ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart58h12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_188414.1| Oryza sativa (japonica cultivar-group), Ozsa8140 predicted mRNA Length = 2007 Score = 65.9 bits (33), Expect = 4e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 120 agtgcgagcagtcgtacggcttccttccgtgcaccaccaccgtgttcgg 168 ||||||||||||||||||| ||||| || ||||||||||||||| |||| Sbjct: 209 agtgcgagcagtcgtacgggttcctcccctgcaccaccaccgtgctcgg 257
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 65.9 bits (33), Expect = 4e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 120 agtgcgagcagtcgtacggcttccttccgtgcaccaccaccgtgttcgg 168 ||||||||||||||||||| ||||| || ||||||||||||||| |||| Sbjct: 6133447 agtgcgagcagtcgtacgggttcctcccctgcaccaccaccgtgctcgg 6133495 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ctcctcctcgccggccaccg 107 |||||||||||||||||||| Sbjct: 3051734 ctcctcctcgccggccaccg 3051715 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 96 cgccggccaccgcggcggc 114 ||||||||||||||||||| Sbjct: 1801655 cgccggccaccgcggcggc 1801673
>dbj|AP002092.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031E09 Length = 176349 Score = 65.9 bits (33), Expect = 4e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 120 agtgcgagcagtcgtacggcttccttccgtgcaccaccaccgtgttcgg 168 ||||||||||||||||||| ||||| || ||||||||||||||| |||| Sbjct: 157804 agtgcgagcagtcgtacgggttcctcccctgcaccaccaccgtgctcgg 157852
>dbj|AK066468.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066B01, full insert sequence Length = 2023 Score = 65.9 bits (33), Expect = 4e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 120 agtgcgagcagtcgtacggcttccttccgtgcaccaccaccgtgttcgg 168 ||||||||||||||||||| ||||| || ||||||||||||||| |||| Sbjct: 246 agtgcgagcagtcgtacgggttcctcccctgcaccaccaccgtgctcgg 294
>gb|AC091775.10| Oryza sativa chromosome 3 BAC OSJNBa0004G17 genomic sequence, complete sequence Length = 139074 Score = 46.1 bits (23), Expect = 0.034 Identities = 29/31 (93%) Strand = Plus / Minus Query: 88 ctcctcctcgccggccaccgcggcggccgag 118 |||||||||||||||| |||||||| ||||| Sbjct: 118023 ctcctcctcgccggccgccgcggcgaccgag 117993
>ref|XM_469455.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2735 Score = 46.1 bits (23), Expect = 0.034 Identities = 29/31 (93%) Strand = Plus / Plus Query: 88 ctcctcctcgccggccaccgcggcggccgag 118 |||||||||||||||| |||||||| ||||| Sbjct: 43 ctcctcctcgccggccgccgcggcgaccgag 73
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.034 Identities = 29/31 (93%) Strand = Plus / Plus Query: 88 ctcctcctcgccggccaccgcggcggccgag 118 |||||||||||||||| |||||||| ||||| Sbjct: 28035084 ctcctcctcgccggccgccgcggcgaccgag 28035114 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 90 cctcctcgccggccaccgc 108 ||||||||||||||||||| Sbjct: 16566850 cctcctcgccggccaccgc 16566832
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.034 Identities = 29/31 (93%) Strand = Plus / Plus Query: 88 ctcctcctcgccggccaccgcggcggccgag 118 |||||||||||||||| |||||||| ||||| Sbjct: 28126408 ctcctcctcgccggccgccgcggcgaccgag 28126438 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 90 cctcctcgccggccaccgc 108 ||||||||||||||||||| Sbjct: 16560483 cctcctcgccggccaccgc 16560465
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.14 Identities = 22/22 (100%) Strand = Plus / Plus Query: 88 ctcctcctcgccggccaccgcg 109 |||||||||||||||||||||| Sbjct: 22273704 ctcctcctcgccggccaccgcg 22273725 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 gccgccaccccgtcctcctccacc 49 ||||||||| |||||||||||||| Sbjct: 8049180 gccgccacctcgtcctcctccacc 8049157 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 tcgccggccaccgcggcggc 114 |||||||||||||||||||| Sbjct: 4637092 tcgccggccaccgcggcggc 4637111 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 28 cgccaccccgtcctcctcc 46 ||||||||||||||||||| Sbjct: 4887578 cgccaccccgtcctcctcc 4887596
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.14 Identities = 22/22 (100%) Strand = Plus / Plus Query: 88 ctcctcctcgccggccaccgcg 109 |||||||||||||||||||||| Sbjct: 22202049 ctcctcctcgccggccaccgcg 22202070 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 gccgccaccccgtcctcctccacc 49 ||||||||| |||||||||||||| Sbjct: 8049061 gccgccacctcgtcctcctccacc 8049038 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 tcgccggccaccgcggcggc 114 |||||||||||||||||||| Sbjct: 4637073 tcgccggccaccgcggcggc 4637092 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 28 cgccaccccgtcctcctcc 46 ||||||||||||||||||| Sbjct: 4887560 cgccaccccgtcctcctcc 4887578
