ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart56a07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_197413.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBb0028C01.26), mRNA Length = 1307 Score = 236 bits (119), Expect = 7e-59 Identities = 146/155 (94%) Strand = Plus / Plus Query: 269 gcgggcctgggcgacctgccggagctctgcgccgcgcaggtgctgctccggctcgacgcg 328 ||||| |||||||||||||||||||| ||||| ||| ||||||||||||||||||||||| Sbjct: 309 gcgggtctgggcgacctgccggagctgtgcgcggcggaggtgctgctccggctcgacgcg 368 Query: 329 ccggagatctgccgcctcgcgcggctcaaccacgcgttccgcggcgccgcgggggcagac 388 |||||||||||||| |||||||||||||||||||||||||||||||| || ||||| || Sbjct: 369 ccggagatctgccggctcgcgcggctcaaccacgcgttccgcggcgcggccggggcggat 428 Query: 389 ttcgtgtgggaggccaagctgccggagaactaccg 423 ||||||||||||||||||||||||||||||||||| Sbjct: 429 ttcgtgtgggaggccaagctgccggagaactaccg 463 Score = 69.9 bits (35), Expect = 9e-09 Identities = 86/103 (83%) Strand = Plus / Plus Query: 491 aaggagatctacgccaggctctccaggcccgtctctttcgacgacggcaccaaggaattt 550 |||||||||||||| ||||| | ||||| || | ||||| | |||| | ||||| || Sbjct: 549 aaggagatctacgcgaggctggctaggcctgtgcccttcgatggcggctcaaaggagttc 608 Query: 551 tggctagagaagagcaaaggtagggtttgtatggcgctatcct 593 ||||| |||||||||||||| |||||||| ||||||||||||| Sbjct: 609 tggctggagaagagcaaaggcagggtttgcatggcgctatcct 651
>gb|AC079029.11| Oryza sativa chromosome 10 BAC OSJNBb0028C01 genomic sequence, complete sequence Length = 137366 Score = 236 bits (119), Expect = 7e-59 Identities = 146/155 (94%) Strand = Plus / Minus Query: 269 gcgggcctgggcgacctgccggagctctgcgccgcgcaggtgctgctccggctcgacgcg 328 ||||| |||||||||||||||||||| ||||| ||| ||||||||||||||||||||||| Sbjct: 44195 gcgggtctgggcgacctgccggagctgtgcgcggcggaggtgctgctccggctcgacgcg 44136 Query: 329 ccggagatctgccgcctcgcgcggctcaaccacgcgttccgcggcgccgcgggggcagac 388 |||||||||||||| |||||||||||||||||||||||||||||||| || ||||| || Sbjct: 44135 ccggagatctgccggctcgcgcggctcaaccacgcgttccgcggcgcggccggggcggat 44076 Query: 389 ttcgtgtgggaggccaagctgccggagaactaccg 423 ||||||||||||||||||||||||||||||||||| Sbjct: 44075 ttcgtgtgggaggccaagctgccggagaactaccg 44041 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 551 tggctagagaagagcaaaggtagggtttgtatggcgctatcct 593 ||||| |||||||||||||| |||||||| ||||||||||||| Sbjct: 43502 tggctggagaagagcaaaggcagggtttgcatggcgctatcct 43460
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 236 bits (119), Expect = 7e-59 Identities = 146/155 (94%) Strand = Plus / Plus Query: 269 gcgggcctgggcgacctgccggagctctgcgccgcgcaggtgctgctccggctcgacgcg 328 ||||| |||||||||||||||||||| ||||| ||| ||||||||||||||||||||||| Sbjct: 19733317 gcgggtctgggcgacctgccggagctgtgcgcggcggaggtgctgctccggctcgacgcg 19733376 Query: 329 ccggagatctgccgcctcgcgcggctcaaccacgcgttccgcggcgccgcgggggcagac 388 |||||||||||||| |||||||||||||||||||||||||||||||| || ||||| || Sbjct: 19733377 ccggagatctgccggctcgcgcggctcaaccacgcgttccgcggcgcggccggggcggat 19733436 Query: 389 ttcgtgtgggaggccaagctgccggagaactaccg 423 ||||||||||||||||||||||||||||||||||| Sbjct: 19733437 ttcgtgtgggaggccaagctgccggagaactaccg 19733471 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 551 tggctagagaagagcaaaggtagggtttgtatggcgctatcct 593 ||||| |||||||||||||| |||||||| ||||||||||||| Sbjct: 19734010 tggctggagaagagcaaaggcagggtttgcatggcgctatcct 19734052
>dbj|AK071847.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120I24, full insert sequence Length = 994 Score = 236 bits (119), Expect = 7e-59 Identities = 146/155 (94%) Strand = Plus / Plus Query: 269 gcgggcctgggcgacctgccggagctctgcgccgcgcaggtgctgctccggctcgacgcg 328 ||||| |||||||||||||||||||| ||||| ||| ||||||||||||||||||||||| Sbjct: 301 gcgggtctgggcgacctgccggagctgtgcgcggcggaggtgctgctccggctcgacgcg 360 Query: 329 ccggagatctgccgcctcgcgcggctcaaccacgcgttccgcggcgccgcgggggcagac 388 |||||||||||||| |||||||||||||||||||||||||||||||| || ||||| || Sbjct: 361 ccggagatctgccggctcgcgcggctcaaccacgcgttccgcggcgcggccggggcggat 420 Query: 389 ttcgtgtgggaggccaagctgccggagaactaccg 423 ||||||||||||||||||||||||||||||||||| Sbjct: 421 ttcgtgtgggaggccaagctgccggagaactaccg 455 Score = 69.9 bits (35), Expect = 9e-09 Identities = 86/103 (83%) Strand = Plus / Plus Query: 491 aaggagatctacgccaggctctccaggcccgtctctttcgacgacggcaccaaggaattt 550 |||||||||||||| ||||| | ||||| || | ||||| | |||| | ||||| || Sbjct: 541 aaggagatctacgcgaggctggctaggcctgtgcccttcgatggcggctcaaaggagttc 600 Query: 551 tggctagagaagagcaaaggtagggtttgtatggcgctatcct 593 ||||| |||||||||||||| |||||||| ||||||||||||| Sbjct: 601 tggctggagaagagcaaaggcagggtttgcatggcgctatcct 643
