ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart57a09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
2dbj|AP005169.3| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
3dbj|AP004990.3| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
4dbj|AP005105.3| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
5dbj|AP004573.3| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
6ref|XM_478479.1| Oryza sativa (japonica cultivar-group), mRNA 115 2e-22
7ref|XM_478483.1| Oryza sativa (japonica cultivar-group), mRNA 113 6e-22
8ref|XM_478478.1| Oryza sativa (japonica cultivar-group), mRNA 64 5e-07
9ref|NM_118433.3| Arabidopsis thaliana unknown protein AT4G23040 ... 42 2.0
10gb|AC119971.8| Mus musculus chromosome 16, clone RP24-480D8, com... 42 2.0
11gb|AC108423.10| Mus musculus chromosome 16, clone RP23-443N12, c... 42 2.0
12gb|AY142615.1| Arabidopsis thaliana unknown protein (At4g23040) ... 42 2.0
13gb|AF360264.1| Arabidopsis thaliana unknown protein (At4g23040) ... 42 2.0
14emb|AL161558.2|ATCHRIV58 Arabidopsis thaliana DNA chromosome 4, ... 42 2.0
15emb|AL031018.1|ATF7H19 Arabidopsis thaliana DNA chromosome 4, BA... 42 2.0
16gb|AC012615.4| Homo sapiens chromosome 19 clone CTB-31O20, compl... 42 2.0
17dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 42 2.0
18gb|AC090522.1|AC090522 Caenorhabditis briggsae cosmid CB015K23, ... 42 2.0
19emb|BX828365.1|CNS0A3YR Arabidopsis thaliana Full-length cDNA Co... 42 2.0
20emb|BX827495.1|CNS0A3M1 Arabidopsis thaliana Full-length cDNA Co... 42 2.0
21gb|AC155164.5| Mus musculus BAC clone RP24-74L7 from chromosome ... 40 7.8
22gb|AC123029.3| Mus musculus BAC clone RP24-571B18 from chromosom... 40 7.8
23emb|BX511035.7| Human DNA sequence from clone RP11-435J19 on chr... 40 7.8
24gb|DQ451007.1| Medicago sativa mitogen-activated protein kinase ... 40 7.8
25emb|AL353143.14| Human DNA sequence from clone RP11-383F12 on ch... 40 7.8
26emb|AL137017.9| Human DNA sequence from clone RP11-120J1 on chro... 40 7.8
27gb|DQ455242.1| Medicago truncatula cDNA-AFLP fragment BC43M33_17... 40 7.8
28emb|AL732499.6| Zebrafish DNA sequence from clone RP71-1C3 in li... 40 7.8
29emb|AL596117.19| Mouse DNA sequence from clone RP23-326P7 on chr... 40 7.8
30emb|AJ245811.1|RSO245811 Ralstonia solanacearum DNA for hrp gene... 40 7.8
31emb|CR933735.5| Mouse DNA sequence from clone DN-199E5 on chromo... 40 7.8
32gb|DQ417654.1| Medicago sativa mitogen-activated protein kinase ... 40 7.8
33dbj|AK153866.1| Mus musculus 2 days neonate thymus thymic cells ... 40 7.8
34gb|AC008343.4|AC008343 Drosophila melanogaster, chromosome 2R, r... 40 7.8
35ref|XM_220584.1| PREDICTED: Rattus norvegicus similar to hypothe... 40 7.8
36gb|AC155915.2| Mus musculus 6 BAC RP24-462N21 (Roswell Park Canc... 40 7.8
37emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 40 7.8
38gb|AE003810.3| Drosophila melanogaster chromosome 2R, section 40... 40 7.8
39gb|BC110677.1| Mus musculus translocase of inner mitochondrial m... 40 7.8
40dbj|AB100882.1| Ralstonia solanacearum genes for PopA, PopB, Pop... 40 7.8
41gb|AF030959.1|AF030959 Drosophila melanogaster metchnikowin prec... 40 7.8
42dbj|AB026629.1| Ralstonia solanacearum popA1 gene, complete cds 40 7.8
43dbj|AB032747.1| Ralstonia solanacearum popA-OE gene, complete cds 40 7.8

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  129 bits (65), Expect = 1e-26
 Identities = 113/129 (87%)
 Strand = Plus / Plus

                                                                            
Query: 405      ggatggagtctatgaaactgaagaagctccatggcaacctaaaagtggcaggcattctct 464
                |||| ||||||||||| || |||||||||||||||||| |||||| ||||||||||||||
Sbjct: 20511731 ggatagagtctatgaagctcaagaagctccatggcaacgtaaaagcggcaggcattctct 20511790

                                                                            
Query: 465      gctgcgtcgccggcgtcactgtgctggccttctacgaggggccaatgttcagatctttcg 524
                 ||||||  |||| ||||| ||||||||||||||| ||||||||||| |  |||| ||| 
Sbjct: 20511791 tctgcgtgaccggagtcaccgtgctggccttctaccaggggccaatgctgggatcgttca 20511850

                         
Query: 525      accatcacc 533
                |||||||||
Sbjct: 20511851 accatcacc 20511859



