Clone Information

BLAST Search Result

Clone Name	bart55h03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	KCNH2_CANFA (Q9TSZ3) Potassium voltage-gated channel subfamily H...	33	0.16
2	NAC29_ARATH (O49255) NAC domain-containing protein 29 (ANAC029) ...	32	0.47
3	PKN3_MYXXA (Q9XBQ0) Serine/threonine-protein kinase pkn3 (EC 2.7...	31	0.80
4	KLF13_HUMAN (Q9Y2Y9) Krueppel-like factor 13 (Transcription fact...	31	0.80
5	KCNH2_HUMAN (Q12809) Potassium voltage-gated channel subfamily H...	31	0.80
6	KCNH2_RABIT (Q8WNY2) Potassium voltage-gated channel subfamily H...	31	0.80
7	YEA1_YEAST (P40006) Protein YEL001C precursor	30	1.1
8	MUCAP_PIG (P12021) Apomucin (Mucin core protein) (Fragment)	30	1.1
9	YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in...	30	1.8
10	ENV_FOAMV (P14351) Env polyprotein (Coat polyprotein)	29	2.3
11	SYN_DROME (Q24546) Synapsin [Contains: Synapsin-1 (Syn1) (Syn1-S...	29	2.3
12	IE18_PRVIF (P11675) Immediate-early protein IE180	29	2.3
13	NAC67_ORYSA (Q7EZT1) NAC domain-containing protein 67 (ONAC067)	29	3.1
14	OPRK_CAVPO (P41144) Kappa-type opioid receptor (KOR-1)	29	3.1
15	KCNH2_MOUSE (O35219) Potassium voltage-gated channel subfamily H...	28	4.0
16	FABH2_STRCO (Q9Z4Y5) 3-oxoacyl-[acyl-carrier-protein] synthase 3...	28	4.0
17	RL24_AERPE (Q9YF83) 50S ribosomal protein L24P	28	4.0
18	KCNH2_RAT (O08962) Potassium voltage-gated channel subfamily H m...	28	4.0
19	MEF2A_XENLA (Q03414) Myocyte-specific enhancer factor 2A homolog...	28	4.0
20	AROB_SYNEL (Q8DKS3) 3-dehydroquinate synthase (EC 4.2.3.4)	28	4.0
21	CDX1_MOUSE (P18111) Homeobox protein CDX-1 (Caudal-type homeobox...	28	4.0
22	KRHB4_HUMAN (Q9NSB2) Keratin, type II cuticular Hb4 (Hair kerati...	28	5.2
23	VP40_HCMVA (P16753) Capsid protein P40 [Contains: Assemblin (Pro...	28	5.2
24	TRUA_XANAC (Q8PJ25) tRNA pseudouridine synthase A (EC 5.4.99.12)...	28	5.2
25	LHX9_MOUSE (Q9WUH2) LIM/homeobox protein Lhx9	28	5.2
26	LHX9_HUMAN (Q9NQ69) LIM/homeobox protein Lhx9	28	5.2
27	MCPH1_COLGU (P61590) Microcephalin	28	5.2
28	Y1709_RALSO (Q8XYP9) UPF0209 protein RSc1709	28	5.2
29	TRPS1_MOUSE (Q925H1) Zinc finger transcription factor Trps1	28	5.2
30	PDZK3_RAT (Q9QZR8) PDZ domain-containing protein 3 (PDZ domain-c...	28	5.2
31	NAC74_ORYSA (Q7GCL7) NAC domain-containing protein 74 (ONAC074)	28	5.2
32	STE7_SCHPO (Q10136) Protein ste7	28	5.2
33	IE18_PRVKA (P33479) Immediate-early protein IE180	28	6.8
34	SCNAA_RABIT (O97741) Amiloride-sensitive sodium channel alpha-su...	28	6.8
35	ARLY_DESVH (Q72D36) Argininosuccinate lyase (EC 4.3.2.1) (Argino...	28	6.8
36	MODA_MYCTU (P0A5Y0) Molybdate-binding protein precursor	28	6.8
37	MODA_MYCBO (P0A5Y1) Molybdate-binding protein precursor	28	6.8
38	MCHR1_PANTR (Q5IJ49) Melanin-concentrating hormone receptor 1 (M...	28	6.8
39	MCHR1_HUMAN (Q99705) Melanin-concentrating hormone receptor 1 (M...	28	6.8
40	FIBP_ADE12 (P36711) Fiber protein (pIV)	28	6.8
41	ENC_DROME (Q8MSX1) Protein encore	27	8.9
42	DPH2_ASHGO (Q757B6) Diphthamide biosynthesis protein 2	27	8.9
43	CIC_MOUSE (Q924A2) Protein capicua homolog	27	8.9
44	ADPR_RHOER (Q01357) ATP-dependent protease ATP-binding subunit-l...	27	8.9
45	FAS_BOVIN (Q71SP7) Fatty acid synthase (EC 2.3.1.85) [Includes: ...	27	8.9
46	BPL1_MOUSE (Q920N2) Biotin--protein ligase (EC 6.3.4.-) (Biotin ...	27	8.9
47	ARI1B_HUMAN (Q8NFD5) AT-rich interactive domain-containing prote...	27	8.9
48	NAC48_ORYSA (Q7F2L3) NAC domain-containing protein 48 (ONAC048)	27	8.9
49	ATKB_HALSA (P57699) Potassium-transporting ATPase B chain (EC 3....	27	8.9
50	TYCC_BREPA (O30409) Tyrocidine synthetase 3 (Tyrocidine syntheta...	27	8.9
51	SDC3_CHICK (P26261) Syndecan-3 precursor	27	8.9
52	VGLG_HHV2H (P13290) Glycoprotein G	27	8.9
53	NRG2_MOUSE (P56974) Pro-neuregulin-2, membrane-bound isoform pre...	27	8.9
54	SMY1_YEAST (P32364) Kinesin-related protein SMY1 (Suppressor pro...	27	8.9