>emb|AL731741.5|CNS08C7Q Oryza sativa chromosome 12, . BAC OJ1298_D03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109610 Score = 44.1 bits (22), Expect = 0.14 Identities = 22/22 (100%) Strand = Plus / Minus Query: 88 ctcctcctcgccggccaccgcg 109 |||||||||||||||||||||| Sbjct: 88050 ctcctcctcgccggccaccgcg 88029
>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome Length = 2427734 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ctcatctccgacggcatggcc 28 ||||||||||||||||||||| Sbjct: 1935493 ctcatctccgacggcatggcc 1935473
>gb|AE012255.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 163 of 460 of the complete genome Length = 12201 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 tcctcgccggccaccgcggcg 112 ||||||||||||||||||||| Sbjct: 5683 tcctcgccggccaccgcggcg 5703
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Plus Query: 14 tccgacggcatggccgccacc 34 ||||||||||||||||||||| Sbjct: 3244116 tccgacggcatggccgccacc 3244136
>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome Length = 230138 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 tcctcctccaccctcgcgtcc 58 ||||||||||||||||||||| Sbjct: 4540 tcctcctccaccctcgcgtcc 4520
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Minus Query: 96 cgccggccaccgcggcggccg 116 ||||||||||||||||||||| Sbjct: 1698541 cgccggccaccgcggcggccg 1698521 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 64 gtcctcgggcggcatccgcctca 86 |||||||||||||| |||||||| Sbjct: 4432279 gtcctcgggcggcaaccgcctca 4432301 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 98 ccggccaccgcggcggccg 116 ||||||||||||||||||| Sbjct: 1074179 ccggccaccgcggcggccg 1074197
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 tcctcgccggccaccgcggcg 112 ||||||||||||||||||||| Sbjct: 3237706 tcctcgccggccaccgcggcg 3237686
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Plus Query: 96 cgccggccaccgcggcggccg 116 ||||||||||||||||||||| Sbjct: 3607144 cgccggccaccgcggcggccg 3607164 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 90 cctcctcgccggccaccgcggcg 112 |||||||| |||||||||||||| Sbjct: 28571750 cctcctcgtcggccaccgcggcg 28571772
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 cggccaccgcggcggccgagg 119 ||||||||||||||||||||| Sbjct: 1820172 cggccaccgcggcggccgagg 1820192
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 0.53 Identities = 24/25 (96%) Strand = Plus / Minus Query: 88 ctcctcctcgccggccaccgcggcg 112 |||||||||||||||| |||||||| Sbjct: 197275 ctcctcctcgccggccgccgcggcg 197251
>dbj|AP005804.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0085K21 Length = 180714 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Plus Query: 96 cgccggccaccgcggcggccg 116 ||||||||||||||||||||| Sbjct: 88434 cgccggccaccgcggcggccg 88454
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 0.53 Identities = 21/21 (100%) Strand = Plus / Minus Query: 13 ctccgacggcatggccgccac 33 ||||||||||||||||||||| Sbjct: 805634 ctccgacggcatggccgccac 805614 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 92 tcctcgccggccaccgcggcggcc 115 ||||||||||||||| |||||||| Sbjct: 3825694 tcctcgccggccaccacggcggcc 3825717 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 94 ctcgccggccaccgcggcg 112 ||||||||||||||||||| Sbjct: 3317644 ctcgccggccaccgcggcg 3317626 Score = 38.2 bits (19), Expect = 8.3 Identities = 25/27 (92%) Strand = Plus / Plus Query: 86 aactcctcctcgccggccaccgcggcg 112 ||||||| ||||| ||||||||||||| Sbjct: 2110303 aactcctgctcgcgggccaccgcggcg 2110329
>gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, complete sequence Length = 491611 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 ggccaccgcggcggccgagg 119 |||||||||||||||||||| Sbjct: 54005 ggccaccgcggcggccgagg 54024
>ref|NM_179686.1| Arabidopsis thaliana ATGRP7; RNA binding AT2G21660 (ATGRP7) transcript variant AT2G21660.2 mRNA, complete cds Length = 765 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 tcctcctccaccctcgcgtc 57 |||||||||||||||||||| Sbjct: 396 tcctcctccaccctcgcgtc 377
>ref|NM_127738.2| Arabidopsis thaliana ATGRP7; RNA binding AT2G21660 (ATGRP7) transcript variant AT2G21660.1 mRNA, complete cds Length = 816 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 tcctcctccaccctcgcgtc 57 |||||||||||||||||||| Sbjct: 447 tcctcctccaccctcgcgtc 428
>ref|NM_184450.2| Oryza sativa (japonica cultivar-group), mRNA Length = 911 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ctcctcctcgccggccaccg 107 |||||||||||||||||||| Sbjct: 418 ctcctcctcgccggccaccg 437
>ref|XM_515460.1| PREDICTED: Pan troglodytes LOC459216 (LOC459216), mRNA Length = 910 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 96 cgccggccaccgcggcggcc 115 |||||||||||||||||||| Sbjct: 264 cgccggccaccgcggcggcc 283
