ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart58f12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF188293.1|AF188293 Festuca arundinacea cinnamyl alcohol dehydrogenase 1b mRNA, complete cds Length = 1339 Score = 410 bits (207), Expect = e-111 Identities = 303/335 (90%) Strand = Plus / Plus Query: 1 agaatgggcagcgtccatgcctccgagacgacagtcaccgggtgggccgccagggacgcc 60 ||||||||||||||| | |||||||||| ||| |||||||||||||||||||||||||| Sbjct: 37 agaatgggcagcgtcgacgcctccgagaagacgatcaccgggtgggccgccagggacgcc 96 Query: 61 accggccacctctccccctacacatacaccctcaggaaaacaggccctgaagatgtggtg 120 ||||||||||||||||||||||| |||| |||||||| || ||| |||||||||||||| Sbjct: 97 accggccacctctccccctacacgtacaacctcaggaggacgggcgctgaagatgtggtg 156 Query: 121 ttgaaggttaaatactgcggcatttgccacacggacatccaccaggtcaagaacgacctg 180 |||||||| ||||||||||| |||||||| ||| |||||||| ||||||| |||| Sbjct: 157 ctgaaggttctgtactgcggcatctgccacactgacctccaccagaccaagaaccacctt 216 Query: 181 ggtgcttccaagtatcccatggtcccagggcatgaggtggttggcgaggtggtggaggtc 240 |||||||| || || |||||||| || |||||||||||||| |||||||||||||||||| Sbjct: 217 ggtgcttcaaaataccccatggtacccgggcatgaggtggtaggcgaggtggtggaggtc 276 Query: 241 gggccggaggtgagcaagtaccgcgtcggcaacgtggtcggcgtgggggtgatcgtgggg 300 ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||| Sbjct: 277 gggccggaggtgagcaagtacagcgtcggcgacgtggtcggcgtgggggtgatcgtcggg 336 Query: 301 tgctgccgcgactgccggccgtgcaaggcgaacgt 335 ||||||||||||||||||||||||||||| ||||| Sbjct: 337 tgctgccgcgactgccggccgtgcaaggccaacgt 371
>gb|AF188292.1|AF188292 Festuca arundinacea cinnamyl alcohol dehydrogenase 1a mRNA, complete cds Length = 1501 Score = 410 bits (207), Expect = e-111 Identities = 303/335 (90%) Strand = Plus / Plus Query: 1 agaatgggcagcgtccatgcctccgagacgacagtcaccgggtgggccgccagggacgcc 60 ||||||||||||||| | |||||||||| ||| |||||||||||||||||||||||||| Sbjct: 37 agaatgggcagcgtcgacgcctccgagaagacgatcaccgggtgggccgccagggacgcc 96 Query: 61 accggccacctctccccctacacatacaccctcaggaaaacaggccctgaagatgtggtg 120 ||||||||||||||||||||||| |||| |||||||| || ||| |||||||||||||| Sbjct: 97 accggccacctctccccctacacgtacaacctcaggaggacgggcgctgaagatgtggtg 156 Query: 121 ttgaaggttaaatactgcggcatttgccacacggacatccaccaggtcaagaacgacctg 180 |||||||| ||||||||||| |||||||| ||| |||||||| ||||||| |||| Sbjct: 157 ctgaaggttctgtactgcggcatctgccacactgacctccaccagaccaagaaccacctt 216 Query: 181 ggtgcttccaagtatcccatggtcccagggcatgaggtggttggcgaggtggtggaggtc 240 |||||||| || || |||||||| || |||||||||||||| |||||||||||||||||| Sbjct: 217 ggtgcttcaaaataccccatggtacccgggcatgaggtggtaggcgaggtggtggaggtc 276 Query: 241 gggccggaggtgagcaagtaccgcgtcggcaacgtggtcggcgtgggggtgatcgtgggg 300 ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||| Sbjct: 277 gggccggaggtgagcaagtacagcgtcggcgacgtggtcggcgtgggggtgatcgtcggg 336 Query: 301 tgctgccgcgactgccggccgtgcaaggcgaacgt 335 ||||||||||||||||||||||||||||| ||||| Sbjct: 337 tgctgccgcgactgccggccgtgcaaggccaacgt 371
>gb|AF010290.1|AF010290 Lolium perenne cinnamyl alcohol dehydrogenase mRNA, complete cds Length = 1382 Score = 387 bits (195), Expect = e-104 Identities = 300/335 (89%) Strand = Plus / Plus Query: 1 agaatgggcagcgtccatgcctccgagacgacagtcaccgggtgggccgccagggacgcc 60 ||||||||||||||| | |||||||||| ||| ||||||| |||||||||||||||||| Sbjct: 78 agaatgggcagcgtcgacgcctccgagaagacgatcaccggctgggccgccagggacgcc 137 Query: 61 accggccacctctccccctacacatacaccctcaggaaaacaggccctgaagatgtggtg 120 ||||||||||||||||| ||||| |||| |||||||| || ||| |||||||||||||| Sbjct: 138 accggccacctctccccgtacacgtacaacctcaggaggacgggcgctgaagatgtggtg 197 Query: 121 ttgaaggttaaatactgcggcatttgccacacggacatccaccaggtcaagaacgacctg 180 |||||||| ||||||||||| |||||||| ||| |||||||| ||||||| |||| Sbjct: 198 ctgaaggttctgtactgcggcatctgccacactgacctccaccagaccaagaaccacctt 257 Query: 181 ggtgcttccaagtatcccatggtcccagggcatgaggtggttggcgaggtggtggaggtc 240 |||||||| || || |||||||| || |||||||||||||| |||||||||||||||||| Sbjct: 258 ggtgcttcaaaataccccatggttcccgggcatgaggtggtaggcgaggtggtggaggtc 317 Query: 241 gggccggaggtgagcaagtaccgcgtcggcaacgtggtcggcgtgggggtgatcgtgggg 300 ||||||||||||||||||||| |||||||| | ||||||||||||||||||||||| ||| Sbjct: 318 gggccggaggtgagcaagtacagcgtcggcgatgtggtcggcgtgggggtgatcgttggg 377 Query: 301 tgctgccgcgactgccggccgtgcaaggcgaacgt 335 ||||||||||||||||||||||||||||| ||||| Sbjct: 378 tgctgccgcgactgccggccgtgcaaggccaacgt 412
