ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart59h08 |
|---|---|
| Clone Library Name | barley_pub |
>BI1_ORYSA (Q9MBD8) Bax inhibitor 1 (BI-1) (OsBI-1)| Length = 249 Score = 170 bits (431), Expect = 6e-43 Identities = 87/112 (77%), Positives = 94/112 (83%), Gaps = 3/112 (2%) Frame = +2 Query: 80 MDAFYSTSSA---AASGWGHDSLKNFRLISPAVQSHLKLVYLTLCFALASSAVGAYLHIA 250 MDAFYSTSSA AASGWG+DSLKNFR ISPAVQSHLKLVYLTLC ALA+SAVGAYLH+A Sbjct: 1 MDAFYSTSSAYGAAASGWGYDSLKNFRQISPAVQSHLKLVYLTLCVALAASAVGAYLHVA 60 Query: 251 LNIGGMLTMLACVGTIAWMFSVPVYEERKRFXXXXXXXXXXXXSVGPLIELA 406 LNIGGMLTML CVG+IAW+FSVPV+EERKRF SVGPLI+LA Sbjct: 61 LNIGGMLTMLGCVGSIAWLFSVPVFEERKRFGILLAAALLEGASVGPLIKLA 112
>BI1_ARATH (Q9LD45) Bax inhibitor 1 (BI-1) (AtBI-1)| Length = 247 Score = 122 bits (306), Expect = 2e-28 Identities = 61/111 (54%), Positives = 74/111 (66%), Gaps = 2/111 (1%) Frame = +2 Query: 80 MDAFYS--TSSAAASGWGHDSLKNFRLISPAVQSHLKLVYLTLCFALASSAVGAYLHIAL 253 MDAF S S + W +DSLKNFR ISPAVQ+HLK VYLTLC AL +SA GAYLH+ Sbjct: 1 MDAFSSFFDSQPGSRSWSYDSLKNFRQISPAVQNHLKRVYLTLCCALVASAFGAYLHVLW 60 Query: 254 NIGGMLTMLACVGTIAWMFSVPVYEERKRFXXXXXXXXXXXXSVGPLIELA 406 NIGG+LT + C+GT+ W+ S P YE +KR SVGPLI++A Sbjct: 61 NIGGILTTIGCIGTMIWLLSCPPYEHQKRLSLLFVSAVLEGASVGPLIKVA 111
>BI1_PIG (Q66RM2) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| Length = 237 Score = 52.8 bits (125), Expect = 2e-07 Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 4/95 (4%) Frame = +2 Query: 131 DSLKNFRLISPAVQSHLKLVYLTLCFALASSAVGAYLHIALNI--GGMLTMLACVGTIAW 304 D+L F I+P+ Q HLK VY + + +A GAY+H+ G+L+ L +G + W Sbjct: 11 DALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTRFIQAGLLSALGSLGLMIW 70 Query: 305 MFSVPVYE--ERKRFXXXXXXXXXXXXSVGPLIEL 403 + + P E+KR +GP ++L Sbjct: 71 LMATPHSHETEQKRLGLLAGFAFLTGVGLGPALDL 105
>BI1_MOUSE (Q9D2C7) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| Length = 237 Score = 52.0 bits (123), Expect = 3e-07 Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 4/95 (4%) Frame = +2 Query: 131 DSLKNFRLISPAVQSHLKLVYLTLCFALASSAVGAYLHIALNI--GGMLTMLACVGTIAW 304 D+L F I+P+ Q HLK VY + + +A GAY+H+ + G+L+ L + + W Sbjct: 11 DALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTHFIQAGLLSALGSLALMIW 70 Query: 305 MFSVPVYE--ERKRFXXXXXXXXXXXXSVGPLIEL 403 + + P E+KR +GP +EL Sbjct: 71 LMATPHSHETEQKRLGLLAGFAFLTGVGLGPALEL 105
>BI1_PAROL (Q9IA79) Probable Bax inhibitor 1 (BI-1)| Length = 237 Score = 50.1 bits (118), Expect = 1e-06 Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 2/72 (2%) Frame = +2 Query: 131 DSLKNFRLISPAVQSHLKLVYLTLCFALASSAVGAYLHIALNI--GGMLTMLACVGTIAW 304 DSL F IS + Q HLK VY +L + +A G+Y+H+ + GGML++L +G + W Sbjct: 11 DSLFKFSQISHSTQVHLKNVYSSLAVCMFVAAAGSYVHVVTRLFQGGMLSVLGSLGMMFW 70 Query: 305 MFSVPVYEERKR 340 + P E ++ Sbjct: 71 LAMTPHNSETEK 82
