ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart58h01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
2dbj|AP003524.3| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
3dbj|AK109790.1| Oryza sativa (japonica cultivar-group) cDNA clon... 121 2e-24
4dbj|AK067625.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 4e-22
5dbj|AK060501.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 4e-22
6dbj|AK066533.1| Oryza sativa (japonica cultivar-group) cDNA clon... 100 7e-18
7gb|AY196196.1| Brassica napus putative 3-ketoacyl-CoA reductase ... 54 4e-04
8gb|AF302098.1| Zea mays beta-ketoacyl reductase (gl8) gene, gl8-... 48 0.022
9gb|U89509.2|ZMU89509 Zea mays b-keto acyl reductase (glossy8) mR... 48 0.022
10gb|AF348370.1| Zea mays inbred Q66 beta-keto acyl reductase gene... 48 0.022
11gb|AF348369.1| Zea mays inbred Q67 beta-keto acyl reductase gene... 48 0.022
12gb|AF348368.1| Zea mays inbred B79 beta-keto acyl reductase gene... 48 0.022
13gb|AF348367.1| Zea mays inbred B77 beta-keto acyl reductase gene... 48 0.022
14gb|AF527771.1| Zea mays cultivar B73 beta-ketoacyl reductase GL8... 48 0.022
15gb|AY196197.1| Brassica napus putative 3-ketoacyl-CoA reductase ... 46 0.086
16gb|U89510.1|HVU89510 Hordeum vulgare b-keto acyl reductase (glos... 46 0.086
17ref|XM_471042.1| Oryza sativa (japonica cultivar-group), predic... 42 1.3
18emb|AL606631.2|OSJN00069 Oryza sativa genomic DNA, chromosome 4,... 42 1.3
19gb|AC104299.2| Homo sapiens chromosome 3 clone RP11-129K20, comp... 42 1.3
20gb|AC108521.1| Caenorhabditis briggsae cosmid CB004G08, complete... 42 1.3
21dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
22dbj|AK064965.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
23gb|AC107085.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
24gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 5.3
25gb|AY186939.1| Trichlorobacter thiogenes strain K1 RNA polymeras... 40 5.3
26gb|AY186922.1| Geobacter bremensis strain Dfr1 rpoB pseudogene, ... 40 5.3
27gb|AY186933.1| Pelobacter masseliensis strain HHQ7 RNA polymeras... 40 5.3
28ref|XM_746475.1| Aspergillus fumigatus Af293 COP9 signalosome su... 40 5.3
29emb|CR382335.12| Zebrafish DNA sequence from clone DKEY-56I16 in... 40 5.3
30ref|XM_750975.1| Aspergillus fumigatus Af293 serine peptidase, f... 40 5.3
31ref|XM_546833.2| PREDICTED: Canis familiaris similar to homolog ... 40 5.3
32emb|AL357506.10| Human DNA sequence from clone RP11-327K21 on ch... 40 5.3
33emb|AL049489.1|SPBC1778 S.pombe chromosome II cosmid c1778 40 5.3
34gb|AY547326.1| Geobacter pelophilus strain Dfr2 RNA polymerase b... 40 5.3
35gb|AC146706.8| Medicago truncatula clone mth2-108g5, complete se... 40 5.3
36gb|AY034032.1| Schizosaccharomyces pombe Rap1 (rap1) mRNA, compl... 40 5.3
37ref|NM_001022207.1| Schizosaccharomyces pombe 972h- hypothetical... 40 5.3
38gb|AY224189.1| Medicago truncatula adenosylhomocysteinase (AHC2)... 40 5.3
39dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
40dbj|BA000013.4| Mesorhizobium loti MAFF303099 pMLa DNA, cpmplete... 40 5.3
41emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 5.3
42emb|CR853287.6| Zebrafish DNA sequence from clone DKEYP-115G4 in... 40 5.3
43emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chro... 40 5.3
44dbj|AB061738.1| Schizosaccharomyces pombe rap1 gene for Rap1, co... 40 5.3 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  121 bits (61), Expect = 2e-24
 Identities = 111/128 (86%)
 Strand = Plus / Minus