>gb|AF188295.1|AF188295 Festuca arundinacea cinnamyl alcohol dehydrogenase 2b mRNA, complete cds Length = 1526 Score = 363 bits (183), Expect = 2e-97 Identities = 297/335 (88%) Strand = Plus / Plus Query: 1 agaatgggcagcgtccatgcctccgagacgacagtcaccgggtgggccgccagggacgcc 60 |||||||||||||| | |||||||||| ||| ||||||||||||||||||||||| || Sbjct: 88 agaatgggcagcgtggacgcctccgagaagacgatcaccgggtgggccgccagggacacc 147 Query: 61 accggccacctctccccctacacatacaccctcaggaaaacaggccctgaagatgtggtg 120 ||||| ||||||||||||||||| ||||||||||||| || ||| |||||||||||||| Sbjct: 148 accggtcacctctccccctacacctacaccctcaggaggacgggcgctgaagatgtggtg 207 Query: 121 ttgaaggttaaatactgcggcatttgccacacggacatccaccaggtcaagaacgacctg 180 |||||||| ||||||||||| |||||||| ||| |||||||| ||||||| |||| Sbjct: 208 ctgaaggttctgtactgcggcatctgccacactgacctccaccagaccaagaaccacctt 267 Query: 181 ggtgcttccaagtatcccatggtcccagggcatgaggtggttggcgaggtggtggaggtc 240 ||||| || || || |||||||| || |||||||||||||| |||||||||||||||||| Sbjct: 268 ggtgcctcaaaataccccatggttcccgggcatgaggtggtaggcgaggtggtggaggtc 327 Query: 241 gggccggaggtgagcaagtaccgcgtcggcaacgtggtcggcgtgggggtgatcgtgggg 300 ||||| ||||||||||||||| |||||||| ||||||||||||| ||||||||||| ||| Sbjct: 328 gggccagaggtgagcaagtacagcgtcggcgacgtggtcggcgttggggtgatcgtcggg 387 Query: 301 tgctgccgcgactgccggccgtgcaaggcgaacgt 335 ||||||||||||||| ||||||||||||| ||||| Sbjct: 388 tgctgccgcgactgcaggccgtgcaaggccaacgt 422
>gb|AF188294.1|AF188294 Festuca arundinacea cinnamyl alcohol dehydrogenase 2a mRNA, complete cds Length = 1322 Score = 363 bits (183), Expect = 2e-97 Identities = 297/335 (88%) Strand = Plus / Plus Query: 1 agaatgggcagcgtccatgcctccgagacgacagtcaccgggtgggccgccagggacgcc 60 |||||||||||||| | |||||||||| ||| ||||||||||||||||||||||| || Sbjct: 88 agaatgggcagcgtggacgcctccgagaagacgatcaccgggtgggccgccagggacacc 147 Query: 61 accggccacctctccccctacacatacaccctcaggaaaacaggccctgaagatgtggtg 120 ||||| ||||||||||||||||| ||||||||||||| || ||| |||||||||||||| Sbjct: 148 accggtcacctctccccctacacctacaccctcaggaggacgggcgctgaagatgtggtg 207 Query: 121 ttgaaggttaaatactgcggcatttgccacacggacatccaccaggtcaagaacgacctg 180 |||||||| ||||||||||| |||||||| ||| |||||||| ||||||| |||| Sbjct: 208 ctgaaggttctgtactgcggcatctgccacactgacctccaccagaccaagaaccacctt 267 Query: 181 ggtgcttccaagtatcccatggtcccagggcatgaggtggttggcgaggtggtggaggtc 240 ||||| || || || |||||||| || |||||||||||||| |||||||||||||||||| Sbjct: 268 ggtgcctcaaaataccccatggttcccgggcatgaggtggtaggcgaggtggtggaggtc 327 Query: 241 gggccggaggtgagcaagtaccgcgtcggcaacgtggtcggcgtgggggtgatcgtgggg 300 ||||| ||||||||||||||| |||||||| ||||||||||||| ||||||||||| ||| Sbjct: 328 gggccagaggtgagcaagtacagcgtcggcgacgtggtcggcgttggggtgatcgtcggg 387 Query: 301 tgctgccgcgactgccggccgtgcaaggcgaacgt 335 ||||||||||||||| ||||||||||||| ||||| Sbjct: 388 tgctgccgcgactgcaggccgtgcaaggccaacgt 422
>emb|Y13733.1|ZMCADGENE Zea mays mRNA for cinnamyl alcohol dehydrogense Length = 1516 Score = 319 bits (161), Expect = 3e-84 Identities = 263/297 (88%) Strand = Plus / Plus Query: 39 cgggtgggccgccagggacgccaccggccacctctccccctacacatacaccctcaggaa 98 ||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||| Sbjct: 160 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 219 Query: 99 aacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacacggacat 158 ||||||||||||||||||||| ||||||| |||||||| || |||||||||||||| Sbjct: 220 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 279 Query: 159 ccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtcccagggcatgaggt 218 |||||||| ||||||| |||| || ||||| |||||||| |||||||| ||||| ||||| Sbjct: 280 ccaccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 339 Query: 219 ggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggcaacgtggt 278 ||| ||||||||||||||||||||||| || ||| ||||||| |||||||| ||||||| Sbjct: 340 ggtcggcgaggtggtggaggtcgggcccgaagtggccaagtacggcgtcggcgacgtggt 399 Query: 279 cggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggcgaacgt 335 ||||| ||||||||||| |||||||||||||| ||| | || |||||||| ||||| Sbjct: 400 aggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgt 456
>emb|AJ005702.1|ZMA5702 Zea mays mRNA for cinnamyl alcohol dehydrogenase Length = 1517 Score = 319 bits (161), Expect = 3e-84 Identities = 263/297 (88%) Strand = Plus / Plus Query: 39 cgggtgggccgccagggacgccaccggccacctctccccctacacatacaccctcaggaa 98 ||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||| Sbjct: 105 cgggtgggccgccagggacgccaccggacacctctccccctactcctacaccctcaggaa 164 Query: 99 aacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacacggacat 158 ||||||||||||||||||||| ||||||| |||||||| || |||||||||||||| Sbjct: 165 cacaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacat 224 Query: 159 ccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtcccagggcatgaggt 218 |||||||| |||||| |||| || ||||| |||||||| |||||||| ||||| ||||| Sbjct: 225 ccaccaggcaaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggt 284 Query: 219 ggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggcaacgtggt 278 ||| ||||||||||||||||||||||| |||||| ||||||| |||||||| ||||||| Sbjct: 285 ggtcggcgaggtggtggaggtcgggcccgaggtggccaagtacggcgtcggcgacgtggt 344 Query: 279 cggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggcgaacgt 335 ||||| ||||||||||| |||||||||||||| ||| | || |||||||| ||||| Sbjct: 345 aggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgt 401