>gb|BT017258.1| Zea mays clone EL01N0308E04.c mRNA sequence Length = 1137 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gcgagcagtcgtacggcttc 142 |||||||||||||||||||| Sbjct: 880 gcgagcagtcgtacggcttc 899
>ref|XM_954183.1| Neurospora crassa OR74A hypothetical protein (NCU06929.1) partial mRNA Length = 3165 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 gccgccaccccgtcctcctccacc 49 ||||||||| |||||||||||||| Sbjct: 2514 gccgccaccacgtcctcctccacc 2491
>ref|XM_327214.1| Neurospora crassa OR74A hypothetical protein (NCU06929.1) partial mRNA Length = 3165 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 26 gccgccaccccgtcctcctccacc 49 ||||||||| |||||||||||||| Sbjct: 2514 gccgccaccacgtcctcctccacc 2491
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 gccggccaccgcggcggccg 116 |||||||||||||||||||| Sbjct: 1606403 gccggccaccgcggcggccg 1606384
>gb|AC135923.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0479C09, complete sequence Length = 156776 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 tcgccggccaccgcggcggc 114 |||||||||||||||||||| Sbjct: 117282 tcgccggccaccgcggcggc 117263
>gb|AC135919.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0014F09, complete sequence Length = 151345 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 tcgccggccaccgcggcggc 114 |||||||||||||||||||| Sbjct: 12931 tcgccggccaccgcggcggc 12912
>emb|X14112.1|HE1CG Human herpesvirus 1 complete genome Length = 152261 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 39 cctcctccaccctcgcgtcccccc 62 |||||||||||| ||||||||||| Sbjct: 145811 cctcctccacccccgcgtcccccc 145834
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 cctcgggcggcatccgcctc 85 |||||||||||||||||||| Sbjct: 4475586 cctcgggcggcatccgcctc 4475605
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cggccaccgcggcggccgag 118 |||||||||||||||||||| Sbjct: 93195 cggccaccgcggcggccgag 93214
>emb|Z14987.1|ATGRP7 A.thaliana mRNA for glycine rich protein Length = 757 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 tcctcctccaccctcgcgtc 57 |||||||||||||||||||| Sbjct: 430 tcctcctccaccctcgcgtc 411
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 ggccaccgcggcggccgagg 119 |||||||||||||||||||| Sbjct: 1620569 ggccaccgcggcggccgagg 1620588
>emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete genome; segment 14/16 Length = 346287 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 cggccaccgcggcggccgag 118 |||||||||||||||||||| Sbjct: 302011 cggccaccgcggcggccgag 301992
>emb|BX640435.1| Bordetella parapertussis strain 12822, complete genome; segment 13/14 Length = 346259 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 cggccaccgcggcggccgag 118 |||||||||||||||||||| Sbjct: 220897 cggccaccgcggcggccgag 220878
>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12 Length = 348171 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 cggccaccgcggcggccgag 118 |||||||||||||||||||| Sbjct: 27806 cggccaccgcggcggccgag 27825
>gb|AC007119.6| Arabidopsis thaliana chromosome 2 clone F2G1 map mi238, complete sequence Length = 54433 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 tcctcctccaccctcgcgtc 57 |||||||||||||||||||| Sbjct: 10370 tcctcctccaccctcgcgtc 10351
>gb|AY072523.1| Arabidopsis thaliana glycine-rich RNA binding protein (At2g21660; F2G1.7) mRNA, complete cds Length = 378 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 tcctcctccaccctcgcgtc 57 |||||||||||||||||||| Sbjct: 207 tcctcctccaccctcgcgtc 188
>gb|AF428381.1|AF428381 Arabidopsis thaliana At2g22292/F2G1.7_ mRNA, complete cds Length = 784 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 tcctcctccaccctcgcgtc 57 |||||||||||||||||||| Sbjct: 447 tcctcctccaccctcgcgtc 428
>gb|AY054284.1| Arabidopsis thaliana At2g21660/F2G1.7 mRNA, complete cds Length = 812 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 tcctcctccaccctcgcgtc 57 |||||||||||||||||||| Sbjct: 447 tcctcctccaccctcgcgtc 428
>gb|AY129334.1| Mycobacteriophage Rosebush, complete genome Length = 67480 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ccgacggcatggccgccacc 34 |||||||||||||||||||| Sbjct: 52520 ccgacggcatggccgccacc 52539
>gb|AY042826.1| Arabidopsis thaliana glycine-rich RNA binding protein (At2g21660; F2G1.7) mRNA, complete cds Length = 1118 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 tcctcctccaccctcgcgtc 57 |||||||||||||||||||| Sbjct: 756 tcctcctccaccctcgcgtc 737
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ccgacggcatggccgccacc 34 |||||||||||||||||||| Sbjct: 3805806 ccgacggcatggccgccacc 3805787