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 236 bits (119), Expect = 7e-59 Identities = 146/155 (94%) Strand = Plus / Plus Query: 269 gcgggcctgggcgacctgccggagctctgcgccgcgcaggtgctgctccggctcgacgcg 328 ||||| |||||||||||||||||||| ||||| ||| ||||||||||||||||||||||| Sbjct: 19744593 gcgggtctgggcgacctgccggagctgtgcgcggcggaggtgctgctccggctcgacgcg 19744652 Query: 329 ccggagatctgccgcctcgcgcggctcaaccacgcgttccgcggcgccgcgggggcagac 388 |||||||||||||| |||||||||||||||||||||||||||||||| || ||||| || Sbjct: 19744653 ccggagatctgccggctcgcgcggctcaaccacgcgttccgcggcgcggccggggcggat 19744712 Query: 389 ttcgtgtgggaggccaagctgccggagaactaccg 423 ||||||||||||||||||||||||||||||||||| Sbjct: 19744713 ttcgtgtgggaggccaagctgccggagaactaccg 19744747 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 551 tggctagagaagagcaaaggtagggtttgtatggcgctatcct 593 ||||| |||||||||||||| |||||||| ||||||||||||| Sbjct: 19745286 tggctggagaagagcaaaggcagggtttgcatggcgctatcct 19745328
>gb|AC134236.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0056G13, complete sequence Length = 148011 Score = 165 bits (83), Expect = 2e-37 Identities = 128/143 (89%) Strand = Plus / Plus Query: 275 ctgggcgacctgccggagctctgcgccgcgcaggtgctgctccggctcgacgcgccggag 334 |||||||| ||||||||||| |||||||| |||||||||| | || |||||||||||| Sbjct: 78116 ctgggcgagctgccggagctgtgcgccgccgaggtgctgctgcacctggacgcgccggag 78175 Query: 335 atctgccgcctcgcgcggctcaaccacgcgttccgcggcgccgcgggggcagacttcgtg 394 || ||||| |||||||||||||||| |||||||||||||||||||| ||| ||||||||| Sbjct: 78176 atatgccggctcgcgcggctcaaccgcgcgttccgcggcgccgcggcggcggacttcgtg 78235 Query: 395 tgggaggccaagctgccggagaa 417 ||||| || |||||||||||||| Sbjct: 78236 tgggaagcgaagctgccggagaa 78258
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 165 bits (83), Expect = 2e-37 Identities = 128/143 (89%) Strand = Plus / Plus Query: 275 ctgggcgacctgccggagctctgcgccgcgcaggtgctgctccggctcgacgcgccggag 334 |||||||| ||||||||||| |||||||| |||||||||| | || |||||||||||| Sbjct: 922919 ctgggcgagctgccggagctgtgcgccgccgaggtgctgctgcacctggacgcgccggag 922978 Query: 335 atctgccgcctcgcgcggctcaaccacgcgttccgcggcgccgcgggggcagacttcgtg 394 || ||||| |||||||||||||||| |||||||||||||||||||| ||| ||||||||| Sbjct: 922979 atatgccggctcgcgcggctcaaccgcgcgttccgcggcgccgcggcggcggacttcgtg 923038 Query: 395 tgggaggccaagctgccggagaa 417 ||||| || |||||||||||||| Sbjct: 923039 tgggaagcgaagctgccggagaa 923061
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 165 bits (83), Expect = 2e-37 Identities = 128/143 (89%) Strand = Plus / Plus Query: 275 ctgggcgacctgccggagctctgcgccgcgcaggtgctgctccggctcgacgcgccggag 334 |||||||| ||||||||||| |||||||| |||||||||| | || |||||||||||| Sbjct: 922917 ctgggcgagctgccggagctgtgcgccgccgaggtgctgctgcacctggacgcgccggag 922976 Query: 335 atctgccgcctcgcgcggctcaaccacgcgttccgcggcgccgcgggggcagacttcgtg 394 || ||||| |||||||||||||||| |||||||||||||||||||| ||| ||||||||| Sbjct: 922977 atatgccggctcgcgcggctcaaccgcgcgttccgcggcgccgcggcggcggacttcgtg 923036 Query: 395 tgggaggccaagctgccggagaa 417 ||||| || |||||||||||||| Sbjct: 923037 tgggaagcgaagctgccggagaa 923059
>dbj|AK106276.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-H04, full insert sequence Length = 1621 Score = 165 bits (83), Expect = 2e-37 Identities = 128/143 (89%) Strand = Plus / Plus Query: 275 ctgggcgacctgccggagctctgcgccgcgcaggtgctgctccggctcgacgcgccggag 334 |||||||| ||||||||||| |||||||| |||||||||| | || |||||||||||| Sbjct: 499 ctgggcgagctgccggagctgtgcgccgccgaggtgctgctgcacctggacgcgccggag 558 Query: 335 atctgccgcctcgcgcggctcaaccacgcgttccgcggcgccgcgggggcagacttcgtg 394 || ||||| |||||||||||||||| |||||||||||||||||||| ||| ||||||||| Sbjct: 559 atatgccggctcgcgcggctcaaccgcgcgttccgcggcgccgcggcggcggacttcgtg 618 Query: 395 tgggaggccaagctgccggagaa 417 ||||| || |||||||||||||| Sbjct: 619 tgggaagcgaagctgccggagaa 641
