ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart57g02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_470487.1| Oryza sativa (japonica cultivar-group), mRNA Length = 801 Score = 87.7 bits (44), Expect = 3e-14 Identities = 165/203 (81%), Gaps = 3/203 (1%) Strand = Plus / Plus Query: 166 gggcagtccaacatgggcggccgtggcggcgccacgtccgggaaccgctgggacggcgtg 225 |||||||||||||||||||| || ||||||||||| |||| ||| |||||||||||| Sbjct: 109 gggcagtccaacatgggcggtcgcggcggcgccaccaacggg--ccg-tgggacggcgtg 165 Query: 226 gtgccgccggagtgcgcgccgtccccgcgcacgctgcgcctgtccccgtccctccgctgg 285 ||||||||||||||||| ||||| || |||| || || ||||||| ||||| ||| Sbjct: 166 gtgccgccggagtgcgccccgtcacctcgcatcctccggttgtcccctgagctccggtgg 225 Query: 286 gaggaggcccgcgagccgctgcacgccggcgtggacgcgggcaacgtggtgggcgtgggc 345 ||||| || || ||||| || ||||||||| | |||| ||||||| | ||||||||| Sbjct: 226 gaggaagcgcgggagcccctccacgccggcatcgacgtccacaacgtgctcggcgtgggc 285 Query: 346 cccgggatgccgttcgcgcacgc 368 || |||||| | ||||| ||||| Sbjct: 286 ccggggatgtccttcgcccacgc 308 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 412 ctcgtcccctgcgcgcagggcggcacccccatcgccaactggtcccgcggctccgagctg 471 |||||||||||||| ||||| ||||| ||||||||||||||| || | ||| | |||||| Sbjct: 346 ctcgtcccctgcgcccagggaggcacgcccatcgccaactggaccaggggcacggagctg 405 Query: 472 tacgaccggatggt 485 ||||| |||||||| Sbjct: 406 tacgagcggatggt 419
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 87.7 bits (44), Expect = 3e-14 Identities = 165/203 (81%), Gaps = 3/203 (1%) Strand = Plus / Plus Query: 166 gggcagtccaacatgggcggccgtggcggcgccacgtccgggaaccgctgggacggcgtg 225 |||||||||||||||||||| || ||||||||||| |||| ||| |||||||||||| Sbjct: 35885631 gggcagtccaacatgggcggtcgcggcggcgccaccaacggg--ccg-tgggacggcgtg 35885687 Query: 226 gtgccgccggagtgcgcgccgtccccgcgcacgctgcgcctgtccccgtccctccgctgg 285 ||||||||||||||||| ||||| || |||| || || ||||||| ||||| ||| Sbjct: 35885688 gtgccgccggagtgcgccccgtcacctcgcatcctccggttgtcccctgagctccggtgg 35885747 Query: 286 gaggaggcccgcgagccgctgcacgccggcgtggacgcgggcaacgtggtgggcgtgggc 345 ||||| || || ||||| || ||||||||| | |||| ||||||| | ||||||||| Sbjct: 35885748 gaggaagcgcgggagcccctccacgccggcatcgacgtccacaacgtgctcggcgtgggc 35885807 Query: 346 cccgggatgccgttcgcgcacgc 368 || |||||| | ||||| ||||| Sbjct: 35885808 ccggggatgtccttcgcccacgc 35885830 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 412 ctcgtcccctgcgcgcagggcggcacccccatcgccaactggtcccgcggctccgagctg 471 |||||||||||||| ||||| ||||| ||||||||||||||| || | ||| | |||||| Sbjct: 35885868 ctcgtcccctgcgcccagggaggcacgcccatcgccaactggaccaggggcacggagctg 35885927 Query: 472 tacgaccggatggt 485 ||||| |||||||| Sbjct: 35885928 tacgagcggatggt 35885941 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 149 tggtgttcatcctggcggggcagtccaacatgg 181 ||||||||||||||| |||||||| ||||||| Sbjct: 35882391 tggtgttcatcctgggagggcagtcgaacatgg 35882359 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 277 ctccgctgggaggaggcccgcgagccgct 305 ||||| ||||||||||||| ||||||||| Sbjct: 35882266 ctccgatgggaggaggcccacgagccgct 35882238 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 cacccgcgcccgcgtcgccg 505 |||||||||||||||||||| Sbjct: 35238907 cacccgcgcccgcgtcgccg 35238888 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 499 gtcgccggcgccggcaccggcacc 522 ||||||||||||||| |||||||| Sbjct: 31122220 gtcgccggcgccggcgccggcacc 31122243
>gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genomic sequence, complete sequence Length = 145115 Score = 87.7 bits (44), Expect = 3e-14 Identities = 165/203 (81%), Gaps = 3/203 (1%) Strand = Plus / Minus Query: 166 gggcagtccaacatgggcggccgtggcggcgccacgtccgggaaccgctgggacggcgtg 225 |||||||||||||||||||| || ||||||||||| |||| ||| |||||||||||| Sbjct: 75494 gggcagtccaacatgggcggtcgcggcggcgccaccaacggg--ccg-tgggacggcgtg 75438 Query: 226 gtgccgccggagtgcgcgccgtccccgcgcacgctgcgcctgtccccgtccctccgctgg 285 ||||||||||||||||| ||||| || |||| || || ||||||| ||||| ||| Sbjct: 75437 gtgccgccggagtgcgccccgtcacctcgcatcctccggttgtcccctgagctccggtgg 75378 Query: 286 gaggaggcccgcgagccgctgcacgccggcgtggacgcgggcaacgtggtgggcgtgggc 345 ||||| || || ||||| || ||||||||| | |||| ||||||| | ||||||||| Sbjct: 75377 gaggaagcgcgggagcccctccacgccggcatcgacgtccacaacgtgctcggcgtgggc 75318 Query: 346 cccgggatgccgttcgcgcacgc 368 || |||||| | ||||| ||||| Sbjct: 75317 ccggggatgtccttcgcccacgc 75295 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 412 ctcgtcccctgcgcgcagggcggcacccccatcgccaactggtcccgcggctccgagctg 471 |||||||||||||| ||||| ||||| ||||||||||||||| || | ||| | |||||| Sbjct: 75257 ctcgtcccctgcgcccagggaggcacgcccatcgccaactggaccaggggcacggagctg 75198 Query: 472 tacgaccggatggt 485 ||||| |||||||| Sbjct: 75197 tacgagcggatggt 75184 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 277 ctccgctgggaggaggcccgcgagccgct 305 ||||| ||||||||||||| ||||||||| Sbjct: 78859 ctccgatgggaggaggcccacgagccgct 78887 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 149 tggtgttcatcctggcggggcagtccaacatgg 181 ||||||||||||||| |||||||| ||||||| Sbjct: 78734 tggtgttcatcctgggagggcagtcgaacatgg 78766
