ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart58d05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GPAT6_ARATH (O80437) Glycerol-3-phosphate acyltransferase 6 (EC ... 100 3e-21
2GPAT8_ARATH (Q5XF03) Probable glycerol-3-phosphate acyltransfera... 99 4e-21
3GPAT4_ARATH (Q9LMM0) Glycerol-3-phosphate acyltransferase 4 (EC ... 99 6e-21
4GPAT5_ARATH (Q9CAY3) Glycerol-3-phosphate acyltransferase 5 (EC ... 69 7e-12
5GPAT7_ARATH (Q9LHS7) Putative glycerol-3-phosphate acyltransfera... 65 9e-11
6GPAT2_ARATH (Q9FZ22) Probable glycerol-3-phosphate acyltransfera... 46 6e-05
7GPAT3_ARATH (Q9SYJ2) Probable glycerol-3-phosphate acyltransfera... 44 2e-04
8SYI_HELPY (P56456) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isole... 30 4.4
9GLND_VIBVY (Q7MIF8) [Protein-PII] uridylyltransferase (EC 2.7.7.... 29 5.7
10GLND_VIBVU (Q8DBG3) [Protein-PII] uridylyltransferase (EC 2.7.7.... 29 5.7
11PCSK5_BRACL (Q9NJ15) Proprotein convertase subtilisin/kexin type... 28 9.7
12LYSK_PYRKO (Q5JFW4) Acetyl-lysine deacetylase (EC 3.5.1.-) 28 9.7

>GPAT6_ARATH (O80437) Glycerol-3-phosphate acyltransferase 6 (EC 2.3.1.15)|
           (AtGPAT6)
          Length = 501

 Score =  100 bits (248), Expect = 3e-21
 Identities = 48/117 (41%), Positives = 65/117 (55%)
 Frame = +3

Query: 129 FPTVEKCASVGRSGDTVVADLDGTLLCGRSSFPYFAHMAFETXXXXXXXXXXXXXXXXXX 308
           F  + KC    RS  TV ADLDGTLL  RS+FPY+  +A E                   
Sbjct: 10  FEQISKCDVKDRSNHTVAADLDGTLLISRSAFPYYFLVALEAGSLLRALILLVSVPFVYL 69

Query: 309 XYYVVSESAGIQVLIFASMAGAKVDDVEAVARAVLPQFYCSDLHPESWRVFSACGRR 479
            Y  +SE+  I V +F + AG K+ DVE V R+VLP+FY  D+ P++WR+F+  G+R
Sbjct: 70  TYLTISETLAINVFVFITFAGLKIRDVELVVRSVLPRFYAEDVRPDTWRIFNTFGKR 126



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>GPAT8_ARATH (Q5XF03) Probable glycerol-3-phosphate acyltransferase 8 (EC|
           2.3.1.15)
          Length = 500

 Score = 99.4 bits (246), Expect = 4e-21
 Identities = 54/119 (45%), Positives = 69/119 (57%), Gaps = 2/119 (1%)
 Frame = +3

Query: 129 FPTVEKCASVGRSG--DTVVADLDGTLLCGRSSFPYFAHMAFETXXXXXXXXXXXXXXXX 302
           FP + +C    R G  D++ ADLDGTLL  RSSFPYF  +A E                 
Sbjct: 10  FPPITEC----RDGEYDSIAADLDGTLLLSRSSFPYFMLVAVEAGSLLRGLILLLSLPFV 65

Query: 303 XXXYYVVSESAGIQVLIFASMAGAKVDDVEAVARAVLPQFYCSDLHPESWRVFSACGRR 479
              Y  VSES GIQ+LIF S AG K+ D+E V+RAVLP+FY +D+  +S+ VF  C R+
Sbjct: 66  IISYLFVSESLGIQILIFISFAGLKIRDIELVSRAVLPRFYAADVRKDSFEVFDKCKRK 124