>gb|AY106947.1| Zea mays PCO146412 mRNA sequence Length = 1043 Score = 95.6 bits (48), Expect = 2e-16 Identities = 61/64 (95%), Gaps = 1/64 (1%) Strand = Plus / Plus Query: 358 ccacgcgttccgcggcgccgcgggggcagacttcgtgtgggaggccaagctgccggagaa 417 |||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 27 ccacgcgttccg-ggcgccgcgggggctgacttcgtgtgggaagccaagctgccggagaa 85 Query: 418 ctac 421 |||| Sbjct: 86 ctac 89 Score = 48.1 bits (24), Expect = 0.033 Identities = 66/80 (82%) Strand = Plus / Plus Query: 491 aaggagatctacgccaggctctccaggcccgtctctttcgacgacggcaccaaggaattt 550 |||||||||||||| |||||| ||||||| || |||| | |||||||| |||||||| Sbjct: 156 aaggagatctacgcgaggctcgccaggcctgtgccttttggcgacggcaagaaggaattc 215 Query: 551 tggctagagaagagcaaagg 570 ||| | || |||| |||||| Sbjct: 216 tggttggacaagaacaaagg 235
>gb|AY106517.1| Zea mays PCO071075 mRNA sequence Length = 1699 Score = 89.7 bits (45), Expect = 1e-14 Identities = 90/105 (85%) Strand = Plus / Plus Query: 275 ctgggcgacctgccggagctctgcgccgcgcaggtgctgctccggctcgacgcgccggag 334 |||||||||||||||||| ||||| |||| ||||||||||| |||| ||| ||| |||| Sbjct: 593 ctgggcgacctgccggagaactgcgtcgcggaggtgctgctcaggctggacccgctggag 652 Query: 335 atctgccgcctcgcgcggctcaaccacgcgttccgcggcgccgcg 379 |||||||| | |||||||||| || | ||||||| ||||||||| Sbjct: 653 atctgccggatggcgcggctcagccgcacgttccgtggcgccgcg 697
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 83.8 bits (42), Expect = 6e-13 Identities = 114/138 (82%) Strand = Plus / Minus Query: 275 ctgggcgacctgccggagctctgcgccgcgcaggtgctgctccggctcgacgcgccggag 334 ||||| |||||||||||| ||||| ||| ||||||||| | |||| ||| |||||||| Sbjct: 20223504 ctgggggacctgccggagagctgcgtggcggaggtgctgcgcaggctggacccgccggag 20223445 Query: 335 atctgccgcctcgcgcggctcaaccacgcgttccgcggcgccgcgggggcagacttcgtg 394 |||||||| | |||||||||| || | ||||||||||||||||| | ||| ||| Sbjct: 20223444 atctgccggatggcgcggctcagccgcacgttccgcggcgccgcgtccggcgacggcgtc 20223385 Query: 395 tgggaggccaagctgccg 412 |||||||||||||||||| Sbjct: 20223384 tgggaggccaagctgccg 20223367
>dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1439_F07 Length = 153743 Score = 83.8 bits (42), Expect = 6e-13 Identities = 114/138 (82%) Strand = Plus / Minus Query: 275 ctgggcgacctgccggagctctgcgccgcgcaggtgctgctccggctcgacgcgccggag 334 ||||| |||||||||||| ||||| ||| ||||||||| | |||| ||| |||||||| Sbjct: 2631 ctgggggacctgccggagagctgcgtggcggaggtgctgcgcaggctggacccgccggag 2572 Query: 335 atctgccgcctcgcgcggctcaaccacgcgttccgcggcgccgcgggggcagacttcgtg 394 |||||||| | |||||||||| || | ||||||||||||||||| | ||| ||| Sbjct: 2571 atctgccggatggcgcggctcagccgcacgttccgcggcgccgcgtccggcgacggcgtc 2512 Query: 395 tgggaggccaagctgccg 412 |||||||||||||||||| Sbjct: 2511 tgggaggccaagctgccg 2494
>dbj|AP005864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0047P18 Length = 169128 Score = 83.8 bits (42), Expect = 6e-13 Identities = 114/138 (82%) Strand = Plus / Minus Query: 275 ctgggcgacctgccggagctctgcgccgcgcaggtgctgctccggctcgacgcgccggag 334 ||||| |||||||||||| ||||| ||| ||||||||| | |||| ||| |||||||| Sbjct: 117004 ctgggggacctgccggagagctgcgtggcggaggtgctgcgcaggctggacccgccggag 116945 Query: 335 atctgccgcctcgcgcggctcaaccacgcgttccgcggcgccgcgggggcagacttcgtg 394 |||||||| | |||||||||| || | ||||||||||||||||| | ||| ||| Sbjct: 116944 atctgccggatggcgcggctcagccgcacgttccgcggcgccgcgtccggcgacggcgtc 116885 Query: 395 tgggaggccaagctgccg 412 |||||||||||||||||| Sbjct: 116884 tgggaggccaagctgccg 116867
>dbj|AK066620.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073O17, full insert sequence Length = 1575 Score = 63.9 bits (32), Expect = 6e-07 Identities = 83/100 (83%) Strand = Plus / Plus Query: 275 ctgggcgacctgccggagctctgcgccgcgcaggtgctgctccggctcgacgcgccggag 334 ||||| |||||||||||| ||||| ||| ||||||||| | |||| ||| |||||||| Sbjct: 515 ctgggggacctgccggagagctgcgtggcggaggtgctgcgcaggctggacccgccggag 574 Query: 335 atctgccgcctcgcgcggctcaaccacgcgttccgcggcg 374 |||||||| | |||||||||| || | |||||| ||||| Sbjct: 575 atctgccggatggcgcggctcagccgcacgttccacggcg 614
