| Clone Name | bast01b09 |
|---|---|
| Clone Library Name | barley_pub |
>PORA_HORVU (P13653) Protochlorophyllide reductase A, chloroplast precursor (EC| 1.3.1.33) (PCR A) (NADPH-protochlorophyllide oxidoreductase A) (POR A) Length = 388 Score = 216 bits (551), Expect = 2e-56 Identities = 116/161 (72%), Positives = 116/161 (72%) Frame = +2 Query: 5 MALQLLPSTLSVPKKGSSMGAVAVKDTAAFLGVSSKAKKASLAVRTQXXXXXXXXXXXXX 184 MALQLLPSTLSVPKKGSSMGAVAVKDTAAFLGVSSKAKKASLAVRTQ Sbjct: 1 MALQLLPSTLSVPKKGSSMGAVAVKDTAAFLGVSSKAKKASLAVRTQVATAPSPVTTSPG 60 Query: 185 XXXXXXXXKKTLRQGVVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXXXG 364 KKTLRQGVVVIT ETGKWHVVMACRDFL G Sbjct: 61 STASSPSGKKTLRQGVVVITGASSGLGLAAAKALAETGKWHVVMACRDFLKASKAAKAAG 120 Query: 365 MADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA 487 MADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA Sbjct: 121 MADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA 161
>PORA_WHEAT (Q41578) Protochlorophyllide reductase A, chloroplast precursor (EC| 1.3.1.33) (PCR A) (NADPH-protochlorophyllide oxidoreductase A) (POR A) Length = 388 Score = 215 bits (548), Expect = 4e-56 Identities = 115/161 (71%), Positives = 115/161 (71%) Frame = +2 Query: 5 MALQLLPSTLSVPKKGSSMGAVAVKDTAAFLGVSSKAKKASLAVRTQXXXXXXXXXXXXX 184 MALQLLPSTLSVPKKGSSMGA AVKDTAAFLGVSSKAKKASLAVRTQ Sbjct: 1 MALQLLPSTLSVPKKGSSMGAAAVKDTAAFLGVSSKAKKASLAVRTQVATAPSSVTTSPG 60 Query: 185 XXXXXXXXKKTLRQGVVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXXXG 364 KKTLRQGVVVIT ETGKWHVVMACRDFL G Sbjct: 61 SATAKPSGKKTLRQGVVVITGASSGLGLAAAKALAETGKWHVVMACRDFLKASKAAKAAG 120 Query: 365 MADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA 487 MADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA Sbjct: 121 MADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA 161
>POR_AVESA (P15904) Protochlorophyllide reductase (EC 1.3.1.33) (PCR)| (NADPH-protochlorophyllide oxidoreductase) (POR) (Fragment) Length = 313 Score = 124 bits (310), Expect = 2e-28 Identities = 62/86 (72%), Positives = 62/86 (72%) Frame = +2 Query: 230 VVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXXXGMADGSYTVMHLDLAS 409 VVVIT ETGKWHVVMACRDFL GMADGSYTVMHLDLAS Sbjct: 1 VVVITGASSGLGLAAAKALAETGKWHVVMACRDFLKASKAAKAAGMADGSYTVMHLDLAS 60 Query: 410 LDSVRQFVDAFRRAEMPLDVLVCNAA 487 LDSVRQFVDAFRRAEMPLDVLVCNAA Sbjct: 61 LDSVRQFVDAFRRAEMPLDVLVCNAA 86
>PORA_ARATH (Q42536) Protochlorophyllide reductase A, chloroplast precursor (EC| 1.3.1.33) (PCR A) (NADPH-protochlorophyllide oxidoreductase A) (POR A) Length = 405 Score = 123 bits (308), Expect = 3e-28 Identities = 79/179 (44%), Positives = 93/179 (51%), Gaps = 18/179 (10%) Frame = +2 Query: 5 MALQ---LLPSTLSVPKKG--SSMGAVAVKDTAAF---LGVSSKAKKASLAVRTQXXXXX 160 MALQ L+ S SV K G ++ + + K+++ F L SKA S ++R + Sbjct: 1 MALQAASLVSSAFSVRKDGKLNASASSSFKESSLFGVSLSEQSKADFVSSSLRCKREQSL 