 Score =  125 bits (63), Expect = 2e-25
 Identities = 132/155 (85%)
 Strand = Plus / Minus

                                                                            
Query: 405      ggatggagtctatgaaactgaagaagctccatggcaacctaaaagtggcaggcattctct 464
                |||||||||||||||||||||||||| ||||||| ||  |||||| |||||| ||||| |
Sbjct: 20340917 ggatggagtctatgaaactgaagaagttccatggaaatgtaaaagcggcaggtattctgt 20340858

                                                                            
Query: 465      gctgcgtcgccggcgtcactgtgctggccttctacgaggggccaatgttcagatctttcg 524
                 |||| ||||||| |||||  |  ||||||||||||||||||||||||||| ||| ||| 
Sbjct: 20340857 tctgcatcgccggtgtcacaattttggccttctacgaggggccaatgttcaaatcgttca 20340798

                                                   
Query: 525      accatcaccggctcttccaacacggcagcggcagc 559
                |||||||||  ||||| || || |||||| |||||
Sbjct: 20340797 accatcaccacctctttcagcaaggcagcagcagc 20340763



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 106/125 (84%)
 Strand = Plus / Minus

                                                                            
Query: 83       gttctcatcagggtcatgtactccggcatgcatatcatgagcaagatagcgctggatcaa 142
                ||||| |||||| |||||||||| || |||||| | ||||||||||| ||  ||||||||
Sbjct: 20342077 gttctgatcaggatcatgtactctggtatgcatgtgatgagcaagatcgccttggatcaa 20342018

                                                                            
Query: 143      ggcatgaaccccttcgtcttcgtattctaccggcataccaccgctgcccttgtgctcatc 202
                |||||||||||||| || ||  | ||||| ||||||||||| ||||| || ||||| |||
Sbjct: 20342017 ggcatgaaccccttggtgtttctgttctatcggcataccactgctgcactcgtgctgatc 20341958

                     
Query: 203      cctat 207
                |||||
Sbjct: 20341957 cctat 20341953



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 83/97 (85%)
 Strand = Plus / Minus

                                                                            
Query: 288      gggtaacagcttgtggcgtcttattcaaccttggtctcaactatgcatccgcgacatcat 347
                |||| ||||||||||||| |||||| |||||||||||||| ||| | || ||  ||||||
Sbjct: 20341251 gggtgacagcttgtggcgacttatttaaccttggtctcaattatacttcggcagcatcat 20341192

                                                     
Query: 348      cgtcggcgttgtacaatgttcaaccggtggttacctt 384
                | || || |||||||| |||||||| |||||||||||
Sbjct: 20341191 catcagcattgtacaacgttcaaccagtggttacctt 20341155



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 79/93 (84%)
 Strand = Plus / Plus

                                                                            
Query: 314      aaccttggtctcaactatgcatccgcgacatcatcgtcggcgttgtacaatgttcaaccg 373
                ||||||||||| || ||||| || || || ||||| || || ||||||||||||||||| 
Sbjct: 20532125 aaccttggtctgaattatgcttcagcaacttcatcatcagcattgtacaatgttcaacca 20532184

                                                 
Query: 374      gtggttaccttcattctggcggtcataattggg 406
                |||||||||||||| || || |||||| |||||
Sbjct: 20532185 gtggttaccttcatccttgcagtcatatttggg 20532217



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 116/144 (80%)
 Strand = Plus / Plus

                                                                            
Query: 83       gttctcatcagggtcatgtactccggcatgcatatcatgagcaagatagcgctggatcaa 142
                ||||| |||||| |||||||||| |  |||||  || |||||||| | ||  ||||||||
Sbjct: 20530643 gttctgatcaggatcatgtactcggttatgcaagtcgtgagcaaggttgccttggatcaa 20530702

                                                                            
Query: 143      ggcatgaaccccttcgtcttcgtattctaccggcataccaccgctgcccttgtgctcatc 202
                ||||||| ||| || || ||  ||||||| ||||||||| | |||||||| ||| | |||
Sbjct: 20530703 ggcatgagcccgttggtgtttatattctatcggcataccgctgctgccctcgtgttgatc 20530762

                                        
Query: 203      cctatcgcctttgctctggagagg 226
                ||||| || |||| ||| ||||||
Sbjct: 20530763 cctattgcttttgttctagagagg 20530786



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 80/96 (83%)
 Strand = Plus / Plus

                                                                            
Query: 83       gttctcatcagggtcatgtactccggcatgcatatcatgagcaagatagcgctggatcaa 142
                ||||| |||||| |||||||||| || |||||  ||||||||||| | ||  ||||||||
Sbjct: 20509012 gttctgatcaggctcatgtactctggtatgcacgtcatgagcaaggtcgccttggatcaa 20509071

                                                    
Query: 143      ggcatgaaccccttcgtcttcgtattctaccggcat 178
                ||||||| ||| ||||| || || ||||| ||||||
Sbjct: 20509072 ggcatgagccctttcgtgtttgtgttctatcggcat 20509107



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 121/152 (79%)
 Strand = Plus / Plus

