ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart58g04 |
|---|---|
| Clone Library Name | barley_pub |
>S35B2_DROME (Q9VEI3) Adenosine 3'-phospho 5'-phosphosulfate transporter 1 (PAPS| transporter 1) (Protein slalom) Length = 465 Score = 54.3 bits (129), Expect = 1e-07 Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 3/101 (2%) Frame = +1 Query: 142 LAFCVGGIWSSYITQGILQETLSTK---RFGPEERRFDHLAFLNFAQNVVCFVWSFIMIK 312 L +C GG+ SY+T G+LQE + T+ F E +F FL F+ ++ F+ + ++ Sbjct: 145 LLWCFGGLMISYLTWGVLQEKIMTQNYLNFTGESAKFKDSQFLVFSNRLLAFLVALAYLQ 204 Query: 313 LWSGGSSPAGRAPLLKYWGVSITNTIGPTMGIEALQYISYP 435 W S RAPL KY S +N + EAL+++++P Sbjct: 205 -WQ-PSPVRHRAPLYKYSYASFSNIMSAWFQYEALKFVNFP 243
>S35B2_PONPY (Q5R9A1) Adenosine 3'-phospho 5'-phosphosulfate transporter 1 (PAPS| transporter 1) (Solute carrier family 35 member B2) Length = 432 Score = 48.9 bits (115), Expect = 5e-06 Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 4/102 (3%) Frame = +1 Query: 142 LAFCVGGIWSSYITQGILQETLSTKRFGPEE----RRFDHLAFLNFAQNVVCFVWSFIMI 309 L FC G+ SY+T G+LQE + T+ +G RF FL V+ + + + Sbjct: 112 LLFCATGLQVSYLTWGVLQERVMTRSYGATATSPGERFTDSQFLVLMNRVLALIVAGLSC 171 Query: 310 KLWSGGSSPAGRAPLLKYWGVSITNTIGPTMGIEALQYISYP 435 L P AP+ +Y S++N + EAL+++S+P Sbjct: 172 VLC---KQPRHGAPMYRYSFASLSNVLSSWCQYEALKFVSFP 210
>S35B2_HUMAN (Q8TB61) Adenosine 3'-phospho 5'-phosphosulfate transporter 1 (PAPS| transporter 1) (Solute carrier family 35 member B2) (Putative MAPK-activating protein PM15) (Putative NF-kappa-B-activating protein 48) Length = 432 Score = 48.9 bits (115), Expect = 5e-06 Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 4/102 (3%) Frame = +1 Query: 142 LAFCVGGIWSSYITQGILQETLSTKRFGPEE----RRFDHLAFLNFAQNVVCFVWSFIMI 309 L FC G+ SY+T G+LQE + T+ +G RF FL V+ + + + Sbjct: 112 LLFCATGLQVSYLTWGVLQERVMTRSYGATATSPGERFTDSQFLVLMNRVLALIVAGLSC 171 Query: 310 KLWSGGSSPAGRAPLLKYWGVSITNTIGPTMGIEALQYISYP 435 L P AP+ +Y S++N + EAL+++S+P Sbjct: 172 VLC---KQPRHGAPMYRYSFASLSNVLSSWCQYEALKFVSFP 210
>S35B2_MOUSE (Q91ZN5) Adenosine 3'-phospho 5'-phosphosulfate transporter 1 (PAPS| transporter 1) (Solute carrier family 35 member B2) Length = 431 Score = 48.1 bits (113), Expect = 9e-06 Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 4/106 (3%) Frame = +1 Query: 130 RVAVLAFCVGGIWSSYITQGILQETLSTKRFGPEE----RRFDHLAFLNFAQNVVCFVWS 297 +V L FC G+ SY+T GILQE + T +G F FL V+ V + Sbjct: 108 QVLKLVFCASGLQVSYLTWGILQERVMTGSYGATATSPGEHFTDSQFLVLMNRVLALVVA 167 Query: 298 FIMIKLWSGGSSPAGRAPLLKYWGVSITNTIGPTMGIEALQYISYP 435 + L P AP+ +Y S++N + EAL+++S+P Sbjct: 168 GLYCVL---RKQPRHGAPMYRYSFASLSNVLSSWCQYEALKFVSFP 210