60 Query: 161 ----------XXXXXXXXXXXXXXXXKKTLRQGVVVITXXXXXXXXXXXXXXXETGKWHV 310 KKTLR+G VV+T ETGKWHV Sbjct: 61 RNNKAIIRAQAIATSTPSVTKSSLDRKKTLRKGNVVVTGASSGLGLATAKALAETGKWHV 120 Query: 311 VMACRDFLXXXXXXXXXGMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA 487 +MACRDFL GM SYTVMHLDLASLDSVRQFVD FRRAEMPLDVLVCNAA Sbjct: 121 IMACRDFLKAERAAQSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRAEMPLDVLVCNAA 179
>POR_PEA (Q01289) Protochlorophyllide reductase, chloroplast precursor (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) Length = 399 Score = 122 bits (306), Expect = 5e-28 Identities = 78/176 (44%), Positives = 98/176 (55%), Gaps = 15/176 (8%) Frame = +2 Query: 5 MALQ---LLPSTLSVPKKGSSMGAVAVKDTAAFLGVSS-----KAKKASLAVRTQ----- 145 MALQ +LP++ S+PK+G +GA ++KD+ F GVSS K S A+R + Sbjct: 1 MALQTASMLPASFSIPKEGK-IGA-SLKDSTLF-GVSSLSDSLKGDFTSSALRCKELRQK 57 Query: 146 --XXXXXXXXXXXXXXXXXXXXXKKTLRQGVVVITXXXXXXXXXXXXXXXETGKWHVVMA 319 KKTLR+G VVIT E+GKWHV+MA Sbjct: 58 VGAVRAETAAPATPAVNKSSSEGKKTLRKGNVVITGASSGLGLATAKALAESGKWHVIMA 117 Query: 320 CRDFLXXXXXXXXXGMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA 487 CRD+L G+A +YT+MHLDLASLDSVRQFVD FRR+EMPLDVL+ NAA Sbjct: 118 CRDYLKAARAAKSAGLAKENYTIMHLDLASLDSVRQFVDNFRRSEMPLDVLINNAA 173
>POR_DAUCA (Q9SDT1) Protochlorophyllide reductase, chloroplast precursor (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) Length = 398 Score = 122 bits (305), Expect = 7e-28 Identities = 73/175 (41%), Positives = 92/175 (52%), Gaps = 14/175 (8%) Frame = +2 Query: 5 MALQ---LLPSTLSVPKKGSSMGAVAVKDTAAFLGV-----------SSKAKKASLAVRT 142 MALQ LPS+ S+ K+G + V++K+T+ F GV S + ++ + Sbjct: 1 MALQAASFLPSSFSINKEGKAN--VSLKETSLF-GVTFSDSLRTDFSSLRTRRGCRQISQ 57 Query: 143 QXXXXXXXXXXXXXXXXXXXXXKKTLRQGVVVITXXXXXXXXXXXXXXXETGKWHVVMAC 322 KKTLR+G V+IT ETGKWHV+MAC Sbjct: 58 TGAIRSQAVATTPSVNRATGEGKKTLRKGSVIITGASSGLGLATAKALAETGKWHVIMAC 117 Query: 323 RDFLXXXXXXXXXGMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA 487 RDFL GM +YT+MHLDLASLDSVRQFV+ FRR+E PLDVLVCNAA Sbjct: 118 RDFLKAERAAKSAGMPKENYTIMHLDLASLDSVRQFVETFRRSERPLDVLVCNAA 172
>PORA_CUCSA (Q41249) Protochlorophyllide reductase, chloroplast precursor (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) Length = 398 Score = 119 bits (298), Expect = 4e-27 Identities = 76/176 (43%), Positives = 95/176 (53%), Gaps = 15/176 (8%) Frame = +2 Query: 5 MALQ---LLPSTLSVPKKGSSMGAVAVKDTAAFLGVSS----KAKKASLAVRTQ------ 145 MALQ L+ LS+PK+G S +V +KD++ F G+S K++ +S +R + Sbjct: 1 MALQAASLVSPALSIPKEGKS--SVCLKDSSLF-GISFSDHLKSEFSSSTLRCKRELNQQ 57 Query: 146 --XXXXXXXXXXXXXXXXXXXXXKKTLRQGVVVITXXXXXXXXXXXXXXXETGKWHVVMA 319 KKTLR+G VVIT ETGKWHV+MA Sbjct: 58 IGAIRAQTTATESPAVNKATPDGKKTLRKGSVVITGASSGLGLATAKALAETGKWHVIMA 117 Query: 320 CRDFLXXXXXXXXXGMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA 487 CRDFL G+ +YTVMHLDLASLDSVRQFVD FR++ PLDVLVCNAA Sbjct: 118 CRDFLKAERAAKSAGITKENYTVMHLDLASLDSVRQFVDNFRQSGRPLDVLVCNAA 173