                                                                            
Query: 186      ccgccgccgctacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtc 245
                ||||||||||||||| || ||||||||| | || || |||||||| |||||||| |  ||
Sbjct: 11017430 ccgccgccgctacggcgcctgggccgtcatcacggggccaacgtccggcatcgggcgctc 11017371

                                                                            
Query: 246      catggccctggagctcgcgcgcttgggcctcaacctcgtcctcgtcggccgcgaccccgc 305
                | |||| ||||||||||| |||  ||||||||||||||||||||||||||||||||| ||
Sbjct: 11017370 cgtggcgctggagctcgcccgccggggcctcaacctcgtcctcgtcggccgcgacccggc 11017311

                        
Query: 306      cnagctcc 313
                | ||||||
Sbjct: 11017310 caagctcc 11017303



 Score =  113 bits (57), Expect = 4e-22
 Identities = 102/117 (87%)
 Strand = Plus / Minus

                                                                            
Query: 186      ccgccgccgctacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtc 245
                ||||||||| ||||| | |||||||||||| ||||| |||||||| ||||||||||   |
Sbjct: 10977107 ccgccgccggtacggcgaatgggccgtcgtcaccgggccaacgtccggcatcggccgtgc 10977048

                                                                         
Query: 246      catggccctggagctcgcgcgcttgggcctcaacctcgtcctcgtcggccgcgaccc 302
                |||||| |||||||||||||||   |||||||||||||| ||||||||||| |||||
Sbjct: 10977047 catggcgctggagctcgcgcgccacggcctcaacctcgtgctcgtcggccgtgaccc 10976991



 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 115/137 (83%)
 Strand = Plus / Minus

                                                                            
Query: 189      ccgccgctacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtccat 248
                |||||| ||||| || ||||||||| | ||||| || ||||| |||||||||    ||||
Sbjct: 10960825 ccgccggtacggcgcgtgggccgtcatcaccgggccgacgtccggcatcggctgcgccat 10960766

                                                                            
Query: 249      ggccctggagctcgcgcgcttgggcctcaacctcgtcctcgtcggccgcgaccccgccna 308
                ||| |||||||||||||||   |||||||||||||| ||||||||||| |||||||||  
Sbjct: 10960765 ggcgctggagctcgcgcgccgcggcctcaacctcgtgctcgtcggccgtgaccccgccag 10960706

                                 
Query: 309      gctccaggatatctccg 325
                ||||| ||| |||||||
Sbjct: 10960705 gctccgggagatctccg 10960689



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 108/128 (84%)
 Strand = Plus / Minus

                                                                            
Query: 186      ccgccgccgctacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtc 245
                ||||||||| |||||  | ||||||||||| ||||| || ||||| ||||||||||   |
Sbjct: 11023993 ccgccgccggtacggctcgtgggccgtcgtcaccgggccgacgtcaggcatcggccgtgc 11023934

                                                                            
Query: 246      catggccctggagctcgcgcgcttgggcctcaacctcgtcctcgtcggccgcgaccccgc 305
                |||||| |||||||||||| |    ||||||||| |||||||||||||||| ||||||||
Sbjct: 11023933 catggcgctggagctcgcggggcgcggcctcaacgtcgtcctcgtcggccgtgaccccgc 11023874

                        
Query: 306      cnagctcc 313
                | ||||||
Sbjct: 11023873 caagctcc 11023866



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 98/117 (83%)
 Strand = Plus / Minus

                                                                            
Query: 186      ccgccgccgctacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtc 245
                ||||||||| ||||| |  ||||||||||| ||||| |||||||| || |||||||   |
Sbjct: 10966265 ccgccgccggtacggcgagtgggccgtcgtcaccgggccaacgtccggtatcggccgtgc 10966206

