No.
Definition
Score (bits)
E Value
1 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...
129
1e-26
2 dbj|AP005169.3| Oryza sativa (japonica cultivar-group) genomic D...
129
1e-26
3 dbj|AP004990.3| Oryza sativa (japonica cultivar-group) genomic D...
129
1e-26
4 dbj|AP005105.3| Oryza sativa (japonica cultivar-group) genomic D...
125
2e-25
5 dbj|AP004573.3| Oryza sativa (japonica cultivar-group) genomic D...
125
2e-25
6 ref|XM_478479.1| Oryza sativa (japonica cultivar-group), mRNA
115
2e-22
7 ref|XM_478483.1| Oryza sativa (japonica cultivar-group), mRNA
113
6e-22
8 ref|XM_478478.1| Oryza sativa (japonica cultivar-group), mRNA
64
5e-07
9 ref|NM_118433.3| Arabidopsis thaliana unknown protein AT4G23040 ...
42
2.0
10 gb|AC119971.8| Mus musculus chromosome 16, clone RP24-480D8, com...
42
2.0
11 gb|AC108423.10| Mus musculus chromosome 16, clone RP23-443N12, c...
42
2.0
12 gb|AY142615.1| Arabidopsis thaliana unknown protein (At4g23040) ...
42
2.0
13 gb|AF360264.1| Arabidopsis thaliana unknown protein (At4g23040) ...
42
2.0
14 emb|AL161558.2|ATCHRIV58 Arabidopsis thaliana DNA chromosome 4, ...
42
2.0
15 emb|AL031018.1|ATF7H19 Arabidopsis thaliana DNA chromosome 4, BA...
42
2.0
16 gb|AC012615.4| Homo sapiens chromosome 19 clone CTB-31O20, compl...
42
2.0
17 dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009
42
2.0
18 gb|AC090522.1|AC090522 Caenorhabditis briggsae cosmid CB015K23, ...
42
2.0
19 emb|BX828365.1|CNS0A3YR Arabidopsis thaliana Full-length cDNA Co...
42
2.0
20 emb|BX827495.1|CNS0A3M1 Arabidopsis thaliana Full-length cDNA Co...
42
2.0
21 gb|AC155164.5| Mus musculus BAC clone RP24-74L7 from chromosome ...
40
7.8
22 gb|AC123029.3| Mus musculus BAC clone RP24-571B18 from chromosom...
40
7.8
23 emb|BX511035.7| Human DNA sequence from clone RP11-435J19 on chr...
40
7.8
24 gb|DQ451007.1| Medicago sativa mitogen-activated protein kinase ...
40
7.8
25 emb|AL353143.14| Human DNA sequence from clone RP11-383F12 on ch...
40
7.8
26 emb|AL137017.9| Human DNA sequence from clone RP11-120J1 on chro...
40
7.8
27 gb|DQ455242.1| Medicago truncatula cDNA-AFLP fragment BC43M33_17...
40
7.8
28 emb|AL732499.6| Zebrafish DNA sequence from clone RP71-1C3 in li...
40
7.8
29 emb|AL596117.19| Mouse DNA sequence from clone RP23-326P7 on chr...
40
7.8
30 emb|AJ245811.1|RSO245811 Ralstonia solanacearum DNA for hrp gene...
40
7.8
31 emb|CR933735.5| Mouse DNA sequence from clone DN-199E5 on chromo...
40
7.8
32 gb|DQ417654.1| Medicago sativa mitogen-activated protein kinase ...
40
7.8
33 dbj|AK153866.1| Mus musculus 2 days neonate thymus thymic cells ...
40
7.8
34 gb|AC008343.4|AC008343 Drosophila melanogaster, chromosome 2R, r...
40
7.8
35 ref|XM_220584.1| PREDICTED: Rattus norvegicus similar to hypothe...
40
7.8
36 gb|AC155915.2| Mus musculus 6 BAC RP24-462N21 (Roswell Park Canc...
40
7.8
37 emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl...
40
7.8
38 gb|AE003810.3| Drosophila melanogaster chromosome 2R, section 40...