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 atccgcctcaactcctcctc 96 |||||||||||||||||||| Sbjct: 25516978 atccgcctcaactcctcctc 25516997 Score = 38.2 bits (19), Expect = 8.3 Identities = 25/27 (92%) Strand = Plus / Plus Query: 88 ctcctcctcgccggccaccgcggcggc 114 ||||||||||||||| || |||||||| Sbjct: 1989086 ctcctcctcgccggcgacggcggcggc 1989112 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 93 cctcgccggccaccgcggc 111 ||||||||||||||||||| Sbjct: 820447 cctcgccggccaccgcggc 820465
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 tcgccggccaccgcggcggc 114 |||||||||||||||||||| Sbjct: 11791642 tcgccggccaccgcggcggc 11791623
>emb|BX819936.1|CNS0AAC9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS50ZH04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 730 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 tcctcctccaccctcgcgtc 57 |||||||||||||||||||| Sbjct: 428 tcctcctccaccctcgcgtc 409
>emb|BX821776.1|CNS0A97G Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL73ZA05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 731 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 tcctcctccaccctcgcgtc 57 |||||||||||||||||||| Sbjct: 412 tcctcctccaccctcgcgtc 393
>emb|BX821373.1|CNS0A98T Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL37ZC06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 800 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 tcctcctccaccctcgcgtc 57 |||||||||||||||||||| Sbjct: 434 tcctcctccaccctcgcgtc 415
>emb|BX821372.1|CNS0A98S Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL37ZC05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 772 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 tcctcctccaccctcgcgtc 57 |||||||||||||||||||| Sbjct: 433 tcctcctccaccctcgcgtc 414
>emb|BX821551.1|CNS0A92D Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL52ZC04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 796 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 tcctcctccaccctcgcgtc 57 |||||||||||||||||||| Sbjct: 431 tcctcctccaccctcgcgtc 412
>gb|AY085214.1| Arabidopsis thaliana clone 13879 mRNA, complete sequence Length = 810 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 tcctcctccaccctcgcgtc 57 |||||||||||||||||||| Sbjct: 447 tcctcctccaccctcgcgtc 428
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 cctcgccggccaccgcggcggccg 116 |||| ||||||||||||||||||| Sbjct: 1259224 cctccccggccaccgcggcggccg 1259247
>dbj|AP003225.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0011G08 Length = 139490 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ctcctcctcgccggccaccg 107 |||||||||||||||||||| Sbjct: 133251 ctcctcctcgccggccaccg 133232
>dbj|AP003573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0523F01 Length = 146419 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 atccgcctcaactcctcctc 96 |||||||||||||||||||| Sbjct: 35295 atccgcctcaactcctcctc 35314
>emb|X00428.1|HEHS08 Herpes simplex type 1, 3' co-terminal family of mRNAs Length = 2400 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 cctcctccaccctcgcgtcccccc 62 |||||||||||| ||||||||||| Sbjct: 433 cctcctccacccccgcgtcccccc 410
>dbj|AK121564.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034J16, full insert sequence Length = 1369 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 atccgcctcaactcctcctc 96 |||||||||||||||||||| Sbjct: 185 atccgcctcaactcctcctc 166
>dbj|AK109233.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-F05, full insert sequence Length = 911 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 ctcctcctcgccggccaccg 107 |||||||||||||||||||| Sbjct: 418 ctcctcctcgccggccaccg 437
>dbj|AK105986.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-G08, full insert sequence Length = 1047 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 tcgccggccaccgcggcggc 114 |||||||||||||||||||| Sbjct: 329 tcgccggccaccgcggcggc 310
>dbj|AK105817.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-C12, full insert sequence Length = 1334 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 atccgcctcaactcctcctc 96 |||||||||||||||||||| Sbjct: 184 atccgcctcaactcctcctc 165
>dbj|AK073309.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033029G06, full insert sequence Length = 1014 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 tcgccggccaccgcggcggc 114 |||||||||||||||||||| Sbjct: 421 tcgccggccaccgcggcggc 402
>gb|AY104257.1| Zea mays PCO144021 mRNA sequence Length = 1213 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gcgagcagtcgtacggcttc 142 |||||||||||||||||||| Sbjct: 991 gcgagcagtcgtacggcttc 1010