                                                                            
Query: 408      tggagtctatgaaactgaagaagctccatggcaacctaaaagtggcaggcattctctgct 467
                |||||||||||||||||||||   |||||||  |  |||||  ||| || ||||| | ||
Sbjct: 20532381 tggagtctatgaaactgaagagattccatggacatgtaaaatcggctggtattctgttct 20532440

                                                                            
Query: 468      gcgtcgccggcgtcactgtgctggccttctacgaggggccaatgttcagatctttcgacc 527
                || | | ||| ||||  ||| |||||||||| |||||||| ||||||| ||| ||| |||
Sbjct: 20532441 gcattggcggagtcatcgtgttggccttctatgaggggcctatgttcaaatcattcaacc 20532500

                                                
Query: 528      atcaccggctcttccaacacggcagcggcagc 559
                ||||||  ||||| || || |||||| |||||
Sbjct: 20532501 atcaccacctctttcagcaaggcagcagcagc 20532532



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                        
Query: 234      ctaaacctgtgacgttgaagattgcaggcaagatgttcgtgcacgccttatatggg 289
                ||||||| |||||||| || |||||||| || ||||| || || ||||||||||||
Sbjct: 20341831 ctaaaccggtgacgttaaaaattgcagggaaaatgtttgtacatgccttatatggg 20341776



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>dbj|AP005169.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0077J18
          Length = 180944

 Score =  129 bits (65), Expect = 1e-26
 Identities = 113/129 (87%)
 Strand = Plus / Plus

                                                                         
Query: 405   ggatggagtctatgaaactgaagaagctccatggcaacctaaaagtggcaggcattctct 464
             |||| ||||||||||| || |||||||||||||||||| |||||| ||||||||||||||
Sbjct: 92841 ggatagagtctatgaagctcaagaagctccatggcaacgtaaaagcggcaggcattctct 92900

                                                                         
Query: 465   gctgcgtcgccggcgtcactgtgctggccttctacgaggggccaatgttcagatctttcg 524
              ||||||  |||| ||||| ||||||||||||||| ||||||||||| |  |||| ||| 
Sbjct: 92901 tctgcgtgaccggagtcaccgtgctggccttctaccaggggccaatgctgggatcgttca 92960

                      
Query: 525   accatcacc 533
             |||||||||
Sbjct: 92961 accatcacc 92969



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 79/93 (84%)
 Strand = Plus / Plus

                                                                          
Query: 314    aaccttggtctcaactatgcatccgcgacatcatcgtcggcgttgtacaatgttcaaccg 373
              ||||||||||| || ||||| || || || ||||| || || ||||||||||||||||| 
Sbjct: 113235 aaccttggtctgaattatgcttcagcaacttcatcatcagcattgtacaatgttcaacca 113294

                                               
Query: 374    gtggttaccttcattctggcggtcataattggg 406
              |||||||||||||| || || |||||| |||||
Sbjct: 113295 gtggttaccttcatccttgcagtcatatttggg 113327



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 116/144 (80%)
 Strand = Plus / Plus

                                                                          
Query: 83     gttctcatcagggtcatgtactccggcatgcatatcatgagcaagatagcgctggatcaa 142
              ||||| |||||| |||||||||| |  |||||  || |||||||| | ||  ||||||||
Sbjct: 111753 gttctgatcaggatcatgtactcggttatgcaagtcgtgagcaaggttgccttggatcaa 111812

                                                                          
Query: 143    ggcatgaaccccttcgtcttcgtattctaccggcataccaccgctgcccttgtgctcatc 202
              ||||||| ||| || || ||  ||||||| ||||||||| | |||||||| ||| | |||
Sbjct: 111813 ggcatgagcccgttggtgtttatattctatcggcataccgctgctgccctcgtgttgatc 111872

                                      
Query: 203    cctatcgcctttgctctggagagg 226
              ||||| || |||| ||| ||||||
Sbjct: 111873 cctattgcttttgttctagagagg 111896



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 80/96 (83%)
 Strand = Plus / Plus

                                                                         
Query: 83    gttctcatcagggtcatgtactccggcatgcatatcatgagcaagatagcgctggatcaa 142
             ||||| |||||| |||||||||| || |||||  ||||||||||| | ||  ||||||||
Sbjct: 90122 gttctgatcaggctcatgtactctggtatgcacgtcatgagcaaggtcgccttggatcaa 90181

                                                 
Query: 143   ggcatgaaccccttcgtcttcgtattctaccggcat 178
             ||||||| ||| ||||| || || ||||| ||||||
Sbjct: 90182 ggcatgagccctttcgtgtttgtgttctatcggcat 90217



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 121/152 (79%)
 Strand = Plus / Plus

                                                                          
Query: 408    tggagtctatgaaactgaagaagctccatggcaacctaaaagtggcaggcattctctgct 467
              |||||||||||||||||||||   |||||||  |  |||||  ||| || ||||| | ||
Sbjct: 113491 tggagtctatgaaactgaagagattccatggacatgtaaaatcggctggtattctgttct 113550

                                                                          
Query: 468    gcgtcgccggcgtcactgtgctggccttctacgaggggccaatgttcagatctttcgacc 527
              || | | ||| ||||  ||| |||||||||| |||||||| ||||||| ||| ||| |||
Sbjct: 113551 gcattggcggagtcatcgtgttggccttctatgaggggcctatgttcaaatcattcaacc 113610