>ref|XM_464388.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1387 Score = 299 bits (151), Expect = 3e-78 Identities = 268/307 (87%) Strand = Plus / Plus Query: 23 ccgagacgacagtcaccgggtgggccgccagggacgccaccggccacctctccccctaca 82 |||||| ||| ||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 158 ccgagaagaccgtcaccgggtgggccgccagggacgcctccggccacctcaccccctaca 217 Query: 83 catacaccctcaggaaaacaggccctgaagatgtggtgttgaaggttaaatactgcggca 142 |||||||||||||| || || ||||||||||||||| |||||||| || || || | Sbjct: 218 actacaccctcaggaagactgggcctgaagatgtggtggtgaaggttttgtattgtggta 277 Query: 143 tttgccacacggacatccaccaggtcaagaacgacctgggtgcttccaagtatcccatgg 202 | ||||| || ||||||||||||| ||||||| |||| |||||||||||||| ||||||| Sbjct: 278 tctgccatactgacatccaccaggccaagaaccaccttggtgcttccaagtaccccatgg 337 Query: 203 tcccagggcatgaggtggttggcgaggtggtggaggtcgggccggaggtgagcaagtacc 262 |||| || ||||||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 338 tccctggccatgaggtggtcggcgaggtggtggaggtcgggccggaggtgaccaagtaca 397 Query: 263 gcgtcggcaacgtggtcggcgtgggggtgatcgtggggtgctgccgcgactgccggccgt 322 ||| |||| |||| |||||||| || || ||||| || ||||||||||| |||| |||| Sbjct: 398 gcgccggcgacgtcgtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgt 457 Query: 323 gcaaggc 329 ||||||| Sbjct: 458 gcaaggc 464
>ref|XM_506737.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1073_F05.31 mRNA Length = 1396 Score = 299 bits (151), Expect = 3e-78 Identities = 268/307 (87%) Strand = Plus / Plus Query: 23 ccgagacgacagtcaccgggtgggccgccagggacgccaccggccacctctccccctaca 82 |||||| ||| ||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 152 ccgagaagaccgtcaccgggtgggccgccagggacgcctccggccacctcaccccctaca 211 Query: 83 catacaccctcaggaaaacaggccctgaagatgtggtgttgaaggttaaatactgcggca 142 |||||||||||||| || || ||||||||||||||| |||||||| || || || | Sbjct: 212 actacaccctcaggaagactgggcctgaagatgtggtggtgaaggttttgtattgtggta 271 Query: 143 tttgccacacggacatccaccaggtcaagaacgacctgggtgcttccaagtatcccatgg 202 | ||||| || ||||||||||||| ||||||| |||| |||||||||||||| ||||||| Sbjct: 272 tctgccatactgacatccaccaggccaagaaccaccttggtgcttccaagtaccccatgg 331 Query: 203 tcccagggcatgaggtggttggcgaggtggtggaggtcgggccggaggtgagcaagtacc 262 |||| || ||||||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 332 tccctggccatgaggtggtcggcgaggtggtggaggtcgggccggaggtgaccaagtaca 391 Query: 263 gcgtcggcaacgtggtcggcgtgggggtgatcgtggggtgctgccgcgactgccggccgt 322 ||| |||| |||| |||||||| || || ||||| || ||||||||||| |||| |||| Sbjct: 392 gcgccggcgacgtcgtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgt 451 Query: 323 gcaaggc 329 ||||||| Sbjct: 452 gcaaggc 458
>dbj|AK105011.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-H09, full insert sequence Length = 1376 Score = 299 bits (151), Expect = 3e-78 Identities = 268/307 (87%) Strand = Plus / Plus Query: 23 ccgagacgacagtcaccgggtgggccgccagggacgccaccggccacctctccccctaca 82 |||||| ||| ||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 151 ccgagaagaccgtcaccgggtgggccgccagggacgcctccggccacctcaccccctaca 210 Query: 83 catacaccctcaggaaaacaggccctgaagatgtggtgttgaaggttaaatactgcggca 142 |||||||||||||| || || ||||||||||||||| |||||||| || || || | Sbjct: 211 actacaccctcaggaagactgggcctgaagatgtggtggtgaaggttttgtattgtggta 270 Query: 143 tttgccacacggacatccaccaggtcaagaacgacctgggtgcttccaagtatcccatgg 202 | ||||| || ||||||||||||| ||||||| |||| |||||||||||||| ||||||| Sbjct: 271 tctgccatactgacatccaccaggccaagaaccaccttggtgcttccaagtaccccatgg 330 Query: 203 tcccagggcatgaggtggttggcgaggtggtggaggtcgggccggaggtgagcaagtacc 262 |||| || ||||||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 331 tccctggccatgaggtggtcggcgaggtggtggaggtcgggccggaggtgaccaagtaca 390 Query: 263 gcgtcggcaacgtggtcggcgtgggggtgatcgtggggtgctgccgcgactgccggccgt 322 ||| |||| |||| |||||||| || || ||||| || ||||||||||| |||| |||| Sbjct: 391 gcgccggcgacgtcgtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgt 450 Query: 323 gcaaggc 329 ||||||| Sbjct: 451 gcaaggc 457