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 87.7 bits (44), Expect = 3e-14 Identities = 165/203 (81%), Gaps = 3/203 (1%) Strand = Plus / Plus Query: 166 gggcagtccaacatgggcggccgtggcggcgccacgtccgggaaccgctgggacggcgtg 225 |||||||||||||||||||| || ||||||||||| |||| ||| |||||||||||| Sbjct: 35975761 gggcagtccaacatgggcggtcgcggcggcgccaccaacggg--ccg-tgggacggcgtg 35975817 Query: 226 gtgccgccggagtgcgcgccgtccccgcgcacgctgcgcctgtccccgtccctccgctgg 285 ||||||||||||||||| ||||| || |||| || || ||||||| ||||| ||| Sbjct: 35975818 gtgccgccggagtgcgccccgtcacctcgcatcctccggttgtcccctgagctccggtgg 35975877 Query: 286 gaggaggcccgcgagccgctgcacgccggcgtggacgcgggcaacgtggtgggcgtgggc 345 ||||| || || ||||| || ||||||||| | |||| ||||||| | ||||||||| Sbjct: 35975878 gaggaagcgcgggagcccctccacgccggcatcgacgtccacaacgtgctcggcgtgggc 35975937 Query: 346 cccgggatgccgttcgcgcacgc 368 || |||||| | ||||| ||||| Sbjct: 35975938 ccggggatgtccttcgcccacgc 35975960 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 412 ctcgtcccctgcgcgcagggcggcacccccatcgccaactggtcccgcggctccgagctg 471 |||||||||||||| ||||| ||||| ||||||||||||||| || | ||| | |||||| Sbjct: 35975998 ctcgtcccctgcgcccagggaggcacgcccatcgccaactggaccaggggcacggagctg 35976057 Query: 472 tacgaccggatggt 485 ||||| |||||||| Sbjct: 35976058 tacgagcggatggt 35976071 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Minus Query: 149 tggtgttcatcctggcggggcagtccaacatgg 181 ||||||||||||||| |||||||| ||||||| Sbjct: 35972521 tggtgttcatcctgggagggcagtcgaacatgg 35972489 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 277 ctccgctgggaggaggcccgcgagccgct 305 ||||| ||||||||||||| ||||||||| Sbjct: 35972396 ctccgatgggaggaggcccacgagccgct 35972368 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 cacccgcgcccgcgtcgccg 505 |||||||||||||||||||| Sbjct: 35328979 cacccgcgcccgcgtcgccg 35328960 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 499 gtcgccggcgccggcaccggcacc 522 ||||||||||||||| |||||||| Sbjct: 31212743 gtcgccggcgccggcgccggcacc 31212766
>dbj|AK100733.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023117O12, full insert sequence Length = 1119 Score = 87.7 bits (44), Expect = 3e-14 Identities = 165/203 (81%), Gaps = 3/203 (1%) Strand = Plus / Plus Query: 166 gggcagtccaacatgggcggccgtggcggcgccacgtccgggaaccgctgggacggcgtg 225 |||||||||||||||||||| || ||||||||||| |||| ||| |||||||||||| Sbjct: 258 gggcagtccaacatgggcggtcgcggcggcgccaccaacggg--ccg-tgggacggcgtg 314 Query: 226 gtgccgccggagtgcgcgccgtccccgcgcacgctgcgcctgtccccgtccctccgctgg 285 ||||||||||||||||| ||||| || |||| || || ||||||| ||||| ||| Sbjct: 315 gtgccgccggagtgcgccccgtcacctcgcatcctccggttgtcccctgagctccggtgg 374 Query: 286 gaggaggcccgcgagccgctgcacgccggcgtggacgcgggcaacgtggtgggcgtgggc 345 ||||| || || ||||| || ||||||||| | |||| ||||||| | ||||||||| Sbjct: 375 gaggaagcgcgggagcccctccacgccggcatcgacgtccacaacgtgctcggcgtgggc 434 Query: 346 cccgggatgccgttcgcgcacgc 368 || |||||| | ||||| ||||| Sbjct: 435 ccggggatgtccttcgcccacgc 457 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 412 ctcgtcccctgcgcgcagggcggcacccccatcgccaactggtcccgcggctccgagctg 471 |||||||||||||| ||||| ||||| ||||||||||||||| || | ||| | |||||| Sbjct: 495 ctcgtcccctgcgcccagggaggcacgcccatcgccaactggaccaggggcacggagctg 554 Query: 472 tacgaccggatggt 485 ||||| |||||||| Sbjct: 555 tacgagcggatggt 568
>dbj|AK061073.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-D05, full insert sequence Length = 1106 Score = 87.7 bits (44), Expect = 3e-14 Identities = 165/203 (81%), Gaps = 3/203 (1%) Strand = Plus / Plus Query: 166 gggcagtccaacatgggcggccgtggcggcgccacgtccgggaaccgctgggacggcgtg 225 |||||||||||||||||||| || ||||||||||| |||| ||| |||||||||||| Sbjct: 259 gggcagtccaacatgggcggtcgcggcggcgccaccaacggg--ccg-tgggacggcgtg 315 Query: 226 gtgccgccggagtgcgcgccgtccccgcgcacgctgcgcctgtccccgtccctccgctgg 285 ||||||||||||||||| ||||| || |||| || || ||||||| ||||| ||| Sbjct: 316 gtgccgccggagtgcgccccgtcacctcgcatcctccggttgtcccctgagctccggtgg 375 Query: 286 gaggaggcccgcgagccgctgcacgccggcgtggacgcgggcaacgtggtgggcgtgggc 345 ||||| || || ||||| || ||||||||| | |||| ||||||| | ||||||||| Sbjct: 376 gaggaagcgcgggagcccctccacgccggcatcgacgtccacaacgtgctcggcgtgggc 435 Query: 346 cccgggatgccgttcgcgcacgc 368 || |||||| | ||||| ||||| Sbjct: 436 ccggggatgtccttcgcccacgc 458 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 412 ctcgtcccctgcgcgcagggcggcacccccatcgccaactggtcccgcggctccgagctg 471 |||||||||||||| ||||| ||||| ||||||||||||||| || | ||| | |||||| Sbjct: 496 ctcgtcccctgcgcccagggaggcacgcccatcgccaactggaccaggggcacggagctg 555 Query: 472 tacgaccggatggt 485 ||||| |||||||| Sbjct: 556 tacgagcggatggt 569
>emb|AL731585.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009K15, complete sequence Length = 185021 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 211 cgctgggacggcgtggtgccgccggagtgcgcgccgt 247 |||||||||||||| |||||||||||||||||||||| Sbjct: 59849 cgctgggacggcgtcgtgccgccggagtgcgcgccgt 59813
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 211 cgctgggacggcgtggtgccgccggagtgcgcgccgt 247 |||||||||||||| |||||||||||||||||||||| Sbjct: 11738393 cgctgggacggcgtcgtgccgccggagtgcgcgccgt 11738357 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 489 ccgcgcccgcgtcgccggcgccggc 513 ||||| ||||||||||||||||||| Sbjct: 30640555 ccgcggccgcgtcgccggcgccggc 30640579 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 496 cgcgtcgccggcgccggcaccggca 520 |||||||||||||||||| |||||| Sbjct: 14830720 cgcgtcgccggcgccggcgccggca 14830696 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 gccagcggcggcgacgacca 79 |||||||||||||||||||| Sbjct: 20199077 gccagcggcggcgacgacca 20199058