>KCNH2_CANFA (Q9TSZ3) Potassium voltage-gated channel subfamily H member 2|
            (Voltage-gated potassium channel subunit Kv11.1)
            (Ether-a-go-go-related gene potassium channel 1) (ERG1)
            (c-erg) (DERG) (Ether-a-go-go-related protein 1)
            (Eag-related protein 1)
          Length = 1158

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
 Frame = -1

Query: 310  PRRTACAPSGTGRT------MPSPGWSVPDSTYSTGPVAFQ*GMACAPVTLVPF 167
            P R    PSG GR        PS G S P+S+   GP     G + +P+ LVPF
Sbjct: 909  PGRAGAGPSGRGRPGGPWGESPSSGPSSPESSEDEGP-----GRSSSPLRLVPF 957

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>NAC29_ARATH (O49255) NAC domain-containing protein 29 (ANAC029) (NAC2)|
           (NAC-LIKE, ACTIVATED BY AP3/PI protein) (NAP)
          Length = 268

 Score = 31.6 bits (70), Expect = 0.47
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = +3

Query: 138 FEYPPNRSQMNGTRVTGAHAIPYWKATGPVEYVESGTDQPG 260
           F  P  R   NG R   A    YWKATG  + + SG+   G
Sbjct: 67  FFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSNVG 107

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>PKN3_MYXXA (Q9XBQ0) Serine/threonine-protein kinase pkn3 (EC 2.7.11.1)|
          Length = 547

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -1

Query: 355 APRVRLSCCRTEAPLPRRTACAPSGTGRTMPSPGW 251
           APR   +     APLPR++A +P    R    PGW
Sbjct: 298 APRRSANSSAVLAPLPRKSAASPQSDVRDATLPGW 332

