ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast01b09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PORA_HORVU (P13653) Protochlorophyllide reductase A, chloroplast... 216 2e-56
2PORA_WHEAT (Q41578) Protochlorophyllide reductase A, chloroplast... 215 4e-56
3POR_AVESA (P15904) Protochlorophyllide reductase (EC 1.3.1.33) (... 124 2e-28
4PORA_ARATH (Q42536) Protochlorophyllide reductase A, chloroplast... 123 3e-28
5POR_PEA (Q01289) Protochlorophyllide reductase, chloroplast prec... 122 5e-28
6POR_DAUCA (Q9SDT1) Protochlorophyllide reductase, chloroplast pr... 122 7e-28
7PORA_CUCSA (Q41249) Protochlorophyllide reductase, chloroplast p... 119 4e-27
8PORB_ARATH (P21218) Protochlorophyllide reductase B, chloroplast... 115 6e-26
9PORB_HORVU (Q42850) Protochlorophyllide reductase B, chloroplast... 114 1e-25
10PORC_ARATH (O48741) Protochlorophyllide reductase C, chloroplast... 110 2e-24
11POR_MARPA (O80333) Protochlorophyllide reductase, chloroplast pr... 97 3e-20
12POR_CHLRE (Q39617) Protochlorophyllide reductase, chloroplast pr... 86 4e-17
13POR_PLEBO (O66148) Light-dependent protochlorophyllide reductase... 75 9e-14
14POR_SYNY3 (Q59987) Light-dependent protochlorophyllide reductase... 64 3e-10
15WWOX_BRARE (Q803A8) WW domain-containing oxidoreductase (EC 1.1.... 50 3e-06
16WWOX_HUMAN (Q9NZC7) WW domain-containing oxidoreductase (EC 1.1.... 44 2e-04
17WWOX_CHICK (Q5F389) WW domain-containing oxidoreductase (EC 1.1.... 44 2e-04
18WWOX_PONPY (Q5R9W5) WW domain-containing oxidoreductase (EC 1.1.... 43 5e-04
19WWOX_MOUSE (Q91WL8) WW domain-containing oxidoreductase (EC 1.1.... 39 0.006
20DHRSX_HUMAN (Q8N5I4) Dehydrogenase/reductase SDR family member o... 37 0.028
21RDH14_MOUSE (Q9ERI6) Retinol dehydrogenase 14 (EC 1.1.1.-) (Alco... 36 0.063
22RDH13_HUMAN (Q8NBN7) Retinol dehydrogenase 13 (EC 1.1.1.-) 34 0.18
23RDH14_HUMAN (Q9HBH5) Retinol dehydrogenase 14 (EC 1.1.1.-) (Alco... 33 0.41
24RDH13_MOUSE (Q8CEE7) Retinol dehydrogenase 13 (EC 1.1.1.-) 33 0.41
25RDH12_HUMAN (Q96NR8) Retinol dehydrogenase 12 (EC 1.1.1.-) (All-... 32 0.70
26RDH12_BOVIN (P59837) Retinol dehydrogenase 12 (EC 1.1.1.-) (Doub... 32 0.70
27DHRSX_MOUSE (Q8VBZ0) Dehydrogenase/reductase SDR family member o... 32 0.70
28RDH12_MOUSE (Q8BYK4) Retinol dehydrogenase 12 (EC 1.1.1.-) 32 0.91
29RDH11_HUMAN (Q8TC12) Retinol dehydrogenase 11 (EC 1.1.1.-) (Reti... 31 2.0
30ICAM5_MOUSE (Q60625) Intercellular adhesion molecule 5 precursor... 31 2.0
31YHIM_ECOLI (P37630) Inner membrane protein yhiM 30 2.7
32CASK_CAMDR (P79139) Kappa-casein precursor 30 3.5
33CNX1_ARATH (Q39054) Molybdopterin biosynthesis CNX1 protein (Mol... 30 4.5
34WWOX_DROME (Q9VLU5) WW domain-containing oxidoreductase (EC 1.1.... 29 5.9
35ICAM5_HUMAN (Q9UMF0) Intercellular adhesion molecule 5 precursor... 29 7.7

>PORA_HORVU (P13653) Protochlorophyllide reductase A, chloroplast precursor (EC|
           1.3.1.33) (PCR A) (NADPH-protochlorophyllide
           oxidoreductase A) (POR A)
          Length = 388