>dbj|AK068009.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129H13, full insert sequence Length = 1112 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 211 cgctgggacggcgtggtgccgccggagtgcgcgccgt 247 |||||||||||||| |||||||||||||||||||||| Sbjct: 115 cgctgggacggcgtcgtgccgccggagtgcgcgccgt 151
>ref|XM_322330.1| Neurospora crassa OR74A predicted protein (NCU00245.1) partial mRNA Length = 828 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 500 tcgccggcgccggcaccggcac 521 |||||||||||||||||||||| Sbjct: 727 tcgccggcgccggcaccggcac 706
>ref|XM_952623.1| Neurospora crassa OR74A hypothetical protein (NCU00245.1) partial mRNA Length = 828 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 500 tcgccggcgccggcaccggcac 521 |||||||||||||||||||||| Sbjct: 727 tcgccggcgccggcaccggcac 706
>gb|AY103574.1| Zea mays PCO069490 mRNA sequence Length = 678 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 501 cgccggcgccggcaccggcacc 522 |||||||||||||||||||||| Sbjct: 282 cgccggcgccggcaccggcacc 303
>gb|AF079138.1|AF079138 Streptomyces venezuelae methymycin/pikromycin polyketide synthase gene cluster, complete sequence Length = 37948 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 501 cgccggcgccggcaccggcacc 522 |||||||||||||||||||||| Sbjct: 10700 cgccggcgccggcaccggcacc 10679
>ref|XM_482293.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1494 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 496 cgcgtcgccggcgccggcaccggca 520 |||||||||||||||||| |||||| Sbjct: 396 cgcgtcgccggcgccggcgccggca 372
>gb|AY365053.1| Ralstonia eutropha JMP134 plasmid pJP4, complete sequence Length = 87688 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 tgcttctgctgctcgcgtcgg 103 ||||||||||||||||||||| Sbjct: 67743 tgcttctgctgctcgcgtcgg 67763
>ref|XM_471830.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1428 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 496 cgcgtcgccggcgccggcaccggca 520 |||||||||||||||||| |||||| Sbjct: 396 cgcgtcgccggcgccggcgccggca 372
>ref|XM_470485.1| Oryza sativa (japonica cultivar-group), mRNA Length = 903 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 277 ctccgctgggaggaggcccgcgagccgct 305 ||||| ||||||||||||| ||||||||| Sbjct: 202 ctccgatgggaggaggcccacgagccgct 230 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 149 tggtgttcatcctggcggggcagtccaacatgg 181 ||||||||||||||| |||||||| ||||||| Sbjct: 77 tggtgttcatcctgggagggcagtcgaacatgg 109
>ref|XM_473802.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1005 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 489 ccgcgcccgcgtcgccggcgccggc 513 ||||| ||||||||||||||||||| Sbjct: 285 ccgcggccgcgtcgccggcgccggc 261
>gb|AF311437.2|AH010657S2 Comamonas testosteroni plasmid pTSA incP1beta region, partial sequence and transposon Tntsa, complete sequence Length = 38756 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 tgcttctgctgctcgcgtcgg 103 ||||||||||||||||||||| Sbjct: 12400 tgcttctgctgctcgcgtcgg 12420
>gb|AE009157.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 183 of 256 of the complete sequence Length = 10579 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 500 tcgccggcgccggcaccggca 520 ||||||||||||||||||||| Sbjct: 935 tcgccggcgccggcaccggca 955
>gb|CP000358.1| Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence Length = 574126 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 486 cacccgcgcccgcgtcgccggcgcc 510 ||||||||||||||||||| ||||| Sbjct: 283985 cacccgcgcccgcgtcgcctgcgcc 283961
>emb|AJ863570.1| IncP-1beta multiresistance plasmid pB8 Length = 57198 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 tgcttctgctgctcgcgtcgg 103 ||||||||||||||||||||| Sbjct: 21134 tgcttctgctgctcgcgtcgg 21154
>emb|AL591789.1|SME591789 Sinorhizobium meliloti 1021 complete chromosome; segment 8/12 Length = 294800 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 500 tcgccggcgccggcaccggca 520 ||||||||||||||||||||| Sbjct: 219443 tcgccggcgccggcaccggca 219463
>gb|AC117186.3| Mus musculus BAC clone RP23-37O6 from 1, complete sequence Length = 172780 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 tgtccccgtccctccgctggg 286 ||||||||||||||||||||| Sbjct: 64177 tgtccccgtccctccgctggg 64157
>gb|AC137693.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OJ1111_B01, complete sequence Length = 136068 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 397 ggcgccgtcgtggggctcgtc 417 ||||||||||||||||||||| Sbjct: 77723 ggcgccgtcgtggggctcgtc 77743
>emb|Z86064.2|HS435D1 Human DNA sequence from clone RP3-435D1 on chromosome Xq25 Contains the 3' end of the HS6ST2 gene for heparan sulfate 6-O-sulfotransferase 2, a novel gene and the 3' end of a novel gene, complete sequence Length = 184975 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 2 cctccaccaagtgagcagagcacctagct 30 ||||||||| |||||||||||||||||| Sbjct: 180472 cctccaccagctgagcagagcacctagct 180500
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 500 tcgccggcgccggcaccggca 520 ||||||||||||||||||||| Sbjct: 3733859 tcgccggcgccggcaccggca 3733879 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 cacccgcgcccgcgtcgccg 505 |||||||||||||||||||| Sbjct: 4566397 cacccgcgcccgcgtcgccg 4566378