>emb|AL607001.4|OSJN00128 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088I22, complete sequence Length = 164572 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Minus Query: 275 ctgggcgacctgccggagctctgcgccgcgcaggtgctgctccggctcgacgcgccggag 334 ||||||||| |||||||| ||||| |||| |||||||||| |||||| |||||||| Sbjct: 66076 ctgggcgacatgccggagagctgcgtcgcggcggtgctgctctacctcgacccgccggag 66017 Query: 335 atctgccgcctcgcgcggctcaaccacgcgttccgcggcgccgc 378 |||||| |||| || ||||||| |||||||| |||||||| Sbjct: 66016 atctgcaaggtcgcccgcctcaaccgggcgttccggggcgccgc 65973
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 275 ctgggcgacctgccggagctctgcgccgcgcaggtgctgctccggctcgacgcgccggag 334 ||||||||| |||||||| ||||| |||| |||||||||| |||||| |||||||| Sbjct: 28724882 ctgggcgacatgccggagagctgcgtcgcggcggtgctgctctacctcgacccgccggag 28724941 Query: 335 atctgccgcctcgcgcggctcaaccacgcgttccgcggcgccgc 378 |||||| |||| || ||||||| |||||||| |||||||| Sbjct: 28724942 atctgcaaggtcgcccgcctcaaccgggcgttccggggcgccgc 28724985
>dbj|AK119923.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-G10, full insert sequence Length = 1456 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 275 ctgggcgacctgccggagctctgcgccgcgcaggtgctgctccggctcgacgcgccggag 334 ||||||||| |||||||| ||||| |||| |||||||||| |||||| |||||||| Sbjct: 498 ctgggcgacatgccggagagctgcgtcgcggcggtgctgctctacctcgacccgccggag 557 Query: 335 atctgccgcctcgcgcggctcaaccacgcgttccgcggcgccgc 378 |||||| |||| || ||||||| |||||||| |||||||| Sbjct: 558 atctgcaaggtcgcccgcctcaaccgggcgttccggggcgccgc 601 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 536 ggcaccaaggaattttggctagagaaga 563 |||||||||||||||||| | ||||||| Sbjct: 792 ggcaccaaggaattttggatggagaaga 819
>dbj|AK099216.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013081J09, full insert sequence Length = 1684 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 275 ctgggcgacctgccggagctctgcgccgcgcaggtgctgctccggctcgacgcgccggag 334 ||||||||| |||||||| ||||| |||| |||||||||| |||||| |||||||| Sbjct: 468 ctgggcgacatgccggagagctgcgtcgcggcggtgctgctctacctcgacccgccggag 527 Query: 335 atctgccgcctcgcgcggctcaaccacgcgttccgcggcgccgc 378 |||||| |||| || ||||||| |||||||| |||||||| Sbjct: 528 atctgcaaggtcgcccgcctcaaccgggcgttccggggcgccgc 571 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 536 ggcaccaaggaattttggctagagaaga 563 |||||||||||||||||| | ||||||| Sbjct: 762 ggcaccaaggaattttggatggagaaga 789
>dbj|AK064611.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-B11, full insert sequence Length = 1715 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 275 ctgggcgacctgccggagctctgcgccgcgcaggtgctgctccggctcgacgcgccggag 334 ||||||||| |||||||| ||||| |||| |||||||||| |||||| |||||||| Sbjct: 498 ctgggcgacatgccggagagctgcgtcgcggcggtgctgctctacctcgacccgccggag 557 Query: 335 atctgccgcctcgcgcggctcaaccacgcgttccgcggcgccgc 378 |||||| |||| || ||||||| |||||||| |||||||| Sbjct: 558 atctgcaaggtcgcccgcctcaaccgggcgttccggggcgccgc 601 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 536 ggcaccaaggaattttggctagagaaga 563 |||||||||||||||||| | ||||||| Sbjct: 792 ggcaccaaggaattttggatggagaaga 819
>emb|CR723733.2|CNS0GLDN Tetraodon nigroviridis full-length cDNA Length = 1361 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 488 accaaggagatctacgccaggct 510 ||||||||||||||||||||||| Sbjct: 56 accaaggagatctacgccaggct 78
>ref|XM_473560.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 840 Score = 44.1 bits (22), Expect = 0.52 Identities = 76/94 (80%) Strand = Plus / Plus Query: 285 tgccggagctctgcgccgcgcaggtgctgctccggctcgacgcgccggagatctgccgcc 344 |||||||| ||||| |||| |||||||||| |||||| |||||||||||||| Sbjct: 2 tgccggagagctgcgtcgcggcggtgctgctctacctcgacccgccggagatctgcaagg 61 Query: 345 tcgcgcggctcaaccacgcgttccgcggcgccgc 378 |||| || ||||||| |||||||| |||||||| Sbjct: 62 tcgcccgcctcaaccgggcgttccggggcgccgc 95 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 536 ggcaccaaggaattttggctagagaaga 563 |||||||||||||||||| | ||||||| Sbjct: 286 ggcaccaaggaattttggatggagaaga 313
>gb|AC120884.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0017D19, complete sequence Length = 142015 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 230 ggcgttggcggcccggcggcgg 251 |||||||||||||||||||||| Sbjct: 34781 ggcgttggcggcccggcggcgg 34802
>emb|BX088654.11| Zebrafish DNA sequence from clone CH211-195H6 in linkage group 15, complete sequence Length = 205794 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 138 tacatactactactactacaaa 159 |||||||||||||||||||||| Sbjct: 97165 tacatactactactactacaaa 97186