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>GPAT4_ARATH (Q9LMM0) Glycerol-3-phosphate acyltransferase 4 (EC 2.3.1.15)|
           (AtGPAT4)
          Length = 503

 Score = 99.0 bits (245), Expect = 6e-21
 Identities = 52/117 (44%), Positives = 68/117 (58%)
 Frame = +3

Query: 129 FPTVEKCASVGRSGDTVVADLDGTLLCGRSSFPYFAHMAFETXXXXXXXXXXXXXXXXXX 308
           FP + +C S  R  D++ ADLDGTLL  RSSFPYF  +A E                   
Sbjct: 10  FPPISECKS--REYDSIAADLDGTLLLSRSSFPYFMLVAIEAGSLFRGLILLLSLPIVII 67

Query: 309 XYYVVSESAGIQVLIFASMAGAKVDDVEAVARAVLPQFYCSDLHPESWRVFSACGRR 479
            Y  VSES GIQ+LIF S AG K+ ++E V+RAVL +FY +D+  +S+ VF  C +R
Sbjct: 68  AYLFVSESLGIQILIFISFAGIKIKNIELVSRAVLTRFYAADVRKDSFEVFDKCKKR 124



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>GPAT5_ARATH (Q9CAY3) Glycerol-3-phosphate acyltransferase 5 (EC 2.3.1.15)|
           (AtGPAT5)
          Length = 502

 Score = 68.9 bits (167), Expect = 7e-12
 Identities = 35/107 (32%), Positives = 58/107 (54%)
 Frame = +3

Query: 159 GRSGDTVVADLDGTLLCGRSSFPYFAHMAFETXXXXXXXXXXXXXXXXXXXYYVVSESAG 338
           G +  +VV++ +GT+L    SF YF  +AFE                         ++A 
Sbjct: 7   GTTSYSVVSEFEGTILKNADSFSYFMLVAFEAAGLIRFAILLFLWPVITLLDVFSYKNAA 66

Query: 339 IQVLIFASMAGAKVDDVEAVARAVLPQFYCSDLHPESWRVFSACGRR 479
           +++ IF +  G +  ++E+VARAVLP+FY  D+  ++WRVFS+C +R
Sbjct: 67  LKLKIFVATVGLREPEIESVARAVLPKFYMDDVSMDTWRVFSSCKKR 113



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>GPAT7_ARATH (Q9LHS7) Putative glycerol-3-phosphate acyltransferase 7 (EC|
           2.3.1.15) (AtGPAT7)
          Length = 500

 Score = 65.1 bits (157), Expect = 9e-11
 Identities = 32/102 (31%), Positives = 54/102 (52%)
 Frame = +3

Query: 174 TVVADLDGTLLCGRSSFPYFAHMAFETXXXXXXXXXXXXXXXXXXXYYVVSESAGIQVLI 353
           +VV++L+GTLL     F YF  +AFE                      +   +  ++++I
Sbjct: 10  SVVSELEGTLLKNPKPFAYFMLVAFEASGLIRFATLLFLWPIIALLDVLGYRNGSLKLMI 69

Query: 354 FASMAGAKVDDVEAVARAVLPQFYCSDLHPESWRVFSACGRR 479
           F + AG    ++E+VARAVLP+F+  D+  ++WR F +C +R
Sbjct: 70  FVATAGLHESEIESVARAVLPKFFMDDISMDAWRAFGSCDKR 111



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>GPAT2_ARATH (Q9FZ22) Probable glycerol-3-phosphate acyltransferase 2 (EC|
           2.3.1.15) (AtGPAT2)
          Length = 530

 Score = 45.8 bits (107), Expect = 6e-05
 Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
 Frame = +3

Query: 123 SPFPTVEKCASVGR------SGDTVVADLDGTLLCGRSSFPYFAHMAFETXXXXXXXXXX 284
           SP    +KC S G       S  T++ +++G LL   S FPYF  +AFE           
Sbjct: 29  SPKQKYQKCPSHGLHQYQDLSNHTLIFNVEGALLKSNSLFPYFMVVAFEAGGVIRSLFLL 88