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>KLF13_HUMAN (Q9Y2Y9) Krueppel-like factor 13 (Transcription factor BTEB3)|
           (Basic transcription element-binding protein 3)
           (BTE-binding protein 3) (RANTES factor of late activated
           T-lymphocytes 1) (RFLAT-1) (Transcription factor NSLP1)
           (Novel Sp1-like zin
          Length = 288

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = -1

Query: 355 APRVRLSCCRTEAPLPRRTACAPSGTGRTMPSPGWSVPD 239
           A R   + CR   P P  T+    G     PSP WS P+
Sbjct: 88  AARKARTPCRLPPPAPEPTSPGAEGAAAAPPSPAWSEPE 126

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>KCNH2_HUMAN (Q12809) Potassium voltage-gated channel subfamily H member 2|
            (Voltage-gated potassium channel subunit Kv11.1)
            (Ether-a-go-go related gene potassium channel 1) (H-ERG)
            (Erg1) (Ether-a-go-go related protein 1) (Eag-related
            protein 1) (eag homo
          Length = 1159

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
 Frame = -1

Query: 310  PRRTACAPSGTGRT------MPSPGWSVPDSTYSTGPVAFQ*GMACAPVTLVPF 167
            P R    PS  GR        PS G S P+S+   GP     G + +P+ LVPF
Sbjct: 910  PGRAGAGPSSRGRPGGPWGESPSSGPSSPESSEDEGP-----GRSSSPLRLVPF 958

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>KCNH2_RABIT (Q8WNY2) Potassium voltage-gated channel subfamily H member 2|
            (Voltage-gated potassium channel subunit Kv11.1)
            (Ether-a-go-go-related gene potassium channel 1) (ERG1)
            (RERG) (ra-erg) (Ether-a-go-go-related protein 1)
            (Eag-related protein 1)
          Length = 1161

 Score = 30.8 bits (68), Expect = 0.80
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
 Frame = -1

Query: 310  PRRTACAPSGTGRT------MPSPGWSVPDSTYSTGPVAFQ*GMACAPVTLVPF 167
            P R    PS  GR        PS G S P+S+   GP     G + +P+ LVPF
Sbjct: 912  PGRAGAGPSSRGRPGGPWGESPSSGPSSPESSEDEGP-----GRSSSPLRLVPF 960

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>YEA1_YEAST (P40006) Protein YEL001C precursor|
          Length = 225

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
 Frame = +3

Query: 165 MNGTRVTGAHAIPYWKATG----PVEYVESGTDQPGDGMVLPVPEGAH 296
           +NGT VT  H  P    TG    P E   +GT + G  + L +PEG +
Sbjct: 92  VNGTIVTYPHGYPVADITGASIGPYEMEVNGTSKFGQDVTLNLPEGQY 139

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>MUCAP_PIG (P12021) Apomucin (Mucin core protein) (Fragment)|
          Length = 1150

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 7/99 (7%)
 Frame = -1

Query: 286 SGTGRTMPSPGWSVPDSTYSTGPVAFQ*GMACAPVTLVPFICDLLGGYSKLPFSSGP--- 116
           SGT  ++PS G   P S  +TG  + Q        T V F   LL G S    ++ P   
Sbjct: 662 SGTSNSVPSGGSGTPGSGINTGGSSTQVTGIQTGTTAVGFGSTLLPGSSNTGATTSPSER 721

Query: 115 ----STSGTARAAVKASNSSAATQRAPLTTIDRSISASG 11
               S +G  R     + +S ++     T++ R  +  G
Sbjct: 722 TSPGSKTGITRVVSGTTVASGSSNTGATTSLGRGETTQG 760

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>YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in chromosome I|
          Length = 536

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
 Frame = -1

Query: 148 GYSKLPFSSGPSTSGTARAAVKASNSSAATQ---RAPLTTIDRSISAS 14
           G S  PF SGP+      AA  A +S + +      PL TI  S S S
Sbjct: 423 GLSASPFESGPAVGAAGAAAEAAEHSGSGSDSYPEGPLATIPESDSES 470

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>ENV_FOAMV (P14351) Env polyprotein (Coat polyprotein)|
          Length = 985