 Score =  216 bits (551), Expect = 2e-56
 Identities = 116/161 (72%), Positives = 116/161 (72%)
 Frame = +2

Query: 5   MALQLLPSTLSVPKKGSSMGAVAVKDTAAFLGVSSKAKKASLAVRTQXXXXXXXXXXXXX 184
           MALQLLPSTLSVPKKGSSMGAVAVKDTAAFLGVSSKAKKASLAVRTQ             
Sbjct: 1   MALQLLPSTLSVPKKGSSMGAVAVKDTAAFLGVSSKAKKASLAVRTQVATAPSPVTTSPG 60

Query: 185 XXXXXXXXKKTLRQGVVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXXXG 364
                   KKTLRQGVVVIT               ETGKWHVVMACRDFL         G
Sbjct: 61  STASSPSGKKTLRQGVVVITGASSGLGLAAAKALAETGKWHVVMACRDFLKASKAAKAAG 120

Query: 365 MADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA 487
           MADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA
Sbjct: 121 MADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA 161



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>PORA_WHEAT (Q41578) Protochlorophyllide reductase A, chloroplast precursor (EC|
           1.3.1.33) (PCR A) (NADPH-protochlorophyllide
           oxidoreductase A) (POR A)
          Length = 388

 Score =  215 bits (548), Expect = 4e-56
 Identities = 115/161 (71%), Positives = 115/161 (71%)
 Frame = +2

Query: 5   MALQLLPSTLSVPKKGSSMGAVAVKDTAAFLGVSSKAKKASLAVRTQXXXXXXXXXXXXX 184
           MALQLLPSTLSVPKKGSSMGA AVKDTAAFLGVSSKAKKASLAVRTQ             
Sbjct: 1   MALQLLPSTLSVPKKGSSMGAAAVKDTAAFLGVSSKAKKASLAVRTQVATAPSSVTTSPG 60

Query: 185 XXXXXXXXKKTLRQGVVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXXXG 364
                   KKTLRQGVVVIT               ETGKWHVVMACRDFL         G
Sbjct: 61  SATAKPSGKKTLRQGVVVITGASSGLGLAAAKALAETGKWHVVMACRDFLKASKAAKAAG 120

Query: 365 MADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA 487
           MADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA
Sbjct: 121 MADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA 161



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>POR_AVESA (P15904) Protochlorophyllide reductase (EC 1.3.1.33) (PCR)|
           (NADPH-protochlorophyllide oxidoreductase) (POR)
           (Fragment)
          Length = 313

 Score =  124 bits (310), Expect = 2e-28
 Identities = 62/86 (72%), Positives = 62/86 (72%)
 Frame = +2

Query: 230 VVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXXXGMADGSYTVMHLDLAS 409
           VVVIT               ETGKWHVVMACRDFL         GMADGSYTVMHLDLAS
Sbjct: 1   VVVITGASSGLGLAAAKALAETGKWHVVMACRDFLKASKAAKAAGMADGSYTVMHLDLAS 60

Query: 410 LDSVRQFVDAFRRAEMPLDVLVCNAA 487
           LDSVRQFVDAFRRAEMPLDVLVCNAA
Sbjct: 61  LDSVRQFVDAFRRAEMPLDVLVCNAA 86



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>PORA_ARATH (Q42536) Protochlorophyllide reductase A, chloroplast precursor (EC|
           1.3.1.33) (PCR A) (NADPH-protochlorophyllide
           oxidoreductase A) (POR A)
          Length = 405

 Score =  123 bits (308), Expect = 3e-28
 Identities = 79/179 (44%), Positives = 93/179 (51%), Gaps = 18/179 (10%)
 Frame = +2

Query: 5   MALQ---LLPSTLSVPKKG--SSMGAVAVKDTAAF---LGVSSKAKKASLAVRTQXXXXX 160
           MALQ   L+ S  SV K G  ++  + + K+++ F   L   SKA   S ++R +     
Sbjct: 1   MALQAASLVSSAFSVRKDGKLNASASSSFKESSLFGVSLSEQSKADFVSSSLRCKREQSL 60

Query: 161 ----------XXXXXXXXXXXXXXXXKKTLRQGVVVITXXXXXXXXXXXXXXXETGKWHV 310
                                     KKTLR+G VV+T               ETGKWHV
Sbjct: 61  RNNKAIIRAQAIATSTPSVTKSSLDRKKTLRKGNVVVTGASSGLGLATAKALAETGKWHV 120