                                                                         
Query: 246      catggccctggagctcgcgcgcttgggcctcaacctcgtcctcgtcggccgcgaccc 302
                |||||| ||||||||||||||    |||||||| ||||| ||||||||||| |||||
Sbjct: 10966205 catggcgctggagctcgcgcgtcacggcctcaatctcgtgctcgtcggccgtgaccc 10966149



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                      
Query: 271      ggcctcaacctcgtcctcgtcggccgcgaccccgccnagctccaggatatctcc 324
                |||||||||||||| ||||||||||| ||||||||| | ||| |||| ||||||
Sbjct: 10947700 ggcctcaacctcgtgctcgtcggccgtgaccccgccaacctcgaggagatctcc 10947647
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>dbj|AP003524.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0501G08
          Length = 173505

 Score =  121 bits (61), Expect = 2e-24
 Identities = 111/128 (86%)
 Strand = Plus / Minus

                                                                          
Query: 186    ccgccgccgctacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtc 245
              ||||||||||||||| || ||||||||| | || || |||||||| |||||||| |  ||
Sbjct: 101512 ccgccgccgctacggcgcctgggccgtcatcacggggccaacgtccggcatcgggcgctc 101453

                                                                          
Query: 246    catggccctggagctcgcgcgcttgggcctcaacctcgtcctcgtcggccgcgaccccgc 305
              | |||| ||||||||||| |||  ||||||||||||||||||||||||||||||||| ||
Sbjct: 101452 cgtggcgctggagctcgcccgccggggcctcaacctcgtcctcgtcggccgcgacccggc 101393

                      
Query: 306    cnagctcc 313
              | ||||||
Sbjct: 101392 caagctcc 101385



 Score =  113 bits (57), Expect = 4e-22
 Identities = 102/117 (87%)
 Strand = Plus / Minus

                                                                         
Query: 186   ccgccgccgctacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtc 245
             ||||||||| ||||| | |||||||||||| ||||| |||||||| ||||||||||   |
Sbjct: 61189 ccgccgccggtacggcgaatgggccgtcgtcaccgggccaacgtccggcatcggccgtgc 61130

                                                                      
Query: 246   catggccctggagctcgcgcgcttgggcctcaacctcgtcctcgtcggccgcgaccc 302
             |||||| |||||||||||||||   |||||||||||||| ||||||||||| |||||
Sbjct: 61129 catggcgctggagctcgcgcgccacggcctcaacctcgtgctcgtcggccgtgaccc 61073



 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 115/137 (83%)
 Strand = Plus / Minus

                                                                         
Query: 189   ccgccgctacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtccat 248
             |||||| ||||| || ||||||||| | ||||| || ||||| |||||||||    ||||
Sbjct: 44907 ccgccggtacggcgcgtgggccgtcatcaccgggccgacgtccggcatcggctgcgccat 44848

                                                                         
Query: 249   ggccctggagctcgcgcgcttgggcctcaacctcgtcctcgtcggccgcgaccccgccna 308
             ||| |||||||||||||||   |||||||||||||| ||||||||||| |||||||||  
Sbjct: 44847 ggcgctggagctcgcgcgccgcggcctcaacctcgtgctcgtcggccgtgaccccgccag 44788

                              
Query: 309   gctccaggatatctccg 325
             ||||| ||| |||||||
Sbjct: 44787 gctccgggagatctccg 44771



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 108/128 (84%)
 Strand = Plus / Minus

                                                                          
Query: 186    ccgccgccgctacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtc 245
              ||||||||| |||||  | ||||||||||| ||||| || ||||| ||||||||||   |
Sbjct: 108075 ccgccgccggtacggctcgtgggccgtcgtcaccgggccgacgtcaggcatcggccgtgc 108016

                                                                          
Query: 246    catggccctggagctcgcgcgcttgggcctcaacctcgtcctcgtcggccgcgaccccgc 305
              |||||| |||||||||||| |    ||||||||| |||||||||||||||| ||||||||
Sbjct: 108015 catggcgctggagctcgcggggcgcggcctcaacgtcgtcctcgtcggccgtgaccccgc 107956

