ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart56e03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CHIT2_TULBA (Q7M443) Chitinase 2 (EC 3.2.1.14) (Tulip bulb chiti... 129 3e-30
2CHIT1_TULBA (Q9SLP4) Chitinase 1 precursor (EC 3.2.1.14) (Tulip ... 124 1e-28
3RUAP_SOYBN (P39657) RuBisCO-associated protein 34 0.19
4SRC_AVIS2 (P15054) Tyrosine-protein kinase transforming protein ... 32 1.2
5WNK4_MOUSE (Q80UE6) Serine/threonine-protein kinase WNK4 (EC 2.7... 30 4.7
6ADH1_DROMU (P07161) Alcohol dehydrogenase 1 (EC 1.1.1.1) 30 4.7
7ADH1_DROMO (P09370) Alcohol dehydrogenase 1 (EC 1.1.1.1) 30 4.7
8MRAZ_THICR (Q31I69) Protein mraZ 29 6.2
9WNK4_RAT (Q7TPK6) Serine/threonine-protein kinase WNK4 (EC 2.7.1... 29 6.2
10Y43R_IRV6 (P18305) Hypothetical protein 443R 29 8.1

>CHIT2_TULBA (Q7M443) Chitinase 2 (EC 3.2.1.14) (Tulip bulb chitinase-2) (TBC-2)|
          Length = 275

 Score =  129 bits (325), Expect = 3e-30
 Identities = 66/110 (60%), Positives = 80/110 (72%)
 Frame = +1

Query: 172 LFRDYIGALYNGVRFADVPINPRARFDFILAFVIDYTTATEPPTPTNGRFNVFWQDTVLT 351
           LFR+YIGA +N V+F+DVPINP   F FILAF IDYT+ + P TPTNG FN FW    L+
Sbjct: 2   LFREYIGAQFNDVKFSDVPINPNVDFHFILAFAIDYTSGSSP-TPTNGNFNPFWDTNNLS 60

Query: 352 PAAIAEVKRRNPNVRVAVSLGGATVNGRPVFFNATSGVDSWVRNAVDSLT 501
           P+ +A +KR   NV+V+VSLGG +V G  VFFN +S V SWV NAV SLT
Sbjct: 61  PSQVAAIKRTYNNVKVSVSLGGNSVGGERVFFNPSS-VSSWVDNAVSSLT 109



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>CHIT1_TULBA (Q9SLP4) Chitinase 1 precursor (EC 3.2.1.14) (Tulip bulb|
           chitinase-1) (TBC-1)
          Length = 314

 Score =  124 bits (312), Expect = 1e-28
 Identities = 62/110 (56%), Positives = 81/110 (73%)
 Frame = +1

Query: 172 LFRDYIGALYNGVRFADVPINPRARFDFILAFVIDYTTATEPPTPTNGRFNVFWQDTVLT 351
           +FR+YIG+ +N V+F+DVPINP   F FILAF IDYT+ + P TPTNG F  FW    L+
Sbjct: 28  VFREYIGSQFNDVKFSDVPINPDVDFHFILAFAIDYTSGSSP-TPTNGNFKPFWDTNNLS 86

Query: 352 PAAIAEVKRRNPNVRVAVSLGGATVNGRPVFFNATSGVDSWVRNAVDSLT 501
           P+ +A VKR + NV+V++SLGG +V G+ VFF+ +S V SWV NAV SLT
Sbjct: 87  PSQVAAVKRTHSNVKVSLSLGGDSVGGKNVFFSPSS-VSSWVENAVSSLT 135



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>RUAP_SOYBN (P39657) RuBisCO-associated protein|
          Length = 283

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
 Frame = +1

Query: 247 FDFILAFVIDYTTATEPPTPTNGRFNVFWQDTVLTPAAIAEVKRRNP----NVRVAVSLG 414
           F   L+   DY    +    TNG+F  +W    +TP  I + K++       V+V VS+G
Sbjct: 29  FQVTLSLARDY----DGNNSTNGKFIPYWDTEKVTPEVIKKFKKKYEPTALRVKVLVSIG 84