Query: 311 VMACRDFLXXXXXXXXXGMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA 487
           +MACRDFL         GM   SYTVMHLDLASLDSVRQFVD FRRAEMPLDVLVCNAA
Sbjct: 121 IMACRDFLKAERAAQSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRAEMPLDVLVCNAA 179



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>POR_PEA (Q01289) Protochlorophyllide reductase, chloroplast precursor (EC|
           1.3.1.33) (PCR) (NADPH-protochlorophyllide
           oxidoreductase) (POR)
          Length = 399

 Score =  122 bits (306), Expect = 5e-28
 Identities = 78/176 (44%), Positives = 98/176 (55%), Gaps = 15/176 (8%)
 Frame = +2

Query: 5   MALQ---LLPSTLSVPKKGSSMGAVAVKDTAAFLGVSS-----KAKKASLAVRTQ----- 145
           MALQ   +LP++ S+PK+G  +GA ++KD+  F GVSS     K    S A+R +     
Sbjct: 1   MALQTASMLPASFSIPKEGK-IGA-SLKDSTLF-GVSSLSDSLKGDFTSSALRCKELRQK 57

Query: 146 --XXXXXXXXXXXXXXXXXXXXXKKTLRQGVVVITXXXXXXXXXXXXXXXETGKWHVVMA 319
                                  KKTLR+G VVIT               E+GKWHV+MA
Sbjct: 58  VGAVRAETAAPATPAVNKSSSEGKKTLRKGNVVITGASSGLGLATAKALAESGKWHVIMA 117

Query: 320 CRDFLXXXXXXXXXGMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA 487
           CRD+L         G+A  +YT+MHLDLASLDSVRQFVD FRR+EMPLDVL+ NAA
Sbjct: 118 CRDYLKAARAAKSAGLAKENYTIMHLDLASLDSVRQFVDNFRRSEMPLDVLINNAA 173



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>POR_DAUCA (Q9SDT1) Protochlorophyllide reductase, chloroplast precursor (EC|
           1.3.1.33) (PCR) (NADPH-protochlorophyllide
           oxidoreductase) (POR)
          Length = 398

 Score =  122 bits (305), Expect = 7e-28
 Identities = 73/175 (41%), Positives = 92/175 (52%), Gaps = 14/175 (8%)
 Frame = +2

Query: 5   MALQ---LLPSTLSVPKKGSSMGAVAVKDTAAFLGV-----------SSKAKKASLAVRT 142
           MALQ    LPS+ S+ K+G +   V++K+T+ F GV           S + ++    +  
Sbjct: 1   MALQAASFLPSSFSINKEGKAN--VSLKETSLF-GVTFSDSLRTDFSSLRTRRGCRQISQ 57

Query: 143 QXXXXXXXXXXXXXXXXXXXXXKKTLRQGVVVITXXXXXXXXXXXXXXXETGKWHVVMAC 322
                                 KKTLR+G V+IT               ETGKWHV+MAC
Sbjct: 58  TGAIRSQAVATTPSVNRATGEGKKTLRKGSVIITGASSGLGLATAKALAETGKWHVIMAC 117

Query: 323 RDFLXXXXXXXXXGMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA 487
           RDFL         GM   +YT+MHLDLASLDSVRQFV+ FRR+E PLDVLVCNAA
Sbjct: 118 RDFLKAERAAKSAGMPKENYTIMHLDLASLDSVRQFVETFRRSERPLDVLVCNAA 172



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>PORA_CUCSA (Q41249) Protochlorophyllide reductase, chloroplast precursor (EC|
           1.3.1.33) (PCR) (NADPH-protochlorophyllide
           oxidoreductase) (POR)
          Length = 398

 Score =  119 bits (298), Expect = 4e-27
 Identities = 76/176 (43%), Positives = 95/176 (53%), Gaps = 15/176 (8%)
 Frame = +2

Query: 5   MALQ---LLPSTLSVPKKGSSMGAVAVKDTAAFLGVSS----KAKKASLAVRTQ------ 145
           MALQ   L+   LS+PK+G S  +V +KD++ F G+S     K++ +S  +R +      
Sbjct: 1   MALQAASLVSPALSIPKEGKS--SVCLKDSSLF-GISFSDHLKSEFSSSTLRCKRELNQQ 57

