ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart61c07 |
|---|---|
| Clone Library Name | barley_pub |
>PROP_MOUSE (P11680) Properdin precursor (Factor P)| Length = 464 Score = 32.7 bits (73), Expect = 0.36 Identities = 26/92 (28%), Positives = 33/92 (35%), Gaps = 10/92 (10%) Frame = +1 Query: 130 SHQRPSPRPCLHFAMANSLLDSPPQLPAAGAWDPLFAVQEPAKPRLVSVAL--------- 282 SHQ P +PC A + P P AG W P P P V+ L Sbjct: 226 SHQPPG-KPCSGPAYEHKACSGLPPCPVAGGWGP----WSPLSPCSVTCGLGQTLEQRTC 280 Query: 283 -PVAPRKNPAYRYGMKRNLEMCTEALGCETGG 375 APR + G +MC +A+ C G Sbjct: 281 DHPAPRHGGPFCAGDATRNQMCNKAVPCPVNG 312
>SYN3_MOUSE (Q8JZP2) Synapsin-3 (Synapsin III)| Length = 579 Score = 32.3 bits (72), Expect = 0.47 Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Frame = +3 Query: 30 SQHLRPIANPSTPLRPWGVSLRPA-SPSPAYLAPI 131 SQ L P A +PLRPWG +PA SP L P+ Sbjct: 393 SQLLVPGATVPSPLRPWGPQTKPAKSPGQGQLGPL 427
>ZIPA_ECOL6 (Q8FFC0) Cell division protein zipA homolog| Length = 332 Score = 31.6 bits (70), Expect = 0.80 Identities = 23/76 (30%), Positives = 31/76 (40%) Frame = +1 Query: 82 ASLSGRHPLAQPTSLQSHQRPSPRPCLHFAMANSLLDSPPQLPAAGAWDPLFAVQEPAKP 261 AS R P+ QP Q + +PRP + P Q PA P +Q+P P Sbjct: 97 ASAQPRQPVQQPPEAQVPPQHAPRP-------TQPVQQPVQQPAYQP-QPEQPLQQPVSP 148 Query: 262 RLVSVALPVAPRKNPA 309 ++ S PV PA Sbjct: 149 QVASAPQPVHSAPQPA 164
>SMRC1_MOUSE (P97496) SWI/SNF-related matrix-associated actin-dependent regulator| of chromatin subfamily C member 1 (SWI/SNF complex 155 kDa subunit) (BRG1-associated factor 155) (SWI3-related protein) Length = 1104 Score = 31.6 bits (70), Expect = 0.80 Identities = 22/77 (28%), Positives = 29/77 (37%) Frame = +1 Query: 1 KTPQQHRTHTASTCVLLQILQLHFGLGASLSGRHPLAQPTSLQSHQRPSPRPCLHFAMAN 180 +TPQQ HT G+ + HP P HQ+P P P +H M Sbjct: 965 QTPQQAHQHTGGP-----------GMAPLGATGHPGMMP-----HQQPPPYPLMHHQMPP 1008 Query: 181 SLLDSPPQLPAAGAWDP 231 P Q+P G+ P Sbjct: 1009 PHPPQPGQIPGPGSMMP 1025
>CS016_HUMAN (Q8ND99) Protein C19orf16| Length = 567 Score = 31.2 bits (69), Expect = 1.0 Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 9/69 (13%) Frame = +1 Query: 130 SHQRPSPRPC-------LHFAMANSLLDSPPQLPA--AGAWDPLFAVQEPAKPRLVSVAL 282 SHQ P P PC + A L+D +LPA A +W P + P K + A Sbjct: 43 SHQGPGPPPCQKAPSGPVTSCKAPFLVDQSQKLPAVPASSWKPPPGLAPPQK----APAA 98 Query: 283 PVAPRKNPA 309 PRK PA Sbjct: 99 SAPPRKAPA 107
>PGBM_HUMAN (P98160) Basement membrane-specific heparan sulfate proteoglycan core| protein precursor (HSPG) (Perlecan) (PLC) Length = 4391 Score = 31.2 bits (69), Expect = 1.0 Identities = 19/52 (36%), Positives = 23/52 (44%) Frame = -3 Query: 368 VSHPSASVHISRFRFMP*RYAGFFLGATGSATDTSLGLAGSWTANRGSQAPA 213 +S P S+H + P + A F ATGS T T WT G Q PA Sbjct: 1863 LSAPVVSIHPPQLTVQPGQLAEFRCSATGSPTPTL-----EWTGGPGGQLPA 1909