>gb|CP000093.1| Ralstonia eutropha JMP134 plasmid 1, complete sequence Length = 87688 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 tgcttctgctgctcgcgtcgg 103 ||||||||||||||||||||| Sbjct: 67743 tgcttctgctgctcgcgtcgg 67763
>gb|U66917.2| Pseudomonas sp. ADP atrazine catabolic plasmid pADP-1, complete sequence Length = 108845 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 tgcttctgctgctcgcgtcgg 103 ||||||||||||||||||||| Sbjct: 78711 tgcttctgctgctcgcgtcgg 78691
>emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete genome; segment 14/16 Length = 346287 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 299 agccgctgcacgccggcgtggacgcgggcaacg 331 ||||||||||||||||| ||| |||| |||||| Sbjct: 92859 agccgctgcacgccggcctggccgcgcgcaacg 92891
>emb|BX640435.1| Bordetella parapertussis strain 12822, complete genome; segment 13/14 Length = 346259 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 299 agccgctgcacgccggcgtggacgcgggcaacg 331 ||||||||||||||||| ||| |||| |||||| Sbjct: 12114 agccgctgcacgccggcctggccgcgcgcaacg 12146
>emb|BX640420.1| Bordetella pertussis strain Tohama I, complete genome; segment 10/12 Length = 348134 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 299 agccgctgcacgccggcgtggacgcgggcaacg 331 ||||||||||||||||| ||| |||| |||||| Sbjct: 259964 agccgctgcacgccggcctggccgcgcgcaacg 259996
>emb|BX572604.1| Rhodopseudomonas palustris CGA009 complete genome; segment 12/16 Length = 348068 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 489 ccgcgcccgcgtcgccggcgccggc 513 ||||||||||| ||||||||||||| Sbjct: 42369 ccgcgcccgcggcgccggcgccggc 42345
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 489 ccgcgcccgcgtcgccggcgccggc 513 ||||| ||||||||||||||||||| Sbjct: 116263 ccgcggccgcgtcgccggcgccggc 116287
>emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035M09, complete sequence Length = 152732 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 489 ccgcgcccgcgtcgccggcgccggc 513 ||||| ||||||||||||||||||| Sbjct: 44286 ccgcggccgcgtcgccggcgccggc 44310
>emb|AJ639924.1| Plasmid pB3 complete genome Length = 56167 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 tgcttctgctgctcgcgtcgg 103 ||||||||||||||||||||| Sbjct: 13385 tgcttctgctgctcgcgtcgg 13405
>emb|AJ564903.1|UBA564903 Uncultured bacterium IncP-1beta multiresistance plasmid pB10 Length = 64508 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 tgcttctgctgctcgcgtcgg 103 ||||||||||||||||||||| Sbjct: 10269 tgcttctgctgctcgcgtcgg 10289
>gb|U67194.4|EAU67194 Enterobacter aerogenes plasmid R751, complete sequence Length = 53423 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 tgcttctgctgctcgcgtcgg 103 ||||||||||||||||||||| Sbjct: 27119 tgcttctgctgctcgcgtcgg 27139
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 249 cccgcgcacgctgcgcctgtc 269 ||||||||||||||||||||| Sbjct: 4161316 cccgcgcacgctgcgcctgtc 4161336 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 gcgtcggccgtggccgtgagcgcg 120 ||||||||||||||||| |||||| Sbjct: 469709 gcgtcggccgtggccgtcagcgcg 469732
>dbj|AB063332.1| Delftia acidovorans plasmid pUO1 DNA, complete sequence Length = 67066 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 tgcttctgctgctcgcgtcgg 103 ||||||||||||||||||||| Sbjct: 28824 tgcttctgctgctcgcgtcgg 28844
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 500 tcgccggcgccggcaccggca 520 ||||||||||||||||||||| Sbjct: 2019762 tcgccggcgccggcaccggca 2019782
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 502 gccggcgccggcaccggcacc 522 ||||||||||||||||||||| Sbjct: 535 gccggcgccggcaccggcacc 555 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 502 gccggcgccggcaccggcacc 522 ||||||||||||||||||||| Sbjct: 546 gccggcgccggcaccggcacc 526
>gb|AC109644.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0459F09, complete sequence Length = 143533 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 397 ggcgccgtcgtggggctcgtc 417 ||||||||||||||||||||| Sbjct: 22691 ggcgccgtcgtggggctcgtc 22711
>gb|AC144559.1| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0459F09, complete sequence Length = 143533 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 397 ggcgccgtcgtggggctcgtc 417 ||||||||||||||||||||| Sbjct: 22691 ggcgccgtcgtggggctcgtc 22711
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 500 tcgccggcgccggcaccggca 520 ||||||||||||||||||||| Sbjct: 21734282 tcgccggcgccggcaccggca 21734262
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 397 ggcgccgtcgtggggctcgtc 417 ||||||||||||||||||||| Sbjct: 20413516 ggcgccgtcgtggggctcgtc 20413496 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 ccggcgccggcaccggcacc 522 |||||||||||||||||||| Sbjct: 14751668 ccggcgccggcaccggcacc 14751649
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 496 cgcgtcgccggcgccggcaccggca 520 |||||||||||||||||| |||||| Sbjct: 19285975 cgcgtcgccggcgccggcgccggca 19285951
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 149 tggtgttcatcctggcggggcagtccaacatgg 181 ||||||||||||||| |||||||| ||||||| Sbjct: 30584285 tggtgttcatcctgggcgggcagtcgaacatgg 30584317 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 490 cgcgcccgcgtcgccggcgccggc 513 |||| ||||||||||||||||||| Sbjct: 2496911 cgcggccgcgtcgccggcgccggc 2496934