                                              
Query: 528    atcaccggctcttccaacacggcagcggcagc 559
              ||||||  ||||| || || |||||| |||||
Sbjct: 113611 atcaccacctctttcagcaaggcagcagcagc 113642



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>dbj|AP004990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OSJNBa0007H12
          Length = 150881

 Score =  129 bits (65), Expect = 1e-26
 Identities = 113/129 (87%)
 Strand = Plus / Plus

                                                                        
Query: 405  ggatggagtctatgaaactgaagaagctccatggcaacctaaaagtggcaggcattctct 464
            |||| ||||||||||| || |||||||||||||||||| |||||| ||||||||||||||
Sbjct: 2810 ggatagagtctatgaagctcaagaagctccatggcaacgtaaaagcggcaggcattctct 2869

                                                                        
Query: 465  gctgcgtcgccggcgtcactgtgctggccttctacgaggggccaatgttcagatctttcg 524
             ||||||  |||| ||||| ||||||||||||||| ||||||||||| |  |||| ||| 
Sbjct: 2870 tctgcgtgaccggagtcaccgtgctggccttctaccaggggccaatgctgggatcgttca 2929

                     
Query: 525  accatcacc 533
            |||||||||
Sbjct: 2930 accatcacc 2938



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 79/93 (84%)
 Strand = Plus / Plus

                                                                         
Query: 314   aaccttggtctcaactatgcatccgcgacatcatcgtcggcgttgtacaatgttcaaccg 373
             ||||||||||| || ||||| || || || ||||| || || ||||||||||||||||| 
Sbjct: 23204 aaccttggtctgaattatgcttcagcaacttcatcatcagcattgtacaatgttcaacca 23263

                                              
Query: 374   gtggttaccttcattctggcggtcataattggg 406
             |||||||||||||| || || |||||| |||||
Sbjct: 23264 gtggttaccttcatccttgcagtcatatttggg 23296



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 116/144 (80%)
 Strand = Plus / Plus

                                                                         
Query: 83    gttctcatcagggtcatgtactccggcatgcatatcatgagcaagatagcgctggatcaa 142
             ||||| |||||| |||||||||| |  |||||  || |||||||| | ||  ||||||||
Sbjct: 21722 gttctgatcaggatcatgtactcggttatgcaagtcgtgagcaaggttgccttggatcaa 21781

                                                                         
Query: 143   ggcatgaaccccttcgtcttcgtattctaccggcataccaccgctgcccttgtgctcatc 202
             ||||||| ||| || || ||  ||||||| ||||||||| | |||||||| ||| | |||
Sbjct: 21782 ggcatgagcccgttggtgtttatattctatcggcataccgctgctgccctcgtgttgatc 21841

                                     
Query: 203   cctatcgcctttgctctggagagg 226
             ||||| || |||| ||| ||||||
Sbjct: 21842 cctattgcttttgttctagagagg 21865



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 80/96 (83%)
 Strand = Plus / Plus

                                                                       
Query: 83  gttctcatcagggtcatgtactccggcatgcatatcatgagcaagatagcgctggatcaa 142
           ||||| |||||| |||||||||| || |||||  ||||||||||| | ||  ||||||||
Sbjct: 91  gttctgatcaggctcatgtactctggtatgcacgtcatgagcaaggtcgccttggatcaa 150

                                               
Query: 143 ggcatgaaccccttcgtcttcgtattctaccggcat 178
           ||||||| ||| ||||| || || ||||| ||||||
Sbjct: 151 ggcatgagccctttcgtgtttgtgttctatcggcat 186



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 121/152 (79%)
 Strand = Plus / Plus

                                                                         
Query: 408   tggagtctatgaaactgaagaagctccatggcaacctaaaagtggcaggcattctctgct 467
             |||||||||||||||||||||   |||||||  |  |||||  ||| || ||||| | ||
Sbjct: 23460 tggagtctatgaaactgaagagattccatggacatgtaaaatcggctggtattctgttct 23519

                                                                         
Query: 468   gcgtcgccggcgtcactgtgctggccttctacgaggggccaatgttcagatctttcgacc 527
             || | | ||| ||||  ||| |||||||||| |||||||| ||||||| ||| ||| |||
Sbjct: 23520 gcattggcggagtcatcgtgttggccttctatgaggggcctatgttcaaatcattcaacc 23579

                                             
Query: 528   atcaccggctcttccaacacggcagcggcagc 559
             ||||||  ||||| || || |||||| |||||
Sbjct: 23580 atcaccacctctttcagcaaggcagcagcagc 23611



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>dbj|AP005105.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0052O11
          Length = 106467

 Score =  125 bits (63), Expect = 2e-25
 Identities = 132/155 (85%)
 Strand = Plus / Minus

                                                                         
Query: 405   ggatggagtctatgaaactgaagaagctccatggcaacctaaaagtggcaggcattctct 464
             |||||||||||||||||||||||||| ||||||| ||  |||||| |||||| ||||| |
Sbjct: 83528 ggatggagtctatgaaactgaagaagttccatggaaatgtaaaagcggcaggtattctgt 83469