Query: 146 --XXXXXXXXXXXXXXXXXXXXXKKTLRQGVVVITXXXXXXXXXXXXXXXETGKWHVVMA 319
                                  KKTLR+G VVIT               ETGKWHV+MA
Sbjct: 58  IGAIRAQTTATESPAVNKATPDGKKTLRKGSVVITGASSGLGLATAKALAETGKWHVIMA 117

Query: 320 CRDFLXXXXXXXXXGMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA 487
           CRDFL         G+   +YTVMHLDLASLDSVRQFVD FR++  PLDVLVCNAA
Sbjct: 118 CRDFLKAERAAKSAGITKENYTVMHLDLASLDSVRQFVDNFRQSGRPLDVLVCNAA 173



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>PORB_ARATH (P21218) Protochlorophyllide reductase B, chloroplast precursor (EC|
           1.3.1.33) (PCR B) (NADPH-protochlorophyllide
           oxidoreductase B) (POR B)
          Length = 401

 Score =  115 bits (288), Expect = 6e-26
 Identities = 58/93 (62%), Positives = 62/93 (66%)
 Frame = +2

Query: 209 KKTLRQGVVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXXXGMADGSYTV 388
           KKTLR+G VV+T               ETGKW+V+MACRDFL         GM   SYTV
Sbjct: 83  KKTLRKGNVVVTGASSGLGLATAKALAETGKWNVIMACRDFLKAERAAKSVGMPKDSYTV 142

Query: 389 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA 487
           MHLDLASLDSVRQFVD FRR E PLDVLVCNAA
Sbjct: 143 MHLDLASLDSVRQFVDNFRRTETPLDVLVCNAA 175



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>PORB_HORVU (Q42850) Protochlorophyllide reductase B, chloroplast precursor (EC|
           1.3.1.33) (PCR B) (NADPH-protochlorophyllide
           oxidoreductase B) (POR B)
          Length = 395

 Score =  114 bits (285), Expect = 1e-25
 Identities = 66/169 (39%), Positives = 87/169 (51%), Gaps = 9/169 (5%)
 Frame = +2

Query: 8   ALQLLPSTLSVPKKGSSMGAV--------AVKDTAAFLGVSSK-AKKASLAVRTQXXXXX 160
           A   LPS LS  K+G++  +          +K  A  LG+ +K    +S+A+R Q     
Sbjct: 6   ATSFLPSALSARKEGAAKDSAFFGVRLADGLKLDATSLGLRTKRVNTSSVAIRAQAAAVS 65

Query: 161 XXXXXXXXXXXXXXXXKKTLRQGVVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXX 340
                           KKT+R G  +IT               E+GKWHV+MACRD+L  
Sbjct: 66  APTATPASPAG-----KKTVRTGNAIITGASSGLGLATAKALAESGKWHVIMACRDYLKT 120

Query: 341 XXXXXXXGMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA 487
                  GM  GSYT++HLDLASLDSVRQFV   R+ +MP+DV+VCNAA
Sbjct: 121 ARAARAAGMPKGSYTIVHLDLASLDSVRQFVKNVRQLDMPIDVVVCNAA 169



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>PORC_ARATH (O48741) Protochlorophyllide reductase C, chloroplast precursor (EC|
           1.3.1.33) (PCR C) (NADPH-protochlorophyllide
           oxidoreductase C) (POR C)
          Length = 401

 Score =  110 bits (276), Expect = 2e-24
 Identities = 70/174 (40%), Positives = 87/174 (50%), Gaps = 14/174 (8%)
 Frame = +2

Query: 8   ALQLLPSTLSVPKKGSSMGAVAVKDTAAFLGVSS----KAKKASLAV----------RTQ 145
           A  LLPST+S+ K+G    ++  K+T  F G S     +A+K S  +          R  
Sbjct: 6   AYSLLPSTISIQKEGKFNASL--KETT-FTGSSFSNHLRAEKISTLLTIKEQRRQKPRFS 62

Query: 146 XXXXXXXXXXXXXXXXXXXXXKKTLRQGVVVITXXXXXXXXXXXXXXXETGKWHVVMACR 325
                                KKT R+G  VIT               +TGKWHV+MACR
Sbjct: 63  TGIRAQTVTATPPANEASPEQKKTERKGTAVITGASSGLGLATAKALADTGKWHVIMACR 122

Query: 326 DFLXXXXXXXXXGMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA 487
           +FL         GM+   YTVMHLDLASL+SV+QFV+ FRR E PLDVLVCNAA
Sbjct: 123 NFLKAEKAARSVGMSKEDYTVMHLDLASLESVKQFVENFRRTEQPLDVLVCNAA 176