>S35B2_CAEEL (Q8MXJ9) Adenosine 3'-phospho 5'-phosphosulfate transporter 1 (PAPS| transporter 1) Length = 425 Score = 47.0 bits (110), Expect = 2e-05 Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 6/107 (5%) Frame = +1 Query: 133 VAVLAFCVGGIWSSYITQGILQETLSTKRFGPEER-----RFDHLAFLNFAQNVVCFVWS 297 + +L F GI + + G+LQE + T+ + ++ +F FL F +V V S Sbjct: 103 IILLLFFFSGIQVTLVAMGVLQERIITRGYRRSDQLEVEDKFGETQFLIFCNRIVALVLS 162 Query: 298 F-IMIKLWSGGSSPAGRAPLLKYWGVSITNTIGPTMGIEALQYISYP 435 I+ K W+ P PL + S +NTI EAL+Y+S+P Sbjct: 163 LMILAKDWT--KQPPHVPPLYVHSYTSFSNTISSWCQYEALKYVSFP 207
>HUT1_EMENI (Q5B5W2) UDP-galactose transporter homolog 1| Length = 424 Score = 45.1 bits (105), Expect = 8e-05 Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 19/116 (16%) Frame = +1 Query: 142 LAFCVGGIWSSYITQGILQETLSTKRF----------GPEERRFDHLAFLNFAQNVVCFV 291 LAFCV GI++S+++ G+LQE ++T + PE+ RF LN Q+ V Sbjct: 60 LAFCVAGIYASFLSWGVLQEAITTVSYPVHPPTAAEPEPEKERFTFSIVLNTIQSTFAAV 119 Query: 292 WSFIMIKLWSGGSSPAG---------RAPLLKYWGVSITNTIGPTMGIEALQYISY 432 F+ + S+P G R + VSI++++ G +L +I Y Sbjct: 120 TGFLYLYF----STPKGEKVPSIFPTRKIIFPLVLVSISSSLASPFGYASLAHIDY 171
>HUT1_ASHGO (Q755H7) UDP-galactose transporter homolog 1| Length = 324 Score = 44.7 bits (104), Expect = 1e-04 Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 4/101 (3%) Frame = +1 Query: 142 LAFCVGGIWSSYITQGILQETLSTKRFGPEERRFDHLAFLNFAQNVVCFVWSFIMIKLWS 321 L V GI+++++T + QE L+T + RF H +F+ Q + V +K Sbjct: 7 LVIAVCGIYATFLTWSLAQEPLTTSVWPNSAARFSHSSFIVLCQALTAAVVGLCYLKAQR 66 Query: 322 GGSSPAGRAPLLKYW----GVSITNTIGPTMGIEALQYISY 432 G R + K+W G+S+T+ + +LQY+ Y Sbjct: 67 SGY--GAREFIRKHWADVAGISLTHALSAPAANHSLQYVDY 105
>HUT1_ASPFU (Q4WJM7) UDP-galactose transporter homolog 1| Length = 415 Score = 43.1 bits (100), Expect = 3e-04 Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 19/116 (16%) Frame = +1 Query: 142 LAFCVGGIWSSYITQGILQETLSTKRF----------GPEERRFDHLAFLNFAQNVVCFV 291 LA CV GI++S+++ G+LQE ++T F P RF LN Q+ + Sbjct: 48 LAICVLGIYASFLSWGVLQEAITTVNFPVRPPTAEEPNPPTERFTFSIVLNTIQSTFAAI 107 Query: 292 WSFIMIKLWSGGSSPAG---------RAPLLKYWGVSITNTIGPTMGIEALQYISY 432 F+ + S+PAG R L VSI++++ G +L +I Y Sbjct: 108 TGFLYLYF----STPAGKKVPSIFPTRKILFPLLLVSISSSLASPFGYASLAHIDY 159
