ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart60d09 |
|---|---|
| Clone Library Name | barley_pub |
>AKR2_ARATH (Q9SAR5) Ankyrin repeat domain-containing protein 2 (AtAKR2)| Length = 342 Score = 83.2 bits (204), Expect = 2e-16 Identities = 45/84 (53%), Positives = 59/84 (70%), Gaps = 2/84 (2%) Frame = +1 Query: 166 TDESKSKKTEGSSNEGQGVPPAAAAGLS-GPFDFSSMQSLLNDPSIKEMADQIARDPAFN 342 T+E+KS K E +S +A GL+ FDFS+M S+LNDPSI+EMA+QIA+DPAFN Sbjct: 19 TEENKSSKPESASGSSTS---SAMPGLNFNAFDFSNMASILNDPSIREMAEQIAKDPAFN 75 Query: 343 QMAEQLQKGAQGAGEQ-GMPPLDP 411 Q+AEQLQ+ AG++ G P DP Sbjct: 76 QLAEQLQRSIPNAGQEGGFPNFDP 99
>INP4B_MACFA (Q4R4D7) Type II inositol-3,4-bisphosphate 4-phosphatase (EC| 3.1.3.66) (Inositol polyphosphate 4-phosphatase type II) Length = 813 Score = 34.3 bits (77), Expect = 0.12 Identities = 17/39 (43%), Positives = 23/39 (58%) Frame = +1 Query: 187 KTEGSSNEGQGVPPAAAAGLSGPFDFSSMQSLLNDPSIK 303 K EG+S EGQ PAA A G F+S+Q N+P ++ Sbjct: 4 KEEGASEEGQHFLPAAQASDPGDCQFTSIQKTPNEPQLE 42
>INP4B_MOUSE (Q6P1Y8) Type II inositol-3,4-bisphosphate 4-phosphatase (EC| 3.1.3.66) (Inositol polyphosphate 4-phosphatase type II) Length = 924 Score = 33.1 bits (74), Expect = 0.26 Identities = 16/39 (41%), Positives = 23/39 (58%) Frame = +1 Query: 187 KTEGSSNEGQGVPPAAAAGLSGPFDFSSMQSLLNDPSIK 303 K EG+S EGQ PAA A F+S+Q + N+P ++ Sbjct: 4 KEEGTSEEGQHFLPAAQANDPEDIQFTSIQKIPNEPQLE 42
>INP4B_PONPY (Q5RA60) Type II inositol-3,4-bisphosphate 4-phosphatase (EC| 3.1.3.66) (Inositol polyphosphate 4-phosphatase type II) Length = 924 Score = 32.7 bits (73), Expect = 0.34 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = +1 Query: 187 KTEGSSNEGQGVPPAAAAGLSGPFDFSSMQSLLNDPSIK 303 K EG+S EGQ P A A G F+S+Q N+P ++ Sbjct: 4 KEEGASEEGQHFLPTAQASDPGDCQFTSIQKTPNEPQLE 42
>INP4B_HUMAN (O15327) Type II inositol-3,4-bisphosphate 4-phosphatase (EC| 3.1.3.66) (Inositol polyphosphate 4-phosphatase type II) Length = 924 Score = 32.7 bits (73), Expect = 0.34 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = +1 Query: 187 KTEGSSNEGQGVPPAAAAGLSGPFDFSSMQSLLNDPSIK 303 K EG+S EGQ P A A G F+S+Q N+P ++ Sbjct: 4 KEEGASEEGQHFLPTAQANDPGDCQFTSIQKTPNEPQLE 42
>INP4B_RAT (Q9QWG5) Type II inositol-3,4-bisphosphate 4-phosphatase (EC| 3.1.3.66) (Inositol polyphosphate 4-phosphatase type II) Length = 928 Score = 31.6 bits (70), Expect = 0.76 Identities = 16/39 (41%), Positives = 22/39 (56%) Frame = +1 Query: 187 KTEGSSNEGQGVPPAAAAGLSGPFDFSSMQSLLNDPSIK 303 K EG+S EGQ PAA A F+S+Q N+P ++ Sbjct: 4 KEEGTSEEGQHFLPAAQANDPEDIQFTSIQKSPNEPQLE 42