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -1

Query: 301 TACAPSGTGRTMPSPGWSVPDSTYSTGPVAFQ 206
           T C    T R +  P W  P+STY  G +A+Q
Sbjct: 444 TKCRDGETKRCLYYPLWDSPESTYDFGYLAYQ 475

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>SYN_DROME (Q24546) Synapsin [Contains: Synapsin-1 (Syn1) (Syn1-S); Synapsin-2|
           (Syn2)]
          Length = 1025

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 31/110 (28%), Positives = 40/110 (36%), Gaps = 2/110 (1%)
 Frame = -1

Query: 328 RTEAPLPRRTACAPSGTGRTMPSPGWSVPDSTYSTGPVAFQ*GMACA--PVTLVPFICDL 155
           R E+P     A  P       P+P    P     T P     G   +   ++ VP     
Sbjct: 461 RAESPTDEGVAPTPPLPAGPRPAPMGGPPPIPERTSPAVGSIGRLSSRSSISEVP----- 515

Query: 154 LGGYSKLPFSSGPSTSGTARAAVKASNSSAATQRAPLTTIDRSISASGDR 5
                + P SSGPST G  R   + S SS         TI  S+S +G R
Sbjct: 516 -----EEPSSSGPSTVGGVRRDSQTSQSS---------TISSSVSRAGQR 551

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>IE18_PRVIF (P11675) Immediate-early protein IE180|
          Length = 1461

 Score = 29.3 bits (64), Expect = 2.3
 Identities = 32/107 (29%), Positives = 42/107 (39%), Gaps = 2/107 (1%)
 Frame = -1

Query: 325 TEAPLPRRTACAPSGTGRTMPSPGWSVPDSTYSTGPVAFQ*GMACAPVTLVPFICDLLG- 149
           T A L    A AP G GR+ PS       S+ S+G      G + AP    P   D +G 
Sbjct: 150 TPAALAAAEAGAPGGPGRSSPSAASPASSSSGSSGSSGSP-GPSAAPRRWSPARGDPVGE 208

Query: 148 -GYSKLPFSSGPSTSGTARAAVKASNSSAATQRAPLTTIDRSISASG 11
            G +  P +  P     A AA  A    A    +P +     +SA G
Sbjct: 209 PGPAARPRTPAPPAQPAAVAAAPARRGPA----SPASPAAGPVSAPG 251

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>NAC67_ORYSA (Q7EZT1) NAC domain-containing protein 67 (ONAC067)|
          Length = 276

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +3

Query: 138 FEYPPNRSQMNGTRVTGAHAIPYWKATG 221
           F  P +R   NG+R   A A  YWKATG
Sbjct: 75  FFTPRDRKYPNGSRPNRAAASGYWKATG 102

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>OPRK_CAVPO (P41144) Kappa-type opioid receptor (KOR-1)|
          Length = 380

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = -1

Query: 349 RVRLSCCRTEAPLPRRTACA-PSGTGRTMPSPGWSVPDSTYSTGP 218
           R R    +  + LP R AC  P+G+      PGW+ PD   S GP
Sbjct: 3   RRRQGPAQPASELPARNACLLPNGSAWL---PGWAEPDGNGSAGP 44

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>KCNH2_MOUSE (O35219) Potassium voltage-gated channel subfamily H member 2|
            (Voltage-gated potassium channel subunit Kv11.1)
            (Ether-a-go-go related gene potassium channel 1) (ERG1)
            (MERG) (Merg1) (Ether-a-go-go related protein 1)
            (Eag-related protein 1)
          Length = 1162

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -1

Query: 289  PSGTGRTMPSPGWSVPDSTYSTGPVAFQ*GMACAPVTLVPF 167
            P G     PS G S P+S+   GP     G + +P+ LVPF
Sbjct: 927  PGGPWGESPSSGPSSPESSEDEGP-----GRSSSPLRLVPF 962