>BI1_PONPY (Q5R7R1) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| Length = 237 Score = 48.9 bits (115), Expect = 3e-06 Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 4/94 (4%) Frame = +2 Query: 131 DSLKNFRLISPAVQSHLKLVYLTLCFALASSAVGAYLHIALNI--GGMLTMLACVGTIAW 304 D+L F I+P+ Q HLK VY + + +A GAY+H+ + G+L+ L + + W Sbjct: 11 DALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTHFIQAGLLSALGSLILMIW 70 Query: 305 MFSVPVYE--ERKRFXXXXXXXXXXXXSVGPLIE 400 + + P E+KR +GP +E Sbjct: 71 LMATPHSHETEQKRLGLLAGFAFLTGVGLGPALE 104
>BI1_HUMAN (P55061) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| (Transmembrane BAX inhibitor motif-containing protein 6) Length = 237 Score = 48.1 bits (113), Expect = 5e-06 Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 4/94 (4%) Frame = +2 Query: 131 DSLKNFRLISPAVQSHLKLVYLTLCFALASSAVGAYLHIALNI--GGMLTMLACVGTIAW 304 D+L F I+P+ Q HLK VY + + +A GAY+H+ + G+L+ L + + W Sbjct: 11 DALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHMVTHFIQAGLLSALGSLILMIW 70 Query: 305 MFSVPVYE--ERKRFXXXXXXXXXXXXSVGPLIE 400 + + P E+KR +GP +E Sbjct: 71 LMATPHSHETEQKRLGLLAGFAFLTGVGLGPALE 104
>BI1_RAT (P55062) Bax inhibitor 1 (BI-1) (Testis-enhanced gene transcript)| Length = 237 Score = 47.0 bits (110), Expect = 1e-05 Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 4/95 (4%) Frame = +2 Query: 131 DSLKNFRLISPAVQSHLKLVYLTLCFALASSAVGAYLHIALNI--GGMLTMLACVGTIAW 304 D+L F I+P+ Q HLK VY + + +A GAY+H+ G+L+ L + + Sbjct: 11 DALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHVVTRFIQAGLLSALGALALMIC 70 Query: 305 MFSVPVYE--ERKRFXXXXXXXXXXXXSVGPLIEL 403 + + P E+KR +GP +EL Sbjct: 71 LMATPHSHETEQKRLGLLAGFAFLTGVGLGPALEL 105
>SYP1_YEAST (P25623) Suppressor of yeast profilin deletion| Length = 870 Score = 30.4 bits (67), Expect = 1.0 Identities = 11/22 (50%), Positives = 16/22 (72%) Frame = +1 Query: 136 PQELPPDLPRRAVPPQARLPDS 201 P E+PP P+++ PP A+ PDS Sbjct: 444 PSEVPPSTPQQSSPPTAKEPDS 465
>BI1_DROME (Q9VSH3) Probable Bax inhibitor 1 (BI-1)| Length = 245 Score = 30.4 bits (67), Expect = 1.0 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 2/59 (3%) Frame = +2 Query: 161 PAVQSHLKLVYLTLCFALASSAVGAYLHIA--LNIGGMLTMLACVGTIAWMFSVPVYEE 331 P V+ HL VY+ L A++A+GA L + L++G +LA V T+ + + Y++ Sbjct: 25 PYVREHLSKVYMVLGSTAAATAMGAMLQMRDFLDLG----VLAAVATLVLVLGLHFYKD 79
>WRN_MOUSE (O09053) Werner syndrome ATP-dependent helicase homolog (EC| 3.6.1.-) Length = 1401 Score = 30.0 bits (66), Expect = 1.4 Identities = 18/71 (25%), Positives = 36/71 (50%) Frame = +2 Query: 47 DSIRRAGAGAGMDAFYSTSSAAASGWGHDSLKNFRLISPAVQSHLKLVYLTLCFALASSA 226 D +++ + G+ + S WGHD +FR++ ++++ L LV + A ASS+ Sbjct: 615 DLLQKLDSSIGITLIAVDEAHCISEWGHDFRSSFRMLG-SLKTALPLVPVIALSATASSS 673 Query: 227 VGAYLHIALNI 259 + + LN+ Sbjct: 674 IREDIISCLNL 684
>UBP3_SCHPO (O94269) Probable ubiquitin carboxyl-terminal hydrolase 3 (EC| 3.1.2.15) (Ubiquitin thioesterase 3) (Ubiquitin-specific processing protease 3) (Deubiquitinating enzyme 3) Length = 512 Score = 29.6 bits (65), Expect = 1.8 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = +2 Query: 26 EARPPRSDSIRRAGAGAGMDAFYSTSSAAASGW 124 + R P+SD G +G+D+F SS ASGW Sbjct: 256 DERNPKSDIKISNGIKSGLDSFDDQSSVEASGW 288
