ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast01b01 |
|---|---|
| Clone Library Name | barley_pub |
>SOX_ARATH (Q9SJA7) Probable sarcosine oxidase (EC 1.5.3.1)| Length = 416 Score = 69.7 bits (169), Expect = 3e-12 Identities = 38/101 (37%), Positives = 47/101 (46%) Frame = +1 Query: 100 FDVIVVXXXXXXXXXXXXXXXXXXXVLLLERFDLLHQRGSSHGESXXXXXXXXXXXXXXM 279 FDVIVV LLLE+FD LH RGSSHGES M Sbjct: 9 FDVIVVGAGVMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYYSM 68 Query: 280 VRLAHRLWHDAERDAGYTVLTPTPHLDLGPRDGPAFVAAIA 402 V + RLW A+ + GY V PT D+GP D + ++ +A Sbjct: 69 VSESTRLWAAAQSEIGYKVHFPTQQFDMGPADQQSLLSVVA 109
>SOX_MOUSE (Q9D826) Peroxisomal sarcosine oxidase (EC 1.5.3.1) (PSO)| (L-pipecolate oxidase) (EC 1.5.3.7) (L-pipecolic acid oxidase) Length = 390 Score = 48.9 bits (115), Expect = 6e-06 Identities = 29/94 (30%), Positives = 41/94 (43%) Frame = +1 Query: 100 FDVIVVXXXXXXXXXXXXXXXXXXXVLLLERFDLLHQRGSSHGESXXXXXXXXXXXXXXM 279 +D IV+ VLLLE+F L H RGSSHG+S M Sbjct: 8 WDAIVIGAGIQGCFTAYHLAKHSKSVLLLEQFFLPHSRGSSHGQSRIIRKAYPEDFYTMM 67 Query: 280 VRLAHRLWHDAERDAGYTVLTPTPHLDLGPRDGP 381 ++ ++ W ER+AG + T L LG ++ P Sbjct: 68 MKECYQTWAQLEREAGTQLHRQTELLLLGTKENP 101
>MSOX_BACSN (P23342) Monomeric sarcosine oxidase (EC 1.5.3.1) (MSOX)| Length = 387 Score = 46.6 bits (109), Expect = 3e-05 Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 1/99 (1%) Frame = +1 Query: 100 FDVIVVXXXXXXXXXXXXXXXXXXXVLLLERFDLLHQRGSSHGESXXXXXXXXXXXXXXM 279 FDVIVV LL++ FD H GS HG++ Sbjct: 5 FDVIVVGAGSMGMAAGYYLAKQGVKTLLVDSFDPPHTNGSHHGDTRIIRHAYGEGREYVP 64 Query: 280 VRL-AHRLWHDAERDAGYTVLTPTPHLDLGPRDGPAFVA 393 L A LW++ E++ + + T T L GP+ G AFV+ Sbjct: 65 FALRAQELWYELEKETHHKIFTQTGVLVYGPKGGSAFVS 103
>MSOX_BACB0 (P40859) Monomeric sarcosine oxidase (EC 1.5.3.1) (MSOX)| Length = 390 Score = 44.7 bits (104), Expect = 1e-04 Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 1/99 (1%) Frame = +1 Query: 100 FDVIVVXXXXXXXXXXXXXXXXXXXVLLLERFDLLHQRGSSHGESXXXXXXXXXXXXXXM 279 FDVIVV LL++ FD H GS HG++ Sbjct: 5 FDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYVP 64 Query: 280 VRL-AHRLWHDAERDAGYTVLTPTPHLDLGPRDGPAFVA 393 + L + LW++ E++ + + T T L GP+ AFVA Sbjct: 65 LALRSQELWYELEKETHHKIFTKTGVLVFGPKGESAFVA 103
>SOX_HUMAN (Q9P0Z9) Peroxisomal sarcosine oxidase (EC 1.5.3.1) (PSO)| (L-pipecolate oxidase) (EC 1.5.3.7) (L-pipecolic acid oxidase) Length = 390 Score = 43.9 bits (102), Expect = 2e-04 Identities = 28/102 (27%), Positives = 41/102 (40%) Frame = +1 Query: 100 FDVIVVXXXXXXXXXXXXXXXXXXXVLLLERFDLLHQRGSSHGESXXXXXXXXXXXXXXM 279 +D IV+ +LLLE+F L H RGSSHG+S M Sbjct: 8 WDAIVIGAGIQGCFTAYHLAKHRKRILLLEQFFLPHSRGSSHGQSRIIRKAYLEDFYTRM 67 Query: 280 VRLAHRLWHDAERDAGYTVLTPTPHLDLGPRDGPAFVAAIAN 405 + +++W E +AG + T L LG ++ AN Sbjct: 68 MHECYQIWAQLEHEAGTQLHRQTGLLLLGMKENQELKTIQAN 109
