>PCSK5_BRACL (Q9NJ15) Proprotein convertase subtilisin/kexin type 5 precursor|
           (EC 3.4.21.-) (Proprotein convertase PC6-like) (aPC6)
          Length = 1696

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +1

Query: 349 KCE-CNMYCLDCINGALCSQCLACHH 423
           KCE CN+ C  C NG+   QCL CHH
Sbjct: 873 KCEDCNIICKKC-NGSQADQCLECHH 897

>ITB7_MOUSE (P26011) Integrin beta-7 precursor (Integrin beta-P) (M290 IEL|
           antigen)
          Length = 806

 Score = 33.9 bits (76), Expect = 0.33
 Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +1

Query: 319 GQCKMHADAHKCECNM-YCLDCINGALCSQCLAC 417
           G C  H     C+CN   CLD   GALC QCL C
Sbjct: 611 GLCSGHG---YCKCNRCQCLDGYYGALCDQCLGC 641

>FUR1C_DROME (P30430) Furin-like protease 1, isoform 1-CRR precursor (EC|
            3.4.21.75) (Furin-1) (Kex2-like endoprotease 1) (dKLIP-1)
          Length = 1101

 Score = 32.7 bits (73), Expect = 0.73
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +1

Query: 358  CNMYCLDCINGALCSQCLACHHGHHAIQIRRSS--YHDVIRVSEIQKVLDIT 507
            C+  CL+C  GAL SQC  C  G    +I   +  Y  V+R + +  V+DI+
Sbjct: 949  CDRSCLECY-GALASQCSTCSPGSQLRKILNETFCYAYVVRSTGMASVVDIS 999

>ITB7_HUMAN (P26010) Integrin beta-7 precursor|
          Length = 798

 Score = 32.7 bits (73), Expect = 0.73
 Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +1

Query: 319 GQCKMHADAHKCECNM-YCLDCINGALCSQCLAC 417
           G C  H    +C+CN   CLD   GALC QC  C
Sbjct: 611 GLCSGHG---RCKCNRCQCLDGYYGALCDQCPGC 641

>LAMB2_RAT (P15800) Laminin beta-2 chain precursor (S-laminin) (Laminin chain|
            B3)
          Length = 1801

 Score = 32.3 bits (72), Expect = 0.95
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = +1

Query: 244  GGECDEAENQRWP-PWLKPLLATSFFGQCKMHADAHKCECNMYCLDCINGALCSQCLACH 420
            G  CD  +  +W  P  +P +      +C    DAH   C + C D   G  C +C+A  
Sbjct: 861  GLRCDHCQRGQWGFPNCRPCVCNGRADEC----DAHTGAC-LGCRDYTGGEHCERCIAGF 915

Query: 421  HG 426
            HG
Sbjct: 916  HG 917

>VPX_HV2SB (P12454) VPX protein (X ORF protein) (Viral accessory protein)|
          Length = 112

 Score = 32.3 bits (72), Expect = 0.95
 Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
 Frame = -1

Query: 446 RIWMAWWPWWQARHWEQRAPLMQSRQYMLHSHLCA--SACILHCPKKLVASSGLSHGGQR 273
           ++W   W +W   H EQ      SR Y  + +LC    A  +H  KK     G  HG   
Sbjct: 47  QVWQRSWRYW---HDEQG----MSRSYTKYRYLCLMQKAVFMHF-KKGCTCRGEGHGPGG 98

Query: 272 WFSASSHSPPP 240
           W S     PPP
Sbjct: 99  WRSGPPPPPPP 109

>SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precursor (Scavenger|
           receptor expressed by endothelial cells 2 protein)
           (SREC-II) (SRECRP-1)
          Length = 866

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +1

Query: 319 GQCKMHADAHKCECNMYCLDCINGALCSQCLACH 420
           G+C      H   CN+ C   ++GA C+Q  +CH
Sbjct: 389 GRCLCSPGVHGPHCNVTCPPGLHGADCAQACSCH 422

>RDS_MOUSE (P15499) Peripherin (Retinal degeneration slow protein)|
          Length = 346

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +1

Query: 229 AGRMGGGECDEAENQRWPPWLKPLLATSFF 318
           AG++     D A+  +W PWLKP LA   F
Sbjct: 78  AGKICYDALDPAKYAKWKPWLKPYLAVCIF 107