Query: 285 XXXXXXXXXYYVVSESAGIQVLIFASMAGAKVDDVEAVARAVLPQFYCSDLHPESWRVFS 464
                      ++S   G++ ++  S  G K +    V ++VLP+++  D+  E ++V  
Sbjct: 89  VLYPFIS----LMSYEMGLKTMVMLSFFGVKKESFR-VGKSVLPKYFLEDVGLEMFQVLK 143

Query: 465 ACGRR 479
             G+R
Sbjct: 144 RGGKR 148



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>GPAT3_ARATH (Q9SYJ2) Probable glycerol-3-phosphate acyltransferase 3 (EC|
           2.3.1.15) (AtGPAT3)
          Length = 520

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 29/105 (27%), Positives = 49/105 (46%)
 Frame = +3

Query: 165 SGDTVVADLDGTLLCGRSSFPYFAHMAFETXXXXXXXXXXXXXXXXXXXYYVVSESAGIQ 344
           S  T++ +++G LL   S FPYF  +AFE                      ++S   G++
Sbjct: 43  SRHTLIFNVEGALLKSDSLFPYFMLVAFEAGGVIRSFLLFILYPLIS----LMSHEMGVK 98

Query: 345 VLIFASMAGAKVDDVEAVARAVLPQFYCSDLHPESWRVFSACGRR 479
           V++  S  G K +   A  RAVLP+++  D+  E + V    G++
Sbjct: 99  VMVMVSFFGIKKEGFRA-GRAVLPKYFLEDVGLEMFEVLKRGGKK 142



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>SYI_HELPY (P56456) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 920

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = -2

Query: 425 VELGQH-GARHGLDVVHLGAGHGREDEHLDPR 333
           V LG+H G   G   VH   GHG ED +L  R
Sbjct: 308 VALGEHVGLEDGTGAVHTAPGHGEEDYYLGLR 339



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>GLND_VIBVY (Q7MIF8) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 873

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +3

Query: 135 TVEKCASVGRSGDTVVADL-DGTLLCG 212
           TVE+CA++GR   TV  +L +  LLCG
Sbjct: 127 TVEECAAIGREDLTVATNLQEARLLCG 153



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>GLND_VIBVU (Q8DBG3) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 873

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +3

Query: 135 TVEKCASVGRSGDTVVADL-DGTLLCG 212
           TVE+CA++GR   TV  +L +  LLCG
Sbjct: 127 TVEECAAIGREDLTVATNLQEARLLCG 153



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>PCSK5_BRACL (Q9NJ15) Proprotein convertase subtilisin/kexin type 5 precursor (EC|
            3.4.21.-) (Proprotein convertase PC6-like) (aPC6)
          Length = 1696

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 21/67 (31%), Positives = 29/67 (43%)
 Frame = +3

Query: 21   EETETDQGTCIVACVPGEVGLXXXXXXXXXXXXXSPFPTVEKCASVGRSGDTVVADLDGT 200
            ++T  D+G CI +C PGE                +  PT ++C+      DT  A  DG 
Sbjct: 1259 DDTILDRGECITSCGPGE------YMDRREKKCKACHPTCKECSD--EYDDTCTACNDGF 1310

Query: 201  LLCGRSS 221
            LL   SS
Sbjct: 1311 LLTDASS 1317



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>LYSK_PYRKO (Q5JFW4) Acetyl-lysine deacetylase (EC 3.5.1.-)|
          Length = 344

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -2

Query: 452 PRLRVEVGAVELGQHGARHGLDVVHLGAGHGRED 351
           PRL+ + G  ++   G R G+D V  G G  R D
Sbjct: 263 PRLKKKTGTADMNILGPRFGVDAVAYGPGDSRLD 296


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,205,035
Number of Sequences: 219361
Number of extensions: 591297
Number of successful extensions: 2148
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2141
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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