40
7.8
39 gb|BC110677.1| Mus musculus translocase of inner mitochondrial m...
40
7.8
40 dbj|AB100882.1| Ralstonia solanacearum genes for PopA, PopB, Pop...
40
7.8
41 gb|AF030959.1|AF030959 Drosophila melanogaster metchnikowin prec...
40
7.8
42 dbj|AB026629.1| Ralstonia solanacearum popA1 gene, complete cds
40
7.8
43 dbj|AB032747.1| Ralstonia solanacearum popA-OE gene, complete cds
40
7.8
>dbj|AP008213.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 129 bits (65), Expect = 1e-26
Identities = 113/129 (87%)
Strand = Plus / Plus
Query: 405 ggatggagtctatgaaactgaagaagctccatggcaacctaaaagtggcaggcattctct 464
|||| ||||||||||| || |||||||||||||||||| |||||| ||||||||||||||
Sbjct: 20511731 ggatagagtctatgaagctcaagaagctccatggcaacgtaaaagcggcaggcattctct 20511790
Query: 465 gctgcgtcgccggcgtcactgtgctggccttctacgaggggccaatgttcagatctttcg 524
|||||| |||| ||||| ||||||||||||||| ||||||||||| | |||| |||
Sbjct: 20511791 tctgcgtgaccggagtcaccgtgctggccttctaccaggggccaatgctgggatcgttca 20511850
Query: 525 accatcacc 533
|||||||||
Sbjct: 20511851 accatcacc 20511859
Score = 125 bits (63), Expect = 2e-25
Identities = 132/155 (85%)
Strand = Plus / Minus
Query: 405 ggatggagtctatgaaactgaagaagctccatggcaacctaaaagtggcaggcattctct 464
|||||||||||||||||||||||||| ||||||| || |||||| |||||| ||||| |
Sbjct: 20340917 ggatggagtctatgaaactgaagaagttccatggaaatgtaaaagcggcaggtattctgt 20340858
Query: 465 gctgcgtcgccggcgtcactgtgctggccttctacgaggggccaatgttcagatctttcg 524
|||| ||||||| ||||| | ||||||||||||||||||||||||||| ||| |||
Sbjct: 20340857 tctgcatcgccggtgtcacaattttggccttctacgaggggccaatgttcaaatcgttca 20340798
Query: 525 accatcaccggctcttccaacacggcagcggcagc 559
||||||||| ||||| || || |||||| |||||
Sbjct: 20340797 accatcaccacctctttcagcaaggcagcagcagc 20340763
Score = 97.6 bits (49), Expect = 4e-17
Identities = 106/125 (84%)
Strand = Plus / Minus
Query: 83 gttctcatcagggtcatgtactccggcatgcatatcatgagcaagatagcgctggatcaa 142
||||| |||||| |||||||||| || |||||| | ||||||||||| || ||||||||
Sbjct: 20342077 gttctgatcaggatcatgtactctggtatgcatgtgatgagcaagatcgccttggatcaa 20342018
Query: 143 ggcatgaaccccttcgtcttcgtattctaccggcataccaccgctgcccttgtgctcatc 202
|||||||||||||| || || | ||||| ||||||||||| ||||| || ||||| |||
Sbjct: 20342017 ggcatgaaccccttggtgtttctgttctatcggcataccactgctgcactcgtgctgatc 20341958
Query: 203 cctat 207
|||||
Sbjct: 20341957 cctat 20341953
Score = 81.8 bits (41), Expect = 2e-12
Identities = 83/97 (85%)
Strand = Plus / Minus
Query: 288 gggtaacagcttgtggcgtcttattcaaccttggtctcaactatgcatccgcgacatcat 347
|||| ||||||||||||| |||||| |||||||||||||| ||| | || || ||||||
Sbjct: 20341251 gggtgacagcttgtggcgacttatttaaccttggtctcaattatacttcggcagcatcat 20341192
Query: 348 cgtcggcgttgtacaatgttcaaccggtggttacctt 384
| || || |||||||| |||||||| |||||||||||
Sbjct: 20341191 catcagcattgtacaacgttcaaccagtggttacctt 20341155