>HUT1_DEBHA (Q6BMV3) UDP-galactose transporter homolog 1| Length = 354 Score = 41.6 bits (96), Expect = 9e-04 Identities = 26/116 (22%), Positives = 57/116 (49%), Gaps = 14/116 (12%) Frame = +1 Query: 133 VAVLAFCVGGIWSSYITQGILQETLSTKRFGPEERR-----FDHLAFLNFAQ----NVVC 285 + LA C+ G+++S++T +LQE +STK +G F +N Q ++V Sbjct: 9 IITLAACILGLYASFLTWSVLQERISTKPYGSNPDTGSPDFFKAPLVINIIQAFFASIVG 68 Query: 286 FVWSFIM-----IKLWSGGSSPAGRAPLLKYWGVSITNTIGPTMGIEALQYISYPA 438 ++S + + +++ P + +S+T+++ +G E+L+++ Y A Sbjct: 69 LIYSVVSSRSNPLSIFTQNEKPVALKFFKSFVIISLTSSLSSPLGYESLKHVDYLA 124
>S35B1_XENLA (Q6GQ70) Solute carrier family 35 member B1 (Endoplasmic reticulum| nucleotide sugar transporter 1) Length = 320 Score = 40.8 bits (94), Expect = 0.001 Identities = 28/105 (26%), Positives = 53/105 (50%), Gaps = 7/105 (6%) Frame = +1 Query: 142 LAFCVGGIWSSYITQGILQETLSTKRFGPEER--RFDHLAFLNFAQNVVCFVWSFIMIKL 315 L C G++ Y GILQET++ + +G E+ +F L F Q +V +++ ++I+ Sbjct: 12 LLVCFLGVFVCYFYYGILQETITRRTYGEGEKQEKFRFALSLVFVQCIVNALFAKLLIQC 71 Query: 316 WSGGSSPAGRAPL-----LKYWGVSITNTIGPTMGIEALQYISYP 435 + G + ++ L L Y G +++ ALQ+++YP Sbjct: 72 FDSGKTDRTQSWLYSACSLSYLGAMVSSN-------SALQFVNYP 109
>S35B1_XENTR (Q8AXS6) Solute carrier family 35 member B1| Length = 323 Score = 40.0 bits (92), Expect = 0.003 Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 7/107 (6%) Frame = +1 Query: 136 AVLAFCVGGIWSSYITQGILQETLSTKRFGPEER--RFDHLAFLNFAQNVVCFVWSFIMI 309 A L C G++ Y GILQET++ +G E+ +F L F Q +V +++ ++I Sbjct: 12 ARLLVCFLGVFVCYFYYGILQETITRGTYGEGEKQEKFRFALSLVFVQCIVNALFAKLLI 71 Query: 310 KLWSGGSSPAGRAPL-----LKYWGVSITNTIGPTMGIEALQYISYP 435 + + G + ++ L L Y G +++ ALQ+++YP Sbjct: 72 QFFDSGKTDRTQSWLYAACSLSYLGAMVSSN-------SALQFVNYP 111
>HUT1_CANAL (Q5ADN8) UDP-galactose transporter homolog 1| Length = 370 Score = 39.7 bits (91), Expect = 0.003 Identities = 29/127 (22%), Positives = 60/127 (47%), Gaps = 23/127 (18%) Frame = +1 Query: 127 SRVAVLAFCVGGIWSSYITQGILQETLSTKRFGPEERRFDHLAFLNFAQ----NVVCFVW 294 ++ L CV G++ +++T ILQE ++TK +G F +N Q +++ F++ Sbjct: 20 NKALTLIICVCGLYGTFLTWSILQERINTKPYGDNNEYFKAPIIINLIQALFASIIGFIY 79 Query: 295 SFIMIKLWS----------GGSSPAG--------RAPLLKYW-GVSITNTIGPTMGIEAL 417 +++ S S+P +LK+ +SIT++I +G ++L Sbjct: 80 NYVTTTTTSTKTTTKTKTKTNSNPFSIFFTNGKQNCNVLKFMILISITSSIASPIGYKSL 139 Query: 418 QYISYPA 438 +++ Y A Sbjct: 140 KHLDYLA 146