>dbj|AK071794.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114I07, full insert sequence Length = 1396 Score = 299 bits (151), Expect = 3e-78 Identities = 268/307 (87%) Strand = Plus / Plus Query: 23 ccgagacgacagtcaccgggtgggccgccagggacgccaccggccacctctccccctaca 82 |||||| ||| ||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 152 ccgagaagaccgtcaccgggtgggccgccagggacgcctccggccacctcaccccctaca 211 Query: 83 catacaccctcaggaaaacaggccctgaagatgtggtgttgaaggttaaatactgcggca 142 |||||||||||||| || || ||||||||||||||| |||||||| || || || | Sbjct: 212 actacaccctcaggaagactgggcctgaagatgtggtggtgaaggttttgtattgtggta 271 Query: 143 tttgccacacggacatccaccaggtcaagaacgacctgggtgcttccaagtatcccatgg 202 | ||||| || ||||||||||||| ||||||| |||| |||||||||||||| ||||||| Sbjct: 272 tctgccatactgacatccaccaggccaagaaccaccttggtgcttccaagtaccccatgg 331 Query: 203 tcccagggcatgaggtggttggcgaggtggtggaggtcgggccggaggtgagcaagtacc 262 |||| || ||||||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 332 tccctggccatgaggtggtcggcgaggtggtggaggtcgggccggaggtgaccaagtaca 391 Query: 263 gcgtcggcaacgtggtcggcgtgggggtgatcgtggggtgctgccgcgactgccggccgt 322 ||| |||| |||| |||||||| || || ||||| || ||||||||||| |||| |||| Sbjct: 392 gcgccggcgacgtcgtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgt 451 Query: 323 gcaaggc 329 ||||||| Sbjct: 452 gcaaggc 458
>emb|AJ231135.1|SOF231135 Saccharum officinarum mRNA for cinnamyl alcohol dehydrogenase Length = 1593 Score = 272 bits (137), Expect = 7e-70 Identities = 239/273 (87%) Strand = Plus / Plus Query: 39 cgggtgggccgccagggacgccaccggccacctctccccctacacatacaccctcaggaa 98 ||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||| Sbjct: 216 cgggtgggccgccagggacgccaccggacacctcgccccctacacctacaccctcaggag 275 Query: 99 aacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacacggacat 158 ||||||||||||||||||||| ||||||| ||||| || || |||||||| ||||| Sbjct: 276 cacaggccctgaagatgtggtggtgaaggtgctctactgtgggatctgccacacagacat 335 Query: 159 ccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtcccagggcatgaggt 218 |||||||| ||||||| |||| || ||||| ||||| ||||||||||| ||||| || || Sbjct: 336 ccaccaggccaagaaccacctcggggcttcaaagtaccccatggtccctgggcacgaagt 395 Query: 219 ggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggcaacgtggt 278 ||| || ||||||||||| |||||||| || |||| ||||||| |||||||| ||||||| Sbjct: 396 ggtcggtgaggtggtggaagtcgggcccgaagtgaccaagtacggcgtcggcgacgtggt 455 Query: 279 cggcgtgggggtgatcgtggggtgctgccgcga 311 ||||| ||||||||||| |||||||||||||| Sbjct: 456 aggcgtcggggtgatcgtcgggtgctgccgcga 488
>gb|AY109876.1| Zea mays CL1675_1 mRNA sequence Length = 1649 Score = 238 bits (120), Expect = 9e-60 Identities = 207/236 (87%) Strand = Plus / Plus Query: 100 acaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacacggacatc 159 ||||||||||||||||||||| ||||||| |||||||| || ||||||||||||||| Sbjct: 222 acaggccctgaagatgtggtggtgaaggtgctctactgcgggatctgccacacggacatc 281 Query: 160 caccaggtcaagaacgacctgggtgcttccaagtatcccatggtcccagggcatgaggtg 219 ||||||| ||||||| |||| || ||||| |||||||| |||||||| ||||| |||||| Sbjct: 282 caccaggccaagaaccacctcggggcttcaaagtatcctatggtccctgggcacgaggtg 341 Query: 220 gttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggcaacgtggtc 279 || ||||||||||||||||||||||| |||||| ||||||| |||||||| ||||||| Sbjct: 342 gtcggcgaggtggtggaggtcgggcccgaggtggccaagtacggcgtcggcgacgtggta 401 Query: 280 ggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggcgaacgt 335 ||||| ||||||||||| |||||||||||||| ||| | || |||||||| ||||| Sbjct: 402 ggcgtcggggtgatcgttgggtgctgccgcgagtgcagcccctgcaaggccaacgt 457 Score = 54.0 bits (27), Expect = 3e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 39 cgggtgggccgccagggacgccaccgg 65 ||||||||||||||||||||||||||| Sbjct: 161 cgggtgggccgccagggacgccaccgg 187
>dbj|AK059804.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-G04, full insert sequence Length = 1103 Score = 192 bits (97), Expect = 5e-46 Identities = 163/185 (88%) Strand = Plus / Plus Query: 145 tgccacacggacatccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtc 204 ||||| || ||||||||||||| ||||||| |||| |||||||||||||| ||||||||| Sbjct: 17 tgccatactgacatccaccaggccaagaaccaccttggtgcttccaagtaccccatggtc 76 Query: 205 ccagggcatgaggtggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgc 264 || || ||||||||||| ||||||||||||||||||||||||||||||| ||||||| || Sbjct: 77 cctggccatgaggtggtcggcgaggtggtggaggtcgggccggaggtgaccaagtacagc 136 Query: 265 gtcggcaacgtggtcggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgc 324 | |||| |||| |||||||| || || ||||| || ||||||||||| |||| |||||| Sbjct: 137 gccggcgacgtcgtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgtgc 196 Query: 325 aaggc 329 ||||| Sbjct: 197 aaggc 201