Score = 73.8 bits (37), Expect = 6e-10
Identities = 79/93 (84%)
Strand = Plus / Plus
Query: 314 aaccttggtctcaactatgcatccgcgacatcatcgtcggcgttgtacaatgttcaaccg 373
||||||||||| || ||||| || || || ||||| || || |||||||||||||||||
Sbjct: 20532125 aaccttggtctgaattatgcttcagcaacttcatcatcagcattgtacaatgttcaacca 20532184
Query: 374 gtggttaccttcattctggcggtcataattggg 406
|||||||||||||| || || |||||| |||||
Sbjct: 20532185 gtggttaccttcatccttgcagtcatatttggg 20532217
Score = 63.9 bits (32), Expect = 5e-07
Identities = 116/144 (80%)
Strand = Plus / Plus
Query: 83 gttctcatcagggtcatgtactccggcatgcatatcatgagcaagatagcgctggatcaa 142
||||| |||||| |||||||||| | ||||| || |||||||| | || ||||||||
Sbjct: 20530643 gttctgatcaggatcatgtactcggttatgcaagtcgtgagcaaggttgccttggatcaa 20530702
Query: 143 ggcatgaaccccttcgtcttcgtattctaccggcataccaccgctgcccttgtgctcatc 202
||||||| ||| || || || ||||||| ||||||||| | |||||||| ||| | |||
Sbjct: 20530703 ggcatgagcccgttggtgtttatattctatcggcataccgctgctgccctcgtgttgatc 20530762
Query: 203 cctatcgcctttgctctggagagg 226
||||| || |||| ||| ||||||
Sbjct: 20530763 cctattgcttttgttctagagagg 20530786
Score = 63.9 bits (32), Expect = 5e-07
Identities = 80/96 (83%)
Strand = Plus / Plus
Query: 83 gttctcatcagggtcatgtactccggcatgcatatcatgagcaagatagcgctggatcaa 142
||||| |||||| |||||||||| || ||||| ||||||||||| | || ||||||||
Sbjct: 20509012 gttctgatcaggctcatgtactctggtatgcacgtcatgagcaaggtcgccttggatcaa 20509071
Query: 143 ggcatgaaccccttcgtcttcgtattctaccggcat 178
||||||| ||| ||||| || || ||||| ||||||
Sbjct: 20509072 ggcatgagccctttcgtgtttgtgttctatcggcat 20509107
Score = 56.0 bits (28), Expect = 1e-04
Identities = 121/152 (79%)
Strand = Plus / Plus
Query: 408 tggagtctatgaaactgaagaagctccatggcaacctaaaagtggcaggcattctctgct 467
||||||||||||||||||||| ||||||| | ||||| ||| || ||||| | ||
Sbjct: 20532381 tggagtctatgaaactgaagagattccatggacatgtaaaatcggctggtattctgttct 20532440
Query: 468 gcgtcgccggcgtcactgtgctggccttctacgaggggccaatgttcagatctttcgacc 527
|| | | ||| |||| ||| |||||||||| |||||||| ||||||| ||| ||| |||
Sbjct: 20532441 gcattggcggagtcatcgtgttggccttctatgaggggcctatgttcaaatcattcaacc 20532500
Query: 528 atcaccggctcttccaacacggcagcggcagc 559
|||||| ||||| || || |||||| |||||
Sbjct: 20532501 atcaccacctctttcagcaaggcagcagcagc 20532532
Score = 48.1 bits (24), Expect = 0.032
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 234 ctaaacctgtgacgttgaagattgcaggcaagatgttcgtgcacgccttatatggg 289
||||||| |||||||| || |||||||| || ||||| || || ||||||||||||
Sbjct: 20341831 ctaaaccggtgacgttaaaaattgcagggaaaatgtttgtacatgccttatatggg 20341776
>dbj|AP005169.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OSJNBa0077J18
Length = 180944
Score = 129 bits (65), Expect = 1e-26
Identities = 113/129 (87%)
Strand = Plus / Plus
Query: 405 ggatggagtctatgaaactgaagaagctccatggcaacctaaaagtggcaggcattctct 464