>LAMB1_DROME (P11046) Laminin beta-1 chain precursor (Laminin B1 chain)|
          Length = 1790

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 25/94 (26%), Positives = 34/94 (36%), Gaps = 12/94 (12%)
 Frame = +1

Query: 220 TNRAGRMGGGECDEAENQRWPPWLKPLLATSFFGQCKMHADAHKCECNMYCLDC------ 381
           T+    M   EC++  N    PW KP         CK      KCECN + + C      
Sbjct: 323 THNTKGMNCEECEDFFNDL--PW-KPAFGKKT-NACK------KCECNDHAVSCHFDEAV 372

Query: 382 ------INGALCSQCLACHHGHHAIQIRRSSYHD 465
                 ++G +C  CL    G H  +     Y D
Sbjct: 373 FTASGFVSGGVCDNCLHNTRGQHCEECMPYFYRD 406

>RS4_METAC (Q8TRR1) 30S ribosomal protein S4P|
          Length = 218

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 17/65 (26%), Positives = 29/65 (44%)
 Frame = -1

Query: 386 LMQSRQYMLHSHLCASACILHCPKKLVASSGLSHGGQRWFSASSHSPPPMRPALLVLILS 207
           ++Q+RQ++ H H+  +      P  LV+     H G    S   +   P RP  +   L+
Sbjct: 126 VIQARQFITHGHIAINGRKATIPGMLVSKEDEMHIGYYGNSPLKNESHPERPVQVASFLA 185

Query: 206 SSGAS 192
            SG +
Sbjct: 186 DSGTT 190

>LAMB2_MOUSE (Q61292) Laminin beta-2 chain precursor (S-laminin) (S-LAM)|
          Length = 1799

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
 Frame = +1

Query: 244  GGECDEAENQRWP-PWLKPLLATSFFGQCKMHADAHKCECNMYCLDCINGALCSQCLACH 420
            G  CD  +  +W  P  +P +      +C  H  A    C + C D   G  C +C+A  
Sbjct: 859  GLRCDHCQRGQWGFPNCRPCVCNGRADECDTHTGA----C-LGCRDYTGGEHCERCIAGF 913

Query: 421  HG 426
            HG
Sbjct: 914  HG 915

>RHG06_MOUSE (O54834) Rho-GTPase-activating protein 6 (Rho-type|
           GTPase-activating protein RhoGAPX-1)
          Length = 986

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
 Frame = -1

Query: 395 RAPLMQSRQYMLHSHLCAS-ACILHCPKKLVASSGLSHGG-----QRWFSASSHSPPPMR 234
           R+ L +S  + L S L  S +     P  +V+SSG    G     +RW       PPP  
Sbjct: 126 RSGLKKSMAWDLPSVLAGSGSASSRSPASIVSSSGGGPNGIFSSPRRWLQQRKFQPPPNS 185

Query: 233 PALLVLILSSSGASWWNAIS 174
            +   ++  S G   WN++S
Sbjct: 186 RSHPYVVWRSEGDFTWNSMS 205

>ZSWM2_MOUSE (Q9D9X6) Zinc finger SWIM domain-containing protein 2|
          Length = 631

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
 Frame = +1

Query: 370 CLDCINGALCSQCL-ACHHGHHAI---QIRRSSYHDVIRVSEIQKVLD 501
           C +C+   LC +C  +C H  HA    + R   +  V + SE+ K L+
Sbjct: 250 CTECVEYHLCQECFDSCCHSSHAFASREKRNQRWRSVEKRSEVMKYLN 297

>RDS_HUMAN (P23942) Peripherin (Retinal degeneration slow protein)|
           (Tetraspanin-22) (Tspan-22)
          Length = 346

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1

Query: 229 AGRMGGGECDEAENQRWPPWLKPLLA 306
           AG++     D A+  RW PWLKP LA
Sbjct: 78  AGKICYDALDPAKYARWKPWLKPYLA 103

>DL_DROME (P10041) Neurogenic locus protein delta precursor|
          Length = 833

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
 Frame = +1

Query: 238 MGGGECDEAENQRWPPWLKPLLATSFFG-QCKMHAD---AHKCECNMYCLDCINGALCSQ 405
           + GG C         P  K +    F G +C+ + D    H+CE    C+D +N   C Q
Sbjct: 428 INGGSCQ--------PSGKCICPAGFSGTRCETNIDDCLGHQCENGGTCIDMVNQYRC-Q 478