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>FABH2_STRCO (Q9Z4Y5) 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 2 (EC|
           2.3.1.41) (3-oxoacyl-[acyl-carrier-protein] synthase III
           protein 2) (Beta-ketoacyl-ACP synthase III 2) (KAS III
           2)
          Length = 330

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = +3

Query: 219 GPVEYVESGTDQPGDGMVLPVPEGAHAVRLGSGASVRQQLSLTRGA 356
           G V + E G+D  GD ++   P+GA+    GS    R   ++   A
Sbjct: 181 GAVLHTELGSDGTGDELITIPPDGAYLTMRGSDVYTRAVTTMAESA 226

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>RL24_AERPE (Q9YF83) 50S ribosomal protein L24P|
          Length = 132

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 18/62 (29%), Positives = 30/62 (48%)
 Frame = -3

Query: 293 RALRHRQDHAVARLVRPGLDVLHGAGGLPVGDGVRARHPRAVHLRPVGRVLEVAVQQRAI 114
           RA  H +   V+  + P L   +G   LPV  G + R  R       G+V++V +++  I
Sbjct: 19  RAPLHARQKLVSATLSPELREKYGVRSLPVRKGDKVRVMRGDFKGHEGKVVKVDLRRLRI 78

Query: 113 YV 108
           Y+
Sbjct: 79  YI 80

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>KCNH2_RAT (O08962) Potassium voltage-gated channel subfamily H member 2|
            (Voltage-gated potassium channel subunit Kv11.1)
            (Ether-a-go-go-related gene potassium channel 1) (ERG1)
            (r-ERG) (RERG) (Ether-a-go-go-related protein 1)
            (Eag-related protein 1)
          Length = 1163

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -1

Query: 289  PSGTGRTMPSPGWSVPDSTYSTGPVAFQ*GMACAPVTLVPF 167
            P G     PS G S P+S+   GP     G + +P+ LVPF
Sbjct: 927  PGGPWGESPSSGPSSPESSEDEGP-----GRSSSPLRLVPF 962

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>MEF2A_XENLA (Q03414) Myocyte-specific enhancer factor 2A homolog (Serum|
           response factor-like protein 2) (SL-2)
          Length = 516

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = -1

Query: 136 LPFSSGPSTSGTARAAVKASNSSAATQRAPLTTIDRSISASG 11
           LP+SS  +T  TA  A  AS + A     P TT+ R++   G
Sbjct: 193 LPYSSPGNTMVTASLAASASLTDARMLSPPPTTLHRNVFPQG 234

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>AROB_SYNEL (Q8DKS3) 3-dehydroquinate synthase (EC 4.2.3.4)|
          Length = 368

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +3

Query: 270 VLPVPEGAHAVRLGSGASVRQQL 338
           ++PVP G H+ R+  GA+ R+QL
Sbjct: 4   LIPVPLGEHSYRIAIGANTRRQL 26

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>CDX1_MOUSE (P18111) Homeobox protein CDX-1 (Caudal-type homeobox protein 1)|
          Length = 268

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 2/105 (1%)
 Frame = -1

Query: 319 APLPRRTACAPSGTGRTMPSPGWSVPDSTYSTGPVAFQ*GMACAPVTLVPFICDLLGGYS 140
           AP P  T  AP       P   W+   + Y  GP A     + AP+   P        +S
Sbjct: 54  APAPPPTWAAPFPA----PKDDWA---AAYGPGPTAS--AASPAPLAFGP-----PPDFS 99

Query: 139 KLPFSSGPSTSGTARA--AVKASNSSAATQRAPLTTIDRSISASG 11
            +P   GP     A++  A  A +S  A +R P   + RS++A+G
Sbjct: 100 PVPAPPGPGPGILAQSLGAPGAPSSPGAPRRTPYEWMRRSVAAAG 144

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>KRHB4_HUMAN (Q9NSB2) Keratin, type II cuticular Hb4 (Hair keratin, type II Hb4)|
          Length = 600