>PORB_ARATH (P21218) Protochlorophyllide reductase B, chloroplast precursor (EC| 1.3.1.33) (PCR B) (NADPH-protochlorophyllide oxidoreductase B) (POR B) Length = 401 Score = 115 bits (288), Expect = 6e-26 Identities = 58/93 (62%), Positives = 62/93 (66%) Frame = +2 Query: 209 KKTLRQGVVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXXXGMADGSYTV 388 KKTLR+G VV+T ETGKW+V+MACRDFL GM SYTV Sbjct: 83 KKTLRKGNVVVTGASSGLGLATAKALAETGKWNVIMACRDFLKAERAAKSVGMPKDSYTV 142 Query: 389 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA 487 MHLDLASLDSVRQFVD FRR E PLDVLVCNAA Sbjct: 143 MHLDLASLDSVRQFVDNFRRTETPLDVLVCNAA 175
>PORB_HORVU (Q42850) Protochlorophyllide reductase B, chloroplast precursor (EC| 1.3.1.33) (PCR B) (NADPH-protochlorophyllide oxidoreductase B) (POR B) Length = 395 Score = 114 bits (285), Expect = 1e-25 Identities = 66/169 (39%), Positives = 87/169 (51%), Gaps = 9/169 (5%) Frame = +2 Query: 8 ALQLLPSTLSVPKKGSSMGAV--------AVKDTAAFLGVSSK-AKKASLAVRTQXXXXX 160 A LPS LS K+G++ + +K A LG+ +K +S+A+R Q Sbjct: 6 ATSFLPSALSARKEGAAKDSAFFGVRLADGLKLDATSLGLRTKRVNTSSVAIRAQAAAVS 65 Query: 161 XXXXXXXXXXXXXXXXKKTLRQGVVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXX 340 KKT+R G +IT E+GKWHV+MACRD+L Sbjct: 66 APTATPASPAG-----KKTVRTGNAIITGASSGLGLATAKALAESGKWHVIMACRDYLKT 120 Query: 341 XXXXXXXGMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA 487 GM GSYT++HLDLASLDSVRQFV R+ +MP+DV+VCNAA Sbjct: 121 ARAARAAGMPKGSYTIVHLDLASLDSVRQFVKNVRQLDMPIDVVVCNAA 169
>PORC_ARATH (O48741) Protochlorophyllide reductase C, chloroplast precursor (EC| 1.3.1.33) (PCR C) (NADPH-protochlorophyllide oxidoreductase C) (POR C) Length = 401 Score = 110 bits (276), Expect = 2e-24 Identities = 70/174 (40%), Positives = 87/174 (50%), Gaps = 14/174 (8%) Frame = +2 Query: 8 ALQLLPSTLSVPKKGSSMGAVAVKDTAAFLGVSS----KAKKASLAV----------RTQ 145 A LLPST+S+ K+G ++ K+T F G S +A+K S + R Sbjct: 6 AYSLLPSTISIQKEGKFNASL--KETT-FTGSSFSNHLRAEKISTLLTIKEQRRQKPRFS 62 Query: 146 XXXXXXXXXXXXXXXXXXXXXKKTLRQGVVVITXXXXXXXXXXXXXXXETGKWHVVMACR 325 KKT R+G VIT +TGKWHV+MACR Sbjct: 63 TGIRAQTVTATPPANEASPEQKKTERKGTAVITGASSGLGLATAKALADTGKWHVIMACR 122 Query: 326 DFLXXXXXXXXXGMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA 487 +FL GM+ YTVMHLDLASL+SV+QFV+ FRR E PLDVLVCNAA Sbjct: 123 NFLKAEKAARSVGMSKEDYTVMHLDLASLESVKQFVENFRRTEQPLDVLVCNAA 176