Query: 406 CLACHHGHH 432
           C+   HG H
Sbjct: 479 CVPGFHGTH 487

>LTBP4_MOUSE (Q8K4G1) Latent transforming growth factor beta-binding protein 4|
           precursor (LTBP-4)
          Length = 1666

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
 Frame = +1

Query: 247 GECDEAENQR---WPPWLKPLLATSFFGQCKMHADAHKCECNMYC--LDCINGALCSQCL 411
           G C+  E       P   +P  A S   +C+   D  +CE  + C   +C+N     QC 
Sbjct: 809 GRCENTEGSFKCVCPTGFQPNAAGS---ECE---DVDECENRLACPGQECVNSPGSFQCR 862

Query: 412 ACHHGHH 432
           AC  GHH
Sbjct: 863 ACPVGHH 869

>NEUL_RAT (P42676) Neurolysin, mitochondrial precursor (EC 3.4.24.16)|
           (Neurotensin endopeptidase) (Mitochondrial
           oligopeptidase M) (Microsomal endopeptidase) (MEP)
          Length = 704

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +1

Query: 130 PLLALCCVPRLVRRTEMAFH 189
           P++  CCVP   R+ EMAFH
Sbjct: 250 PVMKKCCVPETRRKMEMAFH 269

>SREC2_MOUSE (P59222) Scavenger receptor class F member 2 precursor (Scavenger|
           receptor expressed by endothelial cells 2 protein)
           (SREC-II)
          Length = 833

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +1

Query: 319 GQCKMHADAHKCECNMYCLDCINGALCSQCLACH 420
           G+C      H   CN+ C   ++G  C+Q  +CH
Sbjct: 381 GRCLCSPGVHGPHCNVTCPAGLHGVDCAQACSCH 414

>PCSK5_RAT (P41413) Proprotein convertase subtilisin/kexin type 5 precursor|
           (EC 3.4.21.-) (Proprotein convertase PC5)
           (Subtilisin/kexin-like protease PC5) (rPC5) (PC6)
           (Fragment)
          Length = 1877

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 9/54 (16%)
 Frame = +1

Query: 334 HADAHKC-ECNMYCLDCINGALCSQCLACHHGHH--------AIQIRRSSYHDV 468
           HAD  +C +C   C  C  G+   QCL+C +G+           Q    SY D+
Sbjct: 682 HADKKRCRKCAPNCESCF-GSHADQCLSCKYGYFLNEETSSCVAQCPEGSYQDI 734

>RDS_BOVIN (P17810) Peripherin (Retinal degeneration slow protein)|
          Length = 345

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 229 AGRMGGGECDEAENQRWPPWLKPLLA 306
           AG++     D A+  +W PWLKP LA
Sbjct: 77  AGKICYDALDPAKYAKWKPWLKPYLA 102

>RCEL_RHOSH (P0C0Y8) Reaction center protein L chain (Photosynthetic reaction|
           center L subunit)
          Length = 281

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -1

Query: 467 TSWYEDLRIWMAWWPWWQARHWEQRAP 387
           T W++    W+ WW WW    W    P
Sbjct: 253 TIWFDQ---WVDWWQWWVKLPWWANIP 276

>RCEL_RHOS4 (Q3J1A5) Reaction center protein L chain (Photosynthetic reaction|
           center L subunit)
          Length = 281

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 9/27 (33%), Positives = 12/27 (44%)
 Frame = -1

Query: 467 TSWYEDLRIWMAWWPWWQARHWEQRAP 387
           T W++    W+ WW WW    W    P
Sbjct: 253 TIWFDQ---WVDWWQWWVKLPWWANIP 276

>RDS_CANFA (P52204) Peripherin (Retinal degeneration slow protein)|
          Length = 346

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 229 AGRMGGGECDEAENQRWPPWLKPLLA 306
           AG++     D A+  +W PWLKP LA
Sbjct: 78  AGKICYDALDPAKYAKWKPWLKPYLA 103


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,316,681
Number of Sequences: 219361
Number of extensions: 961547
Number of successful extensions: 4284
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 4066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4278
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4643056080
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)