>SLOU_DROME (P22807) Homeobox protein slou (S59/2) (Protein slouch) (Homeobox| protein NK-1) Length = 659 Score = 30.8 bits (68), Expect = 1.4 Identities = 21/74 (28%), Positives = 30/74 (40%) Frame = +1 Query: 91 SGRHPLAQPTSLQSHQRPSPRPCLHFAMANSLLDSPPQLPAAGAWDPLFAVQEPAKPRLV 270 S +HP P H P P H +S +PP + A PL PA Sbjct: 218 SHQHPHPHP---HPHPHPHPSAVFHLRAPSSSSTAPP----SPATSPLSPPTSPAMHSDQ 270 Query: 271 SVALPVAPRKNPAY 312 ++ P+AP +NP + Sbjct: 271 QMSPPIAPPQNPPH 284
>T22D2_HUMAN (O75157) TSC22 domain family protein 2 (TSC22-related-inducible| leucine zipper protein 4) Length = 780 Score = 30.4 bits (67), Expect = 1.8 Identities = 18/52 (34%), Positives = 25/52 (48%) Frame = +1 Query: 109 AQPTSLQSHQRPSPRPCLHFAMANSLLDSPPQLPAAGAWDPLFAVQEPAKPR 264 AQP S Q P P + A+A S PP AA P+ A +P++P+ Sbjct: 264 AQPQSFSVGQPQPPPPPVGGAVAQSSAPLPPFPGAATGPQPMMAAAQPSQPQ 315
>HDAC7_MOUSE (Q8C2B3) Histone deacetylase 7a (HD7a)| Length = 938 Score = 30.4 bits (67), Expect = 1.8 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 2/75 (2%) Frame = +1 Query: 196 PPQLPAAGAWDPLFAVQEPAKPRLVSVALPVAPRKNPAYRYGMKRNLEMCTEALGCET-- 369 PP A+ PL Q+ KP + + ++P + PA + K L A ET Sbjct: 348 PPSATASPLLAPLQPRQDRLKPHVQLIKPAISPPQRPA-KPSEKPRLRQIPSAEDLETDG 406 Query: 370 GGVDPAADDADERIE 414 GGV P A+D E E Sbjct: 407 GGVGPMANDGLEHRE 421
>GIT2_MOUSE (Q9JLQ2) ARF GTPase-activating protein GIT2 (G protein-coupled| receptor kinase-interactor 2) (Cool-interacting tyrosine-phosphorylated protein 2) (CAT2) (CAT-2) Length = 708 Score = 30.0 bits (66), Expect = 2.3 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Frame = +1 Query: 13 QHRTHTASTCVLLQILQLHFGLGASLSGRHPLAQPTSLQSHQR-PSPRPCLH 165 +H HTA LLQ+++ + GA+ H L P S+ S +R +P+ +H Sbjct: 49 RHLKHTAWPPTLLQMVETLYNNGANSIWEHSLLDPASIMSGRRKANPQDKVH 100
>ARI1A_HUMAN (O14497) AT-rich interactive domain-containing protein 1A (ARID| domain-containing protein 1A) (SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin subfamily F member 1) (SWI-SNF complex protein p270) (B120) (SWI-like pr Length = 2285 Score = 30.0 bits (66), Expect = 2.3 Identities = 27/83 (32%), Positives = 35/83 (42%) Frame = +1 Query: 73 GLGASLSGRHPLAQPTSLQSHQRPSPRPCLHFAMANSLLDSPPQLPAAGAWDPLFAVQEP 252 G G + SG P A+P S+ PRP L N+ L PP G+ D + Sbjct: 84 GGGGAGSGGGPGAEPDLKNSNGNAGPRPAL-----NNNLTEPPGGGGGGSSDGV-----G 133 Query: 253 AKPRLVSVALPVAPRKNPAYRYG 321 A P + ALP PAY +G Sbjct: 134 APPHSAAAALP-----PPAYGFG 151
>AB1IP_XENLA (Q6DCV1) Amyloid beta A4 precursor protein-binding family B member| 1-interacting protein (APBB1-interacting protein 1) Length = 653 Score = 30.0 bits (66), Expect = 2.3 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Frame = +1 Query: 103 PLAQPTSLQSHQRPSPRPCLHFAMANSLLDSPPQLPAAGAWD--PLFAVQEPAKP 261 P + P+ + + + P P P M+N+ PP P A A + PL + P KP Sbjct: 558 PPSPPSFMSNAENPPPPPVTQLQMSNAPAPPPPPPPPAPAANVPPLPVKKHPPKP 612