>KCY_MYCGA (Q7NBV1) Cytidylate kinase (EC 2.7.4.14) (CK) (Cytidine| monophosphate kinase) (CMP kinase) Length = 226 Score = 30.8 bits (68), Expect = 1.3 Identities = 14/33 (42%), Positives = 21/33 (63%) Frame = +1 Query: 268 SMQSLLNDPSIKEMADQIARDPAFNQMAEQLQK 366 ++ LLNDP+I + A +IA+DP A LQ+ Sbjct: 83 NISQLLNDPTISKGASEIAQDPKIRAYALSLQQ 115
>CP4A5_RABIT (P14579) Cytochrome P450 4A5 precursor (EC 1.14.15.3) (CYPIVA5)| (Lauric acid omega-hydroxylase) Length = 511 Score = 30.4 bits (67), Expect = 1.7 Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 14/83 (16%) Frame = +2 Query: 203 PTKVKVFLQLPLQACRVLSIFLLCKVCSMIHL*RRWQIRL--QGTLHSIRWLSSYRKVLR 376 PT++ L LQ +L + LL + ++L R+W +R Q WL + + + Sbjct: 8 PTRLPGSLSGLLQVAALLGLLLLLLKAAQLYLRRQWLLRALQQFPCPPFHWLLGHSREFQ 67 Query: 377 VQEN------------RACLHWI 409 + + RAC HWI Sbjct: 68 MNQELQQILKWVEKFPRACPHWI 90
>ANDR_PANTR (O97775) Androgen receptor (Dihydrotestosterone receptor)| Length = 911 Score = 29.6 bits (65), Expect = 2.9 Identities = 18/51 (35%), Positives = 24/51 (47%) Frame = +1 Query: 178 KSKKTEGSSNEGQGVPPAAAAGLSGPFDFSSMQSLLNDPSIKEMADQIARD 330 K T+G E G +AAAG SG + S SL ++ E A +RD Sbjct: 310 KGGYTKGLEGESLGCSGSAAAGSSGTLELPSTLSLYKSGALDEAAAYQSRD 360
>ANDR_HUMAN (P10275) Androgen receptor (Dihydrotestosterone receptor)| Length = 919 Score = 29.6 bits (65), Expect = 2.9 Identities = 18/51 (35%), Positives = 24/51 (47%) Frame = +1 Query: 178 KSKKTEGSSNEGQGVPPAAAAGLSGPFDFSSMQSLLNDPSIKEMADQIARD 330 K T+G E G +AAAG SG + S SL ++ E A +RD Sbjct: 311 KGGYTKGLEGESLGCSGSAAAGSSGTLELPSTLSLYKSGALDEAAAYQSRD 361
>ANDR_PAPHA (O97960) Androgen receptor (Dihydrotestosterone receptor)| Length = 895 Score = 29.6 bits (65), Expect = 2.9 Identities = 18/51 (35%), Positives = 24/51 (47%) Frame = +1 Query: 178 KSKKTEGSSNEGQGVPPAAAAGLSGPFDFSSMQSLLNDPSIKEMADQIARD 330 K T+G E G +AAAG SG + S SL ++ E A +RD Sbjct: 296 KGGYTKGLEGESLGCSGSAAAGSSGTLELPSTLSLYKSGALDEAAAYQSRD 346
>ANDR_MACMU (Q6QT55) Androgen receptor (Dihydrotestosterone receptor)| Length = 895 Score = 29.6 bits (65), Expect = 2.9 Identities = 18/51 (35%), Positives = 24/51 (47%) Frame = +1 Query: 178 KSKKTEGSSNEGQGVPPAAAAGLSGPFDFSSMQSLLNDPSIKEMADQIARD 330 K T+G E G +AAAG SG + S SL ++ E A +RD Sbjct: 296 KGGYTKGLEGESLGCSGSAAAGSSGTLELPSTLSLYKSGALDEAAAYQSRD 346
>ANDR_MACFA (O97952) Androgen receptor (Dihydrotestosterone receptor)| Length = 895 Score = 29.6 bits (65), Expect = 2.9 Identities = 18/51 (35%), Positives = 24/51 (47%) Frame = +1 Query: 178 KSKKTEGSSNEGQGVPPAAAAGLSGPFDFSSMQSLLNDPSIKEMADQIARD 330 K T+G E G +AAAG SG + S SL ++ E A +RD Sbjct: 296 KGGYTKGLEGESLGCSGSAAAGSSGTLELPSTLSLYKSGALDEAAAYQSRD 346