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>POR_MARPA (O80333) Protochlorophyllide reductase, chloroplast precursor (EC|
           1.3.1.33) (PCR) (NADPH-protochlorophyllide
           oxidoreductase) (POR)
          Length = 458

 Score = 96.7 bits (239), Expect = 3e-20
 Identities = 58/146 (39%), Positives = 70/146 (47%)
 Frame = +2

Query: 50  GSSMGAVAVKDTAAFLGVSSKAKKASLAVRTQXXXXXXXXXXXXXXXXXXXXXKKTLRQG 229
           G  MG VA K   A L VS+ A      ++++                     KKT  + 
Sbjct: 92  GLRMGEVA-KFGGALLSVSTVAAN----LKSKPGVLSVNAVTAPAETMNKPSSKKTATKS 146

Query: 230 VVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXXXGMADGSYTVMHLDLAS 409
             +IT               +TG+WHV+MACRDFL         G+   SYTV+H DLAS
Sbjct: 147 TCIITGASSGLGLATAKALADTGEWHVIMACRDFLKAERAARSVGIPKDSYTVIHCDLAS 206

Query: 410 LDSVRQFVDAFRRAEMPLDVLVCNAA 487
            DSVR FVD FRR E  LDVLVCNAA
Sbjct: 207 FDSVRAFVDNFRRTERQLDVLVCNAA 232



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>POR_CHLRE (Q39617) Protochlorophyllide reductase, chloroplast precursor (EC|
           1.3.1.33) (PCR) (NADPH-protochlorophyllide
           oxidoreductase) (POR)
          Length = 397

 Score = 86.3 bits (212), Expect = 4e-17
 Identities = 42/91 (46%), Positives = 53/91 (58%)
 Frame = +2

Query: 215 TLRQGVVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXXXGMADGSYTVMH 394
           T ++   +IT                TG+WHVVMACRDFL         GM  GSY+++H
Sbjct: 82  TQQKQTAIITGASSGLGLNAAKALAATGEWHVVMACRDFLKAEQAAKKVGMPAGSYSILH 141

Query: 395 LDLASLDSVRQFVDAFRRAEMPLDVLVCNAA 487
           LDL+SL+SVRQFV  F+ +   LD LVCNAA
Sbjct: 142 LDLSSLESVRQFVQNFKASGRRLDALVCNAA 172



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>POR_PLEBO (O66148) Light-dependent protochlorophyllide reductase (EC|
           1.3.1.33) (PCR) (NADPH-protochlorophyllide
           oxidoreductase) (POR) (LPOR)
          Length = 322

 Score = 75.1 bits (183), Expect = 9e-14
 Identities = 40/85 (47%), Positives = 47/85 (55%)
 Frame = +2

Query: 233 VVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXXXGMADGSYTVMHLDLASL 412
           VVIT               + G WHVVMACR+           GM+  SYT+MH+DL SL
Sbjct: 9   VVITGASSGVGLYAAKALVKRG-WHVVMACRNLEKADSAAKSLGMSPDSYTLMHIDLGSL 67

Query: 413 DSVRQFVDAFRRAEMPLDVLVCNAA 487
           DSVR+FV  FR +   LD LVCNAA
Sbjct: 68  DSVRKFVTQFRESGKSLDALVCNAA 92



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>POR_SYNY3 (Q59987) Light-dependent protochlorophyllide reductase (EC|
           1.3.1.33) (PCR) (NADPH-protochlorophyllide
           oxidoreductase) (POR) (LPOR)
          Length = 322

 Score = 63.5 bits (153), Expect = 3e-10
 Identities = 35/85 (41%), Positives = 42/85 (49%)
 Frame = +2

Query: 233 VVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXXXGMADGSYTVMHLDLASL 412
           V+IT               + G WHV+MACR+           G    SYT++ LDL  L
Sbjct: 9   VIITGASSGVGLYGAKALIDKG-WHVIMACRNLDKTQKVADELGFPKDSYTIIKLDLGYL 67

Query: 413 DSVRQFVDAFRRAEMPLDVLVCNAA 487
           DSVR+FV  FR    PL  LVCNAA
Sbjct: 68  DSVRRFVAQFRELGRPLKALVCNAA 92



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>WWOX_BRARE (Q803A8) WW domain-containing oxidoreductase (EC 1.1.1.-)|
          Length = 412