>SOX_RABIT (P79371) Peroxisomal sarcosine oxidase (EC 1.5.3.1) (PSO)| (L-pipecolate oxidase) (EC 1.5.3.7) (L-pipecolic acid oxidase) Length = 390 Score = 43.1 bits (100), Expect = 3e-04 Identities = 25/77 (32%), Positives = 36/77 (46%) Frame = +1 Query: 175 VLLLERFDLLHQRGSSHGESXXXXXXXXXXXXXXMVRLAHRLWHDAERDAGYTVLTPTPH 354 +LLLE+F L H RGSSHG+S M+ +++W E +AG + T Sbjct: 33 ILLLEQFFLPHSRGSSHGQSRIIRKAYLEDFYTRMMHECYQIWAQLEHEAGTQLHRQTGL 92 Query: 355 LDLGPRDGPAFVAAIAN 405 L LG ++ AN Sbjct: 93 LLLGMKENQELKTIQAN 109
>MSOX_ARTST (P40873) Monomeric sarcosine oxidase (EC 1.5.3.1) (MSOX)| Length = 388 Score = 40.4 bits (93), Expect = 0.002 Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 1/102 (0%) Frame = +1 Query: 91 ERSFDVIVVXXXXXXXXXXXXXXXXXXXVLLLERFDLLHQRGSSHGESXXXXXXXXXXXX 270 ++ +DVIVV LL++ F H GS HG++ Sbjct: 3 KKDYDVIVVGAGSMGMAAGYYLSKQGVKTLLVDSFHPPHTNGSHHGDTRIIRHAYGEGRE 62 Query: 271 XXMVRL-AHRLWHDAERDAGYTVLTPTPHLDLGPRDGPAFVA 393 L A LW++ E++ + + T T L GP+ FVA Sbjct: 63 YVPFALRAQELWYELEKETHHKIFTKTGVLVFGPKGEAPFVA 104
>MSOX_STRSB (P40854) Monomeric sarcosine oxidase (EC 1.5.3.1) (MSOX)| Length = 388 Score = 40.0 bits (92), Expect = 0.003 Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 1/111 (0%) Frame = +1 Query: 97 SFDVIVVXXXXXXXXXXXXXXXXXXXVLLLERFDLLHQRGSSHGESXXXXXXXXXXXXXX 276 ++DVIV+ VL LE+F +H RGSSHG S Sbjct: 3 TYDVIVIGLGGMGSAAAHHLSARGARVLGLEKFGPVHNRGSSHGGSRITRQSYFEDPAYV 62 Query: 277 MVRL-AHRLWHDAERDAGYTVLTPTPHLDLGPRDGPAFVAAIANGGASELA 426 + L A+ L+ + ER G V T + GP D ++ + +LA Sbjct: 63 PLLLRAYELYEELERATGRNVATLCGGVMAGPPDSRTVSGSLRSATEWDLA 113
>MSOX_STRAW (Q827H4) Monomeric sarcosine oxidase (EC 1.5.3.1) (MSOX)| Length = 384 Score = 37.0 bits (84), Expect = 0.024 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 1/94 (1%) Frame = +1 Query: 97 SFDVIVVXXXXXXXXXXXXXXXXXXXVLLLERFDLLHQRGSSHGESXXXXXXXXXXXXXX 276 ++DVIV+ VL LE+F +H RGSSHG S Sbjct: 4 TYDVIVIGLGGMGSAAAHHLSARGARVLGLEKFGPVHNRGSSHGGSRITRQSYFEDPAYV 63 Query: 277 MVRL-AHRLWHDAERDAGYTVLTPTPHLDLGPRD 375 + L ++ L+ + ER G V T + + +G D Sbjct: 64 PLLLRSYELYEEVERSTGREVATLSGGVMVGRPD 97
>SOX_CAEEL (Q18006) Putative sarcosine oxidase (EC 1.5.3.1)| Length = 384 Score = 34.3 bits (77), Expect = 0.16 Identities = 22/76 (28%), Positives = 31/76 (40%) Frame = +1 Query: 100 FDVIVVXXXXXXXXXXXXXXXXXXXVLLLERFDLLHQRGSSHGESXXXXXXXXXXXXXXM 279 +DV+VV LLLE+F+L H+ GSSHG+S + Sbjct: 5 YDVVVVGAGIFGSCTAYNCQKIGLKTLLLEQFELGHKNGSSHGKSRITRYAHTEVEYVDL 64 Query: 280 VRLAHRLWHDAERDAG 327 V A+ + ER G Sbjct: 65 VGDAYNQIFELERIRG 80
>PPIB_NEUCR (Q7S7Z6) Peptidyl-prolyl cis-trans isomerase B precursor (EC| 5.2.1.8) (PPIase B) (Rotamase B) Length = 207 Score = 30.4 bits (67), Expect = 2.3 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = +1 Query: 325 GYTVLTPTPHLDLGPRDGPAFVAAIANGGASELAPAG 435 GY V+ + GPRD PA IA G E+ P G Sbjct: 166 GYDVVEKIENTKTGPRDAPAEPIKIAKSGELEVPPEG 202