>RP54_SALTY (P26979) RNA polymerase sigma-54 factor| Length = 477 Score = 30.0 bits (66), Expect = 2.3 Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 3/89 (3%) Frame = +1 Query: 4 TPQQHRTHTASTCVLLQILQLHFGLGASLSGRHPLAQPTSLQSH---QRPSPRPCLHFAM 174 TPQ + A + L L+L L +L +PL + T L Q+P L A Sbjct: 16 TPQLQQ---AIRLLQLSTLELQQELQQALEN-NPLLEQTDLHDEIDTQQPQDNDPLDTAD 71 Query: 175 ANSLLDSPPQLPAAGAWDPLFAVQEPAKP 261 A + P +LP +WD ++ P+ P Sbjct: 72 ALEQKEMPEELPLDASWDEIYTAGTPSGP 100
>ENH2_HUMAN (Q9N2J9) HERV-H_3q26 provirus ancestral Env polyprotein precursor| (Envelope polyprotein) (Env protein HERV-H/p60) (HERV-H/env60) [Contains: Surface protein (SU); Transmembrane protein (TM)] Length = 563 Score = 30.0 bits (66), Expect = 2.3 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 4/50 (8%) Frame = +2 Query: 125 SNHTNDRHLDRVSISPWLIR-CSTRRRSSLPPGPG---ILCSPSRNLPSL 262 SN+ RHL +S+ PWL CS S PP P ++ SP N SL Sbjct: 225 SNYCLGRHLSCISLHPWLFSPCS----SDSPPRPSSCLLIPSPKNNSESL 270
>URE1_STAAW (P67405) Urease alpha subunit (EC 3.5.1.5) (Urea amidohydrolase| alpha subunit) Length = 571 Score = 29.6 bits (65), Expect = 3.0 Identities = 15/49 (30%), Positives = 26/49 (53%) Frame = +2 Query: 23 HTQPAPASYCKSFNSTSALGRLSPAGIP*PSLPRSNHTNDRHLDRVSIS 169 HT+ A + ++A + P+ P+LP +++T D HLD V I+ Sbjct: 276 HTEGAGGGHAPDLIKSAAFSNILPSSTN-PTLPYTHNTVDEHLDMVMIT 323
>URE1_STAAS (Q6G732) Urease alpha subunit (EC 3.5.1.5) (Urea amidohydrolase| alpha subunit) Length = 571 Score = 29.6 bits (65), Expect = 3.0 Identities = 15/49 (30%), Positives = 26/49 (53%) Frame = +2 Query: 23 HTQPAPASYCKSFNSTSALGRLSPAGIP*PSLPRSNHTNDRHLDRVSIS 169 HT+ A + ++A + P+ P+LP +++T D HLD V I+ Sbjct: 276 HTEGAGGGHAPDLIKSAAFSNILPSSTN-PTLPYTHNTVDEHLDMVMIT 323
>URE1_STAAN (P67404) Urease alpha subunit (EC 3.5.1.5) (Urea amidohydrolase| alpha subunit) Length = 571 Score = 29.6 bits (65), Expect = 3.0 Identities = 15/49 (30%), Positives = 26/49 (53%) Frame = +2 Query: 23 HTQPAPASYCKSFNSTSALGRLSPAGIP*PSLPRSNHTNDRHLDRVSIS 169 HT+ A + ++A + P+ P+LP +++T D HLD V I+ Sbjct: 276 HTEGAGGGHAPDLIKSAAFSNILPSSTN-PTLPYTHNTVDEHLDMVMIT 323
>URE1_STAAM (P67403) Urease alpha subunit (EC 3.5.1.5) (Urea amidohydrolase| alpha subunit) Length = 571 Score = 29.6 bits (65), Expect = 3.0 Identities = 15/49 (30%), Positives = 26/49 (53%) Frame = +2 Query: 23 HTQPAPASYCKSFNSTSALGRLSPAGIP*PSLPRSNHTNDRHLDRVSIS 169 HT+ A + ++A + P+ P+LP +++T D HLD V I+ Sbjct: 276 HTEGAGGGHAPDLIKSAAFSNILPSSTN-PTLPYTHNTVDEHLDMVMIT 323
