct 306
           |||||| |||| |||||
Sbjct: 838 atcattgttcctttcct 854
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>dbj|AB009051.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJH22
          Length = 27856

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                       
Query: 264  tgcttacagactgtgtcttctggttcatcatttttccattcct 306
            ||||||| |||||||||||||||||||||||| |||| |||||
Sbjct: 7303 tgcttactgactgtgtcttctggttcatcattgttcctttcct 7345
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>emb|BX829985.1|CNS0A01B Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB51ZD05 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1310

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                       
Query: 230 cagatcatctatcagacaaatgcaggagccgtgatgcttacagactgtgtcttctggttc 289
           ||||| |||| |||||  |||||||| || ||  |||||||  |||||||||||||||||
Sbjct: 773 cagattatctttcagatgaatgcaggtgcagttttgcttactaactgtgtcttctggttc 832

                            
Query: 290 atcatttttccattcct 306
           |||||| |||| |||||
Sbjct: 833 atcattgttcctttcct 849
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>ref|XM_550284.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1577

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 230 cagatcatctatcagacaaatgcaggagccgtgatgcttacaga 273
           |||||||| | ||||||||||||||| || |||||| |||||||
Sbjct: 921 cagatcatgtttcagacaaatgcaggtgctgtgatgattacaga 964



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 392  aatagcctgcgcttcccgtggttccggatcgcgtatttctt 432
            ||||||||||| |||||||||||  | ||||| ||||||||
Sbjct: 1083 aatagcctgcgtttcccgtggtttagaatcgcatatttctt 1123
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>dbj|AK067987.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013121I24, full
           insert sequence
          Length = 1578

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 230 cagatcatctatcagacaaatgcaggagccgtgatgcttacaga 273
           |||||||| | ||||||||||||||| || |||||| |||||||
Sbjct: 922 cagatcatgtttcagacaaatgcaggtgctgtgatgattacaga 965



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                     
Query: 392  aatagcctgcgcttcccgtggttccggatcgcgtatttctt 432
            ||||||||||| |||||||||||  | ||||| ||||||||
Sbjct: 1084 aatagcctgcgtttcccgtggtttagaatcgcatatttctt 1124
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>ref|XM_476752.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 849

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 171 tcgtcgacggggaggacgacg 191
           |||||||||||||||||||||
Sbjct: 257 tcgtcgacggggaggacgacg 277
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>gb|BC081838.1| Rattus norvegicus eukaryotic translation initiation factor 2 alpha
           kinase 1, mRNA (cDNA clone MGC:93597 IMAGE:7132671),
           complete cds
          Length = 2187

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 142 cgccatccacggagccgcccc 162
           |||||||||||||||||||||
Sbjct: 73  cgccatccacggagccgcccc 53
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>ref|XM_662416.1| Cryptosporidium hominis TU502 hypothetical protein (Chro.30164)
           partial mRNA
          Length = 600

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 311 gtcaaagattacagtatgaac 331
           |||||||||||||||||||||
Sbjct: 100 gtcaaagattacagtatgaac 120
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>emb|CR352231.8| Zebrafish DNA sequence from clone CH211-216G8 in linkage group 16,
              complete sequence
          Length = 202686

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 237    tctatcagacaaatgcaggag 257
              |||||||||||||||||||||
Sbjct: 137585 tctatcagacaaatgcaggag 137565
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>emb|BX537338.9| Zebrafish DNA sequence from clone DKEY-258E8 in linkage group 16,
              complete sequence
          Length = 309004

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 237    tctatcagacaaatgcaggag 257
              |||||||||||||||||||||
Sbjct: 147686 tctatcagacaaatgcaggag 147666
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>ref|XM_626707.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd3_1320),
           partial mRNA
          Length = 600

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 311 gtcaaagattacagtatgaac 331
           |||||||||||||||||||||
Sbjct: 100 gtcaaagattacagtatgaac 120
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 171     tcgtcgacggggaggacgacg 191
               |||||||||||||||||||||
Sbjct: 3756970 tcgtcgacggggaggacgacg 3756990
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>gb|AY427463.1| Cyerce nigricans 28S ribosomal RNA gene, partial sequence
          Length = 1063

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 154 agccgccccgaagccggtcgt 174
           |||||||||||||||||||||
Sbjct: 544 agccgccccgaagccggtcgt 524
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>gb|AY211023.1| Streptomyces violaceoruber strain SANK95570 plasmid pSV2, complete
             sequence
          Length = 96742

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 168   cggtcgtcgacggggaggacgacggcacg 196
             ||||||||||||  |||||||||||||||
Sbjct: 69729 cggtcgtcgacgtcgaggacgacggcacg 69757
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>ref|NM_013223.1| Rattus norvegicus eukaryotic translation initiation factor 2 alpha
           kinase 1 (Eif2ak1), mRNA
          Length = 2145