>gb|DQ234272.1| Oryza sativa (indica cultivar-group) cinnamyl-alcohol dehydrogenase (GH2) gene, complete cds Length = 4320 Score = 125 bits (63), Expect = 1e-25 Identities = 105/119 (88%) Strand = Plus / Plus Query: 211 catgaggtggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggc 270 ||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||| |||| Sbjct: 2075 catgaggtggtcggcgaggtggtggaggtcgggccggaggtgaccaagtacagcgccggc 2134 Query: 271 aacgtggtcggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggc 329 |||| |||||||| || || ||||| || ||||||||||| |||| ||||||||||| Sbjct: 2135 gacgtcgtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgtgcaaggc 2193 Score = 99.6 bits (50), Expect = 6e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 23 ccgagacgacagtcaccgggtgggccgccagggacgccaccggccacctctccccctaca 82 |||||| ||| ||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 353 ccgagaagaccgtcaccgggtgggccgccagggacgcctccggccacctcaccccctaca 412 Query: 83 catacaccctcagg 96 |||||||||||| Sbjct: 413 actacaccctcagg 426 Score = 91.7 bits (46), Expect = 1e-15 Identities = 97/114 (85%) Strand = Plus / Plus Query: 93 caggaaaacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacac 152 |||||| || || ||||||||||||||| |||||||| || || || || ||||| || Sbjct: 1329 caggaagactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatac 1388 Query: 153 ggacatccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtccc 206 ||||||||||||| ||||||| |||| |||||||||||||| ||||||||||| Sbjct: 1389 tgacatccaccaggccaagaaccaccttggtgcttccaagtaccccatggtccc 1442
>tpg|BK003969.1| TPA: TPA_exp: Oryza sativa (japonica cultivar-group) cinnamyl alcohol dehydrogenase (CAD2) gene, complete cds Length = 4183 Score = 125 bits (63), Expect = 1e-25 Identities = 105/119 (88%) Strand = Plus / Plus Query: 211 catgaggtggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggc 270 ||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||| |||| Sbjct: 1916 catgaggtggtcggcgaggtggtggaggtcgggccggaggtgaccaagtacagcgccggc 1975 Query: 271 aacgtggtcggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggc 329 |||| |||||||| || || ||||| || ||||||||||| |||| ||||||||||| Sbjct: 1976 gacgtcgtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgtgcaaggc 2034 Score = 99.6 bits (50), Expect = 6e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 23 ccgagacgacagtcaccgggtgggccgccagggacgccaccggccacctctccccctaca 82 |||||| ||| ||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 275 ccgagaagaccgtcaccgggtgggccgccagggacgcctccggccacctcaccccctaca 334 Query: 83 catacaccctcagg 96 |||||||||||| Sbjct: 335 actacaccctcagg 348 Score = 91.7 bits (46), Expect = 1e-15 Identities = 97/114 (85%) Strand = Plus / Plus Query: 93 caggaaaacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacac 152 |||||| || || ||||||||||||||| |||||||| || || || || ||||| || Sbjct: 1170 caggaagactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatac 1229 Query: 153 ggacatccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtccc 206 ||||||||||||| ||||||| |||| |||||||||||||| ||||||||||| Sbjct: 1230 tgacatccaccaggccaagaaccaccttggtgcttccaagtaccccatggtccc 1283
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 125 bits (63), Expect = 1e-25 Identities = 105/119 (88%) Strand = Plus / Minus Query: 211 catgaggtggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggc 270 ||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||| |||| Sbjct: 4872244 catgaggtggtcggcgaggtggtggaggtcgggccggaggtgaccaagtacagcgccggc 4872185 Query: 271 aacgtggtcggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggc 329 |||| |||||||| || || ||||| || ||||||||||| |||| ||||||||||| Sbjct: 4872184 gacgtcgtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgtgcaaggc 4872126 Score = 99.6 bits (50), Expect = 6e-18 Identities = 68/74 (91%) Strand = Plus / Minus Query: 23 ccgagacgacagtcaccgggtgggccgccagggacgccaccggccacctctccccctaca 82 |||||| ||| ||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 4873885 ccgagaagaccgtcaccgggtgggccgccagggacgcctccggccacctcaccccctaca 4873826 Query: 83 catacaccctcagg 96 |||||||||||| Sbjct: 4873825 actacaccctcagg 4873812 Score = 91.7 bits (46), Expect = 1e-15 Identities = 97/114 (85%) Strand = Plus / Minus Query: 93 caggaaaacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacac 152 |||||| || || ||||||||||||||| |||||||| || || || || ||||| || Sbjct: 4872990 caggaagactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatac 4872931 Query: 153 ggacatccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtccc 206 ||||||||||||| ||||||| |||| |||||||||||||| ||||||||||| Sbjct: 4872930 tgacatccaccaggccaagaaccaccttggtgcttccaagtaccccatggtccc 4872877