>URE1_STAAC (Q5HDR8) Urease alpha subunit (EC 3.5.1.5) (Urea amidohydrolase| alpha subunit) Length = 571 Score = 29.6 bits (65), Expect = 3.0 Identities = 15/49 (30%), Positives = 26/49 (53%) Frame = +2 Query: 23 HTQPAPASYCKSFNSTSALGRLSPAGIP*PSLPRSNHTNDRHLDRVSIS 169 HT+ A + ++A + P+ P+LP +++T D HLD V I+ Sbjct: 276 HTEGAGGGHAPDLIKSAAFSNILPSSTN-PTLPYTHNTVDEHLDMVMIT 323
>SMRC1_HUMAN (Q92922) SWI/SNF-related matrix-associated actin-dependent regulator| of chromatin subfamily C member 1 (SWI/SNF complex 155 kDa subunit) (BRG1-associated factor 155) Length = 1105 Score = 29.6 bits (65), Expect = 3.0 Identities = 21/77 (27%), Positives = 28/77 (36%) Frame = +1 Query: 1 KTPQQHRTHTASTCVLLQILQLHFGLGASLSGRHPLAQPTSLQSHQRPSPRPCLHFAMAN 180 + PQQ H+ GL + HP P HQ+P P P +H M Sbjct: 965 QNPQQAHQHSGGP-----------GLAPLGAAGHPGMMP-----HQQPPPYPLMHHQMPP 1008 Query: 181 SLLDSPPQLPAAGAWDP 231 P Q+P G+ P Sbjct: 1009 PHPPQPGQIPGPGSMMP 1025
>SYN3_RAT (O70441) Synapsin-3 (Synapsin III)| Length = 579 Score = 29.6 bits (65), Expect = 3.0 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%) Frame = +3 Query: 30 SQHLRPIANPSTPLRPWGVSLRPA-SPSPAYLAPI 131 SQ L P A+ +PLRPWG + A SP L P+ Sbjct: 393 SQLLVPGASVPSPLRPWGPQTKSAKSPGQGQLGPL 427
>MYO15_HUMAN (Q9UKN7) Myosin-15 (Myosin XV) (Unconventional myosin-15)| Length = 3530 Score = 29.6 bits (65), Expect = 3.0 Identities = 44/137 (32%), Positives = 48/137 (35%), Gaps = 11/137 (8%) Frame = +2 Query: 38 PASYCKSFNSTSALGRLSPAGIP*PSLPRSNHTNDRHLDRVSISPWLIRCSTRRRSSLPP 217 P S +S A GRL P G P P PR SP L C + RRSSL Sbjct: 817 PRSLQESPAPRRAAGRLGPPGSPLPGSPRPP------------SPPLGLCHSPRRSSL-- 862 Query: 218 GPGILCSPSRNLPSLGLCRWRYRSLPG--------RIQRTVTA*SGTWRCAP---RRSGA 364 NLPS WR S P R+ +G WR AP R S Sbjct: 863 ----------NLPSRLPHTWRRLSEPPTRAVKPQVRLPFHRPPRAGAWR-APLEHRESPR 911 Query: 365 RPVASTQRLTTPTSASS 415 P S T P A S Sbjct: 912 EPEDSETPWTVPPLAPS 928
>KINB1_ARATH (Q84VQ1) SNF1-related protein kinase regulatory subunit beta-1| (AKIN beta1) (AKINB1) Length = 283 Score = 29.3 bits (64), Expect = 3.9 Identities = 20/59 (33%), Positives = 26/59 (44%) Frame = +1 Query: 85 SLSGRHPLAQPTSLQSHQRPSPRPCLHFAMANSLLDSPPQLPAAGAWDPLFAVQEPAKP 261 S S R P++ H+RPS ++S+ SPP PA LFA Q P P Sbjct: 22 SSSARSNGGDPSARSRHRRPS---------SDSMSSSPPGSPARSPSPFLFAPQVPVAP 71
>URE1_STAES (Q8CNC9) Urease alpha subunit (EC 3.5.1.5) (Urea amidohydrolase| alpha subunit) Length = 571 Score = 29.3 bits (64), Expect = 3.9 Identities = 15/49 (30%), Positives = 26/49 (53%) Frame = +2 Query: 23 HTQPAPASYCKSFNSTSALGRLSPAGIP*PSLPRSNHTNDRHLDRVSIS 169 HT+ A + ++A + P+ P+LP +++T D HLD V I+ Sbjct: 276 HTEGAGGGHAPDLIKSAAYSNILPSSTN-PTLPYTHNTVDEHLDMVMIT 323