>POR_MARPA (O80333) Protochlorophyllide reductase, chloroplast precursor (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) Length = 458 Score = 96.7 bits (239), Expect = 3e-20 Identities = 58/146 (39%), Positives = 70/146 (47%) Frame = +2 Query: 50 GSSMGAVAVKDTAAFLGVSSKAKKASLAVRTQXXXXXXXXXXXXXXXXXXXXXKKTLRQG 229 G MG VA K A L VS+ A ++++ KKT + Sbjct: 92 GLRMGEVA-KFGGALLSVSTVAAN----LKSKPGVLSVNAVTAPAETMNKPSSKKTATKS 146 Query: 230 VVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXXXGMADGSYTVMHLDLAS 409 +IT +TG+WHV+MACRDFL G+ SYTV+H DLAS Sbjct: 147 TCIITGASSGLGLATAKALADTGEWHVIMACRDFLKAERAARSVGIPKDSYTVIHCDLAS 206 Query: 410 LDSVRQFVDAFRRAEMPLDVLVCNAA 487 DSVR FVD FRR E LDVLVCNAA Sbjct: 207 FDSVRAFVDNFRRTERQLDVLVCNAA 232
>POR_CHLRE (Q39617) Protochlorophyllide reductase, chloroplast precursor (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) Length = 397 Score = 86.3 bits (212), Expect = 4e-17 Identities = 42/91 (46%), Positives = 53/91 (58%) Frame = +2 Query: 215 TLRQGVVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXXXGMADGSYTVMH 394 T ++ +IT TG+WHVVMACRDFL GM GSY+++H Sbjct: 82 TQQKQTAIITGASSGLGLNAAKALAATGEWHVVMACRDFLKAEQAAKKVGMPAGSYSILH 141 Query: 395 LDLASLDSVRQFVDAFRRAEMPLDVLVCNAA 487 LDL+SL+SVRQFV F+ + LD LVCNAA Sbjct: 142 LDLSSLESVRQFVQNFKASGRRLDALVCNAA 172
>POR_PLEBO (O66148) Light-dependent protochlorophyllide reductase (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) (LPOR) Length = 322 Score = 75.1 bits (183), Expect = 9e-14 Identities = 40/85 (47%), Positives = 47/85 (55%) Frame = +2 Query: 233 VVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXXXGMADGSYTVMHLDLASL 412 VVIT + G WHVVMACR+ GM+ SYT+MH+DL SL Sbjct: 9 VVITGASSGVGLYAAKALVKRG-WHVVMACRNLEKADSAAKSLGMSPDSYTLMHIDLGSL 67 Query: 413 DSVRQFVDAFRRAEMPLDVLVCNAA 487 DSVR+FV FR + LD LVCNAA Sbjct: 68 DSVRKFVTQFRESGKSLDALVCNAA 92
>POR_SYNY3 (Q59987) Light-dependent protochlorophyllide reductase (EC| 1.3.1.33) (PCR) (NADPH-protochlorophyllide oxidoreductase) (POR) (LPOR) Length = 322 Score = 63.5 bits (153), Expect = 3e-10 Identities = 35/85 (41%), Positives = 42/85 (49%) Frame = +2 Query: 233 VVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXXXGMADGSYTVMHLDLASL 412 V+IT + G WHV+MACR+ G SYT++ LDL L Sbjct: 9 VIITGASSGVGLYGAKALIDKG-WHVIMACRNLDKTQKVADELGFPKDSYTIIKLDLGYL 67 Query: 413 DSVRQFVDAFRRAEMPLDVLVCNAA 487 DSVR+FV FR PL LVCNAA Sbjct: 68 DSVRRFVAQFRELGRPLKALVCNAA 92
>WWOX_BRARE (Q803A8) WW domain-containing oxidoreductase (EC 1.1.1.-)| Length = 412 Score = 50.1 bits (118), Expect = 3e-06 Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 5/66 (7%) Frame = +2 Query: 305 HVVMACRDFLXXXXXXXXXGMADGSYT-----VMHLDLASLDSVRQFVDAFRRAEMPLDV 469 HV++ACR+ + G ++ V+ LDLASL SVRQF + F+ ++PL V Sbjct: 147 HVILACRN---QSRASKAASLIMGEWSKARVEVLPLDLASLRSVRQFAELFKATKLPLHV 203 Query: 470 LVCNAA 487 LVCNAA Sbjct: 204 LVCNAA 209
>WWOX_HUMAN (Q9NZC7) WW domain-containing oxidoreductase (EC 1.1.1.-) (Fragile| site FRA16D oxidoreductase) Length = 414 Score = 44.3 bits (103), Expect = 2e-04 Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 2/63 (3%) Frame = +2 Query: 305 HVVMACRDFLXXXXXXXXX--GMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVC 478 HV++ACR+ M LDLA L SV+ F +AF+ +PL VLVC Sbjct: 150 HVILACRNMARASEAVSRILEEWHKAKVEAMTLDLALLRSVQHFAEAFKAKNVPLHVLVC 209 Query: 479 NAA 487 NAA Sbjct: 210 NAA 212