>41_DROME (Q9V8R9) Protein 4.1 homolog (Protein coracle)| Length = 1698 Score = 29.3 bits (64), Expect = 3.7 Identities = 23/91 (25%), Positives = 38/91 (41%) Frame = +1 Query: 139 SGGDLPSGFTDESKSKKTEGSSNEGQGVPPAAAAGLSGPFDFSSMQSLLNDPSIKEMADQ 318 S D+ +G + SKK + G+G P AAAA +G ++ + +K M Sbjct: 729 SKADVAAGLAGAAGSKKPGSPTKTGKGAPGAAAAAAAGAAGAAAAAAKPKKRRVKIMVIT 788 Query: 319 IARDPAFNQMAEQLQKGAQGAGEQGMPPLDP 411 DP+ ++ + G+ E LDP Sbjct: 789 SKFDPSTKRIDAE-----NGSIEHSTGILDP 814
>HAP1_MOUSE (O35668) Huntingtin-associated protein 1 (HAP-1)| Length = 628 Score = 28.1 bits (61), Expect = 8.3 Identities = 19/85 (22%), Positives = 37/85 (43%) Frame = +1 Query: 154 PSGFTDESKSKKTEGSSNEGQGVPPAAAAGLSGPFDFSSMQSLLNDPSIKEMADQIARDP 333 P+ F + + EG E + +PP A L P DF + + L+ + + + + + Sbjct: 444 PAYFMERRDTHCREGRKKEQRAMPPPPAQDLKPPEDFEAPEELVPEEELGAIEEVGTAED 503 Query: 334 AFNQMAEQLQKGAQGAGEQGMPPLD 408 + EQ + + A E+ P +D Sbjct: 504 GQAEENEQASEETE-AWEEVEPEVD 527
>VIT_ONCMY (Q92093) Vitellogenin precursor (VTG) [Contains: Lipovitellin I| (LVI); Phosvitin (PV); Lipovitellin II (LVII)] Length = 1659 Score = 28.1 bits (61), Expect = 8.3 Identities = 14/47 (29%), Positives = 26/47 (55%) Frame = +3 Query: 273 AKFAQ*SIYKGDGRSDCKGPCIQSDG*AATERCSGCRRTGHASIGSS 413 AK + + K ++C+ ++ G A TE+C CR+ G A +G++ Sbjct: 172 AKAERIHLTKSKDLNNCQQRIMKDFGLAYTEKCVECRQRGEALMGAA 218
>PHYK2_ORYSA (Q5N9J9) Probable phytol kinase 2, chloroplast precursor (EC| 2.7.-.-) (Fragment) Length = 296 Score = 28.1 bits (61), Expect = 8.3 Identities = 19/54 (35%), Positives = 25/54 (46%) Frame = +1 Query: 223 PPAAAAGLSGPFDFSSMQSLLNDPSIKEMADQIARDPAFNQMAEQLQKGAQGAG 384 PPAAAA S FD + L+ D S ++ A P + +A L A AG Sbjct: 21 PPAAAAAASCSFDLPRPRRLVADGSRRKGTMAAAIPPEASGLAHDLGSAAVTAG 74
>PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)| Length = 815 Score = 28.1 bits (61), Expect = 8.3 Identities = 21/64 (32%), Positives = 27/64 (42%) Frame = +1 Query: 145 GDLPSGFTDESKSKKTEGSSNEGQGVPPAAAAGLSGPFDFSSMQSLLNDPSIKEMADQIA 324 G P G + T +SN Q + AAG G +SMQS N PS+ +A Sbjct: 399 GGNPGGGNSNNNGSNTSNASNNNQNPHLSPAAGRLGV--PTSMQS--NGPSVSSVASSSV 454 Query: 325 RDPA 336 PA Sbjct: 455 PSPA 458 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.310 0.129 0.364 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 53,115,211 Number of Sequences: 219361 Number of extensions: 983041 Number of successful extensions: 2594 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 2495 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2583 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits)