>URE1_STAEQ (Q5HLW1) Urease alpha subunit (EC 3.5.1.5) (Urea amidohydrolase| alpha subunit) Length = 571 Score = 29.3 bits (64), Expect = 3.9 Identities = 15/49 (30%), Positives = 26/49 (53%) Frame = +2 Query: 23 HTQPAPASYCKSFNSTSALGRLSPAGIP*PSLPRSNHTNDRHLDRVSIS 169 HT+ A + ++A + P+ P+LP +++T D HLD V I+ Sbjct: 276 HTEGAGGGHAPDLIKSAAYSNILPSSTN-PTLPYTHNTVDEHLDMVMIT 323
>URE1_STAAB (Q2YYQ6) Urease alpha subunit (EC 3.5.1.5) (Urea amidohydrolase| alpha subunit) Length = 571 Score = 29.3 bits (64), Expect = 3.9 Identities = 15/49 (30%), Positives = 26/49 (53%) Frame = +2 Query: 23 HTQPAPASYCKSFNSTSALGRLSPAGIP*PSLPRSNHTNDRHLDRVSIS 169 HT+ A + ++A + P+ P+LP +++T D HLD V I+ Sbjct: 276 HTEGAGGGHTPDLIKSAAFSNILPSSTN-PTLPYTHNTVDEHLDMVMIT 323
>MAP4_HUMAN (P27816) Microtubule-associated protein 4 (MAP 4)| Length = 1152 Score = 29.3 bits (64), Expect = 3.9 Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 11/114 (9%) Frame = +1 Query: 112 QPTSLQSHQRPSPRPCLH---FAMANSLLDS-PPQLPAAGAWDPLFAVQEPAKPRLVS-- 273 QPTSL P+ L+ ++A+ L+ + PP+ PA + P + KP+ ++ Sbjct: 720 QPTSLPKQPAPTTIGGLNKKPMSLASGLVPAAPPKRPAVASARPSILPSKDVKPKPIADA 779 Query: 274 -----VALPVAPRKNPAYRYGMKRNLEMCTEALGCETGGVDPAADDADERIERK 420 A P P PA R G K + P++ + +K Sbjct: 780 KAPEKRASPSKPASAPASRSGSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKK 833
>ACEA_CUCSA (P49296) Isocitrate lyase (EC 4.1.3.1) (Isocitrase) (Isocitratase)| (ICL) Length = 576 Score = 29.3 bits (64), Expect = 3.9 Identities = 13/39 (33%), Positives = 22/39 (56%) Frame = +2 Query: 143 RHLDRVSISPWLIRCSTRRRSSLPPGPGILCSPSRNLPS 259 +HLD + +S W +CS+ S+ PGP + P +P+ Sbjct: 96 KHLDTIYVSGW--QCSSTHTSTNEPGPDLADYPYDTVPN 132
>ACEA_CUCMA (P93110) Isocitrate lyase (EC 4.1.3.1) (Isocitrase) (Isocitratase)| (ICL) Length = 576 Score = 29.3 bits (64), Expect = 3.9 Identities = 13/39 (33%), Positives = 22/39 (56%) Frame = +2 Query: 143 RHLDRVSISPWLIRCSTRRRSSLPPGPGILCSPSRNLPS 259 +HLD + +S W +CS+ S+ PGP + P +P+ Sbjct: 96 KHLDSIYVSGW--QCSSTHTSTNEPGPDLADYPYDTVPN 132
>ACEA_BRANA (P25248) Isocitrate lyase (EC 4.1.3.1) (Isocitrase) (Isocitratase)| (ICL) Length = 576 Score = 29.3 bits (64), Expect = 3.9 Identities = 13/39 (33%), Positives = 22/39 (56%) Frame = +2 Query: 143 RHLDRVSISPWLIRCSTRRRSSLPPGPGILCSPSRNLPS 259 +HLD + +S W +CS+ S+ PGP + P +P+ Sbjct: 96 KHLDTIYVSGW--QCSSTHTSTNEPGPDLADYPYDTVPN 132
>ACEA_ARATH (P28297) Isocitrate lyase (EC 4.1.3.1) (Isocitrase) (Isocitratase)| (ICL) Length = 576 Score = 29.3 bits (64), Expect = 3.9 Identities = 13/39 (33%), Positives = 22/39 (56%) Frame = +2 Query: 143 RHLDRVSISPWLIRCSTRRRSSLPPGPGILCSPSRNLPS 259 +HLD + +S W +CS+ S+ PGP + P +P+ Sbjct: 96 KHLDTIYVSGW--QCSSTHTSTNEPGPDLADYPYDTVPN 132