>WWOX_CHICK (Q5F389) WW domain-containing oxidoreductase (EC 1.1.1.-)| Length = 414 Score = 44.3 bits (103), Expect = 2e-04 Identities = 21/33 (63%), Positives = 25/33 (75%) Frame = +2 Query: 389 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA 487 M LDLASL SV+ F +AF+ MPL +LVCNAA Sbjct: 180 MTLDLASLRSVQNFAEAFKSKNMPLHILVCNAA 212
>WWOX_PONPY (Q5R9W5) WW domain-containing oxidoreductase (EC 1.1.1.-)| Length = 414 Score = 42.7 bits (99), Expect = 5e-04 Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%) Frame = +2 Query: 305 HVVMACRDFLXXXXXXXXX--GMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVC 478 HV++ACR+ + LDLA L SV+ F +AF+ +PL VLVC Sbjct: 150 HVILACRNMARASEAVSRILEEWHKAKVEAVTLDLALLRSVQHFAEAFKAKNVPLHVLVC 209 Query: 479 NAA 487 NAA Sbjct: 210 NAA 212
>WWOX_MOUSE (Q91WL8) WW domain-containing oxidoreductase (EC 1.1.1.-)| Length = 414 Score = 39.3 bits (90), Expect = 0.006 Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 2/62 (3%) Frame = +2 Query: 305 HVVMACRDFLXXXXXXXXX--GMADGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVC 478 HV++ACR+ M LDLA L SV+ F +AF+ + L VLVC Sbjct: 150 HVILACRNLSRASEAVSRILEEWHKAKVEAMTLDLAVLRSVQHFAEAFKAKNVSLHVLVC 209 Query: 479 NA 484 NA Sbjct: 210 NA 211
>DHRSX_HUMAN (Q8N5I4) Dehydrogenase/reductase SDR family member on chromosome X| precursor (EC 1.1.-.-) (DHRSXY) Length = 330 Score = 37.0 bits (84), Expect = 0.028 Identities = 16/32 (50%), Positives = 24/32 (75%) Frame = +2 Query: 389 MHLDLASLDSVRQFVDAFRRAEMPLDVLVCNA 484 ++ DLAS+ S+RQFV F+ ++PL VL+ NA Sbjct: 99 LYCDLASMTSIRQFVQKFKMKKIPLHVLINNA 130
>RDH14_MOUSE (Q9ERI6) Retinol dehydrogenase 14 (EC 1.1.1.-) (Alcohol| dehydrogenase PAN2) Length = 334 Score = 35.8 bits (81), Expect = 0.063 Identities = 20/38 (52%), Positives = 22/38 (57%) Frame = +2 Query: 371 DGSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNA 484 DG V LDLASL SVR F + E LDVL+ NA Sbjct: 104 DGQLVVKELDLASLRSVRAFCQELLQEEPRLDVLINNA 141
>RDH13_HUMAN (Q8NBN7) Retinol dehydrogenase 13 (EC 1.1.1.-)| Length = 331 Score = 34.3 bits (77), Expect = 0.18 Identities = 24/94 (25%), Positives = 37/94 (39%), Gaps = 2/94 (2%) Frame = +2 Query: 209 KKTLRQGVVVITXXXXXXXXXXXXXXXETGKWHVVMACRDF--LXXXXXXXXXGMADGSY 382 K T+ V++T G ++++ACRD + Sbjct: 33 KATIPGKTVIVTGANTGIGKQTALELARRGG-NIILACRDMEKCEAAAKDIRGETLNHHV 91 Query: 383 TVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNA 484 HLDLASL S+R+F E +D+L+ NA Sbjct: 92 NARHLDLASLKSIREFAAKIIEEEERVDILINNA 125
>RDH14_HUMAN (Q9HBH5) Retinol dehydrogenase 14 (EC 1.1.1.-) (Alcohol| dehydrogenase PAN2) Length = 336 Score = 33.1 bits (74), Expect = 0.41 Identities = 19/37 (51%), Positives = 21/37 (56%) Frame = +2 Query: 374 GSYTVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNA 484 G V LDLASL SVR F + E LDVL+ NA Sbjct: 107 GELIVRELDLASLRSVRAFCQEMLQEEPRLDVLINNA 143