>dbj|AP003990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1073_F05 Length = 124252 Score = 125 bits (63), Expect = 1e-25 Identities = 105/119 (88%) Strand = Plus / Minus Query: 211 catgaggtggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggc 270 ||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||| |||| Sbjct: 114403 catgaggtggtcggcgaggtggtggaggtcgggccggaggtgaccaagtacagcgccggc 114344 Query: 271 aacgtggtcggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggc 329 |||| |||||||| || || ||||| || ||||||||||| |||| ||||||||||| Sbjct: 114343 gacgtcgtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgtgcaaggc 114285 Score = 99.6 bits (50), Expect = 6e-18 Identities = 68/74 (91%) Strand = Plus / Minus Query: 23 ccgagacgacagtcaccgggtgggccgccagggacgccaccggccacctctccccctaca 82 |||||| ||| ||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 116044 ccgagaagaccgtcaccgggtgggccgccagggacgcctccggccacctcaccccctaca 115985 Query: 83 catacaccctcagg 96 |||||||||||| Sbjct: 115984 actacaccctcagg 115971 Score = 91.7 bits (46), Expect = 1e-15 Identities = 97/114 (85%) Strand = Plus / Minus Query: 93 caggaaaacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacac 152 |||||| || || ||||||||||||||| |||||||| || || || || ||||| || Sbjct: 115149 caggaagactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatac 115090 Query: 153 ggacatccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtccc 206 ||||||||||||| ||||||| |||| |||||||||||||| ||||||||||| Sbjct: 115089 tgacatccaccaggccaagaaccaccttggtgcttccaagtaccccatggtccc 115036
>dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1145_F01 Length = 113755 Score = 125 bits (63), Expect = 1e-25 Identities = 105/119 (88%) Strand = Plus / Minus Query: 211 catgaggtggttggcgaggtggtggaggtcgggccggaggtgagcaagtaccgcgtcggc 270 ||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||| |||| Sbjct: 16983 catgaggtggtcggcgaggtggtggaggtcgggccggaggtgaccaagtacagcgccggc 16924 Query: 271 aacgtggtcggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggc 329 |||| |||||||| || || ||||| || ||||||||||| |||| ||||||||||| Sbjct: 16923 gacgtcgtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgtgcaaggc 16865 Score = 99.6 bits (50), Expect = 6e-18 Identities = 68/74 (91%) Strand = Plus / Minus Query: 23 ccgagacgacagtcaccgggtgggccgccagggacgccaccggccacctctccccctaca 82 |||||| ||| ||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 18624 ccgagaagaccgtcaccgggtgggccgccagggacgcctccggccacctcaccccctaca 18565 Query: 83 catacaccctcagg 96 |||||||||||| Sbjct: 18564 actacaccctcagg 18551 Score = 91.7 bits (46), Expect = 1e-15 Identities = 97/114 (85%) Strand = Plus / Minus Query: 93 caggaaaacaggccctgaagatgtggtgttgaaggttaaatactgcggcatttgccacac 152 |||||| || || ||||||||||||||| |||||||| || || || || ||||| || Sbjct: 17729 caggaagactgggcctgaagatgtggtggtgaaggttttgtattgtggtatctgccatac 17670 Query: 153 ggacatccaccaggtcaagaacgacctgggtgcttccaagtatcccatggtccc 206 ||||||||||||| ||||||| |||| |||||||||||||| ||||||||||| Sbjct: 17669 tgacatccaccaggccaagaaccaccttggtgcttccaagtaccccatggtccc 17616
>dbj|D13991.1|AAICAD Aralia cordata cadac1 mRNA for cinnamyl alcohol dehydrogenase, complete cds Length = 1462 Score = 75.8 bits (38), Expect = 8e-11 Identities = 137/170 (80%) Strand = Plus / Plus Query: 70 ctctccccctacacatacaccctcaggaaaacaggccctgaagatgtggtgttgaaggtt 129 ||||| || ||||| ||||| |||||| |||||||||| |||||||| | | ||| || Sbjct: 184 ctctcaccatacacctacactctcagggaaacaggcccagaagatgtttttatcaagatt 243 Query: 130 aaatactgcggcatttgccacacggacatccaccaggtcaagaacgacctgggtgcttcc 189 | || || || |||||||| || || || |||||| ||||||| || || || |||||| Sbjct: 244 atttattgtgggatttgccatactgatattcaccagatcaagaatgatcttggagcttcc 303 Query: 190 aagtatcccatggtcccagggcatgaggtggttggcgaggtggtggaggt 239 || || || ||||| ||||||||||| |||||||| ||||| |||||||| Sbjct: 304 aattaccctatggttccagggcatgaagtggttggtgaggttgtggaggt 353
>gb|AY879285.1| Ocimum basilicum cinnamyl alcohol dehydrogenase (CAD) mRNA, complete cds Length = 1074 Score = 60.0 bits (30), Expect = 5e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 142 atttgccacacggacatccaccaggtcaagaacgacctgggtgcttccaagtatcccatg 201 ||||||||||| || |||||||| | ||||| ||||| || ||||| ||||||||| Sbjct: 136 atttgccacactgatgtccaccagattaagaatgaccttggcatgtccaactatcccatg 195 Query: 202 gtcccagggcatgaggtggttggcgaggtggtggaggt 239 || ||||||||||| ||||| || |||||||| ||||| Sbjct: 196 gttccagggcatgaagtggtaggtgaggtggttgaggt 233
>dbj|D86590.1| Zinnia elegans mRNA for cinnamyl alcohol dehydrogenase, partial cds Length = 1106 Score = 56.0 bits (28), Expect = 7e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 193 tatcccatggtcccagggcatgaggtggttggcgaggtggtggaggtcgggccgga 248 |||||||||||||| || ||||| ||||| || |||||||||||||| || ||||| Sbjct: 77 tatcccatggtccctggacatgaagtggtaggtgaggtggtggaggtgggaccgga 132
>gb|AY769938.1| Acacia mangium x Acacia auriculiformis cinnamyl alcohol dehydrogenase (CAD) mRNA, complete cds Length = 1346 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 187 tccaagtatcccatggtcccagggcatgaggtggttgg 224 ||||| ||||||||||| || ||||||||||||||||| Sbjct: 246 tccaattatcccatggttcctgggcatgaggtggttgg 283