|||| ||||||||||| || |||||||||||||||||| |||||| ||||||||||||||
Sbjct: 92841 ggatagagtctatgaagctcaagaagctccatggcaacgtaaaagcggcaggcattctct 92900
Query: 465 gctgcgtcgccggcgtcactgtgctggccttctacgaggggccaatgttcagatctttcg 524
|||||| |||| ||||| ||||||||||||||| ||||||||||| | |||| |||
Sbjct: 92901 tctgcgtgaccggagtcaccgtgctggccttctaccaggggccaatgctgggatcgttca 92960
Query: 525 accatcacc 533
|||||||||
Sbjct: 92961 accatcacc 92969
Score = 73.8 bits (37), Expect = 6e-10
Identities = 79/93 (84%)
Strand = Plus / Plus
Query: 314 aaccttggtctcaactatgcatccgcgacatcatcgtcggcgttgtacaatgttcaaccg 373
||||||||||| || ||||| || || || ||||| || || |||||||||||||||||
Sbjct: 113235 aaccttggtctgaattatgcttcagcaacttcatcatcagcattgtacaatgttcaacca 113294
Query: 374 gtggttaccttcattctggcggtcataattggg 406
|||||||||||||| || || |||||| |||||
Sbjct: 113295 gtggttaccttcatccttgcagtcatatttggg 113327
Score = 63.9 bits (32), Expect = 5e-07
Identities = 116/144 (80%)
Strand = Plus / Plus
Query: 83 gttctcatcagggtcatgtactccggcatgcatatcatgagcaagatagcgctggatcaa 142
||||| |||||| |||||||||| | ||||| || |||||||| | || ||||||||
Sbjct: 111753 gttctgatcaggatcatgtactcggttatgcaagtcgtgagcaaggttgccttggatcaa 111812
Query: 143 ggcatgaaccccttcgtcttcgtattctaccggcataccaccgctgcccttgtgctcatc 202
||||||| ||| || || || ||||||| ||||||||| | |||||||| ||| | |||
Sbjct: 111813 ggcatgagcccgttggtgtttatattctatcggcataccgctgctgccctcgtgttgatc 111872
Query: 203 cctatcgcctttgctctggagagg 226
||||| || |||| ||| ||||||
Sbjct: 111873 cctattgcttttgttctagagagg 111896
Score = 63.9 bits (32), Expect = 5e-07
Identities = 80/96 (83%)
Strand = Plus / Plus
Query: 83 gttctcatcagggtcatgtactccggcatgcatatcatgagcaagatagcgctggatcaa 142
||||| |||||| |||||||||| || ||||| ||||||||||| | || ||||||||
Sbjct: 90122 gttctgatcaggctcatgtactctggtatgcacgtcatgagcaaggtcgccttggatcaa 90181
Query: 143 ggcatgaaccccttcgtcttcgtattctaccggcat 178
||||||| ||| ||||| || || ||||| ||||||
Sbjct: 90182 ggcatgagccctttcgtgtttgtgttctatcggcat 90217
Score = 56.0 bits (28), Expect = 1e-04
Identities = 121/152 (79%)
Strand = Plus / Plus
Query: 408 tggagtctatgaaactgaagaagctccatggcaacctaaaagtggcaggcattctctgct 467
||||||||||||||||||||| ||||||| | ||||| ||| || ||||| | ||
Sbjct: 113491 tggagtctatgaaactgaagagattccatggacatgtaaaatcggctggtattctgttct 113550
Query: 468 gcgtcgccggcgtcactgtgctggccttctacgaggggccaatgttcagatctttcgacc 527
|| | | ||| |||| ||| |||||||||| |||||||| ||||||| ||| ||| |||
Sbjct: 113551 gcattggcggagtcatcgtgttggccttctatgaggggcctatgttcaaatcattcaacc 113610
Query: 528 atcaccggctcttccaacacggcagcggcagc 559
|||||| ||||| || || |||||| |||||
Sbjct: 113611 atcaccacctctttcagcaaggcagcagcagc 113642
>dbj|AP004990.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OSJNBa0007H12
Length = 150881
Score = 129 bits (65), Expect = 1e-26
Identities = 113/129 (87%)
Strand = Plus / Plus