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 230 ggcgttggcggcccggcggcgg 251 |||||||||||||||||||||| Sbjct: 22603995 ggcgttggcggcccggcggcgg 22604016 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 tgctgctccggctcgacgcg 328 |||||||||||||||||||| Sbjct: 17472955 tgctgctccggctcgacgcg 17472936
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 230 ggcgttggcggcccggcggcgg 251 |||||||||||||||||||||| Sbjct: 22913906 ggcgttggcggcccggcggcgg 22913927 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 tgctgctccggctcgacgcg 328 |||||||||||||||||||| Sbjct: 17566665 tgctgctccggctcgacgcg 17566646
>ref|XM_465098.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1605 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 cggcggcggaggctgcgccgg 263 ||||||||||||||||||||| Sbjct: 159 cggcggcggaggctgcgccgg 179
>gb|AY237128.1| Zea mays myb-related protein c1-I-2K1 mRNA, complete cds Length = 826 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 457 ggagggcaggcgccggcgccg 477 ||||||||||||||||||||| Sbjct: 341 ggagggcaggcgccggcgccg 361
>gb|DQ249342.1| Streptomyces hygroscopicus subsp. duamyceticus strain JCM4427 unknown polyketide biosynthetic gene cluster, partial sequence; and AHBA biosynthesis gene cluster, complete sequence Length = 55488 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 263 ggtgctgcgggcctgggcgac 283 ||||||||||||||||||||| Sbjct: 52274 ggtgctgcgggcctgggcgac 52254
>gb|AC132608.2| Mus musculus BAC clone RP23-451E12 from chromosome 18, complete sequence Length = 201478 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 445 gggcgggggcgaggagggcaggcgc 469 |||||||||||||| |||||||||| Sbjct: 42958 gggcgggggcgaggggggcaggcgc 42982
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 461 ggcaggcgccggcgccgccgggccg 485 |||||||||||| |||||||||||| Sbjct: 1693344 ggcaggcgccggtgccgccgggccg 1693320
>gb|AF320614.3| Zea mays anthocyanin regulatory C1 (c1) gene, C1-1170 allele, complete cds Length = 6669 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 457 ggagggcaggcgccggcgccg 477 ||||||||||||||||||||| Sbjct: 2912 ggagggcaggcgccggcgccg 2932
>gb|AF320613.3| Zea mays anthocyanin regulatory C1 (c1) gene, C1-1162 allele, complete cds Length = 6666 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 457 ggagggcaggcgccggcgccg 477 ||||||||||||||||||||| Sbjct: 2914 ggagggcaggcgccggcgccg 2934
>emb|X52201.1|ZMC1I Z.mays C1-I gene Length = 2204 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 457 ggagggcaggcgccggcgccg 477 ||||||||||||||||||||| Sbjct: 1203 ggagggcaggcgccggcgccg 1223
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29 Length = 276800 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 262 gggtgctgcgggcctgggcgacctgccgg 290 ||||||||||||||| || |||||||||| Sbjct: 100926 gggtgctgcgggcctcggggacctgccgg 100898
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 465 ggcgccggcgccgccgggccg 485 ||||||||||||||||||||| Sbjct: 2088790 ggcgccggcgccgccgggccg 2088770
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Plus Query: 327 cgccggagatctgccgcctcgcgcggctcaaccacgcgttccgcggcgc 375 ||||||||||||||| |||| || ||||||| ||| ||||||||||| Sbjct: 27567592 cgccggagatctgccaagtcgcccgcctcaaccgcgccttccgcggcgc 27567640 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 cggcggcggaggctgcgccgg 263 ||||||||||||||||||||| Sbjct: 11477666 cggcggcggaggctgcgccgg 11477686
>dbj|AP006060.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0135D07 Length = 170587 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Plus Query: 327 cgccggagatctgccgcctcgcgcggctcaaccacgcgttccgcggcgc 375 ||||||||||||||| |||| || ||||||| ||| ||||||||||| Sbjct: 47261 cgccggagatctgccaagtcgcccgcctcaaccgcgccttccgcggcgc 47309
>dbj|AP005534.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0030M21 Length = 155970 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 cggcggcggaggctgcgccgg 263 ||||||||||||||||||||| Sbjct: 60158 cggcggcggaggctgcgccgg 60178
>emb|X06333.1|ZMC1 Z.mays DNA for c1 locus Length = 4060 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 457 ggagggcaggcgccggcgccg 477 ||||||||||||||||||||| Sbjct: 1653 ggagggcaggcgccggcgccg 1673