                                                                         
Query: 465   gctgcgtcgccggcgtcactgtgctggccttctacgaggggccaatgttcagatctttcg 524
              |||| ||||||| |||||  |  ||||||||||||||||||||||||||| ||| ||| 
Sbjct: 83468 tctgcatcgccggtgtcacaattttggccttctacgaggggccaatgttcaaatcgttca 83409

                                                
Query: 525   accatcaccggctcttccaacacggcagcggcagc 559
             |||||||||  ||||| || || |||||| |||||
Sbjct: 83408 accatcaccacctctttcagcaaggcagcagcagc 83374



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 106/125 (84%)
 Strand = Plus / Minus

                                                                         
Query: 83    gttctcatcagggtcatgtactccggcatgcatatcatgagcaagatagcgctggatcaa 142
             ||||| |||||| |||||||||| || |||||| | ||||||||||| ||  ||||||||
Sbjct: 84688 gttctgatcaggatcatgtactctggtatgcatgtgatgagcaagatcgccttggatcaa 84629

                                                                         
Query: 143   ggcatgaaccccttcgtcttcgtattctaccggcataccaccgctgcccttgtgctcatc 202
             |||||||||||||| || ||  | ||||| ||||||||||| ||||| || ||||| |||
Sbjct: 84628 ggcatgaaccccttggtgtttctgttctatcggcataccactgctgcactcgtgctgatc 84569

                  
Query: 203   cctat 207
             |||||
Sbjct: 84568 cctat 84564



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 83/97 (85%)
 Strand = Plus / Minus

                                                                         
Query: 288   gggtaacagcttgtggcgtcttattcaaccttggtctcaactatgcatccgcgacatcat 347
             |||| ||||||||||||| |||||| |||||||||||||| ||| | || ||  ||||||
Sbjct: 83862 gggtgacagcttgtggcgacttatttaaccttggtctcaattatacttcggcagcatcat 83803

                                                  
Query: 348   cgtcggcgttgtacaatgttcaaccggtggttacctt 384
             | || || |||||||| |||||||| |||||||||||
Sbjct: 83802 catcagcattgtacaacgttcaaccagtggttacctt 83766



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                     
Query: 234   ctaaacctgtgacgttgaagattgcaggcaagatgttcgtgcacgccttatatggg 289
             ||||||| |||||||| || |||||||| || ||||| || || ||||||||||||
Sbjct: 84442 ctaaaccggtgacgttaaaaattgcagggaaaatgtttgtacatgccttatatggg 84387



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>dbj|AP004573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0678G09
          Length = 139220

 Score =  125 bits (63), Expect = 2e-25
 Identities = 132/155 (85%)
 Strand = Plus / Minus

                                                                         
Query: 405   ggatggagtctatgaaactgaagaagctccatggcaacctaaaagtggcaggcattctct 464
             |||||||||||||||||||||||||| ||||||| ||  |||||| |||||| ||||| |
Sbjct: 49817 ggatggagtctatgaaactgaagaagttccatggaaatgtaaaagcggcaggtattctgt 49758

                                                                         
Query: 465   gctgcgtcgccggcgtcactgtgctggccttctacgaggggccaatgttcagatctttcg 524
              |||| ||||||| |||||  |  ||||||||||||||||||||||||||| ||| ||| 
Sbjct: 49757 tctgcatcgccggtgtcacaattttggccttctacgaggggccaatgttcaaatcgttca 49698

                                                
Query: 525   accatcaccggctcttccaacacggcagcggcagc 559
             |||||||||  ||||| || || |||||| |||||
Sbjct: 49697 accatcaccacctctttcagcaaggcagcagcagc 49663



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 106/125 (84%)
 Strand = Plus / Minus

                                                                         
Query: 83    gttctcatcagggtcatgtactccggcatgcatatcatgagcaagatagcgctggatcaa 142
             ||||| |||||| |||||||||| || |||||| | ||||||||||| ||  ||||||||
Sbjct: 50977 gttctgatcaggatcatgtactctggtatgcatgtgatgagcaagatcgccttggatcaa 50918

                                                                         
Query: 143   ggcatgaaccccttcgtcttcgtattctaccggcataccaccgctgcccttgtgctcatc 202
             |||||||||||||| || ||  | ||||| ||||||||||| ||||| || ||||| |||
Sbjct: 50917 ggcatgaaccccttggtgtttctgttctatcggcataccactgctgcactcgtgctgatc 50858

                  
Query: 203   cctat 207
             |||||
Sbjct: 50857 cctat 50853



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 83/97 (85%)
 Strand = Plus / Minus

                                                                         
Query: 288   gggtaacagcttgtggcgtcttattcaaccttggtctcaactatgcatccgcgacatcat 347
             |||| ||||||||||||| |||||| |||||||||||||| ||| | || ||  ||||||
Sbjct: 50151 gggtgacagcttgtggcgacttatttaaccttggtctcaattatacttcggcagcatcat 50092

                                                  
Query: 348   cgtcggcgttgtacaatgttcaaccggtggttacctt 384
             | || || |||||||| |||||||| |||||||||||
Sbjct: 50091 catcagcattgtacaacgttcaaccagtggttacctt 50055