>PCNT_HUMAN (O95613) Pericentrin (Pericentrin B) (Kendrin)| Length = 3336 Score = 29.3 bits (64), Expect = 3.9 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 2/57 (3%) Frame = +2 Query: 104 P*PSLPRSNHTNDRHLDRVSISPWLIRCSTRRRSSLPP--GPGILCSPSRNLPSLGL 268 P PSLP + H+ L S R +SLP GPG+LCSP + +L L Sbjct: 2238 PWPSLPVTPHSGALSLCSADTS-----LGDRADTSLPQTQGPGLLCSPGVSAAALAL 2289
>URE1_CORGL (Q79VJ3) Urease alpha subunit (EC 3.5.1.5) (Urea amidohydrolase| alpha subunit) Length = 570 Score = 29.3 bits (64), Expect = 3.9 Identities = 16/52 (30%), Positives = 27/52 (51%) Frame = +2 Query: 14 NTEHTQPAPASYCKSFNSTSALGRLSPAGIP*PSLPRSNHTNDRHLDRVSIS 169 +T HT+ A + +AL + PA P+LP + +T + HLD V ++ Sbjct: 272 HTFHTEGAGGGHAPDLIRVAALPNVLPASTN-PTLPYTRNTVEEHLDMVMVA 322
>ACEA_LYCES (P49297) Isocitrate lyase (EC 4.1.3.1) (Isocitrase) (Isocitratase)| (ICL) Length = 575 Score = 29.3 bits (64), Expect = 3.9 Identities = 13/39 (33%), Positives = 22/39 (56%) Frame = +2 Query: 143 RHLDRVSISPWLIRCSTRRRSSLPPGPGILCSPSRNLPS 259 +HLD + +S W +CS+ S+ PGP + P +P+ Sbjct: 96 KHLDTIYVSGW--QCSSTHTSTNEPGPDLADYPYDTVPN 132
>URE1_STAAR (Q6GEE4) Urease alpha subunit (EC 3.5.1.5) (Urea amidohydrolase| alpha subunit) Length = 571 Score = 28.9 bits (63), Expect = 5.2 Identities = 15/49 (30%), Positives = 26/49 (53%) Frame = +2 Query: 23 HTQPAPASYCKSFNSTSALGRLSPAGIP*PSLPRSNHTNDRHLDRVSIS 169 HT+ A + ++A + P+ P+LP +++T D HLD V I+ Sbjct: 276 HTEGAGGGHAPDLIKSAAFPNILPSSTN-PTLPYTHNTVDEHLDMVMIT 323
>ILV1_MAIZE (Q41768) Acetolactate synthase 1, chloroplast precursor (EC| 2.2.1.6) (Acetohydroxy-acid synthase 1) Length = 638 Score = 28.9 bits (63), Expect = 5.2 Identities = 10/13 (76%), Positives = 12/13 (92%) Frame = +3 Query: 45 PIANPSTPLRPWG 83 P+A P+TPLRPWG Sbjct: 48 PMAPPATPLRPWG 60
>CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)| Length = 2442 Score = 28.9 bits (63), Expect = 5.2 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Frame = +1 Query: 100 HPLAQPT-SLQSHQRPSPRPCLHFAMANSLLDSPPQLPAAGAWDPLFAVQEPAKPRLVSV 276 H LA+ +Q R LH +L + P LPA GA P+ +P +P + Sbjct: 652 HLLAEKIYKIQKELEEKRRSRLH---KQGILGNQPALPAPGAQPPVIPQAQPVRPPNGPL 708 Query: 277 ALPV 288 +LPV Sbjct: 709 SLPV 712
>GIDA_RHOPA (Q6ND15) tRNA uridine 5-carboxymethylaminomethyl modification| enzyme gidA (Glucose-inhibited division protein A) Length = 622 Score = 28.9 bits (63), Expect = 5.2 Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 3/55 (5%) Frame = -3 Query: 248 SWTANRGSQAPAAXXXXXXXXXELAMAKWRHG---RGDGRWCDWSEVGWARGCRP 93 SW A R +APA + + + G R DGR DWS V G P Sbjct: 167 SWPAGRIDEAPAMGLSSSFEALGFKLGRLKTGTPPRLDGRTIDWSAVEMQPGDDP 221