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 atgggcggccgtggcggcgcc 198 ||||||||||||||||||||| Sbjct: 14089349 atgggcggccgtggcggcgcc 14089369
>emb|AL663021.4|OSJN00218 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041M06, complete sequence Length = 107014 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 496 cgcgtcgccggcgccggcaccggca 520 |||||||||||||||||| |||||| Sbjct: 84658 cgcgtcgccggcgccggcgccggca 84634
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 gaccatcctgcttctgctgct 95 ||||||||||||||||||||| Sbjct: 1316932 gaccatcctgcttctgctgct 1316912 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 gaggcccgcgagccgctgca 308 |||||||||||||||||||| Sbjct: 2915542 gaggcccgcgagccgctgca 2915561
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 489 ccgcgcccgcgtcgccggcgc 509 ||||||||||||||||||||| Sbjct: 2837104 ccgcgcccgcgtcgccggcgc 2837124 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 ggacggcgtggtgccgccgg 235 |||||||||||||||||||| Sbjct: 4898234 ggacggcgtggtgccgccgg 4898253 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 146 cgctggtgttcatcctggcg 165 |||||||||||||||||||| Sbjct: 4340652 cgctggtgttcatcctggcg 4340671 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 ccggcgccggcaccggcacc 522 |||||||||||||||||||| Sbjct: 3210647 ccggcgccggcaccggcacc 3210628 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 gcacgccggcgtggacgcgg 325 |||||||||||||||||||| Sbjct: 1203492 gcacgccggcgtggacgcgg 1203511
>dbj|AP005750.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0069C14 Length = 150579 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 149 tggtgttcatcctggcggggcagtccaacatgg 181 ||||||||||||||| |||||||| ||||||| Sbjct: 82848 tggtgttcatcctgggcgggcagtcgaacatgg 82880
>dbj|AP003369.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1102E12 Length = 155692 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 178 atgggcggccgtggcggcgcc 198 ||||||||||||||||||||| Sbjct: 29063 atgggcggccgtggcggcgcc 29083
>dbj|AK119841.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-178-C10, full insert sequence Length = 2363 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 492 cgcccgcgtcgccggcgccgg 512 ||||||||||||||||||||| Sbjct: 2172 cgcccgcgtcgccggcgccgg 2192
>dbj|AP004636.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0685B10 Length = 148544 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 496 cgcgtcgccggcgccggcaccggca 520 |||||||||||||||||| |||||| Sbjct: 15418 cgcgtcgccggcgccggcgccggca 15394
>dbj|AP003872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_A03 Length = 109873 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 496 cgcgtcgccggcgccggcaccggca 520 |||||||||||||||||| |||||| Sbjct: 58988 cgcgtcgccggcgccggcgccggca 58964
>dbj|AK072880.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023146D23, full insert sequence Length = 898 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 277 ctccgctgggaggaggcccgcgagccgct 305 ||||| ||||||||||||| ||||||||| Sbjct: 183 ctccgatgggaggaggcccacgagccgct 211 Score = 42.1 bits (21), Expect = 1.8 Identities = 30/33 (90%) Strand = Plus / Plus Query: 149 tggtgttcatcctggcggggcagtccaacatgg 181 ||||||||||||||| |||||||| ||||||| Sbjct: 58 tggtgttcatcctgggagggcagtcgaacatgg 90
>dbj|AK071210.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023085L01, full insert sequence Length = 737 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 500 tcgccggcgccggcaccggca 520 ||||||||||||||||||||| Sbjct: 528 tcgccggcgccggcaccggca 508
>dbj|AK069047.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009C11, full insert sequence Length = 996 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 500 tcgccggcgccggcaccggca 520 ||||||||||||||||||||| Sbjct: 532 tcgccggcgccggcaccggca 512
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 397 ggcgccgtcgtggggctcgtc 417 ||||||||||||||||||||| Sbjct: 20723750 ggcgccgtcgtggggctcgtc 20723730 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 ccggcgccggcaccggcacc 522 |||||||||||||||||||| Sbjct: 14832105 ccggcgccggcaccggcacc 14832086
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 500 tcgccggcgccggcaccggca 520 ||||||||||||||||||||| Sbjct: 21662627 tcgccggcgccggcaccggca 21662607
>emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa0024C08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 186030 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 500 tcgccggcgccggcaccggca 520 ||||||||||||||||||||| Sbjct: 78269 tcgccggcgccggcaccggca 78289
>gb|AC140214.3| Mus musculus BAC clone RP23-479G14 from 1, complete sequence Length = 194229 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 tgtccccgtccctccgctggg 286 ||||||||||||||||||||| Sbjct: 134343 tgtccccgtccctccgctggg 134323
>emb|AM048832.1| Uncultured bacterium mercury resistance plasmid pTP6 Length = 54344 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 tgcttctgctgctcgcgtcgg 103 ||||||||||||||||||||| Sbjct: 22430 tgcttctgctgctcgcgtcgg 22450