>RDH13_MOUSE (Q8CEE7) Retinol dehydrogenase 13 (EC 1.1.1.-)| Length = 334 Score = 33.1 bits (74), Expect = 0.41 Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 2/95 (2%) Frame = +2 Query: 209 KKTLRQGVVVITXXXXXXXXXXXXXXXETGKWHVVMACRDF--LXXXXXXXXXGMADGSY 382 K T+ V++T + G +V++ACRD + Sbjct: 33 KATIPGKTVIVTGANTGIGKQTALELAKRGG-NVILACRDMEKCEVAAKDIRGETLNPRV 91 Query: 383 TVMHLDLASLDSVRQFVDAFRRAEMPLDVLVCNAA 487 LDLASL S+R+F + E +D+LV NAA Sbjct: 92 RAERLDLASLKSIREFARKVIKEEERVDILVNNAA 126
>RDH12_HUMAN (Q96NR8) Retinol dehydrogenase 12 (EC 1.1.1.-) (All-trans and 9-cis| retinol dehydrogenase) Length = 316 Score = 32.3 bits (72), Expect = 0.70 Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 2/87 (2%) Frame = +2 Query: 230 VVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXXXGM--ADGSYTVMHLDL 403 VVVIT G V +ACRD L + + V LDL Sbjct: 41 VVVITGANTGIGKETARELASRGA-RVYIACRDVLKGESAASEIRVDTKNSQVLVRKLDL 99 Query: 404 ASLDSVRQFVDAFRRAEMPLDVLVCNA 484 + S+R F + F E L +L+ NA Sbjct: 100 SDTKSIRAFAEGFLAEEKQLHILINNA 126
>RDH12_BOVIN (P59837) Retinol dehydrogenase 12 (EC 1.1.1.-) (Double substrate| specificity short chain dehydrogenase/reductase 2) Length = 316 Score = 32.3 bits (72), Expect = 0.70 Identities = 25/87 (28%), Positives = 32/87 (36%), Gaps = 2/87 (2%) Frame = +2 Query: 230 VVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXX--XGMADGSYTVMHLDL 403 VVVIT G V +ACRD L + V LDL Sbjct: 41 VVVITGANTGIGKETARELARRGA-RVYIACRDVLKGESAASEIQADTKNSQVLVRKLDL 99 Query: 404 ASLDSVRQFVDAFRRAEMPLDVLVCNA 484 + S+R F + F E L +L+ NA Sbjct: 100 SDTKSIRAFAEGFLAEEKQLHILINNA 126
>DHRSX_MOUSE (Q8VBZ0) Dehydrogenase/reductase SDR family member on chromosome X| homolog precursor (EC 1.1.-.-) (SCAD family protein) (DHRSXY) (Fragment) Length = 280 Score = 32.3 bits (72), Expect = 0.70 Identities = 18/31 (58%), Positives = 21/31 (67%) Frame = +2 Query: 395 LDLASLDSVRQFVDAFRRAEMPLDVLVCNAA 487 LDLASL SVR F F+ +PL +LV NAA Sbjct: 101 LDLASLASVRGFARDFQALGLPLHLLVNNAA 131
>RDH12_MOUSE (Q8BYK4) Retinol dehydrogenase 12 (EC 1.1.1.-)| Length = 316 Score = 32.0 bits (71), Expect = 0.91 Identities = 25/87 (28%), Positives = 32/87 (36%), Gaps = 2/87 (2%) Frame = +2 Query: 230 VVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXX--XGMADGSYTVMHLDL 403 VVVIT G V +ACRD L + V LDL Sbjct: 41 VVVITGANTGIGKETARELARRGA-RVYIACRDVLKGESAASEIRADTKNSQVLVRKLDL 99 Query: 404 ASLDSVRQFVDAFRRAEMPLDVLVCNA 484 + S+R F + F E L +L+ NA Sbjct: 100 SDTKSIRAFAERFLAEEKKLHILINNA 126