                      
Query: 306    cnagctcc 313
              | ||||||
Sbjct: 107955 caagctcc 107948



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 98/117 (83%)
 Strand = Plus / Minus

                                                                         
Query: 186   ccgccgccgctacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtc 245
             ||||||||| ||||| |  ||||||||||| ||||| |||||||| || |||||||   |
Sbjct: 50347 ccgccgccggtacggcgagtgggccgtcgtcaccgggccaacgtccggtatcggccgtgc 50288

                                                                      
Query: 246   catggccctggagctcgcgcgcttgggcctcaacctcgtcctcgtcggccgcgaccc 302
             |||||| ||||||||||||||    |||||||| ||||| ||||||||||| |||||
Sbjct: 50287 catggcgctggagctcgcgcgtcacggcctcaatctcgtgctcgtcggccgtgaccc 50231



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                   
Query: 271   ggcctcaacctcgtcctcgtcggccgcgaccccgccnagctccaggatatctcc 324
             |||||||||||||| ||||||||||| ||||||||| | ||| |||| ||||||
Sbjct: 31782 ggcctcaacctcgtgctcgtcggccgtgaccccgccaacctcgaggagatctcc 31729
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>dbj|AK109790.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-D07, full
           insert sequence
          Length = 1393

 Score =  121 bits (61), Expect = 2e-24
 Identities = 111/128 (86%)
 Strand = Plus / Plus

                                                                       
Query: 186 ccgccgccgctacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtc 245
           ||||||||||||||| || ||||||||| | || || |||||||| |||||||| |  ||
Sbjct: 215 ccgccgccgctacggcgcctgggccgtcatcacggggccaacgtccggcatcgggcgctc 274

                                                                       
Query: 246 catggccctggagctcgcgcgcttgggcctcaacctcgtcctcgtcggccgcgaccccgc 305
           | |||| ||||||||||| |||  ||||||||||||||||||||||||||||||||| ||
Sbjct: 275 cgtggcgctggagctcgcccgccggggcctcaacctcgtcctcgtcggccgcgacccggc 334

                   
Query: 306 cnagctcc 313
           | ||||||
Sbjct: 335 caagctcc 342
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>dbj|AK067625.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013113L03, full
           insert sequence
          Length = 1209

 Score =  113 bits (57), Expect = 4e-22
 Identities = 102/117 (87%)
 Strand = Plus / Plus

                                                                       
Query: 186 ccgccgccgctacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtc 245
           ||||||||| ||||| | |||||||||||| ||||| |||||||| ||||||||||   |
Sbjct: 302 ccgccgccggtacggcgaatgggccgtcgtcaccgggccaacgtccggcatcggccgtgc 361

                                                                    
Query: 246 catggccctggagctcgcgcgcttgggcctcaacctcgtcctcgtcggccgcgaccc 302
           |||||| |||||||||||||||   |||||||||||||| ||||||||||| |||||
Sbjct: 362 catggcgctggagctcgcgcgccacggcctcaacctcgtgctcgtcggccgtgaccc 418
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>dbj|AK060501.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-G10, full
           insert sequence
          Length = 1210

 Score =  113 bits (57), Expect = 4e-22
 Identities = 102/117 (87%)
 Strand = Plus / Plus

                                                                       
Query: 186 ccgccgccgctacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtc 245
           ||||||||| ||||| | |||||||||||| ||||| |||||||| ||||||||||   |
Sbjct: 301 ccgccgccggtacggcgaatgggccgtcgtcaccgggccaacgtccggcatcggccgtgc 360

                                                                    
Query: 246 catggccctggagctcgcgcgcttgggcctcaacctcgtcctcgtcggccgcgaccc 302
           |||||| |||||||||||||||   |||||||||||||| ||||||||||| |||||
Sbjct: 361 catggcgctggagctcgcgcgccacggcctcaacctcgtgctcgtcggccgtgaccc 417
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>dbj|AK066533.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073H04, full
           insert sequence
          Length = 1345