Query: 405 ggatggagtctatgaaactgaagaagctccatggcaacctaaaagtggcaggcattctct 464
|||| ||||||||||| || |||||||||||||||||| |||||| ||||||||||||||
Sbjct: 2810 ggatagagtctatgaagctcaagaagctccatggcaacgtaaaagcggcaggcattctct 2869
Query: 465 gctgcgtcgccggcgtcactgtgctggccttctacgaggggccaatgttcagatctttcg 524
|||||| |||| ||||| ||||||||||||||| ||||||||||| | |||| |||
Sbjct: 2870 tctgcgtgaccggagtcaccgtgctggccttctaccaggggccaatgctgggatcgttca 2929
Query: 525 accatcacc 533
|||||||||
Sbjct: 2930 accatcacc 2938
Score = 73.8 bits (37), Expect = 6e-10
Identities = 79/93 (84%)
Strand = Plus / Plus
Query: 314 aaccttggtctcaactatgcatccgcgacatcatcgtcggcgttgtacaatgttcaaccg 373
||||||||||| || ||||| || || || ||||| || || |||||||||||||||||
Sbjct: 23204 aaccttggtctgaattatgcttcagcaacttcatcatcagcattgtacaatgttcaacca 23263
Query: 374 gtggttaccttcattctggcggtcataattggg 406
|||||||||||||| || || |||||| |||||
Sbjct: 23264 gtggttaccttcatccttgcagtcatatttggg 23296
Score = 63.9 bits (32), Expect = 5e-07
Identities = 116/144 (80%)
Strand = Plus / Plus
Query: 83 gttctcatcagggtcatgtactccggcatgcatatcatgagcaagatagcgctggatcaa 142
||||| |||||| |||||||||| | ||||| || |||||||| | || ||||||||
Sbjct: 21722 gttctgatcaggatcatgtactcggttatgcaagtcgtgagcaaggttgccttggatcaa 21781
Query: 143 ggcatgaaccccttcgtcttcgtattctaccggcataccaccgctgcccttgtgctcatc 202
||||||| ||| || || || ||||||| ||||||||| | |||||||| ||| | |||
Sbjct: 21782 ggcatgagcccgttggtgtttatattctatcggcataccgctgctgccctcgtgttgatc 21841
Query: 203 cctatcgcctttgctctggagagg 226
||||| || |||| ||| ||||||
Sbjct: 21842 cctattgcttttgttctagagagg 21865
Score = 63.9 bits (32), Expect = 5e-07
Identities = 80/96 (83%)
Strand = Plus / Plus
Query: 83 gttctcatcagggtcatgtactccggcatgcatatcatgagcaagatagcgctggatcaa 142
||||| |||||| |||||||||| || ||||| ||||||||||| | || ||||||||
Sbjct: 91 gttctgatcaggctcatgtactctggtatgcacgtcatgagcaaggtcgccttggatcaa 150
Query: 143 ggcatgaaccccttcgtcttcgtattctaccggcat 178
||||||| ||| ||||| || || ||||| ||||||
Sbjct: 151 ggcatgagccctttcgtgtttgtgttctatcggcat 186
Score = 56.0 bits (28), Expect = 1e-04
Identities = 121/152 (79%)
Strand = Plus / Plus
Query: 408 tggagtctatgaaactgaagaagctccatggcaacctaaaagtggcaggcattctctgct 467
||||||||||||||||||||| ||||||| | ||||| ||| || ||||| | ||
Sbjct: 23460 tggagtctatgaaactgaagagattccatggacatgtaaaatcggctggtattctgttct 23519
Query: 468 gcgtcgccggcgtcactgtgctggccttctacgaggggccaatgttcagatctttcgacc 527
|| | | ||| |||| ||| |||||||||| |||||||| ||||||| ||| ||| |||
Sbjct: 23520 gcattggcggagtcatcgtgttggccttctatgaggggcctatgttcaaatcattcaacc 23579
Query: 528 atcaccggctcttccaacacggcagcggcagc 559
|||||| ||||| || || |||||| |||||
Sbjct: 23580 atcaccacctctttcagcaaggcagcagcagc 23611
>dbj|AP005105.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OSJNBb0052O11
Length = 106467
Score = 125 bits (63), Expect = 2e-25
Identities = 132/155 (85%)
Strand = Plus / Minus