>emb|AJ811963.1| Linum album mRNA for cinnamyl-alcohol dehydrogenase (cad gene) Length = 1291 Score = 48.1 bits (24), Expect = 0.018 Identities = 42/48 (87%) Strand = Plus / Plus Query: 135 ctgcggcatttgccacacggacatccaccaggtcaagaacgacctggg 182 |||||| || ||||| || || ||||||||||| |||||||||||||| Sbjct: 222 ctgcggaatctgccatacagatatccaccaggtgaagaacgacctggg 269
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 46.1 bits (23), Expect = 0.072 Identities = 32/35 (91%) Strand = Plus / Minus Query: 208 gggcatgaggtggttggcgaggtggtggaggtcgg 242 ||||| |||||||| ||||||||||||||| |||| Sbjct: 3214642 gggcacgaggtggtgggcgaggtggtggagatcgg 3214608
>gb|AY374447.1| Zea mays fatty aldehyde dehydrogenase 1 gene, complete cds Length = 4739 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 227 aggtggtggaggtcgggccggaggtg 252 |||||||||||| ||||||||||||| Sbjct: 2223 aggtggtggagggcgggccggaggtg 2248
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.28 Identities = 31/34 (91%) Strand = Plus / Minus Query: 133 tactgcggcatttgccacacggacatccaccagg 166 ||||||||| | |||||| ||||||||||||||| Sbjct: 1337168 tactgcggcgtctgccactcggacatccaccagg 1337135 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 gtcggcgtgggggtgatcgt 296 |||||||||||||||||||| Sbjct: 3925105 gtcggcgtgggggtgatcgt 3925086
>gb|AY107915.1| Zea mays PCO083188 mRNA sequence Length = 1182 Score = 44.1 bits (22), Expect = 0.28 Identities = 25/26 (96%) Strand = Plus / Plus Query: 227 aggtggtggaggtcgggccggaggtg 252 |||||||||||| ||||||||||||| Sbjct: 3 aggtggtggagggcgggccggaggtg 28
>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete sequence Length = 1438950 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 tgaagatgtggtgttgaaggt 128 ||||||||||||||||||||| Sbjct: 970233 tgaagatgtggtgttgaaggt 970253
>ref|XM_571622.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNF03260) partial mRNA Length = 3034 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 tgaagatgtggtgttgaaggt 128 ||||||||||||||||||||| Sbjct: 2196 tgaagatgtggtgttgaaggt 2176
>gb|AC126555.3| Mus musculus BAC clone RP23-474A17 from chromosome 13, complete sequence Length = 187704 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 212 atgaggtggttggcgaggtgg 232 ||||||||||||||||||||| Sbjct: 48904 atgaggtggttggcgaggtgg 48884
>gb|AC124183.4| Mus musculus BAC clone RP23-213I18 from 13, complete sequence Length = 215251 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 212 atgaggtggttggcgaggtgg 232 ||||||||||||||||||||| Sbjct: 11915 atgaggtggttggcgaggtgg 11935
>emb|BX842648.2| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 3/11 Length = 346416 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 130 aaatactgcggcatttgccacacggacat 158 |||||||||||||| |||||| ||||||| Sbjct: 157754 aaatactgcggcatctgccactcggacat 157726
>dbj|AK105739.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-A05, full insert sequence Length = 1091 Score = 42.1 bits (21), Expect = 1.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 277 gtcggcgtgggggtgatcgtggggtgctgccgcgactgccggccgtgcaaggc 329 |||||||| || || ||||| || ||||||||||| |||| ||||||||||| Sbjct: 551 gtcggcgtcggcgtcatcgtcggctgctgccgcgagtgccatccgtgcaaggc 603
>gb|AC114581.8| Mus musculus chromosome 8, clone RP23-170M20, complete sequence Length = 197312 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 tgaagatgtggtgttgaaggt 128 ||||||||||||||||||||| Sbjct: 18014 tgaagatgtggtgttgaaggt 18034
>gb|AC119202.6| Mus musculus chromosome 8, clone RP24-185N3, complete sequence Length = 159765 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 tgaagatgtggtgttgaaggt 128 ||||||||||||||||||||| Sbjct: 123652 tgaagatgtggtgttgaaggt 123672
>ref|XM_588261.2| PREDICTED: Bos taurus similar to regulating synaptic membrane exocytosis 4 (LOC539592), mRNA Length = 1294 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 acatccaccaggtcaagaac 174 |||||||||||||||||||| Sbjct: 1074 acatccaccaggtcaagaac 1055
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 ggcgaggtggtggaggtcgg 242 |||||||||||||||||||| Sbjct: 38505 ggcgaggtggtggaggtcgg 38486
>gb|AC140443.2| Mus musculus BAC clone RP24-171A23 from chromosome 13, complete sequence Length = 180633 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 cctctccccctacacataca 88 |||||||||||||||||||| Sbjct: 81024 cctctccccctacacataca 81005
>ref|XM_743486.1| Aspergillus fumigatus Af293 hypothetical protein (Afu3g02580) partial mRNA Length = 1002 Score = 40.1 bits (20), Expect = 4.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 134 actgcggcatttgccacacggacatcca 161 ||||||||||| |||||| ||||||||| Sbjct: 335 actgcggcattggccacaaggacatcca 308
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 tcggcaacgtggtcggcgtg 285 |||||||||||||||||||| Sbjct: 1207715 tcggcaacgtggtcggcgtg 1207734