>dbj|AK105486.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-B08, full insert sequence Length = 1605 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 243 cggcggcggaggctgcgccgg 263 ||||||||||||||||||||| Sbjct: 159 cggcggcggaggctgcgccgg 179
>dbj|AK100726.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023117D20, full insert sequence Length = 1834 Score = 42.1 bits (21), Expect = 2.0 Identities = 42/49 (85%) Strand = Plus / Plus Query: 327 cgccggagatctgccgcctcgcgcggctcaaccacgcgttccgcggcgc 375 ||||||||||||||| |||| || ||||||| ||| ||||||||||| Sbjct: 686 cgccggagatctgccaagtcgcccgcctcaaccgcgccttccgcggcgc 734
>gb|AY530950.1| Zea mays putative zinc finger protein (Z438D03.1), unknown (Z438D03.5), epsilon-COP (Z438D03.6), putative kinase (Z438D03.7), unknown (Z438D03.25), and C1-B73 (Z438D03.27) genes, complete cds Length = 185988 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 457 ggagggcaggcgccggcgccg 477 ||||||||||||||||||||| Sbjct: 157916 ggagggcaggcgccggcgccg 157896
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 465 ggcgccggcgccgccgggccg 485 ||||||||||||||||||||| Sbjct: 2108692 ggcgccggcgccgccgggccg 2108672
>gb|AF506521.1| Streptomyces hygroscopicus ShnO gene, complete cds Length = 1101 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 263 ggtgctgcgggcctgggcgac 283 ||||||||||||||||||||| Sbjct: 1002 ggtgctgcgggcctgggcgac 982
>gb|M37153.1|MZEMYBAA Z.mays c1 locus myb homologue cDNA, exons 1-3 Length = 4059 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 457 ggagggcaggcgccggcgccg 477 ||||||||||||||||||||| Sbjct: 1653 ggagggcaggcgccggcgccg 1673
>gb|AC150426.3| Branchiostoma floridae clone CH302-83B17, complete sequence Length = 192173 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 ctacatactactactactac 156 |||||||||||||||||||| Sbjct: 101332 ctacatactactactactac 101313
>gb|AC136377.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0028G07, complete sequence Length = 157463 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 tgctgctccggctcgacgcg 328 |||||||||||||||||||| Sbjct: 66969 tgctgctccggctcgacgcg 66950
>ref|XM_361803.1| Magnaporthe grisea 70-15 predicted protein (MG04277.4) partial mRNA Length = 2259 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 532 cgacggcaccaaggaatttt 551 |||||||||||||||||||| Sbjct: 591 cgacggcaccaaggaatttt 572
>gb|DQ508694.1| Branchiostoma belcheri creatine kinase mRNA, complete cds Length = 1140 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 488 accaaggagatctacgccaggctc 511 ||||||||||||||||||| |||| Sbjct: 88 accaaggagatctacgccaagctc 111
>gb|BC051018.1| Mus musculus nescient helix loop helix 1, mRNA (cDNA clone MGC:54645 IMAGE:6312358), complete cds Length = 2493 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 455 gaggagggcaggcgccggcgccgc 478 |||||| ||||||||||||||||| Sbjct: 646 gaggagcgcaggcgccggcgccgc 669
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 gatctgccgcctcgcgcggc 353 |||||||||||||||||||| Sbjct: 287402 gatctgccgcctcgcgcggc 287383
>gb|AF484556.1| Streptomyces atroolivaceus leinamycin biosynthetic gene cluster, complete sequence Length = 135638 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 352 gctcaaccacgcgttccgcg 371 |||||||||||||||||||| Sbjct: 64622 gctcaaccacgcgttccgcg 64641
>emb|CR759874.20| Zebrafish DNA sequence from clone CH211-214H24 in linkage group 20, complete sequence Length = 223471 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 actactactactacaaaggg 162 |||||||||||||||||||| Sbjct: 12860 actactactactacaaaggg 12879
>emb|CR848816.11| Zebrafish DNA sequence from clone DKEY-99F10 in linkage group 11, complete sequence Length = 158354 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 ctacatactactactactac 156 |||||||||||||||||||| Sbjct: 1270 ctacatactactactactac 1251
>emb|BX571802.15| Zebrafish DNA sequence from clone CH211-197A16 in linkage group 10, complete sequence Length = 196999 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 acatactactactactacaa 158 |||||||||||||||||||| Sbjct: 143672 acatactactactactacaa 143653