>CSF3R_HUMAN (Q99062) Granulocyte colony-stimulating factor receptor precursor| (G-CSF-R) (CD114 antigen) Length = 836 Score = 29.6 bits (65), Expect = 1.8 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 8/63 (12%) Frame = +2 Query: 155 ISPAVQSHLKLVYLTLCFALASSAV--------GAYLHIALNIGGMLTMLACVGTIAWMF 310 + PA H+ L+ + A S+ + G+ LHI L + G+L +L C+ AW+ Sbjct: 590 LEPASLYHIHLMAASQAGATNSTVLTLMTLTPEGSELHIILGLFGLLLLLTCLCGTAWLC 649 Query: 311 SVP 319 P Sbjct: 650 CSP 652
>TMPSD_MOUSE (Q5U405) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic| serine protease) (Membrane-type mosaic serine protease) Length = 543 Score = 28.9 bits (63), Expect = 3.0 Identities = 25/94 (26%), Positives = 36/94 (38%) Frame = -1 Query: 405 ASSIRGPTEAPSRRAAPISSPNLFLSS*TGTENIQAIVPTQASIVSIPPMFRAMCR*APT 226 +S R P +A R +P +P + T + A P QAS PP + R +P Sbjct: 9 SSPARTPPQASPARTSPARAPPQASPARTPPQASPARTPPQASPARAPPPQASPARASPA 68 Query: 225 ADEASAKHRVR*TSLRWDCTAGEIRRKFLRESWP 124 S R +S R T R +L + P Sbjct: 69 RAPPSRSSSGRSSSARSASTTSSPTRVYLVRATP 102
>DOC2B_HUMAN (Q14184) Double C2-like domain-containing protein beta (Doc2-beta)| Length = 412 Score = 28.5 bits (62), Expect = 4.0 Identities = 13/21 (61%), Positives = 14/21 (66%), Gaps = 1/21 (4%) Frame = +1 Query: 127 PRLPQELPPDL-PRRAVPPQA 186 PR P+ LPPD PR A PP A Sbjct: 38 PRFPRGLPPDAGPRAAAPPDA 58
>ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein (AT motif-binding| factor) (AT-binding transcription factor 1) Length = 3726 Score = 28.5 bits (62), Expect = 4.0 Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 3/28 (10%) Frame = +1 Query: 127 PRLPQELPPDLPR---RAVPPQARLPDS 201 P+LPQ P LP+ +A PPQ LP S Sbjct: 2479 PKLPQPAAPSLPQPPPQAPPPQCPLPQS 2506
>BTUB_PHOPR (Q6LLU3) Vitamin B12 transporter btuB precursor (Cobalamin| receptor) (Outer membrane cobalamin translocator) Length = 606 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 5/37 (13%) Frame = +2 Query: 47 DSIRRAGAGAGMDAFYSTSSAAA-----SGWGHDSLK 142 +S+ AG G D FY + A SGWG +LK Sbjct: 157 ESVAEVTAGGGSDGFYQLGGSVAGGLGESGWGKIALK 193
>SLIK3_MOUSE (Q810B9) SLIT and NTRK-like protein 3 precursor| Length = 980 Score = 28.1 bits (61), Expect = 5.2 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = -2 Query: 377 PLPGGLHPSAAQTSSSPHRLAP 312 P PG HP+ TS+SP+ +P Sbjct: 626 PQPGDYHPNGRPTSASPYEFSP 647
>HUTH_HUMAN (P42357) Histidine ammonia-lyase (EC 4.3.1.3) (Histidase)| Length = 657 Score = 28.1 bits (61), Expect = 5.2 Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 4/69 (5%) Frame = +1 Query: 157 LPRRAVPPQARLPDSMLCTGLICRGCLPTHCPEHRRDADNARLCRNYRLDVLGASL*GEE 336 + R P + LP ++ G + G + HC ++N LC +D L S E+ Sbjct: 471 IERLCNPSLSELPAFLVAEGGLNSGFMIAHCTAAALVSENKALCHPSSVDSLSTSAATED 530 Query: 337 EV----WAA 351 V WAA Sbjct: 531 HVSMGGWAA 539