Query: 405 ggatggagtctatgaaactgaagaagctccatggcaacctaaaagtggcaggcattctct 464
|||||||||||||||||||||||||| ||||||| || |||||| |||||| ||||| |
Sbjct: 83528 ggatggagtctatgaaactgaagaagttccatggaaatgtaaaagcggcaggtattctgt 83469
Query: 465 gctgcgtcgccggcgtcactgtgctggccttctacgaggggccaatgttcagatctttcg 524
|||| ||||||| ||||| | ||||||||||||||||||||||||||| ||| |||
Sbjct: 83468 tctgcatcgccggtgtcacaattttggccttctacgaggggccaatgttcaaatcgttca 83409
Query: 525 accatcaccggctcttccaacacggcagcggcagc 559
||||||||| ||||| || || |||||| |||||
Sbjct: 83408 accatcaccacctctttcagcaaggcagcagcagc 83374
Score = 97.6 bits (49), Expect = 4e-17
Identities = 106/125 (84%)
Strand = Plus / Minus
Query: 83 gttctcatcagggtcatgtactccggcatgcatatcatgagcaagatagcgctggatcaa 142
||||| |||||| |||||||||| || |||||| | ||||||||||| || ||||||||
Sbjct: 84688 gttctgatcaggatcatgtactctggtatgcatgtgatgagcaagatcgccttggatcaa 84629
Query: 143 ggcatgaaccccttcgtcttcgtattctaccggcataccaccgctgcccttgtgctcatc 202
|||||||||||||| || || | ||||| ||||||||||| ||||| || ||||| |||
Sbjct: 84628 ggcatgaaccccttggtgtttctgttctatcggcataccactgctgcactcgtgctgatc 84569
Query: 203 cctat 207
|||||
Sbjct: 84568 cctat 84564
Score = 81.8 bits (41), Expect = 2e-12
Identities = 83/97 (85%)
Strand = Plus / Minus
Query: 288 gggtaacagcttgtggcgtcttattcaaccttggtctcaactatgcatccgcgacatcat 347
|||| ||||||||||||| |||||| |||||||||||||| ||| | || || ||||||
Sbjct: 83862 gggtgacagcttgtggcgacttatttaaccttggtctcaattatacttcggcagcatcat 83803
Query: 348 cgtcggcgttgtacaatgttcaaccggtggttacctt 384
| || || |||||||| |||||||| |||||||||||
Sbjct: 83802 catcagcattgtacaacgttcaaccagtggttacctt 83766
Score = 48.1 bits (24), Expect = 0.032
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 234 ctaaacctgtgacgttgaagattgcaggcaagatgttcgtgcacgccttatatggg 289
||||||| |||||||| || |||||||| || ||||| || || ||||||||||||
Sbjct: 84442 ctaaaccggtgacgttaaaaattgcagggaaaatgtttgtacatgccttatatggg 84387
>dbj|AP004573.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0678G09
Length = 139220
Score = 125 bits (63), Expect = 2e-25
Identities = 132/155 (85%)
Strand = Plus / Minus
Query: 405 ggatggagtctatgaaactgaagaagctccatggcaacctaaaagtggcaggcattctct 464
|||||||||||||||||||||||||| ||||||| || |||||| |||||| ||||| |
Sbjct: 49817 ggatggagtctatgaaactgaagaagttccatggaaatgtaaaagcggcaggtattctgt 49758
Query: 465 gctgcgtcgccggcgtcactgtgctggccttctacgaggggccaatgttcagatctttcg 524
|||| ||||||| ||||| | ||||||||||||||||||||||||||| ||| |||
Sbjct: 49757 tctgcatcgccggtgtcacaattttggccttctacgaggggccaatgttcaaatcgttca 49698
Query: 525 accatcaccggctcttccaacacggcagcggcagc 559
||||||||| ||||| || || |||||| |||||
Sbjct: 49697 accatcaccacctctttcagcaaggcagcagcagc 49663
Score = 97.6 bits (49), Expect = 4e-17
Identities = 106/125 (84%)
Strand = Plus / Minus
Query: 83 gttctcatcagggtcatgtactccggcatgcatatcatgagcaagatagcgctggatcaa 142