>ZIPA_SHIFL (Q83QN9) Cell division protein zipA homolog| Length = 327 Score = 28.9 bits (63), Expect = 5.2 Identities = 22/76 (28%), Positives = 29/76 (38%) Frame = +1 Query: 82 ASLSGRHPLAQPTSLQSHQRPSPRPCLHFAMANSLLDSPPQLPAAGAWDPLFAVQEPAKP 261 AS R P+ QP Q + +PRP P Q PA P +Q+P P Sbjct: 96 ASAQPRQPVQQPPEAQVPPQHAPRPA-----------QPVQQPAYQP-QPEQPLQQPVSP 143 Query: 262 RLVSVALPVAPRKNPA 309 ++ PV PA Sbjct: 144 QVAPAPQPVHSAPQPA 159
>ENH5_HUMAN (P61549) HERV-H_19p13.11 provirus ancestral Env polyprotein| precursor (Envelope polyprotein) (Env protein RGH1) (Env protein RTLV-H) [Includes: Surface protein (SU)] Length = 369 Score = 28.5 bits (62), Expect = 6.7 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 4/47 (8%) Frame = +2 Query: 122 RSNHTNDRHLDRVSISPWL-IRCSTRRRSSLPPGPG---ILCSPSRN 250 RSN+ RHL +S+ PWL CS S PP P ++ SP N Sbjct: 210 RSNYCLGRHLPCISLHPWLPSPCS----SDSPPRPSSRLLIPSPENN 252
>CR1_HUMAN (P17927) Complement receptor type 1 precursor (C3b/C4b receptor)| (CD35 antigen) Length = 2039 Score = 28.5 bits (62), Expect = 6.7 Identities = 21/49 (42%), Positives = 26/49 (53%) Frame = +2 Query: 128 NHTNDRHLDRVSISPWLIRCSTRRRSSLPPGPGILCSPSRNLPSLGLCR 274 N+T D H DR S LI ST R +S P G G+ SP+ LG C+ Sbjct: 897 NYTCDPHPDR-GTSFDLIGESTIRCTSDPQGNGVWSSPAPRCGILGHCQ 944 Score = 28.5 bits (62), Expect = 6.7 Identities = 21/49 (42%), Positives = 26/49 (53%) Frame = +2 Query: 128 NHTNDRHLDRVSISPWLIRCSTRRRSSLPPGPGILCSPSRNLPSLGLCR 274 N+T D H DR S LI ST R +S P G G+ SP+ LG C+ Sbjct: 447 NYTCDPHPDR-GTSFDLIGESTIRCTSDPQGNGVWSSPAPRCGILGHCQ 494
>URE1_BACC1 (Q733J6) Urease alpha subunit (EC 3.5.1.5) (Urea amidohydrolase| alpha subunit) Length = 570 Score = 28.5 bits (62), Expect = 6.7 Identities = 15/51 (29%), Positives = 26/51 (50%) Frame = +2 Query: 14 NTEHTQPAPASYCKSFNSTSALGRLSPAGIP*PSLPRSNHTNDRHLDRVSI 166 +T HT+ A + +AL + P+ P+LP + +T D HLD + + Sbjct: 272 HTYHTEGAGGGHAPDIIKIAALNNILPSSTN-PTLPYTVNTLDEHLDMLMV 321
>B7_USTMA (P22021) Mating-type locus allele B7 protein| Length = 410 Score = 28.1 bits (61), Expect = 8.8 Identities = 14/46 (30%), Positives = 23/46 (50%) Frame = +1 Query: 103 PLAQPTSLQSHQRPSPRPCLHFAMANSLLDSPPQLPAAGAWDPLFA 240 P A+P S ++ R S P + + +S L+S P+L D F+ Sbjct: 301 PAAKPNSRTANPRASTTPSIDSTLDSSKLESTPELSMCSTADTSFS 346
>CHS3_EXODE (P30602) Chitin synthase 3 (EC 2.4.1.16) (Chitin-UDP| acetyl-glucosaminyl transferase 3) (Class-III chitin synthase 3) Length = 885 Score = 28.1 bits (61), Expect = 8.8 Identities = 16/49 (32%), Positives = 24/49 (48%) Frame = +2 Query: 158 VSISPWLIRCSTRRRSSLPPGPGILCSPSRNLPSLGLCRWRYRSLPGRI 304 V+ + LIR + +SLPP I C +N + RW + + GRI Sbjct: 309 VTANQQLIRPNDNDATSLPPAQMIFCLKQKNRKKINSHRWLFNAF-GRI 356
>ILV2_MAIZE (Q41769) Acetolactate synthase 2, chloroplast precursor (EC| 2.2.1.6) (Acetohydroxy-acid synthase 2) Length = 638 Score = 28.1 bits (61), Expect = 8.8 Identities = 10/13 (76%), Positives = 11/13 (84%) Frame = +3 Query: 45 PIANPSTPLRPWG 83 P A P+TPLRPWG Sbjct: 48 PTAPPATPLRPWG 60