>ref|NM_001016854.2| Xenopus tropicalis hypothetical protein LOC549608 (LOC549608), mRNA Length = 2084 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 gccgccaccccgtcctcctccacc 49 ||||||||||| |||||||||||| Sbjct: 977 gccgccaccccctcctcctccacc 1000
>emb|CR855419.2| Xenopus tropicalis finished cDNA, clone TNeu121a17 Length = 2084 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 gccgccaccccgtcctcctccacc 49 ||||||||||| |||||||||||| Sbjct: 977 gccgccaccccctcctcctccacc 1000
>gb|BC090140.1| Xenopus tropicalis hypothetical protein LOC549608, mRNA (cDNA clone IMAGE:6994149), partial cds Length = 1408 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 gccgccaccccgtcctcctccacc 49 ||||||||||| |||||||||||| Sbjct: 295 gccgccaccccctcctcctccacc 318
>gb|AY944529.1| Unidentified soil organism clone XXV-23 from Australia environmental-sample Length = 841 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 caactcctcctcgccggcca 104 |||||||||||||||||||| Sbjct: 331 caactcctcctcgccggcca 350
>emb|AL732531.3|CNS08C96 Oryza sativa chromosome 12, . BAC OJ1005_G05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151117 Score = 40.1 bits (20), Expect = 2.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 26 gccgccaccccgtcctcctccacc 49 ||||||||| |||||||||||||| Sbjct: 94498 gccgccacctcgtcctcctccacc 94521
>emb|AL928750.3|CNS08CBN Oryza sativa chromosome 12, . BAC OSJNBa0063C08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 147355 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 tcgccggccaccgcggcggc 114 |||||||||||||||||||| Sbjct: 115035 tcgccggccaccgcggcggc 115016
>gb|L00648.1|ATHRBPA Arabidopsis thaliana RNA-binding protein mRNA, complete cds Length = 757 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 tcctcctccaccctcgcgtc 57 |||||||||||||||||||| Sbjct: 430 tcctcctccaccctcgcgtc 411
>gb|L04172.1|ATHCCRA Arabidopsis thaliana Ccr2 mRNA, partial ORF Length = 924 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 tcctcctccaccctcgcgtc 57 |||||||||||||||||||| Sbjct: 566 tcctcctccaccctcgcgtc 547
>dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0433F09 Length = 150150 Score = 40.1 bits (20), Expect = 2.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ctcctcctcgccggccaccg 107 |||||||||||||||||||| Sbjct: 19774 ctcctcctcgccggccaccg 19755
>ref|NM_184257.1| Oryza sativa (japonica cultivar-group), mRNA Length = 804 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 96 cgccggccaccgcggcggc 114 ||||||||||||||||||| Sbjct: 484 cgccggccaccgcggcggc 466
>ref|XM_467266.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1023 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 90 cctcctcgccggccaccgcggcg 112 |||||||| |||||||||||||| Sbjct: 519 cctcctcgtcggccaccgcggcg 541
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 46 caccctcgcgtcccccctg 64 ||||||||||||||||||| Sbjct: 249384 caccctcgcgtcccccctg 249402
>gb|AC134886.5| Oryza sativa chromosome 3 BAC OSJNBa0002D18 genomic sequence, complete sequence Length = 145714 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 90 cctcctcgccggccaccgc 108 ||||||||||||||||||| Sbjct: 17482 cctcctcgccggccaccgc 17500
>gb|AC150698.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0072P10, complete sequence Length = 147540 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 96 cgccggccaccgcggcggc 114 ||||||||||||||||||| Sbjct: 54298 cgccggccaccgcggcggc 54280
>gb|AC134624.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041I05, complete sequence Length = 148785 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 96 cgccggccaccgcggcggc 114 ||||||||||||||||||| Sbjct: 104214 cgccggccaccgcggcggc 104196
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 95 tcgccggccaccgcggcggccga 117 |||||||||| |||||||||||| Sbjct: 2971920 tcgccggccagcgcggcggccga 2971942
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 11 atctccgacggcatggccg 29 ||||||||||||||||||| Sbjct: 4069398 atctccgacggcatggccg 4069380
>gb|AC147336.2| Pan troglodytes BAC clone CH251-70I12 from Y, complete sequence Length = 194849 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 30 ccaccccgtcctcctccaccctc 52 ||||||| ||||||||||||||| Sbjct: 24092 ccaccccttcctcctccaccctc 24114
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 19 cggcatggccgccaccccg 37 ||||||||||||||||||| Sbjct: 979771 cggcatggccgccaccccg 979753
>gb|AY458649.1| Uncultured bacterium 582 clone EBAC080-L028H02 genomic sequence Length = 145153 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 cggctcatctccgacggca 23 ||||||||||||||||||| Sbjct: 76043 cggctcatctccgacggca 76061