>HUT1_YARLI (Q6C4X5) UDP-galactose transporter homolog 1| Length = 365 Score = 39.7 bits (91), Expect = 0.003 Identities = 23/107 (21%), Positives = 49/107 (45%), Gaps = 10/107 (9%) Frame = +1 Query: 142 LAFCVGGIWSSYITQGILQETLSTKRFGPEERRFDHLAFLNFAQNVVCFVWSFIMIKLWS 321 L CV GI++S++T +LQE ++T +GP+ + F +N Q+ + + ++ Sbjct: 45 LIICVSGIYASFLTWAVLQERIATTPYGPDNKIFRASLVINTVQSFLAAAVGYAYLQYKQ 104 Query: 322 GGSSPAG----------RAPLLKYWGVSITNTIGPTMGIEALQYISY 432 + G L + V+++ ++ + AL+Y+ Y Sbjct: 105 SRRAAKGLKKNTTVFDSMYTLKQLSLVALSQSLASPLSYTALKYVDY 151
>S35B1_BRARE (Q66HX0) Solute carrier family 35 member B1| Length = 329 Score = 39.3 bits (90), Expect = 0.004 Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 7/104 (6%) Frame = +1 Query: 145 AFCVGGIWSSYITQGILQETLSTKRF--GPEERRFDHLAFLNFAQNVVCFVWSFIMIKLW 318 A C G++ Y GILQET++ + ++ +F + L F Q ++ ++ ++I+ + Sbjct: 21 AVCFCGVFVCYFYYGILQETITRADYTHAGKKEKFRYATTLVFIQCIINAAFARLLIQFF 80 Query: 319 SGGSSPAGRAPL-----LKYWGVSITNTIGPTMGIEALQYISYP 435 G R+ L L Y G +++ ALQY++YP Sbjct: 81 EGSKQDHTRSWLYGLCSLSYLGAMVSSN-------SALQYVNYP 117
>HUT1_CANGA (Q6FSF8) UDP-galactose transporter homolog 1| Length = 362 Score = 37.4 bits (85), Expect = 0.016 Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 7/102 (6%) Frame = +1 Query: 148 FCVGGIWSSYITQGILQETLSTKRFGPEERRFDHLAFLNFAQNV--VCFVWSFIMIKLWS 321 FC GI++S++T ++QE L+T+ + +RF + Q V VC + ++ K Sbjct: 12 FCAAGIYASFLTWALVQEPLTTQVWENSHKRFQCPNVIAVVQAVAAVCVGYFYMRAK--- 68 Query: 322 GGSSPAGRAPLLKYWG-----VSITNTIGPTMGIEALQYISY 432 G G +++ + +S T + + ALQY+ Y Sbjct: 69 GAQRNYGAIAMVRDYAKPLALISFTQSASSPLSQYALQYVDY 110
>HUT1_SCHPO (Q8WZJ9) UDP-galactose transporter homolog 1| Length = 322 Score = 37.0 bits (84), Expect = 0.021 Identities = 30/112 (26%), Positives = 57/112 (50%), Gaps = 7/112 (6%) Frame = +1 Query: 121 LASRVAVLAFCVGGIWSSYITQGILQETLSTKRFGPEERRFDHLAFLNFAQN---VVC-F 288 +A + L C+ GI+ S+++ ++QE + T+ + E RF A L+ AQ+ V+C Sbjct: 1 MAGFMRQLFVCMIGIYGSFLSWAVMQEKIITRPYDGE--RFSSPALLSLAQSFMTVLCGL 58 Query: 289 VWSFIMIKLWSGGSSPAG--RAPLLKYW-GVSITNTIGPTMGIEALQYISYP 435 +W+ W G S G L Y+ ++I+ ++ G ++ ++SYP Sbjct: 59 LWN------WFHGVSARGLLEPKFLGYFSSIAISASLSSYFGYASMFHLSYP 104