>MTOX_ECO57 (P58523) N-methyl-L-tryptophan oxidase (EC 1.5.3.-) (MTOX)| Length = 372 Score = 30.0 bits (66), Expect = 2.9 Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 2/104 (1%) Frame = +1 Query: 100 FDVIVVXXXXXXXXXXXXXXXXXXXVLLLERFDLLHQRGSSHGESXXXXXXXXXXXXXX- 276 +D+I++ VL+ + HQ GS HG++ Sbjct: 3 YDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEGEKYVP 62 Query: 277 MVRLAHRLWHDAER-DAGYTVLTPTPHLDLGPRDGPAFVAAIAN 405 +V A LW D R + + + ++LGP D AF+A +A+ Sbjct: 63 LVLRAQTLWDDLSRHNEDDPIFVRSGVINLGPADS-AFLANVAH 105
>MTOX_SALTY (P58525) N-methyl-L-tryptophan oxidase (EC 1.5.3.-) (MTOX)| Length = 372 Score = 29.3 bits (64), Expect = 5.0 Identities = 22/102 (21%), Positives = 39/102 (38%), Gaps = 1/102 (0%) Frame = +1 Query: 100 FDVIVVXXXXXXXXXXXXXXXXXXXVLLLERFDLLHQRGSSHGESXXXXXXXXXXXXXX- 276 +D+I++ VL+ + HQ+GS HG++ Sbjct: 3 YDLIIIGSGSVGAAAGYYATRAGLKVLMTDAHMPPHQQGSHHGDTRLIRHAYGEGEKYVP 62 Query: 277 MVRLAHRLWHDAERDAGYTVLTPTPHLDLGPRDGPAFVAAIA 402 +V A LW + + + ++LGP D AF+A +A Sbjct: 63 LVLRAQTLWDELSTHNEEPIFVRSGVVNLGPADS-AFLANVA 103
>MTOX_SHIFL (Q83RT9) N-methyl-L-tryptophan oxidase (EC 1.5.3.-) (MTOX)| Length = 372 Score = 28.5 bits (62), Expect = 8.6 Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 2/104 (1%) Frame = +1 Query: 100 FDVIVVXXXXXXXXXXXXXXXXXXXVLLLERFDLLHQRGSSHGESXXXXXXXXXXXXXX- 276 +D+I++ VL+ + HQ GS HG++ Sbjct: 3 YDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEGEKYVP 62 Query: 277 MVRLAHRLWHDAER-DAGYTVLTPTPHLDLGPRDGPAFVAAIAN 405 +V A LW + R + + + ++LGP D AF+A +A+ Sbjct: 63 LVLRAQTLWDELSRHNEDDPIFVRSGVINLGPADS-AFLANVAH 105
>MTOX_ECOL6 (Q8FIR3) N-methyl-L-tryptophan oxidase (EC 1.5.3.-) (MTOX)| Length = 372 Score = 28.5 bits (62), Expect = 8.6 Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 2/104 (1%) Frame = +1 Query: 100 FDVIVVXXXXXXXXXXXXXXXXXXXVLLLERFDLLHQRGSSHGESXXXXXXXXXXXXXX- 276 +D+I++ VL+ + HQ GS HG++ Sbjct: 3 YDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHHGDTRLIRHAYGEGEKYVP 62 Query: 277 MVRLAHRLWHDAER-DAGYTVLTPTPHLDLGPRDGPAFVAAIAN 405 +V A LW + R + + + ++LGP D AF+A +A+ Sbjct: 63 LVLRAQMLWDELSRHNEDDPIFVRSGVINLGPADS-AFLANVAH 105
>THIED_COREF (Q8FTH8) Multifunctional protein thiED [Includes:| Thiamine-phosphate pyrophosphorylase (EC 2.5.1.3) (TMP pyrophosphorylase) (TMP-PPase) (Thiamine-phosphate synthase); Phosphomethylpyrimidine kinase (EC 2.7.4.7) (HMP-phosphate kinase) (HMP-P k Length = 739 Score = 28.5 bits (62), Expect = 8.6 Identities = 14/39 (35%), Positives = 17/39 (43%) Frame = +1 Query: 340 TPTPHLDLGPRDGPAFVAAIANGGASELAPAGDASRPAW 456 TP PHL +G + A LAPAG +R W Sbjct: 494 TPWPHLRMGAPSDGIITPSDTQSPAPALAPAGPYTRALW 532 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,914,960 Number of Sequences: 219361 Number of extensions: 544437 Number of successful extensions: 1955 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 1893 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1951 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