 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
 Frame = +2

Query: 305 HVVMACRDFLXXXXXXXXXGMADGSYT-----VMHLDLASLDSVRQFVDAFRRAEMPLDV 469
           HV++ACR+            +  G ++     V+ LDLASL SVRQF + F+  ++PL V
Sbjct: 147 HVILACRN---QSRASKAASLIMGEWSKARVEVLPLDLASLRSVRQFAELFKATKLPLHV 203

Query: 470 LVCNAA 487
           LVCNAA
Sbjct: 204 LVCNAA 209



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>WWOX_HUMAN (Q9NZC7) WW domain-containing oxidoreductase (EC 1.1.1.-) (Fragile|
           site FRA16D oxidoreductase)
          Length = 414

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = +2

Query: 305 HVVMACRDFLXXXXXXXXX--GMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVC 478
           HV++ACR+                      M LDLA L SV+ F +AF+   +PL VLVC
Sbjct: 150 HVILACRNMARASEAVSRILEEWHKAKVEAMTLDLALLRSVQHFAEAFKAKNVPLHVLVC 209

Query: 479 NAA 487
           NAA
Sbjct: 210 NAA 212



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>WWOX_CHICK (Q5F389) WW domain-containing oxidoreductase (EC 1.1.1.-)|
          Length = 414

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 21/33 (63%), Positives = 25/33 (75%)
 Frame = +2

Query: 389 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA 487
           M LDLASL SV+ F +AF+   MPL +LVCNAA
Sbjct: 180 MTLDLASLRSVQNFAEAFKSKNMPLHILVCNAA 212



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>WWOX_PONPY (Q5R9W5) WW domain-containing oxidoreductase (EC 1.1.1.-)|
          Length = 414

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
 Frame = +2

Query: 305 HVVMACRDFLXXXXXXXXX--GMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVC 478
           HV++ACR+                      + LDLA L SV+ F +AF+   +PL VLVC
Sbjct: 150 HVILACRNMARASEAVSRILEEWHKAKVEAVTLDLALLRSVQHFAEAFKAKNVPLHVLVC 209

Query: 479 NAA 487
           NAA
Sbjct: 210 NAA 212



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>WWOX_MOUSE (Q91WL8) WW domain-containing oxidoreductase (EC 1.1.1.-)|
          Length = 414

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
 Frame = +2

Query: 305 HVVMACRDFLXXXXXXXXX--GMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVC 478
           HV++ACR+                      M LDLA L SV+ F +AF+   + L VLVC
Sbjct: 150 HVILACRNLSRASEAVSRILEEWHKAKVEAMTLDLAVLRSVQHFAEAFKAKNVSLHVLVC 209

Query: 479 NA 484
           NA
Sbjct: 210 NA 211



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>DHRSX_HUMAN (Q8N5I4) Dehydrogenase/reductase SDR family member on chromosome X|
           precursor (EC 1.1.-.-) (DHRSXY)
          Length = 330

 Score = 37.0 bits (84), Expect = 0.028
 Identities = 16/32 (50%), Positives = 24/32 (75%)
 Frame = +2

Query: 389 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNA 484
           ++ DLAS+ S+RQFV  F+  ++PL VL+ NA
Sbjct: 99  LYCDLASMTSIRQFVQKFKMKKIPLHVLINNA 130



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>RDH14_MOUSE (Q9ERI6) Retinol dehydrogenase 14 (EC 1.1.1.-) (Alcohol|
           dehydrogenase PAN2)
          Length = 334

 Score = 35.8 bits (81), Expect = 0.063
 Identities = 20/38 (52%), Positives = 22/38 (57%)
 Frame = +2

Query: 371 DGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNA 484
           DG   V  LDLASL SVR F     + E  LDVL+ NA
Sbjct: 104 DGQLVVKELDLASLRSVRAFCQELLQEEPRLDVLINNA 141



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>RDH13_HUMAN (Q8NBN7) Retinol dehydrogenase 13 (EC 1.1.1.-)|
          Length = 331

 Score = 34.3 bits (77), Expect = 0.18
 Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 2/94 (2%)
 Frame = +2

Query: 209 KKTLRQGVVVITXXXXXXXXXXXXXXXETGKWHVVMACRDF--LXXXXXXXXXGMADGSY 382
           K T+    V++T                 G  ++++ACRD                +   
Sbjct: 33  KATIPGKTVIVTGANTGIGKQTALELARRGG-NIILACRDMEKCEAAAKDIRGETLNHHV 91