>gb|DQ065837.1| Burkholderia cepacia strain 2a plasmid pIJB1, complete sequence Length = 99448 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 tgcttctgctgctcgcgtcgg 103 ||||||||||||||||||||| Sbjct: 19267 tgcttctgctgctcgcgtcgg 19287
>ref|XM_469848.1| Oryza sativa (japonica cultivar-group), mRNA Length = 954 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 499 gtcgccggcgccggcaccggcacc 522 ||||||||||||||| |||||||| Sbjct: 769 gtcgccggcgccggcgccggcacc 792
>ref|NM_196760.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0068N06.16), mRNA Length = 222 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 496 cgcgtcgccggcgccggcaccggc 519 |||||||||||||||||| ||||| Sbjct: 166 cgcgtcgccggcgccggcgccggc 189
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 503 ccggcgccggcaccggcacc 522 |||||||||||||||||||| Sbjct: 2440517 ccggcgccggcaccggcacc 2440498
>ref|XM_526693.1| PREDICTED: Pan troglodytes similar to KIAA1816 protein (LOC471311), mRNA Length = 861 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 501 cgccggcgccggcaccggca 520 |||||||||||||||||||| Sbjct: 636 cgccggcgccggcaccggca 655
>ref|XM_478402.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3132 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 489 ccgcgcccgcgtcgccggcgccgg 512 |||||| ||||||||||||||||| Sbjct: 35 ccgcgctcgcgtcgccggcgccgg 58
>gb|AC145325.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0034E03 map near 50283S, complete sequence Length = 134074 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 503 ccggcgccggcaccggcacc 522 |||||||||||||||||||| Sbjct: 75392 ccggcgccggcaccggcacc 75411
>gb|AC134341.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0027N19, complete sequence Length = 141368 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 496 cgcgtcgccggcgccggcaccggc 519 |||||||||||||||||| ||||| Sbjct: 33128 cgcgtcgccggcgccggcgccggc 33151
>gb|AC124144.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0099P06, complete sequence Length = 135117 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 496 cgcgtcgccggcgccggcaccggc 519 |||||||||||||||||| ||||| Sbjct: 134545 cgcgtcgccggcgccggcgccggc 134568
>gb|AY312363.1| Gallus gallus cHz-cadherin mRNA, complete cds Length = 8460 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 gtgcgcgccgtccccgcgca 256 |||||||||||||||||||| Sbjct: 204 gtgcgcgccgtccccgcgca 185
>gb|AC073138.3| Homo sapiens BAC clone RP11-708P17 from 7, complete sequence Length = 118396 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 cacgctgcgcctgtccccgt 274 |||||||||||||||||||| Sbjct: 36902 cacgctgcgcctgtccccgt 36883
>gb|AC092852.6| Oryza sativa chromosome 3 BAC OSJNBa0032G11 genomic sequence, complete sequence Length = 156606 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 cacccgcgcccgcgtcgccg 505 |||||||||||||||||||| Sbjct: 117668 cacccgcgcccgcgtcgccg 117649
>ref|XM_755485.1| Ustilago maydis 521 hypothetical protein (UM04431.1) partial mRNA Length = 5223 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tggagccagcggcggcgacg 75 |||||||||||||||||||| Sbjct: 562 tggagccagcggcggcgacg 543
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 359 tcgcgcacgcgctgctccgg 378 |||||||||||||||||||| Sbjct: 1875826 tcgcgcacgcgctgctccgg 1875845
>gb|AC002990.1|HUAC002990 Human Chromosome 16 BAC clone CIT987SK-A-1000D7, complete sequence Length = 106760 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 gtgagcagagcacctagcta 31 |||||||||||||||||||| Sbjct: 25134 gtgagcagagcacctagcta 25153
>emb|AJ786317.1| Streptomyces fradiae putative neomycin biosynthetic gene cluster, strain ATCC 10745 Length = 42149 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 ccgcgcccgcgtcgccggcg 508 |||||||||||||||||||| Sbjct: 29903 ccgcgcccgcgtcgccggcg 29922
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 97 gcgtcggccgtggccgtgagcgcg 120 |||||||| ||||||||||||||| Sbjct: 185334 gcgtcggcggtggccgtgagcgcg 185357
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 289 gaggcccgcgagccgctgcacgccggcg 316 |||||| ||||| ||||||||||||||| Sbjct: 1633964 gaggccggcgaggcgctgcacgccggcg 1633991
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 cccgcgcccgcgtcgccggc 507 |||||||||||||||||||| Sbjct: 1185348 cccgcgcccgcgtcgccggc 1185367
>emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genome; segment 1/16 Length = 349315 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gggcggccgtggcggcgcca 199 |||||||||||||||||||| Sbjct: 126119 gggcggccgtggcggcgcca 126138
>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29 Length = 293050 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 499 gtcgccggcgccggcaccgg 518 |||||||||||||||||||| Sbjct: 16634 gtcgccggcgccggcaccgg 16615
>ref|NM_001001754.1| Gallus gallus cHz-cadherin (LOC414835), mRNA Length = 8460 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 gtgcgcgccgtccccgcgca 256 |||||||||||||||||||| Sbjct: 204 gtgcgcgccgtccccgcgca 185
>gb|AC151616.2| Emiliania huxleyi clone JGIACCU-13M1, complete sequence Length = 36906 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 492 cgcccgcgtcgccggcgccggcaccggc 519 ||||||| ||||||||||||||||||| Sbjct: 12381 cgcccgccccgccggcgccggcaccggc 12408
>gb|AC087543.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0068N06, complete sequence Length = 174019 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 496 cgcgtcgccggcgccggcaccggc 519 |||||||||||||||||| ||||| Sbjct: 37737 cgcgtcgccggcgccggcgccggc 37760