>RPOA_PRRSB (Q8B912) Replicase polyprotein 1ab (ORF1ab polyprotein) [Includes:| Replicase polyprotein 1a (ORF1a)] [Contains: Nsp1-alpha papain-like cysteine proteinase (EC 3.4.22.-) (PCP1-alpha); Nsp1-beta papain-like cysteine proteinase (EC 3.4.22.-) (PCP Length = 3963 Score = 27.7 bits (60), Expect = 6.8 Identities = 22/72 (30%), Positives = 32/72 (44%) Frame = +2 Query: 71 GAGMDAFYSTSSAAASGWGHDSLKNFRLISPAVQSHLKLVYLTLCFALASSAVGAYLHIA 250 G G + + T+ AA G+G SL RL L L L F L A+ + ++ Sbjct: 1610 GTGTNDPWCTNPFAAPGYGPGSLCTSRLCISQHGLTLPLTALVAGFGLQEIALVVLIFVS 1669 Query: 251 LNIGGMLTMLAC 286 + GGM L+C Sbjct: 1670 M--GGMAHRLSC 1679
>K1683_HUMAN (Q9H0B3) Protein KIAA1683| Length = 1180 Score = 27.7 bits (60), Expect = 6.8 Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 6/57 (10%) Frame = -2 Query: 362 LHPSAAQTSSSPHRLAPRTSRR*FRHKRALSAS------RRCSGQCVGKHPRQMRPV 210 +HP+A++T + P + P T R + +L AS + C G + K P QM PV Sbjct: 405 VHPTASRTGT-PRQTCPATITAKNRPQVSLLASIMKSLPQVCPGPAMAKTPPQMHPV 460
>ENV_GALV (P21415) Env polyprotein precursor [Contains: Coat protein GP70;| Spike protein p15E] Length = 667 Score = 27.7 bits (60), Expect = 6.8 Identities = 14/25 (56%), Positives = 15/25 (60%) Frame = +1 Query: 127 PRLPQELPPDLPRRAVPPQARLPDS 201 PR LPP LP R PP + LPDS Sbjct: 277 PRTSLALPPPLPPREAPPPS-LPDS 300
>OPSG_CAVPO (Q9R024) Green-sensitive opsin (Green cone photoreceptor pigment)| Length = 364 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = +2 Query: 161 PAVQSHLKLVYLTLCFALASSAVGAYLHIALNI 259 P VQS++ ++ +T C S V YLH+ L I Sbjct: 214 PGVQSYMMVLMVTCCITPLSIIVLCYLHVWLAI 246
>ZN207_HUMAN (O43670) Zinc finger protein 207| Length = 478 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/39 (30%), Positives = 21/39 (53%) Frame = +1 Query: 127 PRLPQELPPDLPRRAVPPQARLPDSMLCTGLICRGCLPT 243 P +P +PP +PR +PP + ++ G++ R PT Sbjct: 203 PGMPPGMPPPVPRPGIPPMTQ-AQAVSAPGILNRPPAPT 240
>POK11_HUMAN (P87893) HERV-K_22q11.21 provirus ancestral Pol protein (HERV-K101| Pol protein) [Includes: Reverse transcriptase (RT) (EC 2.7.7.49)] Length = 254 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = -3 Query: 403 KLNQRSNRSPFQEGCTHQQPKPLPLLIDWHREHP 302 K +R NR F T + PKP+PL W E P Sbjct: 2 KSKKRRNRVSFLGAATIEPPKPIPL--TWKTEKP 33
>POK5_HUMAN (P63132) HERV-K_19p13.11 provirus ancestral Pol protein (HERV-K113| Pol protein) [Includes: Reverse transcriptase (RT) (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4) (RNase H); Integrase (IN)] Length = 956 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = -3 Query: 403 KLNQRSNRSPFQEGCTHQQPKPLPLLIDWHREHP 302 K +R NR F T + PKP+PL W E P Sbjct: 2 KSRKRRNRVSFLGAATVEPPKPIPL--TWKTEKP 33
>POK12_HUMAN (P63135) HERV-K_1q22 provirus ancestral Pol protein (HERV-K102 Pol| protein) (HERV-K(III) Pol protein) [Includes: Reverse transcriptase (RT) (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4) (RNase H); Integrase (IN)] Length = 1459 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = -3 Query: 403 KLNQRSNRSPFQEGCTHQQPKPLPLLIDWHREHP 302 K +R NR F T + PKP+PL W E P Sbjct: 2 KSRKRRNRLSFLGAATVEPPKPIPL--TWKTEKP 33