 Score = 99.6 bits (50), Expect = 7e-18
 Identities = 115/137 (83%)
 Strand = Plus / Plus

                                                                       
Query: 189 ccgccgctacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtccat 248
           |||||| ||||| || ||||||||| | ||||| || ||||| |||||||||    ||||
Sbjct: 210 ccgccggtacggcgcgtgggccgtcatcaccgggccgacgtccggcatcggctgcgccat 269

                                                                       
Query: 249 ggccctggagctcgcgcgcttgggcctcaacctcgtcctcgtcggccgcgaccccgccna 308
           ||| |||||||||||||||   |||||||||||||| ||||||||||| |||||||||  
Sbjct: 270 ggcgctggagctcgcgcgccgcggcctcaacctcgtgctcgtcggccgtgaccccgccag 329

                            
Query: 309 gctccaggatatctccg 325
           ||||| ||| |||||||
Sbjct: 330 gctccgggagatctccg 346
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>gb|AY196196.1| Brassica napus putative 3-ketoacyl-CoA reductase 1 mRNA, complete
           cds
          Length = 960

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 271 ggcctcaacctcgtcctcgtcggccgcgaccccgccnagctc 312
           |||||||||||||||||||||| |||| |||||| | |||||
Sbjct: 223 ggcctcaacctcgtcctcgtcgcccgcaaccccgacaagctc 264
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>gb|AF302098.1| Zea mays beta-ketoacyl reductase (gl8) gene, gl8-B73 allele, complete
            cds
          Length = 6817

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                            
Query: 187  cgccgccgctacggggcatgggccgtcgtgac 218
            |||||||||||||| || ||||||||||||||
Sbjct: 3155 cgccgccgctacggcgcctgggccgtcgtgac 3186
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>gb|U89509.2|ZMU89509 Zea mays b-keto acyl reductase (glossy8) mRNA, complete cds
          Length = 1374

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 187 cgccgccgctacggggcatgggccgtcgtgac 218
           |||||||||||||| || ||||||||||||||
Sbjct: 282 cgccgccgctacggcgcctgggccgtcgtgac 313
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>gb|AF348370.1| Zea mays inbred Q66 beta-keto acyl reductase gene, partial cds
          Length = 721

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 187 cgccgccgctacggggcatgggccgtcgtgac 218
           |||||||||||||| || ||||||||||||||
Sbjct: 562 cgccgccgctacggcgcctgggccgtcgtgac 593
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>gb|AF348369.1| Zea mays inbred Q67 beta-keto acyl reductase gene, partial cds
          Length = 945

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 187 cgccgccgctacggggcatgggccgtcgtgac 218
           |||||||||||||| || ||||||||||||||
Sbjct: 786 cgccgccgctacggcgcctgggccgtcgtgac 817
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>gb|AF348368.1| Zea mays inbred B79 beta-keto acyl reductase gene, partial cds
          Length = 977

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 187 cgccgccgctacggggcatgggccgtcgtgac 218
           |||||||||||||| || ||||||||||||||
Sbjct: 818 cgccgccgctacggcgcctgggccgtcgtgac 849
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>gb|AF348367.1| Zea mays inbred B77 beta-keto acyl reductase gene, partial cds
          Length = 1257

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                            
Query: 187  cgccgccgctacggggcatgggccgtcgtgac 218
            |||||||||||||| || ||||||||||||||
Sbjct: 1099 cgccgccgctacggcgcctgggccgtcgtgac 1130
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>gb|AF527771.1| Zea mays cultivar B73 beta-ketoacyl reductase GL8B (gl8b) gene,
            complete cds
          Length = 7724

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                            
Query: 187  cgccgccgctacggggcatgggccgtcgtgac 218
            |||||||||||||| || ||||||||||||||
Sbjct: 3748 cgccgccgctacggcgcctgggccgtcgtgac 3779
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>gb|AY196197.1| Brassica napus putative 3-ketoacyl-CoA reductase 2 mRNA, complete
           cds
          Length = 960