||||| |||||| |||||||||| || |||||| | ||||||||||| || ||||||||
Sbjct: 50977 gttctgatcaggatcatgtactctggtatgcatgtgatgagcaagatcgccttggatcaa 50918
Query: 143 ggcatgaaccccttcgtcttcgtattctaccggcataccaccgctgcccttgtgctcatc 202
|||||||||||||| || || | ||||| ||||||||||| ||||| || ||||| |||
Sbjct: 50917 ggcatgaaccccttggtgtttctgttctatcggcataccactgctgcactcgtgctgatc 50858
Query: 203 cctat 207
|||||
Sbjct: 50857 cctat 50853
Score = 81.8 bits (41), Expect = 2e-12
Identities = 83/97 (85%)
Strand = Plus / Minus
Query: 288 gggtaacagcttgtggcgtcttattcaaccttggtctcaactatgcatccgcgacatcat 347
|||| ||||||||||||| |||||| |||||||||||||| ||| | || || ||||||
Sbjct: 50151 gggtgacagcttgtggcgacttatttaaccttggtctcaattatacttcggcagcatcat 50092
Query: 348 cgtcggcgttgtacaatgttcaaccggtggttacctt 384
| || || |||||||| |||||||| |||||||||||
Sbjct: 50091 catcagcattgtacaacgttcaaccagtggttacctt 50055
Score = 48.1 bits (24), Expect = 0.032
Identities = 48/56 (85%)
Strand = Plus / Minus
Query: 234 ctaaacctgtgacgttgaagattgcaggcaagatgttcgtgcacgccttatatggg 289
||||||| |||||||| || |||||||| || ||||| || || ||||||||||||
Sbjct: 50731 ctaaaccggtgacgttaaaaattgcagggaaaatgtttgtacatgccttatatggg 50676
>emb|AL596117.19 | Mouse DNA sequence from clone RP23-326P7 on chromosome 11 Contains the
Gp1ba gene for glycoprotein 1b alpha polypeptide, the
Slc25a11 gene for solute carrier family 25 (mitochondrial
carrier; oxoglutarate carrier) member 11, the gene for a
novel PA domain and C3HC4 type zinc finger (RING finger)
containing protein, the Pfn1 gene for profilin 1, five
novel genes, the Eno3 gene for muscle enolase 3 beta, the
Spag7 gene for sperm associated antigen 7, the Kif1c gene
for kinesin family member 1C, a ribosomal protein 37A
(Rpl37a) pseudogene, the gene for a novel zinc finger
protein and six CpG islands, complete sequence
Length = 207086
Score = 40.1 bits (20), Expect = 7.8
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 23 aaaacacttgcaaaaatcag 42
||||||||||||||||||||
Sbjct: 143954 aaaacacttgcaaaaatcag 143973
>dbj|AB032747.1 | Ralstonia solanacearum popA-OE gene, complete cds
Length = 1085
Score = 40.1 bits (20), Expect = 7.8
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 45 tgggtggtgccaacggcgccaagg 68
|||| |||||||||||||||||||
Sbjct: 490 tgggcggtgccaacggcgccaagg 513
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,057,263
Number of Sequences: 3902068
Number of extensions: 4057263
Number of successful extensions: 76887
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 76752
Number of HSP's gapped (non-prelim): 135
length of query: 574
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 551
effective length of database: 17,143,297,704
effective search space: 9445957034904
effective search space used: 9445957034904
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)