Query: 383 TVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNA 484
              HLDLASL S+R+F       E  +D+L+ NA
Sbjct: 92  NARHLDLASLKSIREFAAKIIEEEERVDILINNA 125



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>RDH14_HUMAN (Q9HBH5) Retinol dehydrogenase 14 (EC 1.1.1.-) (Alcohol|
           dehydrogenase PAN2)
          Length = 336

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 19/37 (51%), Positives = 21/37 (56%)
 Frame = +2

Query: 374 GSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNA 484
           G   V  LDLASL SVR F     + E  LDVL+ NA
Sbjct: 107 GELIVRELDLASLRSVRAFCQEMLQEEPRLDVLINNA 143



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>RDH13_MOUSE (Q8CEE7) Retinol dehydrogenase 13 (EC 1.1.1.-)|
          Length = 334

 Score = 33.1 bits (74), Expect = 0.41
 Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 2/95 (2%)
 Frame = +2

Query: 209 KKTLRQGVVVITXXXXXXXXXXXXXXXETGKWHVVMACRDF--LXXXXXXXXXGMADGSY 382
           K T+    V++T               + G  +V++ACRD                +   
Sbjct: 33  KATIPGKTVIVTGANTGIGKQTALELAKRGG-NVILACRDMEKCEVAAKDIRGETLNPRV 91

Query: 383 TVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA 487
               LDLASL S+R+F     + E  +D+LV NAA
Sbjct: 92  RAERLDLASLKSIREFARKVIKEEERVDILVNNAA 126



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>RDH12_HUMAN (Q96NR8) Retinol dehydrogenase 12 (EC 1.1.1.-) (All-trans and 9-cis|
           retinol dehydrogenase)
          Length = 316

 Score = 32.3 bits (72), Expect = 0.70
 Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
 Frame = +2

Query: 230 VVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXXXGM--ADGSYTVMHLDL 403
           VVVIT                 G   V +ACRD L          +   +    V  LDL
Sbjct: 41  VVVITGANTGIGKETARELASRGA-RVYIACRDVLKGESAASEIRVDTKNSQVLVRKLDL 99

Query: 404 ASLDSVRQFVDAFRRAEMPLDVLVCNA 484
           +   S+R F + F   E  L +L+ NA
Sbjct: 100 SDTKSIRAFAEGFLAEEKQLHILINNA 126



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>RDH12_BOVIN (P59837) Retinol dehydrogenase 12 (EC 1.1.1.-) (Double substrate|
           specificity short chain dehydrogenase/reductase 2)
          Length = 316

 Score = 32.3 bits (72), Expect = 0.70
 Identities = 25/87 (28%), Positives = 32/87 (36%), Gaps = 2/87 (2%)
 Frame = +2

Query: 230 VVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXX--XGMADGSYTVMHLDL 403
           VVVIT                 G   V +ACRD L              +    V  LDL
Sbjct: 41  VVVITGANTGIGKETARELARRGA-RVYIACRDVLKGESAASEIQADTKNSQVLVRKLDL 99

Query: 404 ASLDSVRQFVDAFRRAEMPLDVLVCNA 484
           +   S+R F + F   E  L +L+ NA
Sbjct: 100 SDTKSIRAFAEGFLAEEKQLHILINNA 126



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>DHRSX_MOUSE (Q8VBZ0) Dehydrogenase/reductase SDR family member on chromosome X|
           homolog precursor (EC 1.1.-.-) (SCAD family protein)
           (DHRSXY) (Fragment)
          Length = 280

 Score = 32.3 bits (72), Expect = 0.70
 Identities = 18/31 (58%), Positives = 21/31 (67%)
 Frame = +2

Query: 395 LDLASLDSVRQFVDAFRRAEMPLDVLVCNAA 487
           LDLASL SVR F   F+   +PL +LV NAA
Sbjct: 101 LDLASLASVRGFARDFQALGLPLHLLVNNAA 131



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>RDH12_MOUSE (Q8BYK4) Retinol dehydrogenase 12 (EC 1.1.1.-)|
          Length = 316

 Score = 32.0 bits (71), Expect = 0.91
 Identities = 25/87 (28%), Positives = 32/87 (36%), Gaps = 2/87 (2%)
 Frame = +2