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 271 ggcctcaacctcgtcctcgtcggccgcgaccccgccnagctc 312
           |||||| ||||||||||||||| |||| |||||| | |||||
Sbjct: 223 ggcctccacctcgtcctcgtcgcccgcaaccccgacaagctc 264
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>gb|U89510.1|HVU89510 Hordeum vulgare b-keto acyl reductase (glossy8) mRNA, complete cds
          Length = 1138

 Score = 46.1 bits (23), Expect = 0.086
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 187 cgccgccgctacggggcatgggccgtcgtgaccgg 221
           ||||||||||||||| | ||||||||||| |||||
Sbjct: 212 cgccgccgctacgggccctgggccgtcgtcaccgg 246
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>ref|XM_471042.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 960

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 120/153 (78%)
 Strand = Plus / Plus

                                                                       
Query: 136 ctccgcctcctctcacacctcaccctcctcctgcgtcggccgaggaacccccgccgccgc 195
           |||||||||||| |  ||||| |||||  ||| || ||||| | | ||| ||||||| ||
Sbjct: 76  ctccgcctcctcccttacctcgccctctacctccgccggcccaaggacctccgccgctgc 135

                                                                       
Query: 196 tacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtccatggccctg 255
           ||||| |  |||||||| || ||||| || ||| | ||  |||| |  ||||||||| ||
Sbjct: 136 tacggcgagtgggccgtggtcaccggcccgacgacggggctcgggcgatccatggccatg 195

                                            
Query: 256 gagctcgcgcgcttgggcctcaacctcgtcctc 288
           |||||||| |||   ||| ||||||||||||||
Sbjct: 196 gagctcgcccgccgcggcttcaacctcgtcctc 228
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>emb|AL606631.2|OSJN00069 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0050O03,
             complete sequence
          Length = 140948

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 120/153 (78%)
 Strand = Plus / Plus

                                                                         
Query: 136   ctccgcctcctctcacacctcaccctcctcctgcgtcggccgaggaacccccgccgccgc 195
             |||||||||||| |  ||||| |||||  ||| || ||||| | | ||| ||||||| ||
Sbjct: 51487 ctccgcctcctcccttacctcgccctctacctccgccggcccaaggacctccgccgctgc 51546

                                                                         
Query: 196   tacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtccatggccctg 255
             ||||| |  |||||||| || ||||| || ||| | ||  |||| |  ||||||||| ||
Sbjct: 51547 tacggcgagtgggccgtggtcaccggcccgacgacggggctcgggcgatccatggccatg 51606

                                              
Query: 256   gagctcgcgcgcttgggcctcaacctcgtcctc 288
             |||||||| |||   ||| ||||||||||||||
Sbjct: 51607 gagctcgcccgccgcggcttcaacctcgtcctc 51639
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>gb|AC104299.2| Homo sapiens chromosome 3 clone RP11-129K20, complete sequence
          Length = 181444

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 140   gcctcctctcacacctcaccctcct 164
             |||||||||||||||||| ||||||
Sbjct: 97606 gcctcctctcacacctcagcctcct 97630
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>gb|AC108521.1| Caenorhabditis briggsae cosmid CB004G08, complete sequence
          Length = 82505

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 32    tggagaaagtggaagagaaca 52
             |||||||||||||||||||||
Sbjct: 36384 tggagaaagtggaagagaaca 36404
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 120/153 (78%)
 Strand = Plus / Plus

                                                                          
Query: 136    ctccgcctcctctcacacctcaccctcctcctgcgtcggccgaggaacccccgccgccgc 195
              |||||||||||| |  ||||| |||||  ||| || ||||| | | ||| ||||||| ||
Sbjct: 971768 ctccgcctcctcccttacctcgccctctacctccgccggcccaaggacctccgccgctgc 971827