 Score = 48.1 bits (24), Expect = 0.032
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                     
Query: 234   ctaaacctgtgacgttgaagattgcaggcaagatgttcgtgcacgccttatatggg 289
             ||||||| |||||||| || |||||||| || ||||| || || ||||||||||||
Sbjct: 50731 ctaaaccggtgacgttaaaaattgcagggaaaatgtttgtacatgccttatatggg 50676



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>ref|XM_478479.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 531

 Score =  115 bits (58), Expect = 2e-22
 Identities = 103/118 (87%)
 Strand = Plus / Plus

                                                                       
Query: 416 atgaaactgaagaagctccatggcaacctaaaagtggcaggcattctctgctgcgtcgcc 475
           ||||| || |||||||||||||||||| |||||| |||||||||||||| ||||||  ||
Sbjct: 1   atgaagctcaagaagctccatggcaacgtaaaagcggcaggcattctcttctgcgtgacc 60

                                                                     
Query: 476 ggcgtcactgtgctggccttctacgaggggccaatgttcagatctttcgaccatcacc 533
           || ||||| ||||||||||||||| ||||||||||| |  |||| ||| |||||||||
Sbjct: 61  ggagtcaccgtgctggccttctaccaggggccaatgctgggatcgttcaaccatcacc 118



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>ref|XM_478483.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 855

 Score =  113 bits (57), Expect = 6e-22
 Identities = 237/297 (79%)
 Strand = Plus / Plus

                                                                       
Query: 83  gttctcatcagggtcatgtactccggcatgcatatcatgagcaagatagcgctggatcaa 142
           ||||| |||||| |||||||||| |  |||||  || |||||||| | ||  ||||||||
Sbjct: 37  gttctgatcaggatcatgtactcggttatgcaagtcgtgagcaaggttgccttggatcaa 96

                                                                       
Query: 143 ggcatgaaccccttcgtcttcgtattctaccggcataccaccgctgcccttgtgctcatc 202
           ||||||| ||| || || ||  ||||||| ||||||||| | |||||||| ||| | |||
Sbjct: 97  ggcatgagcccgttggtgtttatattctatcggcataccgctgctgccctcgtgttgatc 156

                                                                       
Query: 203 cctatcgcctttgctctggagaggcaaaagactaaacctgtgacgttgaagattgcaggc 262
           ||||| || |||| ||| ||||||  |||  ||||||  |||||||| || | |||||| 
Sbjct: 157 cctattgcttttgttctagagaggggaaaagctaaacgggtgacgttaaaaaatgcaggg 216

                                                                       
Query: 263 aagatgttcgtgcacgccttatatggggtaacagcttgtggcgtcttattcaaccttggt 322
           || |||||  | || |||||||||||||| ||||  ||||| | ||| || |||||||||
Sbjct: 217 aaaatgtttatacatgccttatatggggtgacaggatgtggtgacttctttaaccttggt 276

                                                                    
Query: 323 ctcaactatgcatccgcgacatcatcgtcggcgttgtacaatgttcaaccggtggtt 379
           || || ||||| || || || ||||| || || ||||||||||||||||| ||||||
Sbjct: 277 ctgaattatgcttcagcaacttcatcatcagcattgtacaatgttcaaccagtggtt 333



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 408 tggagtctatgaaactgaaga 428
           |||||||||||||||||||||
Sbjct: 333 tggagtctatgaaactgaaga 353



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>ref|XM_478478.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 399

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 80/96 (83%)
 Strand = Plus / Plus

                                                                       
Query: 83  gttctcatcagggtcatgtactccggcatgcatatcatgagcaagatagcgctggatcaa 142
           ||||| |||||| |||||||||| || |||||  ||||||||||| | ||  ||||||||
Sbjct: 37  gttctgatcaggctcatgtactctggtatgcacgtcatgagcaaggtcgccttggatcaa 96

                                               
Query: 143 ggcatgaaccccttcgtcttcgtattctaccggcat 178
           ||||||| ||| ||||| || || ||||| ||||||
Sbjct: 97  ggcatgagccctttcgtgtttgtgttctatcggcat 132



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>ref|NM_118433.3| Arabidopsis thaliana unknown protein AT4G23040 mRNA, complete cds
          Length = 1819

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 524 gaccatcaccggctcttccaa 544
           |||||||||||||||||||||
Sbjct: 159 gaccatcaccggctcttccaa 179



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>gb|AC119971.8| Mus musculus chromosome 16, clone RP24-480D8, complete sequence
          Length = 166093

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 450    tggcaggcattctctgctgcg 470
              |||||||||||||||||||||
Sbjct: 156653 tggcaggcattctctgctgcg 156633



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>gb|AC108423.10| Mus musculus chromosome 16, clone RP23-443N12, complete sequence
          Length = 192819

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 450   tggcaggcattctctgctgcg 470
             |||||||||||||||||||||
Sbjct: 84780 tggcaggcattctctgctgcg 84760



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>gb|AY142615.1| Arabidopsis thaliana unknown protein (At4g23040) mRNA, complete cds
          Length = 1609

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 524 gaccatcaccggctcttccaa 544
           |||||||||||||||||||||
Sbjct: 39  gaccatcaccggctcttccaa 59