>3BP2_MOUSE (Q06649) SH3 domain-binding protein 2 (3BP-2)| Length = 559 Score = 28.1 bits (61), Expect = 8.8 Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 2/107 (1%) Frame = +1 Query: 103 PLAQPTSLQSHQRPSPRPCLHFAMANSLLDSPP--QLPAAGAWDPLFAVQEPAKPRLVSV 276 P +P L+ + PSPR FA + PP ++P P V+ PR + Sbjct: 352 PANKPKFLKIAEEPSPREAAKFAPVPPVAPRPPVQKMPM-----PEATVRPAVLPRPENT 406 Query: 277 ALPVAPRKNPAYRYGMKRNLEMCTEALGCETGGVDPAADDADERIER 417 LP R P + + E + +TG +D+DE E+ Sbjct: 407 PLPHLQRSPPDGQSFRGFSFEKARQPSQADTG-----EEDSDEDYEK 448
>CAC1H_MOUSE (O88427) Voltage-dependent T-type calcium channel alpha-1H subunit| (Voltage-gated calcium channel alpha subunit Cav3.2) Length = 2365 Score = 28.1 bits (61), Expect = 8.8 Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 2/71 (2%) Frame = +1 Query: 88 LSGRHPLAQP--TSLQSHQRPSPRPCLHFAMANSLLDSPPQLPAAGAWDPLFAVQEPAKP 261 L GR L P T + P+P+ H MA++LLDS + ++G+ DP Q+ Sbjct: 1063 LEGRGSLPPPLITHTAATPMPTPKSSPHLDMAHTLLDS--RRSSSGSVDPQLGDQKSLAS 1120 Query: 262 RLVSVALPVAP 294 S P P Sbjct: 1121 LRSSPCAPWGP 1131
>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2157 Score = 28.1 bits (61), Expect = 8.8 Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 2/44 (4%) Frame = +1 Query: 94 GRHPLAQPTSLQSHQRPSPRPCLHF--AMANSLLDSPPQLPAAG 219 G HP +P Q+ Q PSPRP + NS L S P G Sbjct: 1494 GGHPRHKPGPPQAPQGPSPRPPTRYEPQRVNSGLSSDPHFEEPG 1537
>GIT2_HUMAN (Q14161) ARF GTPase-activating protein GIT2 (G protein-coupled| receptor kinase-interactor 2) (GRK-interacting protein 2) (Cool-interacting tyrosine-phosphorylated protein 2) (CAT2) (CAT-2) Length = 759 Score = 28.1 bits (61), Expect = 8.8 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = +1 Query: 13 QHRTHTASTCVLLQILQLHFGLGASLSGRHPLAQPTSLQSHQR-PSPRPCLH 165 +H HT LLQ+++ + GA+ H L P S+ S +R +P+ +H Sbjct: 49 RHLKHTPWPPTLLQMVETLYNNGANSIWEHSLLDPASIMSGRRKANPQDKVH 100
>BAT2_RAT (Q6MG48) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2161 Score = 28.1 bits (61), Expect = 8.8 Identities = 19/53 (35%), Positives = 25/53 (47%) Frame = +1 Query: 94 GRHPLAQPTSLQSHQRPSPRPCLHFAMANSLLDSPPQLPAAGAWDPLFAVQEP 252 G HP +P Q+ Q SPRP H+ PP+ A + DP F +EP Sbjct: 1494 GGHPRPKPGPPQAPQGSSPRPPTHY--------DPPRASNAISSDPHF--EEP 1536 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,764,095 Number of Sequences: 219361 Number of extensions: 1452902 Number of successful extensions: 4887 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 4617 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4875 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