>gb|BC054760.1| Mus musculus nescient helix loop helix 1, mRNA (cDNA clone MGC:64734 IMAGE:6413421), complete cds Length = 2483 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 455 gaggagggcaggcgccggcgccgc 478 |||||| ||||||||||||||||| Sbjct: 647 gaggagcgcaggcgccggcgccgc 670
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 103 cggtgatcggcttcttcgcg 122 |||||||||||||||||||| Sbjct: 2180810 cggtgatcggcttcttcgcg 2180829
>gb|AC083928.11| Homo sapiens chromosome 8, clone RP11-77C4, complete sequence Length = 144023 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 gcgccgggtgctgcgggcctgggc 280 |||||||||||||||||| ||||| Sbjct: 83612 gcgccgggtgctgcgggcttgggc 83589
>gb|AC158930.3| Mus musculus chromosome 1, clone RP23-244J9, complete sequence Length = 214509 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 455 gaggagggcaggcgccggcgccgc 478 |||||| ||||||||||||||||| Sbjct: 134942 gaggagcgcaggcgccggcgccgc 134919
>emb|AJ969065.1| Zea mays mRNA for glycosyltransferase (pglcat8 gene) Length = 1522 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 gcggcgccgcgggggcagac 388 |||||||||||||||||||| Sbjct: 114 gcggcgccgcgggggcagac 133
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 cgggcctgggcgacctgccg 289 |||||||||||||||||||| Sbjct: 729440 cgggcctgggcgacctgccg 729459
>emb|BX640433.1| Bordetella parapertussis strain 12822, complete genome; segment 11/14 Length = 349305 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 461 ggcaggcgccggcgccgccgggccggca 488 ||||||||||||||| ||||| |||||| Sbjct: 41443 ggcaggcgccggcgcggccggcccggca 41470
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 gatctgccgcctcgcgcggc 353 |||||||||||||||||||| Sbjct: 1613188 gatctgccgcctcgcgcggc 1613169
>emb|AJ429233.1|SRE429233 Stevia rebaudiana mRNA for 1-deoxy-D-xylulose 5-phosphate reductoisomerase (dxr gene) Length = 1422 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 cggcggcggaggctgcgccg 262 |||||||||||||||||||| Sbjct: 168 cggcggcggaggctgcgccg 149
>emb|Z26595.1|CHZMCPT Z.mays zmcpt mRNA triose phosphate/phosphate translocator Length = 1588 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 ggcggcccggcggcggaggc 255 |||||||||||||||||||| Sbjct: 107 ggcggcccggcggcggaggc 88
>dbj|AK138366.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230080D24 product:glutamate receptor ionotropic, NMDA3A, full insert sequence Length = 3759 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 gcgggcctgggcgacctgcc 288 |||||||||||||||||||| Sbjct: 1155 gcgggcctgggcgacctgcc 1174
>dbj|AK162603.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630050L15 product:glutamate receptor ionotropic, NMDA3A, full insert sequence Length = 4814 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 gcgggcctgggcgacctgcc 288 |||||||||||||||||||| Sbjct: 1076 gcgggcctgggcgacctgcc 1095
>gb|AF251440.1|AF251440 Branchiostoma floridae creatine kinase mRNA, partial cds Length = 1137 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 488 accaaggagatctacgccaggctc 511 ||||||||||||||||||| |||| Sbjct: 88 accaaggagatctacgccaagctc 111
>gb|AF336848.1|AF336848 Pseudomonas pseudoalcaligenes HBQ06 PHA synthase 1 (phaC1) gene, complete cds; PHA depolymerase (phaZ) gene, partial cds; and unknown gene Length = 2939 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 cccggcggcggaggctgcgccggg 264 |||||| ||||||||||||||||| Sbjct: 2075 cccggccgcggaggctgcgccggg 2098
>dbj|AK044171.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830097C19 product:similar to IONOTROPIC GLUTAMATE RECEPTOR NMDA subunit NR3A[Rattus norvegicus], full insert sequence Length = 3801 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 gcgggcctgggcgacctgcc 288 |||||||||||||||||||| Sbjct: 1131 gcgggcctgggcgacctgcc 1150
>emb|CR354133.1| Gallus gallus finished cDNA, clone ChEST385h9 Length = 1069 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 245 gcggcggaggctgcgccgggtgct 268 ||||||| |||||||||||||||| Sbjct: 376 gcggcgggggctgcgccgggtgct 353
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 atactactactactacaaag 160 |||||||||||||||||||| Sbjct: 18445999 atactactactactacaaag 18446018
>ref|NM_204353.1| Gallus gallus insulin-like growth factor binding protein 4 (IGFBP4), mRNA Length = 1809 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 245 gcggcggaggctgcgccgggtgct 268 ||||||| |||||||||||||||| Sbjct: 1149 gcggcgggggctgcgccgggtgct 1126