>POK4_HUMAN (P63128) HERV-K_6q14.1 provirus ancestral Pol protein (HERV-K109| Pol protein) (HERV-K(C6) Pol protein) Length = 194 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = -3 Query: 403 KLNQRSNRSPFQEGCTHQQPKPLPLLIDWHREHP 302 K +R NR F T + PKP+PL W E P Sbjct: 2 KSKKRRNRVSFLGAATIEPPKPIPL--TWKTEKP 33
>POK9_HUMAN (P63134) HERV-K_5q13.3 provirus ancestral Pol protein (HERV-K104| Pol protein) [Includes: Reverse transcriptase (RT) (EC 2.7.7.49)] Length = 483 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = -3 Query: 403 KLNQRSNRSPFQEGCTHQQPKPLPLLIDWHREHP 302 K +R NR F T + PKP+PL W E P Sbjct: 2 KSKKRRNRVSFLGAATVEPPKPIPL--TWKTEKP 33
>POK3_HUMAN (Q9WJR5) HERV-K_19q12 provirus ancestral Pol protein (HERV-K(C19)| Pol protein) [Includes: Reverse transcriptase (RT) (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4) (RNase H); Integrase (IN)] Length = 959 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = -3 Query: 403 KLNQRSNRSPFQEGCTHQQPKPLPLLIDWHREHP 302 K +R NR F T + PKP+PL W E P Sbjct: 2 KSKKRRNRVSFLGAATVEPPKPIPL--TWKTEKP 33
>POK17_HUMAN (P63136) HERV-K_11q22.1 provirus ancestral Pol protein [Includes:| Reverse transcriptase (RT) (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4) (RNase H); Integrase (IN)] Length = 954 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = -3 Query: 403 KLNQRSNRSPFQEGCTHQQPKPLPLLIDWHREHP 302 K +R NR F T + PKP+PL W E P Sbjct: 2 KSKKRRNRVSFLGAATVEPPKPIPL--TWKTEKP 33
>POK20_HUMAN (Q9UQG0) HERV-K_3q27.3 provirus ancestral Pol protein [Includes:| Reverse transcriptase (RT) (EC 2.7.7.49); Ribonuclease H (EC 3.1.26.4) (RNase H); Integrase (IN)] Length = 969 Score = 27.3 bits (59), Expect = 8.9 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = -3 Query: 403 KLNQRSNRSPFQEGCTHQQPKPLPLLIDWHREHP 302 K +R NR F T + PKP+PL W E P Sbjct: 2 KSRKRRNRVSFLGAATVEPPKPIPL--TWKTEKP 33
>BAG3_HUMAN (O95817) BAG family molecular chaperone regulator 3 (BCL-2-binding| athanogene-3) (BAG-3) (Bcl-2-binding protein Bis) (Docking protein CAIR-1) Length = 575 Score = 27.3 bits (59), Expect = 8.9 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = +2 Query: 20 ACEARPPRSDSIRRAGAGAGMDAFYSTSSAAASGWGHDSLKNFRL 154 A A+PP S R+ + A D S+SSA+ G SL + +L Sbjct: 157 AAAAQPPASHGPERSQSPAASDCSSSSSSASLPSSGRSSLGSHQL 201 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,363,782 Number of Sequences: 219361 Number of extensions: 1060316 Number of successful extensions: 4333 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 3862 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4323 length of database: 80,573,946 effective HSP length: 111 effective length of database: 56,224,875 effective search space used: 1349397000 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