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 142 cgccatccacggagccgcccc 162
           |||||||||||||||||||||
Sbjct: 40  cgccatccacggagccgcccc 20
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>gb|AE014133.1| Streptococcus mutans UA159, complete genome
          Length = 2030921

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 225     tgctgcagatcatctatcaga 245
               |||||||||||||||||||||
Sbjct: 1990053 tgctgcagatcatctatcaga 1990033
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>dbj|AP005840.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0050F10
          Length = 151986

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 171    tcgtcgacggggaggacgacg 191
              |||||||||||||||||||||
Sbjct: 101321 tcgtcgacggggaggacgacg 101341
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>emb|CR854984.10| Zebrafish DNA sequence from clone DKEY-62B6 in linkage group 16,
            complete sequence
          Length = 223943

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 237  tctatcagacaaatgcaggag 257
            |||||||||||||||||||||
Sbjct: 8067 tctatcagacaaatgcaggag 8087
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>gb|L27707.1|RATEIF2APK Rat eukaryotic hemin-sensitive initiation factor 2a kinase (eIF-2a)
           mRNA, complete cds
          Length = 2145

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 142 cgccatccacggagccgcccc 162
           |||||||||||||||||||||
Sbjct: 40  cgccatccacggagccgcccc 20
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>ref|NM_104216.1| Arabidopsis thaliana unknown protein AT1G53370 mRNA, complete cds
          Length = 1068

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 327 tgaactttttgctgatagga 346
           ||||||||||||||||||||
Sbjct: 469 tgaactttttgctgatagga 450
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>gb|AC024759.2| Caenorhabditis elegans cosmid Y37E11AR, complete sequence
          Length = 31268

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 292  catttttccattcctcaccg 311
            ||||||||||||||||||||
Sbjct: 5125 catttttccattcctcaccg 5144
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>gb|AC144735.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0001A14, complete sequence
          Length = 129292

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   gtcgtcgacggggaggacga 189
             ||||||||||||||||||||
Sbjct: 56164 gtcgtcgacggggaggacga 56183
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 187     cgacggcacgagggaggtcgccgg 210
               |||||||||| |||||||||||||
Sbjct: 1279742 cgacggcacgtgggaggtcgccgg 1279719
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>emb|AL136987.11| Human DNA sequence from clone RP5-1011O1 on chromosome 1 Contains the
              RGS1 gene for regulator of G-protein signalling 1, complete
              sequence
          Length = 122562

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 229    gcagatcatctatcagacaa 248
              ||||||||||||||||||||
Sbjct: 101494 gcagatcatctatcagacaa 101475
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 170      gtcgtcgacggggaggacga 189
                ||||||||||||||||||||
Sbjct: 27588888 gtcgtcgacggggaggacga 27588907
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 242     cagacaaatgcaggagccgtgatgcttacaga 273
               |||||||||||||| || |||||| |||||||
Sbjct: 3696750 cagacaaatgcaggtgctgtgatgattacaga 3696719
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>gb|AC105036.14| Homo sapiens chromosome 15, clone CTD-2323K18, complete sequence
          Length = 144333

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 213   tctgggggtacctgctgcag 232
             ||||||||||||||||||||
Sbjct: 52301 tctgggggtacctgctgcag 52282
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>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence
          Length = 3288558

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 370     cctgctcggcgaagcatcgctaaa 393
               ||||| ||||||||||||||||||
Sbjct: 1587158 cctgcccggcgaagcatcgctaaa 1587135
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>dbj|AP003282.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0583G08
          Length = 135295

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 242    cagacaaatgcaggagccgtgatgcttacaga 273
              |||||||||||||| || |||||| |||||||
Sbjct: 105230 cagacaaatgcaggtgctgtgatgattacaga 105199
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>gb|AC008007.7|AC008007 Genomic sequence for Arabidopsis thaliana BAC F12M16 from chromosome I,
              complete sequence
          Length = 130235

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 327    tgaactttttgctgatagga 346
              ||||||||||||||||||||
Sbjct: 109952 tgaactttttgctgatagga 109933
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>dbj|AK100171.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025H05, full
           insert sequence
          Length = 2298

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 170 gtcgtcgacggggaggacga 189
           ||||||||||||||||||||
Sbjct: 484 gtcgtcgacggggaggacga 465
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>gb|AC147612.5| Mus musculus BAC clone RP23-374K9 from 6, complete sequence
          Length = 190156

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 211    gttctgggggtacctgctgc 230
              ||||||||||||||||||||
Sbjct: 121440 gttctgggggtacctgctgc 121459


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,768,651
Number of Sequences: 3902068
Number of extensions: 2768651
Number of successful extensions: 53811
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 53578
Number of HSP's gapped (non-prelim): 233
length of query: 433
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 411
effective length of database: 17,147,199,772
effective search space: 7047499106292
effective search space used: 7047499106292
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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