>emb|CR594740.1| full-length cDNA clone CS0DI004YL21 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1783 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 gggggcgcggagagggcgcc 143 |||||||||||||||||||| Sbjct: 5 gggggcgcggagagggcgcc 24
>dbj|AB224689.1| Aspergillus oryzae cDNA, contig sequence: AoEST1538 Length = 804 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 tcctgcttctgctgctcgcg 99 |||||||||||||||||||| Sbjct: 351 tcctgcttctgctgctcgcg 332
>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence Length = 642517 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 501 cgccggcgccggcaccggca 520 |||||||||||||||||||| Sbjct: 419400 cgccggcgccggcaccggca 419381
>gb|AC027004.15| Homo sapiens chromosome 15, clone RP11-143C19, complete sequence Length = 181804 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 accatcctgcttctgctgct 95 |||||||||||||||||||| Sbjct: 89944 accatcctgcttctgctgct 89925
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 tcctgcttctgctgctcgcg 99 |||||||||||||||||||| Sbjct: 2695481 tcctgcttctgctgctcgcg 2695500
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gggcaacgtggtgggcgtgg 343 |||||||||||||||||||| Sbjct: 1687010 gggcaacgtggtgggcgtgg 1686991
>gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genomic sequence, complete sequence Length = 128017 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 499 gtcgccggcgccggcaccggcacc 522 ||||||||||||||| |||||||| Sbjct: 42861 gtcgccggcgccggcgccggcacc 42884
>gb|U60315.1|MCU60315 Molluscum contagiosum virus subtype 1, complete genome Length = 190289 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 295 cgcgagccgctgcacgccggcgtg 318 ||||||||||||||||| |||||| Sbjct: 100367 cgcgagccgctgcacgcgggcgtg 100344
>gb|U86915.1|MCU86915 Molluscum contagiosum virus subtype 1 clone B2-24b homolog of vaccinia H3L (B2-24b) gene, partial cds Length = 519 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 295 cgcgagccgctgcacgccggcgtg 318 ||||||||||||||||| |||||| Sbjct: 510 cgcgagccgctgcacgcgggcgtg 487
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gggcggccgtggcggcgcca 199 |||||||||||||||||||| Sbjct: 444641 gggcggccgtggcggcgcca 444660
>gb|AC008686.8| Homo sapiens chromosome 19 clone CTB-5E10, complete sequence Length = 150192 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 gggggcgcggagagggcgcc 143 |||||||||||||||||||| Sbjct: 109901 gggggcgcggagagggcgcc 109920
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 496 cgcgtcgccggcgccggcaccggc 519 |||||||||||||||||| ||||| Sbjct: 15866213 cgcgtcgccggcgccggcgccggc 15866236
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 489 ccgcgcccgcgtcgccggcgccgg 512 |||||| ||||||||||||||||| Sbjct: 19708875 ccgcgctcgcgtcgccggcgccgg 19708898 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 cacccgcgcccgcgtcgccg 505 |||||||||||||||||||| Sbjct: 16373714 cacccgcgcccgcgtcgccg 16373733
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 496 cgcgtcgccggcgccggcaccggc 519 |||||||||||||||||| ||||| Sbjct: 3712198 cgcgtcgccggcgccggcgccggc 3712221
>gb|AC134300.3| Homo sapiens chromosome 16 clone CTC-496I23, complete sequence Length = 171048 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 gtgagcagagcacctagcta 31 |||||||||||||||||||| Sbjct: 5785 gtgagcagagcacctagcta 5766
>gb|AE004655.1| Pseudomonas aeruginosa PAO1, section 216 of 529 of the complete genome Length = 10829 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 284 gggaggaggcccgcgagccgctgc 307 ||||||||||| |||||||||||| Sbjct: 2375 gggaggaggccggcgagccgctgc 2352
>gb|AF154645.1| Nicotiana tabacum clone PR26 mRNA sequence Length = 1141 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 499 gtcgccggcgccggcaccggcacc 522 ||||||||| |||||||||||||| Sbjct: 88 gtcgccggcaccggcaccggcacc 111
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 490 cgcgcccgcgtcgccggcgccggc 513 |||||||||| ||||||||||||| Sbjct: 901918 cgcgcccgcgccgccggcgccggc 901941
>dbj|AP005448.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0404G11 Length = 167623 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 cacccgcgcccgcgtcgccg 505 |||||||||||||||||||| Sbjct: 14505 cacccgcgcccgcgtcgccg 14524
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 485 tcacccgcgcccgcgtcgccggcg 508 |||||||||||||| ||||||||| Sbjct: 6112266 tcacccgcgcccgcctcgccggcg 6112289 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 225 ggtgccgccggagtgcgcgccgtc 248 ||||||||||||| |||||||||| Sbjct: 786846 ggtgccgccggagcgcgcgccgtc 786869
>dbj|AP003767.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0036F10 Length = 149415 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 490 cgcgcccgcgtcgccggcgccggc 513 |||| ||||||||||||||||||| Sbjct: 128369 cgcggccgcgtcgccggcgccggc 128392
>dbj|AP005188.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0473C09 Length = 141066 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 cacccgcgcccgcgtcgccg 505 |||||||||||||||||||| Sbjct: 79770 cacccgcgcccgcgtcgccg 79789