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>gb|AF360264.1| Arabidopsis thaliana unknown protein (At4g23040) mRNA, complete cds
          Length = 1832

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 524 gaccatcaccggctcttccaa 544
           |||||||||||||||||||||
Sbjct: 156 gaccatcaccggctcttccaa 176



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>emb|AL161558.2|ATCHRIV58 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 58
          Length = 193550

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 524    gaccatcaccggctcttccaa 544
              |||||||||||||||||||||
Sbjct: 120715 gaccatcaccggctcttccaa 120695



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>emb|AL031018.1|ATF7H19 Arabidopsis thaliana DNA chromosome 4, BAC clone F7H19 (ESSA project)
          Length = 139316

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 524   gaccatcaccggctcttccaa 544
             |||||||||||||||||||||
Sbjct: 91628 gaccatcaccggctcttccaa 91608



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>gb|AC012615.4| Homo sapiens chromosome 19 clone CTB-31O20, complete sequence
          Length = 149252

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 553  cggcagctcctctggagcagg 573
            |||||||||||||||||||||
Sbjct: 2046 cggcagctcctctggagcagg 2066



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>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009
          Length = 1913118

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 210     cctttgctctggagaggcaaaagac 234
               |||||||||||||||||||| ||||
Sbjct: 1342077 cctttgctctggagaggcaagagac 1342053



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>gb|AC090522.1|AC090522 Caenorhabditis briggsae cosmid CB015K23, complete sequence
          Length = 46455

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 509   atgttcagatctttcgaccat 529
             |||||||||||||||||||||
Sbjct: 35026 atgttcagatctttcgaccat 35006



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>emb|BX828365.1|CNS0A3YR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH80ZE07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1783

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 524 gaccatcaccggctcttccaa 544
           |||||||||||||||||||||
Sbjct: 159 gaccatcaccggctcttccaa 179



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>emb|BX827495.1|CNS0A3M1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS64ZG05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1768

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 524 gaccatcaccggctcttccaa 544
           |||||||||||||||||||||
Sbjct: 131 gaccatcaccggctcttccaa 151



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>gb|AC155164.5| Mus musculus BAC clone RP24-74L7 from chromosome 8, complete sequence
          Length = 193057

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 534    ggctcttccaacacggcagcggcagctc 561
              ||||||||||||| ||| ||||||||||
Sbjct: 192074 ggctcttccaacatggcggcggcagctc 192101



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>gb|AC123029.3| Mus musculus BAC clone RP24-571B18 from chromosome 8, complete sequence
          Length = 154235

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 534    ggctcttccaacacggcagcggcagctc 561
              ||||||||||||| ||| ||||||||||
Sbjct: 152802 ggctcttccaacatggcggcggcagctc 152775



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>emb|BX511035.7| Human DNA sequence from clone RP11-435J19 on chromosome 22, complete
             sequence
          Length = 70823

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 554   ggcagctcctctggagcagg 573
             ||||||||||||||||||||
Sbjct: 10384 ggcagctcctctggagcagg 10365



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>gb|DQ451007.1| Medicago sativa mitogen-activated protein kinase gene, complete cds
          Length = 4051

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 431  ctccatggcaacctaaaagtggca 454
            |||||||||||||||| |||||||
Sbjct: 3586 ctccatggcaacctaagagtggca 3563



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>emb|AL353143.14| Human DNA sequence from clone RP11-383F12 on chromosome 13 Contains part
              of a novel gene (including KIAA0865), possible ortholog of
              rat myosin heavy chain Myr 8 (Loc192253) and a novel gene,
              complete sequence
          Length = 170276

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 476    ggcgtcactgtgctggcctt 495
              ||||||||||||||||||||
Sbjct: 149716 ggcgtcactgtgctggcctt 149735



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>emb|AL137017.9| Human DNA sequence from clone RP11-120J1 on chromosome 9 Contains the
             3' end of a novel gene and a CpG island, complete sequence
          Length = 167585

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    aaaaacacttgcaaaaatca 41
             ||||||||||||||||||||
Sbjct: 59043 aaaaacacttgcaaaaatca 59062



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>gb|DQ455242.1| Medicago truncatula cDNA-AFLP fragment BC43M33_173 sequence
          Length = 245

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 431 ctccatggcaacctaaaagtggca 454
           |||||||||||||||| |||||||
Sbjct: 61  ctccatggcaacctaagagtggca 84



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>emb|AL732499.6| Zebrafish DNA sequence from clone RP71-1C3 in linkage group 19
            Contains part of a novel gene similar to CSMD (CUB and
            sushi multiple domains protein), complete sequence
          Length = 161104

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 354  cgttgtacaatgttcaaccg 373
            ||||||||||||||||||||
Sbjct: 4405 cgttgtacaatgttcaaccg 4424