>gb|AC146239.3| Pan troglodytes BAC clone CH251-176K11 from Y, complete sequence Length = 180132 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 30 ccaccccgtcctcctccaccctc 52 ||||||| ||||||||||||||| Sbjct: 115529 ccaccccttcctcctccaccctc 115551
>gb|AY445835.1| Bambusa oldhamii sucrose-phosphate synthase mRNA, complete cds Length = 3225 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 96 cgccggccaccgcggcggccgag 118 |||||||| |||||||||||||| Sbjct: 94 cgccggcccccgcggcggccgag 72
>gb|AC145509.2| Gasterosteus aculeatus clone CH213-128O17, complete sequence Length = 213989 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 30 ccaccccgtcctcctccac 48 ||||||||||||||||||| Sbjct: 60641 ccaccccgtcctcctccac 60623
>emb|AL596224.10| Human DNA sequence from clone RP11-26F12 on chromosome 1 Contains part of the CSMD2 gene for CUB and Sushi multiple domains 2, complete sequence Length = 114784 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 gcatggccgccaccccgtc 39 ||||||||||||||||||| Sbjct: 33252 gcatggccgccaccccgtc 33270
>ref|XM_968908.1| PREDICTED: Tribolium castaneum similar to CG9453-PJ, isoform J (LOC662831), mRNA Length = 1244 Score = 38.2 bits (19), Expect = 8.3 Identities = 25/27 (92%) Strand = Plus / Minus Query: 24 tggccgccaccccgtcctcctccaccc 50 ||||| ||||||||||||| ||||||| Sbjct: 1030 tggccaccaccccgtcctcatccaccc 1004
>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13 Length = 346051 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 95 tcgccggccaccgcggcggccga 117 |||||||||| |||||||||||| Sbjct: 204098 tcgccggccagcgcggcggccga 204120
>emb|CR407704.10| Zebrafish DNA sequence from clone CH211-195G8 in linkage group 17, complete sequence Length = 146938 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 27 ccgccaccccgtcctcctccacc 49 |||||||||| |||||||||||| Sbjct: 98755 ccgccaccccctcctcctccacc 98777
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 92 tcctcgccggccaccgcggcggc 114 |||||||||||||||| |||||| Sbjct: 2940734 tcctcgccggccaccgtggcggc 2940756
>dbj|BS000554.1| Pan troglodytes chromosome Y clone:PTB-334B21, complete sequences Length = 129327 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 30 ccaccccgtcctcctccaccctc 52 ||||||| ||||||||||||||| Sbjct: 58512 ccaccccttcctcctccaccctc 58490
>dbj|AB232784.1| Lolium perenne LpSPS gene for sucrose phosphate synthase, complete cds Length = 3231 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 96 cgccggccaccgcggcggccgag 118 |||||||| |||||||||||||| Sbjct: 94 cgccggcccccgcggcggccgag 72
>emb|CR392037.10| Zebrafish DNA sequence from clone CH211-244O22 in linkage group 5, complete sequence Length = 140415 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 31 caccccgtcctcctccacc 49 ||||||||||||||||||| Sbjct: 17827 caccccgtcctcctccacc 17845
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 97 gccggccaccgcggcggcc 115 ||||||||||||||||||| Sbjct: 2404105 gccggccaccgcggcggcc 2404087 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 95 tcgccggccaccgcggcgg 113 ||||||||||||||||||| Sbjct: 1443781 tcgccggccaccgcggcgg 1443763
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 30 ccaccccgtcctcctccaccctc 52 ||||||| ||||||||||||||| Sbjct: 16420447 ccaccccttcctcctccaccctc 16420469
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 69 cgggcggcatccgcctcaa 87 ||||||||||||||||||| Sbjct: 2537595 cgggcggcatccgcctcaa 2537613
>gb|AE009906.1|AE009906 Pyrobaculum aerophilum strain IM2 section 161 of 201 of the complete genome Length = 10213 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 83 ctcaactcctcctcgccggccac 105 ||||||||||||||||| ||||| Sbjct: 7709 ctcaactcctcctcgcctgccac 7731
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 18 acggcatggccgccacccc 36 ||||||||||||||||||| Sbjct: 3860460 acggcatggccgccacccc 3860442
>emb|CR386477.1| Gallus gallus finished cDNA, clone ChEST677j3 Length = 956 Score = 38.2 bits (19), Expect = 8.3 Identities = 25/27 (92%) Strand = Plus / Minus Query: 88 ctcctcctcgccggccaccgcggcggc 114 |||||||||||||||| |||| ||||| Sbjct: 52 ctcctcctcgccggccgccgccgcggc 26
>gb|AC135559.4| Oryza sativa chromosome 3 BAC OSJNBa0030J19 genomic sequence, complete sequence Length = 133843 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 90 cctcctcgccggccaccgc 108 ||||||||||||||||||| Sbjct: 87193 cctcctcgccggccaccgc 87211
>gb|AY082962.1| Hordeum vulgare clone HVSMEb0009D03f CONSTANS-like protein CO6 (CO6) mRNA, complete cds Length = 1324 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 93 cctcgccggccaccgcggcggcc 115 ||||| ||||||||||||||||| Sbjct: 362 cctcggcggccaccgcggcggcc 340