                                                                          
Query: 196    tacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtccatggccctg 255
              ||||| |  |||||||| || ||||| || ||| | ||  |||| |  ||||||||| ||
Sbjct: 971828 tacggcgagtgggccgtggtcaccggcccgacgacggggctcgggcgatccatggccatg 971887

                                               
Query: 256    gagctcgcgcgcttgggcctcaacctcgtcctc 288
              |||||||| |||   ||| ||||||||||||||
Sbjct: 971888 gagctcgcccgccgcggcttcaacctcgtcctc 971920
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>dbj|AK064965.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001B01, full
           insert sequence
          Length = 1810

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 120/153 (78%)
 Strand = Plus / Plus

                                                                       
Query: 136 ctccgcctcctctcacacctcaccctcctcctgcgtcggccgaggaacccccgccgccgc 195
           |||||||||||| |  ||||| |||||  ||| || ||||| | | ||| ||||||| ||
Sbjct: 129 ctccgcctcctcccttacctcgccctctacctccgccggcccaaggacctccgccgctgc 188

                                                                       
Query: 196 tacggggcatgggccgtcgtgaccggtccaacgtctggcatcggccagtccatggccctg 255
           ||||| |  |||||||| || ||||| || ||| | ||  |||| |  ||||||||| ||
Sbjct: 189 tacggcgagtgggccgtggtcaccggcccgacgacggggctcgggcgatccatggccatg 248

                                            
Query: 256 gagctcgcgcgcttgggcctcaacctcgtcctc 288
           |||||||| |||   ||| ||||||||||||||
Sbjct: 249 gagctcgcccgccgcggcttcaacctcgtcctc 281
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>gb|AC107085.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1764_D01,
             complete sequence
          Length = 164709

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 279   cctcgtcctcgtcggccgcg 298
             ||||||||||||||||||||
Sbjct: 20619 cctcgtcctcgtcggccgcg 20600
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 95      ccctggccgtcctcggcgcg 114
               ||||||||||||||||||||
Sbjct: 2694601 ccctggccgtcctcggcgcg 2694620
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>gb|AY186939.1| Trichlorobacter thiogenes strain K1 RNA polymerase beta subunit
           (rpoB) gene, partial cds
          Length = 640

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 281 tcgtcctcgtcggccgcgac 300
           ||||||||||||||||||||
Sbjct: 497 tcgtcctcgtcggccgcgac 516
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>gb|AY186922.1| Geobacter bremensis strain Dfr1 rpoB pseudogene, partial sequence
          Length = 627

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 281 tcgtcctcgtcggccgcgac 300
           ||||||||||||||||||||
Sbjct: 498 tcgtcctcgtcggccgcgac 517
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>gb|AY186933.1| Pelobacter masseliensis strain HHQ7 RNA polymerase beta subunit
           (rpoB) gene, partial cds
          Length = 632

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 281 tcgtcctcgtcggccgcgac 300
           ||||||||||||||||||||
Sbjct: 497 tcgtcctcgtcggccgcgac 516
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>ref|XM_746475.1| Aspergillus fumigatus Af293 COP9 signalosome subunit 7 CsnG
           (Afu4g12630) partial mRNA
          Length = 966

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 135 gctccgcctcctctcacacctcaccctc 162
           ||||||||||||||| | ||||||||||
Sbjct: 303 gctccgcctcctctcgctcctcaccctc 330
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>emb|CR382335.12| Zebrafish DNA sequence from clone DKEY-56I16 in linkage group 14,
              complete sequence
          Length = 159057

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 153    cctcaccctcctcctgcgtc 172
              ||||||||||||||||||||
Sbjct: 134140 cctcaccctcctcctgcgtc 134159
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>ref|XM_750975.1| Aspergillus fumigatus Af293 serine peptidase, family S28
           (Afu2g17330) partial mRNA
          Length = 1719

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 309 gctccaggatatctccgagaccat 332
           ||||||||||| ||||||||||||
Sbjct: 406 gctccaggataactccgagaccat 383
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>ref|XM_546833.2| PREDICTED: Canis familiaris similar to homolog of yeast mRNA
           transport regulator 3 (LOC489713), mRNA
          Length = 851