>dbj|AK173314.1| Mus musculus mRNA for mKIAA1973 protein Length = 5551 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 gcgggcctgggcgacctgcc 288 |||||||||||||||||||| Sbjct: 155 gcgggcctgggcgacctgcc 174
>gb|AY230206.1| Gallus gallus insulin-like growth factor-binding protein-4 mRNA, complete cds Length = 1809 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 245 gcggcggaggctgcgccgggtgct 268 ||||||| |||||||||||||||| Sbjct: 1149 gcggcgggggctgcgccgggtgct 1126
>dbj|AB192413.1| Gallus gallus IGFBP4 gene for insulin-like growth factor binding protein-4, complete cds Length = 5927 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 245 gcggcggaggctgcgccgggtgct 268 ||||||| |||||||||||||||| Sbjct: 5267 gcggcgggggctgcgccgggtgct 5244
>ref|XM_222898.2| PREDICTED: Rattus norvegicus nescient helix loop helix 1 (predicted) (Nhlh1_predicted), mRNA Length = 1015 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 455 gaggagggcaggcgccggcgccgc 478 |||||| ||||||||||||||||| Sbjct: 763 gaggagcgcaggcgccggcgccgc 786
>emb|BX664611.6| Mouse DNA sequence from clone RP24-201C13 on chromosome X, complete sequence Length = 59966 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 ccatctacatactactactactac 156 |||||||||||||||| ||||||| Sbjct: 49980 ccatctacatactactgctactac 49957
>emb|AL935290.10| Zebrafish DNA sequence from clone CH211-270H11, complete sequence Length = 129665 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 acatactactactactacaa 158 |||||||||||||||||||| Sbjct: 65408 acatactactactactacaa 65427
>dbj|AP005502.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0473F05 Length = 140575 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 atactactactactacaaag 160 |||||||||||||||||||| Sbjct: 132168 atactactactactacaaag 132187
>dbj|AP004634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0671F11 Length = 159409 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 atactactactactacaaag 160 |||||||||||||||||||| Sbjct: 28022 atactactactactacaaag 28041
>gb|AC074310.29| Mus musculus strain C57BL/6J chromosome 1 clone rp23-137i20, complete sequence Length = 222328 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 455 gaggagggcaggcgccggcgccgc 478 |||||| ||||||||||||||||| Sbjct: 173293 gaggagcgcaggcgccggcgccgc 173316
>ref|NM_010916.1| Mus musculus nescient helix loop helix 1 (Nhlh1), mRNA Length = 2458 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 455 gaggagggcaggcgccggcgccgc 478 |||||| ||||||||||||||||| Sbjct: 639 gaggagcgcaggcgccggcgccgc 662
>gb|J00016.1|BOVPOMC3 Bovine proopiomelanocortin (POMC) gene, exon 1, 5' UT mRNA Length = 354 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 185 aggaagcggggagccatgggggcg 208 ||||||||||||||| |||||||| Sbjct: 89 aggaagcggggagccgtgggggcg 66
>gb|M82874.1|MUSNSCL Mouse NSCL protein mRNA, complete cds Length = 2458 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 455 gaggagggcaggcgccggcgccgc 478 |||||| ||||||||||||||||| Sbjct: 639 gaggagcgcaggcgccggcgccgc 662
>gb|M97506.1|MUSHEN1A Mus musculus helix-loop-helix protein (Hen1) gene, complete cds Length = 600 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 455 gaggagggcaggcgccggcgccgc 478 |||||| ||||||||||||||||| Sbjct: 388 gaggagcgcaggcgccggcgccgc 411
>emb|AL807392.7| Mouse DNA sequence from clone RP23-104D24 on chromosome 4, complete sequence Length = 132773 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 gcgggcctgggcgacctgcc 288 |||||||||||||||||||| Sbjct: 92552 gcgggcctgggcgacctgcc 92533 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,381,277 Number of Sequences: 3902068 Number of extensions: 4381277 Number of successful extensions: 161077 Number of sequences better than 10.0: 88 Number of HSP's better than 10.0 without gapping: 91 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 158777 Number of HSP's gapped (non-prelim): 2293 length of query: 593 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 570 effective length of database: 17,143,297,704 effective search space: 9771679691280 effective search space used: 9771679691280 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