>gb|AY082961.1| Hordeum vulgare clone HVSMEc0008O24f CONSTANS-like protein CO6 (CO6) mRNA, complete cds Length = 1455 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 93 cctcgccggccaccgcggcggcc 115 ||||| ||||||||||||||||| Sbjct: 409 cctcggcggccaccgcggcggcc 387
>gb|AY082960.1| Hordeum vulgare CONSTANS-like protein CO6 (CO6) gene, partial cds Length = 1163 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 93 cctcgccggccaccgcggcggcc 115 ||||| ||||||||||||||||| Sbjct: 279 cctcggcggccaccgcggcggcc 257
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 96 cgccggccaccgcggcggc 114 ||||||||||||||||||| Sbjct: 19698719 cgccggccaccgcggcggc 19698701
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 38.2 bits (19), Expect = 8.3 Identities = 28/31 (90%) Strand = Plus / Minus Query: 80 cgcctcaactcctcctcgccggccaccgcgg 110 ||||||| |||| ||||||||||||||||| Sbjct: 28050328 cgcctcatctcccgctcgccggccaccgcgg 28050298
>gb|AC104792.5| Homo sapiens BAC clone RP11-202B22 from 2, complete sequence Length = 53135 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 98 ccggccaccgcggcggccg 116 ||||||||||||||||||| Sbjct: 39259 ccggccaccgcggcggccg 39241
>gb|AC007244.2|AC007244 Homo sapiens BAC clone RP11-207L19 from Y, complete sequence Length = 184977 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 30 ccaccccgtcctcctccaccctc 52 ||||||| ||||||||||||||| Sbjct: 60756 ccaccccttcctcctccaccctc 60734
>gb|AF210249.1|AF210249 Streptomyces verticillus bleomycin biosynthetic gene cluster, complete cds Length = 77457 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 98 ccggccaccgcggcggccg 116 ||||||||||||||||||| Sbjct: 21105 ccggccaccgcggcggccg 21123
>dbj|AP005524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0562A06 Length = 154198 Score = 38.2 bits (19), Expect = 8.3 Identities = 28/31 (90%) Strand = Plus / Minus Query: 80 cgcctcaactcctcctcgccggccaccgcgg 110 ||||||| |||| ||||||||||||||||| Sbjct: 127820 cgcctcatctcccgctcgccggccaccgcgg 127790
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 31 caccccgtcctcctccacc 49 ||||||||||||||||||| Sbjct: 1002931 caccccgtcctcctccacc 1002913
>dbj|AP005859.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1053A04 Length = 144321 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 90 cctcctcgccggccaccgcggcg 112 |||||||| |||||||||||||| Sbjct: 35763 cctcctcgtcggccaccgcggcg 35785
>dbj|AP004786.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0017H11 Length = 158374 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 90 cctcctcgccggccaccgcggcg 112 |||||||| |||||||||||||| Sbjct: 140591 cctcctcgtcggccaccgcggcg 140613
>dbj|AP001389.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0541H01 Length = 157519 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 93 cctcgccggccaccgcggc 111 ||||||||||||||||||| Sbjct: 103581 cctcgccggccaccgcggc 103599
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 101 gccaccgcggcggccgagg 119 ||||||||||||||||||| Sbjct: 214035 gccaccgcggcggccgagg 214017
>dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548D03 Length = 156709 Score = 38.2 bits (19), Expect = 8.3 Identities = 25/27 (92%) Strand = Plus / Plus Query: 88 ctcctcctcgccggccaccgcggcggc 114 ||||||||||||||| || |||||||| Sbjct: 117866 ctcctcctcgccggcgacggcggcggc 117892
>dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0041F13 Length = 163230 Score = 38.2 bits (19), Expect = 8.3 Identities = 25/27 (92%) Strand = Plus / Plus Query: 88 ctcctcctcgccggccaccgcggcggc 114 ||||||||||||||| || |||||||| Sbjct: 9948 ctcctcctcgccggcgacggcggcggc 9974
>dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0019F11 Length = 123673 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 93 cctcgccggccaccgcggc 111 ||||||||||||||||||| Sbjct: 1342 cctcgccggccaccgcggc 1360
>dbj|AP003214.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0083M16 Length = 179428 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 96 cgccggccaccgcggcggc 114 ||||||||||||||||||| Sbjct: 43037 cgccggccaccgcggcggc 43055
>emb|AL713953.3|CNS07YPY Oryza sativa chromosome 12, . BAC OJ1134_A05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 120825 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 28 cgccaccccgtcctcctcc 46 ||||||||||||||||||| Sbjct: 50844 cgccaccccgtcctcctcc 50826
>dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0604E01 Length = 159049 Score = 38.2 bits (19), Expect = 8.3 Identities = 28/31 (90%) Strand = Plus / Minus Query: 80 cgcctcaactcctcctcgccggccaccgcgg 110 ||||||| |||| ||||||||||||||||| Sbjct: 47823 cgcctcatctcccgctcgccggccaccgcgg 47793
>dbj|AK119673.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-G08, full insert sequence Length = 812 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 96 cgccggccaccgcggcggc 114 ||||||||||||||||||| Sbjct: 74 cgccggccaccgcggcggc 92