>dbj|AP004269.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0048D08 Length = 145772 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 489 ccgcgcccgcgtcgccggcgccgg 512 |||||| ||||||||||||||||| Sbjct: 40881 ccgcgctcgcgtcgccggcgccgg 40904
>emb|X52423.1|OSRAB16C O.sativa DNA for rab 16C gene Length = 2493 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 503 ccggcgccggcaccggcacc 522 |||||||||||||||||||| Sbjct: 1950 ccggcgccggcaccggcacc 1969
>emb|AJ000552.1|CPVP1HOM Craterostigma plantagineum mRNA for VP1 protein homologue Length = 2067 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 179 tgggcggccgtggcggcgcc 198 |||||||||||||||||||| Sbjct: 1147 tgggcggccgtggcggcgcc 1166
>ref|XM_311129.2| Anopheles gambiae str. PEST ENSANGP00000004749 (ENSANGG00000003705), partial mRNA Length = 723 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 ggcaacgtggtgggcgtggg 344 |||||||||||||||||||| Sbjct: 98 ggcaacgtggtgggcgtggg 79
>dbj|AK107817.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-F09, full insert sequence Length = 569 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 490 cgcgcccgcgtcgccggcgccggc 513 |||| ||||||||||||||||||| Sbjct: 284 cgcggccgcgtcgccggcgccggc 261
>dbj|AK107797.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-D11, full insert sequence Length = 697 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 496 cgcgtcgccggcgccggcaccggc 519 |||||||||||||||||| ||||| Sbjct: 194 cgcgtcgccggcgccggcgccggc 217
>dbj|AK072833.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023136C11, full insert sequence Length = 1476 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 499 gtcgccggcgccggcaccggcacc 522 ||||||||||||||| |||||||| Sbjct: 1006 gtcgccggcgccggcgccggcacc 1029
>dbj|AK071366.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023096D05, full insert sequence Length = 795 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 503 ccggcgccggcaccggcacc 522 |||||||||||||||||||| Sbjct: 467 ccggcgccggcaccggcacc 486
>ref|NM_210119.1| Eremothecium gossypii AEL096Wp (AEL096W), mRNA Length = 639 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 gggcggccgtggcggcgcca 199 |||||||||||||||||||| Sbjct: 24 gggcggccgtggcggcgcca 43
>dbj|AK066135.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013053F22, full insert sequence Length = 2529 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 486 cacccgcgcccgcgtcgccg 505 |||||||||||||||||||| Sbjct: 330 cacccgcgcccgcgtcgccg 349
>dbj|AK064057.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-F06, full insert sequence Length = 1445 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 499 gtcgccggcgccggcaccggcacc 522 ||||||||||||||| |||||||| Sbjct: 737 gtcgccggcgccggcgccggcacc 760
>emb|BX548070.5| Zebrafish DNA sequence from clone CH211-245P7 in linkage group 18, complete sequence Length = 173372 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 tgccgttcgcgcacgcgctg 372 |||||||||||||||||||| Sbjct: 85307 tgccgttcgcgcacgcgctg 85326
>gb|AY105485.1| Zea mays PCO065024 mRNA sequence Length = 722 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 ggccgtggccgtgagcgcgc 121 |||||||||||||||||||| Sbjct: 372 ggccgtggccgtgagcgcgc 391
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 486 cacccgcgcccgcgtcgccg 505 |||||||||||||||||||| Sbjct: 4593730 cacccgcgcccgcgtcgccg 4593711
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 496 cgcgtcgccggcgccggcaccggc 519 |||||||||||||||||| ||||| Sbjct: 15874454 cgcgtcgccggcgccggcgccggc 15874477
>emb|BX927093.8| Zebrafish DNA sequence from clone DKEY-53P2 in linkage group 11, complete sequence Length = 68923 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 tgccgttcgcgcacgcgctg 372 |||||||||||||||||||| Sbjct: 10397 tgccgttcgcgcacgcgctg 10416
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 490 cgcgcccgcgtcgccggcgc 509 |||||||||||||||||||| Sbjct: 1013239 cgcgcccgcgtcgccggcgc 1013258 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 cccgcgagccgctgcacgcc 312 |||||||||||||||||||| Sbjct: 5164 cccgcgagccgctgcacgcc 5183
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 ccgcggctccgagctgtacg 475 |||||||||||||||||||| Sbjct: 1895183 ccgcggctccgagctgtacg 1895164
>dbj|AB004838.1| Molluscum contagiosum virus DNA for 34-kDa protein, complete cds Length = 1482 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 295 cgcgagccgctgcacgccggcgtg 318 ||||||||||||||||| |||||| Sbjct: 900 cgcgagccgctgcacgcgggcgtg 877
>dbj|AB070947.1| Streptomyces avermitilis polyketide-9 biosynthetic gene cluster Length = 24268 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 gaggcccgcgagccgctgca 308 |||||||||||||||||||| Sbjct: 2327 gaggcccgcgagccgctgca 2308 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,108,071 Number of Sequences: 3902068 Number of extensions: 3108071 Number of successful extensions: 96263 Number of sequences better than 10.0: 131 Number of HSP's better than 10.0 without gapping: 139 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 89418 Number of HSP's gapped (non-prelim): 6821 length of query: 522 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 499 effective length of database: 17,143,297,704 effective search space: 8554505554296 effective search space used: 8554505554296 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