Query: 230 VVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXX--XGMADGSYTVMHLDL 403
           VVVIT                 G   V +ACRD L              +    V  LDL
Sbjct: 41  VVVITGANTGIGKETARELARRGA-RVYIACRDVLKGESAASEIRADTKNSQVLVRKLDL 99

Query: 404 ASLDSVRQFVDAFRRAEMPLDVLVCNA 484
           +   S+R F + F   E  L +L+ NA
Sbjct: 100 SDTKSIRAFAERFLAEEKKLHILINNA 126



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>RDH11_HUMAN (Q8TC12) Retinol dehydrogenase 11 (EC 1.1.1.-) (Retinal reductase|
           1) (RalR1) (Prostate short-chain dehydrogenase/reductase
           1) (Androgen-regulated short-chain
           dehydrogenase/reductase 1) (HCV core-binding protein
           HCBP12)
          Length = 318

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 2/87 (2%)
 Frame = +2

Query: 230 VVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXXXGMADGSYTVM--HLDL 403
           VVV+T               + G   V +ACRD               G+  V+   LDL
Sbjct: 43  VVVVTGANTGIGKETAKELAQRGA-RVYLACRDVEKGELVAKEIQTTTGNQQVLVRKLDL 101

Query: 404 ASLDSVRQFVDAFRRAEMPLDVLVCNA 484
           +   S+R F   F   E  L VL+ NA
Sbjct: 102 SDTKSIRAFAKGFLAEEKHLHVLINNA 128



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>ICAM5_MOUSE (Q60625) Intercellular adhesion molecule 5 precursor (ICAM-5)|
           (Telencephalin)
          Length = 917

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -1

Query: 228 PCRSVFLPLGDDAVEPGLVVTGEGAVATCVLTAS 127
           P   V+L LGD  + P + + G+  VAT   TAS
Sbjct: 258 PEAGVYLSLGDQRLNPNVTLDGDSLVATATATAS 291



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>YHIM_ECOLI (P37630) Inner membrane protein yhiM|
          Length = 364

 Score = 30.4 bits (67), Expect = 2.7
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = -1

Query: 195 DAVEPGLVVTGEGAVATCVLTASDAFFALLLTPRNAAVSFTATAPM 58
           D    G V+ G G +A CV T + +    LL P+NAA S +   P+
Sbjct: 117 DEFVAGHVIFGVGMIAACVSTVAASSGHFLLIPKNAAGSKSDGTPV 162



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>CASK_CAMDR (P79139) Kappa-casein precursor|
          Length = 182

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -1

Query: 189 VEPGLVVTGEGAVATCVLTASDAFFALLLTPRNAAVSFTAT 67
           VEP ++ T E AV T V+  + + F    TP    V  T+T
Sbjct: 140 VEPPVIPTAEPAVNTVVIAEASSEFITTSTPETTTVQITST 180



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>CNX1_ARATH (Q39054) Molybdopterin biosynthesis CNX1 protein (Molybdenum|
           cofactor biosynthesis enzyme CNX1)
          Length = 670

 Score = 29.6 bits (65), Expect = 4.5
 Identities = 20/42 (47%), Positives = 26/42 (61%)
 Frame = +2

Query: 8   ALQLLPSTLSVPKKGSSMGAVAVKDTAAFLGVSSKAKKASLA 133
           AL  LP+T +V   GSS+ A+ V D +AF    S  KKASL+
Sbjct: 411 ALLELPATGNVLSAGSSVSAIIVSDISAF----SIDKKASLS 448



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>WWOX_DROME (Q9VLU5) WW domain-containing oxidoreductase (EC 1.1.1.-)|
          Length = 409

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 13/30 (43%), Positives = 22/30 (73%)
 Frame = +2

Query: 395 LDLASLDSVRQFVDAFRRAEMPLDVLVCNA 484
           LDL+SL SV++FV+  +++   +D L+ NA
Sbjct: 181 LDLSSLRSVQRFVEEIKQSVSHIDYLILNA 210



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>ICAM5_HUMAN (Q9UMF0) Intercellular adhesion molecule 5 precursor (ICAM-5)|
           (Telencephalin)
          Length = 924

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -1

Query: 216 VFLPLGDDAVEPGLVVTGEGAVATCVLTAS 127
           V+L LGD  + P + + G+  VAT   TAS
Sbjct: 262 VYLALGDQNLSPDVTLEGDAFVATATATAS 291


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,528,869
Number of Sequences: 219361
Number of extensions: 268552
Number of successful extensions: 1224
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1221
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3420806017
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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