>emb|AL118522.32|HSDJ781B1 Human DNA sequence from clone RP4-781B1 on chromosome 20 Contains the 5' end of a novel gene, the KCNK15 gene for potassium channel subfamily K member 15, a novel gene, the RIMS4 gene for regulating synaptic membrane exocytosis 4 and three CpG islands, complete sequence Length = 107109 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 acatccaccaggtcaagaac 174 |||||||||||||||||||| Sbjct: 18024 acatccaccaggtcaagaac 18043
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 cgtcggcaacgtggtcggcg 283 |||||||||||||||||||| Sbjct: 1299457 cgtcggcaacgtggtcggcg 1299476
>dbj|AK124626.1| Homo sapiens cDNA FLJ42635 fis, clone BRACE3022769 Length = 4595 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 acatccaccaggtcaagaac 174 |||||||||||||||||||| Sbjct: 519 acatccaccaggtcaagaac 500
>dbj|AK126807.1| Homo sapiens cDNA FLJ44857 fis, clone BRACE3052595, moderately similar to Rattus norvegicus Nim3 protein (Nim3) Length = 5104 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 acatccaccaggtcaagaac 174 |||||||||||||||||||| Sbjct: 1028 acatccaccaggtcaagaac 1009
>gb|AF472591.1| Lolium perenne cinnamyl alcohol dehydrogenase (CAD1) mRNA, complete cds Length = 1325 Score = 40.1 bits (20), Expect = 4.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 43 tgggccgccagggacgccaccggccacctctccccctaca 82 ||||| || ||||||||| |||| ||||||||||| |||| Sbjct: 49 tgggctgcgagggacgcctccggtcacctctccccttaca 88
>gb|AF294352.1| Homo sapiens tandem acid-sensitive potassium channel TASK5 (KCNK15) gene, complete cds Length = 16930 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 acatccaccaggtcaagaac 174 |||||||||||||||||||| Sbjct: 4498 acatccaccaggtcaagaac 4479
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 ggccgccagggacgccaccg 64 |||||||||||||||||||| Sbjct: 1204418 ggccgccagggacgccaccg 1204399
>gb|DP000042.1| Lemur catta target 106 genomic scaffold Length = 452647 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 acatccaccaggtcaagaac 174 |||||||||||||||||||| Sbjct: 5752 acatccaccaggtcaagaac 5771
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome Length = 5751492 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 tggtggaggtcgggccggag 249 |||||||||||||||||||| Sbjct: 3805543 tggtggaggtcgggccggag 3805524
>gb|AC008383.8|AC008383 Homo sapiens chromosome 5 clone CTC-222O22, complete sequence Length = 209114 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 cctctccccctacacataca 88 |||||||||||||||||||| Sbjct: 23714 cctctccccctacacataca 23695
>ref|NM_182970.2| Homo sapiens regulating synaptic membrane exocytosis 4 (RIMS4), mRNA Length = 5136 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 acatccaccaggtcaagaac 174 |||||||||||||||||||| Sbjct: 1058 acatccaccaggtcaagaac 1039
>ref|XM_343588.2| PREDICTED: Rattus norvegicus CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1 (predicted) (Ctdsp1_predicted), mRNA Length = 2765 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 ctctccccctacacatacac 89 |||||||||||||||||||| Sbjct: 2716 ctctccccctacacatacac 2735
>gb|AC108512.4| Homo sapiens BAC clone RP13-549D10 from 2, complete sequence Length = 76170 Score = 40.1 bits (20), Expect = 4.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 tctccccctacacatacaccctca 94 ||||||||||||||||||| |||| Sbjct: 27172 tctccccctacacatacacgctca 27149
>gb|AC008407.4|AC008407 Homo sapiens chromosome 5 clone CTC-278A2, complete sequence Length = 78849 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 cctctccccctacacataca 88 |||||||||||||||||||| Sbjct: 12974 cctctccccctacacataca 12993
>emb|BX648947.1|HSM809098 Homo sapiens mRNA; cDNA DKFZp686D0748 (from clone DKFZp686D0748) Length = 5000 Score = 40.1 bits (20), Expect = 4.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 acatccaccaggtcaagaac 174 |||||||||||||||||||| Sbjct: 898 acatccaccaggtcaagaac 879
>gb|AY104431.1| Zea mays PCO149657 mRNA sequence Length = 1491 Score = 40.1 bits (20), Expect = 4.4 Identities = 35/40 (87%) Strand = Plus / Plus Query: 43 tgggccgccagggacgccaccggccacctctccccctaca 82 ||||| |||||||||| | ||||| |||||||||||||| Sbjct: 256 tgggcggccagggacgactccggcgtcctctccccctaca 295 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,083,624 Number of Sequences: 3902068 Number of extensions: 2083624 Number of successful extensions: 48280 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 57 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 47852 Number of HSP's gapped (non-prelim): 414 length of query: 336 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 314 effective length of database: 17,147,199,772 effective search space: 5384220728408 effective search space used: 5384220728408 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