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 279 cctcgtcctcgtcggccgcg 298
           ||||||||||||||||||||
Sbjct: 111 cctcgtcctcgtcggccgcg 92
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>emb|AL357506.10| Human DNA sequence from clone RP11-327K21 on chromosome 6, complete
              sequence
          Length = 159294

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 35     agaaagtggaagagaacatg 54
              ||||||||||||||||||||
Sbjct: 120529 agaaagtggaagagaacatg 120548
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>emb|AL049489.1|SPBC1778 S.pombe chromosome II cosmid c1778
          Length = 19011

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 35   agaaagtggaagagaacatg 54
            ||||||||||||||||||||
Sbjct: 4256 agaaagtggaagagaacatg 4275
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>gb|AY547326.1| Geobacter pelophilus strain Dfr2 RNA polymerase beta subunit (rpob)
           gene, partial cds
          Length = 519

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 281 tcgtcctcgtcggccgcgac 300
           ||||||||||||||||||||
Sbjct: 389 tcgtcctcgtcggccgcgac 408
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>gb|AC146706.8| Medicago truncatula clone mth2-108g5, complete sequence
          Length = 106753

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 142    ctcctctcacacctcaccctcctcctgc 169
              |||||| |||||| ||||||||||||||
Sbjct: 101948 ctcctcacacaccacaccctcctcctgc 101975
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>gb|AY034032.1| Schizosaccharomyces pombe Rap1 (rap1) mRNA, complete cds
          Length = 2275

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 35   agaaagtggaagagaacatg 54
            ||||||||||||||||||||
Sbjct: 1783 agaaagtggaagagaacatg 1802
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>ref|NM_001022207.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC1778.02),
            partial mRNA
          Length = 2082

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 35   agaaagtggaagagaacatg 54
            ||||||||||||||||||||
Sbjct: 1712 agaaagtggaagagaacatg 1731
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>gb|AY224189.1| Medicago truncatula adenosylhomocysteinase (AHC2) gene, complete cds
          Length = 68460

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 142   ctcctctcacacctcaccctcctcctgc 169
             |||||| |||||| ||||||||||||||
Sbjct: 63209 ctcctcacacaccacaccctcctcctgc 63182
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 279      cctcgtcctcgtcggccgcg 298
                ||||||||||||||||||||
Sbjct: 18853241 cctcgtcctcgtcggccgcg 18853222
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>dbj|BA000013.4| Mesorhizobium loti MAFF303099 pMLa DNA, cpmplete genome
          Length = 351911

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 364   gtcctcttcgacctcgccct 383
             ||||||||||||||||||||
Sbjct: 29612 gtcctcttcgacctcgccct 29593
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 369    cttcgacctcgccctcatcgccac 392
              |||||||| |||||||||||||||
Sbjct: 125250 cttcgaccacgccctcatcgccac 125227
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>emb|CR853287.6| Zebrafish DNA sequence from clone DKEYP-115G4 in linkage group 15,
             complete sequence
          Length = 169306

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   cctcaccctcctcctgcgtc 172
             ||||||||||||||||||||
Sbjct: 99410 cctcaccctcctcctgcgtc 99391
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>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2
          Length = 339972

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 135   gctccgcctcctctcacacc 154
             ||||||||||||||||||||
Sbjct: 47721 gctccgcctcctctcacacc 47702
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>dbj|AB061738.1| Schizosaccharomyces pombe rap1 gene for Rap1, complete cds
          Length = 2896

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 35   agaaagtggaagagaacatg 54
            ||||||||||||||||||||
Sbjct: 2526 agaaagtggaagagaacatg 2545


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,704,312
Number of Sequences: 3902068
Number of extensions: 2704312
Number of successful extensions: 56965
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56715
Number of HSP's gapped (non-prelim): 246
length of query: 396
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 374
effective length of database: 17,147,199,772
effective search space: 6413052714728
effective search space used: 6413052714728
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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