>HUT1_KLULA (Q6CR04) UDP-galactose transporter homolog 1| Length = 339 Score = 36.2 bits (82), Expect = 0.036 Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 8/103 (7%) Frame = +1 Query: 148 FCVGGIWSSYITQGILQETLSTKRFGPEERRFDHLAFLNFAQNVVCFVWSFIMIKLWSGG 327 F VGGI+ S++T G+LQE L+T+ + F + Q + + I IK W Sbjct: 10 FAVGGIYCSFLTWGLLQEPLNTRVWPNSGCTFQVPYIVALVQATIAMICGLIYIK-W--- 65 Query: 328 SSPAGRAPLLKYWG--------VSITNTIGPTMGIEALQYISY 432 P L K+W +S++ I + +L Y+ + Sbjct: 66 QKPV--LSLSKFWTSHTRDMAIISLSQAISAPLAAYSLSYVDF 106
>UDB16_RABIT (O19103) UDP-glucuronosyltransferase 2B16 precursor (EC 2.4.1.17)| (UDPGT) (Fragment) Length = 523 Score = 30.4 bits (67), Expect = 2.0 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = -2 Query: 380 VMLTPQYFRRGARPAGLLPPDHSLIIMKDQTKQTTFCAKLRNARW 246 V TP Y L PP + +IM D + Q TF +++N W Sbjct: 166 VRFTPGYTYEKYSGGLLFPPSYVPVIMSDLSGQMTFMERVKNMLW 210
>YDBH_SCHPO (Q10367) Hypothetical protein C22E12.17c in chromosome I| Length = 486 Score = 28.9 bits (63), Expect = 5.8 Identities = 11/47 (23%), Positives = 26/47 (55%) Frame = +1 Query: 247 HLAFLNFAQNVVCFVWSFIMIKLWSGGSSPAGRAPLLKYWGVSITNT 387 H++F+ F ++ V W++ +++ G + R ++ GVS+ N+ Sbjct: 57 HISFVRFLRSTVLDSWTYAQLRVMRVGGNENARNYFKRHGGVSLLNS 103
>NORB_PSEAE (Q59647) Nitric-oxide reductase subunit B (EC 1.7.99.7) (Nitric| oxide reductase cytochrome b subunit) (NOR large subunit) Length = 466 Score = 28.1 bits (61), Expect = 9.9 Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 8/90 (8%) Frame = +1 Query: 124 ASRVAVLAFCVGGIWS--------SYITQGILQETLSTKRFGPEERRFDHLAFLNFAQNV 279 A V+AF G+W +Y T G T T G H+AF + Sbjct: 312 AMGTTVMAFLGAGVWGFMHTLAPVNYYTHG----TQLTAAHG-------HMAFYGAYAMI 360 Query: 280 VCFVWSFIMIKLWSGGSSPAGRAPLLKYWG 369 V + S+ M +L G + R+ +L+ WG Sbjct: 361 VMTIISYAMPRLRGIGEAMDNRSQVLEMWG 390
>KKA5_STRFR (P00555) Aminoglycoside 3'-phosphotransferase (EC 2.7.1.95)| (Kanamycin kinase, type V) (Neomycin-kanamycin phosphotransferase type V) (APH(3')V) Length = 268 Score = 28.1 bits (61), Expect = 9.9 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = +3 Query: 375 HHQHHRPDHGDRGASVHQLPG 437 HH+ H + GD GA V+QL G Sbjct: 12 HHEWHAVNEGDSGAFVYQLTG 32 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,972,163 Number of Sequences: 219361 Number of extensions: 741637 Number of successful extensions: 2457 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 2253 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2436 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