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>emb|AL596117.19| Mouse DNA sequence from clone RP23-326P7 on chromosome 11 Contains the
              Gp1ba gene for glycoprotein 1b alpha polypeptide, the
              Slc25a11 gene for solute carrier family 25 (mitochondrial
              carrier; oxoglutarate carrier) member 11, the gene for a
              novel PA domain and C3HC4 type zinc finger (RING finger)
              containing protein, the Pfn1 gene for profilin 1, five
              novel genes, the Eno3 gene for muscle enolase 3 beta, the
              Spag7 gene for sperm associated antigen 7, the Kif1c gene
              for kinesin family member 1C, a ribosomal protein 37A
              (Rpl37a) pseudogene, the gene for a novel zinc finger
              protein and six CpG islands, complete sequence
          Length = 207086

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 23     aaaacacttgcaaaaatcag 42
              ||||||||||||||||||||
Sbjct: 143954 aaaacacttgcaaaaatcag 143973



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>emb|AJ245811.1|RSO245811 Ralstonia solanacearum DNA for hrp gene locus
          Length = 23407

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 45    tgggtggtgccaacggcgccaagg 68
             |||| |||||||||||||||||||
Sbjct: 22590 tgggcggtgccaacggcgccaagg 22567



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>emb|CR933735.5| Mouse DNA sequence from clone DN-199E5 on chromosome 11, complete
              sequence
          Length = 188880

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 23     aaaacacttgcaaaaatcag 42
              ||||||||||||||||||||
Sbjct: 107523 aaaacacttgcaaaaatcag 107542



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>gb|DQ417654.1| Medicago sativa mitogen-activated protein kinase (MAPK) mRNA,
            complete cds
          Length = 1379

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 431  ctccatggcaacctaaaagtggca 454
            |||||||||||||||| |||||||
Sbjct: 1056 ctccatggcaacctaagagtggca 1033



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>dbj|AK153866.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN
           full-length enriched library, clone:E430001H08
           product:translocator of inner mitochondrial membrane 44,
           full insert sequence
          Length = 1778

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 534 ggctcttccaacacggcagcggcagctc 561
           ||||||||||||| ||| ||||||||||
Sbjct: 11  ggctcttccaacatggcggcggcagctc 38



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>gb|AC008343.4|AC008343 Drosophila melanogaster, chromosome 2R, region 51F-52A, BAC clone
             BACR03D24, complete sequence
          Length = 158402

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 20    agaaaaacacttgcaaaaat 39
             ||||||||||||||||||||
Sbjct: 60189 agaaaaacacttgcaaaaat 60208



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>ref|XM_220584.1| PREDICTED: Rattus norvegicus similar to hypothetical protein
           MGC32231 (predicted) (LOC287414), mRNA
          Length = 1791

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 554 ggcagctcctctggagcagg 573
           ||||||||||||||||||||
Sbjct: 798 ggcagctcctctggagcagg 817



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>gb|AC155915.2| Mus musculus 6 BAC RP24-462N21 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 152279

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 411    agtctatgaaactgaagaag 430
              ||||||||||||||||||||
Sbjct: 138485 agtctatgaaactgaagaag 138504



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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 45      tgggtggtgccaacggcgccaagg 68
               |||| |||||||||||||||||||
Sbjct: 1106806 tgggcggtgccaacggcgccaagg 1106783



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>gb|AE003810.3| Drosophila melanogaster chromosome 2R, section 40 of 73 of the
           complete sequence
          Length = 271178

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 20  agaaaaacacttgcaaaaat 39
           ||||||||||||||||||||
Sbjct: 441 agaaaaacacttgcaaaaat 460



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>gb|BC110677.1| Mus musculus translocase of inner mitochondrial membrane 44, mRNA
           (cDNA clone MGC:118030 IMAGE:4979986), complete cds
          Length = 1803

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 534 ggctcttccaacacggcagcggcagctc 561
           ||||||||||||| ||| ||||||||||
Sbjct: 5   ggctcttccaacatggcggcggcagctc 32



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>dbj|AB100882.1| Ralstonia solanacearum genes for PopA, PopB, PopC, cpmplete cds
          Length = 4697

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 45  tgggtggtgccaacggcgccaagg 68
           |||| |||||||||||||||||||
Sbjct: 425 tgggcggtgccaacggcgccaagg 448



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>gb|AF030959.1|AF030959 Drosophila melanogaster metchnikowin precursor (Mtk) gene, complete
            cds
          Length = 2485

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 20   agaaaaacacttgcaaaaat 39
            ||||||||||||||||||||
Sbjct: 2239 agaaaaacacttgcaaaaat 2258



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>dbj|AB026629.1| Ralstonia solanacearum popA1 gene, complete cds
          Length = 993

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 45  tgggtggtgccaacggcgccaagg 68
           |||| |||||||||||||||||||
Sbjct: 419 tgggcggtgccaacggcgccaagg 442



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>dbj|AB032747.1| Ralstonia solanacearum popA-OE gene, complete cds
          Length = 1085

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 45  tgggtggtgccaacggcgccaagg 68
           |||| |||||||||||||||||||
Sbjct: 490 tgggcggtgccaacggcgccaagg 513


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,057,263
Number of Sequences: 3902068
Number of extensions: 4057263
Number of successful extensions: 76887
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76752
Number of HSP's gapped (non-prelim): 135
length of query: 574
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 551
effective length of database: 17,143,297,704
effective search space: 9445957034904
effective search space used: 9445957034904
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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