>dbj|AK109053.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-E07, full insert sequence Length = 1200 Score = 38.2 bits (19), Expect = 8.3 Identities = 25/27 (92%) Strand = Plus / Plus Query: 88 ctcctcctcgccggccaccgcggcggc 114 ||||||||||||||| || |||||||| Sbjct: 66 ctcctcctcgccggcgacggcggcggc 92
>emb|AL157871.5|CNS01RG9 Human chromosome 14 DNA sequence BAC R-638I2 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 180688 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 gcatggccgccaccccgtc 39 ||||||||||||||||||| Sbjct: 152464 gcatggccgccaccccgtc 152482
>emb|AL135838.6|CNS01DVI Human chromosome 14 DNA sequence BAC R-362L22 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 187710 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 21 gcatggccgccaccccgtc 39 ||||||||||||||||||| Sbjct: 109436 gcatggccgccaccccgtc 109418
>gb|AC159134.3| Pan troglodytes BAC clone CH251-80P13 from chromosome unknown, complete sequence Length = 182033 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 gcatggccgccaccccgtc 39 ||||||||||||||||||| Sbjct: 23390 gcatggccgccaccccgtc 23408
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 38.2 bits (19), Expect = 8.3 Identities = 25/27 (92%) Strand = Plus / Plus Query: 5 cggctcatctccgacggcatggccgcc 31 ||||| ||||||||| ||||||||||| Sbjct: 4839898 cggctgatctccgacagcatggccgcc 4839924
>emb|AJ871581.1| Streptomyces achromogenes subsp. rubradiris complete rubradirin gene cluster, strain NRRL 3061 Length = 105657 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 cggccaccgcggcggccga 117 ||||||||||||||||||| Sbjct: 61315 cggccaccgcggcggccga 61297
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 ccgccaccccgtcctcctc 45 ||||||||||||||||||| Sbjct: 237487 ccgccaccccgtcctcctc 237505
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 caccgcggcggccgaggag 121 ||||||||||||||||||| Sbjct: 2623201 caccgcggcggccgaggag 2623219 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 103 caccgcggcggccgaggag 121 ||||||||||||||||||| Sbjct: 315496 caccgcggcggccgaggag 315514
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 96 cgccggccaccgcggcggc 114 ||||||||||||||||||| Sbjct: 19984576 cgccggccaccgcggcggc 19984558
>emb|BX536967.2|CNS09SBH Oryza sativa chromosome 12, . BAC OSJNBa0029N15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141053 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 28 cgccaccccgtcctcctcc 46 ||||||||||||||||||| Sbjct: 72381 cgccaccccgtcctcctcc 72363
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 31 caccccgtcctcctccacc 49 ||||||||||||||||||| Sbjct: 675923 caccccgtcctcctccacc 675905
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Minus Query: 98 ccggccaccgcggcggccg 116 ||||||||||||||||||| Sbjct: 1017885 ccggccaccgcggcggccg 1017867
>gb|AD000019.1|MSGY223 Mycobacterium tuberculosis sequence from clone y223 Length = 42061 Score = 38.2 bits (19), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 95 tcgccggccaccgcggcggccga 117 |||||||||| |||||||||||| Sbjct: 5558 tcgccggccagcgcggcggccga 5536
>emb|AL356801.5|CNS05TDJ Human chromosome 14 DNA sequence BAC R-454L9 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 158608 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 21 gcatggccgccaccccgtc 39 ||||||||||||||||||| Sbjct: 56624 gcatggccgccaccccgtc 56642
>gb|M61151.1|ATUAUX Agrobacterium rhizogenes trytophan oxygenase (aux1) and hydrolase (aux2) genes, complete cds Length = 5995 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 97 gccggccaccgcggcggcc 115 ||||||||||||||||||| Sbjct: 2360 gccggccaccgcggcggcc 2378
>gb|L24366.1|MSGDAPB Mycobacterium bovis meso-diaminopimelate biosynthetic pathway (dapB) gene, complete cds Length = 1791 Score = 38.2 bits (19), Expect = 8.3 Identities = 19/19 (100%) Strand = Plus / Plus Query: 97 gccggccaccgcggcggcc 115 ||||||||||||||||||| Sbjct: 1582 gccggccaccgcggcggcc 1600 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,291,386 Number of Sequences: 3902068 Number of extensions: 1291386 Number of successful extensions: 125374 Number of sequences better than 10.0: 141 Number of HSP's better than 10.0 without gapping: 150 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 117588 Number of HSP's gapped (non-prelim): 7786 length of query: 171 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 149 effective length of database: 17,147,199,772 effective search space: 2554932766028 effective search space used: 2554932766028 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