Query: 415 GATVNGRPVFFNATSGVDSWVRNAVDSL 498
                  P    + S  ++WV  A  SL
Sbjct: 85  NKN-KQFPFTIGSDSNSEAWVSEATASL 111



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>SRC_AVIS2 (P15054) Tyrosine-protein kinase transforming protein Src (EC|
           2.7.10.2) (p60-Src) (v-Src) (pp60v-src)
          Length = 586

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +1

Query: 238 RARFDFILAFVIDYTTATEPPTP 306
           R  F+++ AF+ DY T+TEPP P
Sbjct: 505 RPTFEYLQAFLEDYFTSTEPPVP 527



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>WNK4_MOUSE (Q80UE6) Serine/threonine-protein kinase WNK4 (EC 2.7.11.1) (Protein|
            kinase with no lysine 4) (Protein kinase,
            lysine-deficient 4)
          Length = 1222

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 18/52 (34%), Positives = 24/52 (46%)
 Frame = -2

Query: 491  STALRTQESTPEVALKNTGLPLTVAPPRLTATRTFGFRRLTSAIAAGVSTVS 336
            S  L    S P+  L  T LP+  +PP L +T       L SA +  V TV+
Sbjct: 869  SAPLPFSPSYPQDPLSPTSLPVCPSPPSLPSTTAAPLLSLASAFSLAVMTVA 920



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>ADH1_DROMU (P07161) Alcohol dehydrogenase 1 (EC 1.1.1.1)|
          Length = 253

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 15/30 (50%), Positives = 19/30 (63%)
 Frame = +1

Query: 310 NGRFNVFWQDTVLTPAAIAEVKRRNPNVRV 399
           +G  N+   D +  PAAIAE+K  NPNV V
Sbjct: 27  SGPKNLVILDRIENPAAIAELKALNPNVTV 56



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>ADH1_DROMO (P09370) Alcohol dehydrogenase 1 (EC 1.1.1.1)|
          Length = 253

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = +1

Query: 313 GRFNVFWQDTVLTPAAIAEVKRRNPNVRVAVSLGGATVN 429
           G  N+   D +  PAAIAE+K  NP V V   L   TV+
Sbjct: 28  GPKNLVILDRIENPAAIAELKALNPKVTVTFYLYDVTVS 66



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>MRAZ_THICR (Q31I69) Protein mraZ|
          Length = 152

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +3

Query: 300 DPDQRPVQRLLAGHGAHPRRDRRGQAAEPERAR 398
           DP  R VQRLL GH +    D +G+   P   R
Sbjct: 69  DPQARLVQRLLLGHASEMEMDGQGRVLLPSLLR 101



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>WNK4_RAT (Q7TPK6) Serine/threonine-protein kinase WNK4 (EC 2.7.11.1) (Protein|
            kinase with no lysine 4) (Protein kinase,
            lysine-deficient 4)
          Length = 1222

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 18/52 (34%), Positives = 24/52 (46%)
 Frame = -2

Query: 491  STALRTQESTPEVALKNTGLPLTVAPPRLTATRTFGFRRLTSAIAAGVSTVS 336
            S+ L    S P+V L    LP   +PP L +T       L SA +  V TV+
Sbjct: 869  SSPLPFSPSYPQVPLHPASLPTCPSPPPLPSTTAAPLLSLASAFSLAVMTVA 920



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>Y43R_IRV6 (P18305) Hypothetical protein 443R|
          Length = 2432

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +1

Query: 274 DYTTATEPPTPTNGRFNVFWQDTVLTPAAIAEV 372
           DY T T+PPT   G  N  + D  +TP A   V
Sbjct: 355 DYITITDPPTVGTGAANKAYVDANITPNATPTV 387


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,306,227
Number of Sequences: 219361
Number of extensions: 965749
Number of successful extensions: 3796
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3791
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3581144924
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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