>RDH11_HUMAN (Q8TC12) Retinol dehydrogenase 11 (EC 1.1.1.-) (Retinal reductase| 1) (RalR1) (Prostate short-chain dehydrogenase/reductase 1) (Androgen-regulated short-chain dehydrogenase/reductase 1) (HCV core-binding protein HCBP12) Length = 318 Score = 30.8 bits (68), Expect = 2.0 Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 2/87 (2%) Frame = +2 Query: 230 VVVITXXXXXXXXXXXXXXXETGKWHVVMACRDFLXXXXXXXXXGMADGSYTVM--HLDL 403 VVV+T + G V +ACRD G+ V+ LDL Sbjct: 43 VVVVTGANTGIGKETAKELAQRGA-RVYLACRDVEKGELVAKEIQTTTGNQQVLVRKLDL 101 Query: 404 ASLDSVRQFVDAFRRAEMPLDVLVCNA 484 + S+R F F E L VL+ NA Sbjct: 102 SDTKSIRAFAKGFLAEEKHLHVLINNA 128
>ICAM5_MOUSE (Q60625) Intercellular adhesion molecule 5 precursor (ICAM-5)| (Telencephalin) Length = 917 Score = 30.8 bits (68), Expect = 2.0 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -1 Query: 228 PCRSVFLPLGDDAVEPGLVVTGEGAVATCVLTAS 127 P V+L LGD + P + + G+ VAT TAS Sbjct: 258 PEAGVYLSLGDQRLNPNVTLDGDSLVATATATAS 291
>YHIM_ECOLI (P37630) Inner membrane protein yhiM| Length = 364 Score = 30.4 bits (67), Expect = 2.7 Identities = 17/46 (36%), Positives = 24/46 (52%) Frame = -1 Query: 195 DAVEPGLVVTGEGAVATCVLTASDAFFALLLTPRNAAVSFTATAPM 58 D G V+ G G +A CV T + + LL P+NAA S + P+ Sbjct: 117 DEFVAGHVIFGVGMIAACVSTVAASSGHFLLIPKNAAGSKSDGTPV 162
>CASK_CAMDR (P79139) Kappa-casein precursor| Length = 182 Score = 30.0 bits (66), Expect = 3.5 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = -1 Query: 189 VEPGLVVTGEGAVATCVLTASDAFFALLLTPRNAAVSFTAT 67 VEP ++ T E AV T V+ + + F TP V T+T Sbjct: 140 VEPPVIPTAEPAVNTVVIAEASSEFITTSTPETTTVQITST 180
>CNX1_ARATH (Q39054) Molybdopterin biosynthesis CNX1 protein (Molybdenum| cofactor biosynthesis enzyme CNX1) Length = 670 Score = 29.6 bits (65), Expect = 4.5 Identities = 20/42 (47%), Positives = 26/42 (61%) Frame = +2 Query: 8 ALQLLPSTLSVPKKGSSMGAVAVKDTAAFLGVSSKAKKASLA 133 AL LP+T +V GSS+ A+ V D +AF S KKASL+ Sbjct: 411 ALLELPATGNVLSAGSSVSAIIVSDISAF----SIDKKASLS 448
>WWOX_DROME (Q9VLU5) WW domain-containing oxidoreductase (EC 1.1.1.-)| Length = 409 Score = 29.3 bits (64), Expect = 5.9 Identities = 13/30 (43%), Positives = 22/30 (73%) Frame = +2 Query: 395 LDLASLDSVRQFVDAFRRAEMPLDVLVCNA 484 LDL+SL SV++FV+ +++ +D L+ NA Sbjct: 181 LDLSSLRSVQRFVEEIKQSVSHIDYLILNA 210
>ICAM5_HUMAN (Q9UMF0) Intercellular adhesion molecule 5 precursor (ICAM-5)| (Telencephalin) Length = 924 Score = 28.9 bits (63), Expect = 7.7 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -1 Query: 216 VFLPLGDDAVEPGLVVTGEGAVATCVLTAS 127 V+L LGD + P + + G+ VAT TAS Sbjct: 262 VYLALGDQNLSPDVTLEGDAFVATATATAS 291 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,528,869 Number of Sequences: 219361 Number of extensions: 268552 Number of successful extensions: 1224 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 1216 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1221 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3420806017 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)