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 27/96 (28%), Positives = 38/96 (39%), Gaps = 1/96 (1%)
 Frame = -1

Query: 286 SGTGRTMPSPGWSVPDSTYSTGPVAFQ*GMA-CAPVTLVPFICDLLGGYSKLPFSSGPST 110
           S  G  +  P   V  ST S G V F    + CA   ++      LGG    P +    +
Sbjct: 489 SSRGGLVCGPEPLVAGSTLSRGGVTFSGSSSVCATSGVLASCGPSLGGARVAPATGDLLS 548

Query: 109 SGTARAAVKASNSSAATQRAPLTTIDRSISASGDRS 2
           +GT   ++  S +   +   PL T     S SG RS
Sbjct: 549 TGTRSGSMLISEACVPSVPCPLPTQGGFSSCSGGRS 584

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>VP40_HCMVA (P16753) Capsid protein P40 [Contains: Assemblin (Protease) (EC|
           3.4.21.97); Capsid assembly protein; Gene UL80 protein;
           Gene UL80.5 protein; C-terminal peptide]
          Length = 708

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 6/96 (6%)
 Frame = -1

Query: 301 TACAPSGTGRTMPSPGWSVPDSTYSTGPVAFQ*GMACAPVTLVPFICDLLGGYSKLPFSS 122
           T C P+G    + S G   P +  S G    +   A     +V   C L         ++
Sbjct: 606 TVCTPTGE---LTSGGGETPTALLSGGAKVAERAQA----GVVNASCRLATASGSEAATA 658

Query: 121 GPSTSGTARA------AVKASNSSAATQRAPLTTID 32
           GPST+G++        A  A+ ++AA+Q  P   +D
Sbjct: 659 GPSTAGSSSCPASVVLAAAAAQAAAASQSPPKDMVD 694

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>TRUA_XANAC (Q8PJ25) tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA-uridine|
           isomerase I) (tRNA pseudouridylate synthase I)
          Length = 257

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 27/86 (31%)
 Frame = -3

Query: 293 RALRHRQDHAVARLVRPGL--------------DVLHGAGGLPVGDGVRA---------- 186
           RA R+R    + R +RP L              D +HGA    +G+   +          
Sbjct: 107 RARRYRY-RLLNRQIRPALYRQTLSWERRPLDADAMHGAAQALLGENDFSAFRSVQCQAL 165

Query: 185 ---RHPRAVHLRPVGRVLEVAVQQRA 117
              RH +A+H++ +G V+EV VQ  A
Sbjct: 166 HARRHLQAIHVQRIGEVVEVQVQANA 191

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>LHX9_MOUSE (Q9WUH2) LIM/homeobox protein Lhx9|
          Length = 388

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +3

Query: 123 LLNGNFEYPPNRSQMNGTRVTGAHAIPYWKATGPVE 230
           LL G  EYPP  S       +G  A+PY+  TG V+
Sbjct: 181 LLQG--EYPPQLSYTELAAKSGGLALPYFNGTGTVQ 214

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>LHX9_HUMAN (Q9NQ69) LIM/homeobox protein Lhx9|
          Length = 388

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +3

Query: 123 LLNGNFEYPPNRSQMNGTRVTGAHAIPYWKATGPVE 230
           LL G  EYPP  S       +G  A+PY+  TG V+
Sbjct: 181 LLQG--EYPPQLSYTELAAKSGGLALPYFNGTGTVQ 214

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>MCPH1_COLGU (P61590) Microcephalin|
          Length = 841

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 15/41 (36%), Positives = 18/41 (43%)
 Frame = -1

Query: 397 GRRWRAALKVTE*QAPRVRLSCCRTEAPLPRRTACAPSGTG 275
           GR   + +   E  AP   L CCR   P  +  AC P G G
Sbjct: 491 GRATLSGVTSEESSAPEETLRCCRQAGPQQKEGAC-PEGNG 530

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>Y1709_RALSO (Q8XYP9) UPF0209 protein RSc1709|
          Length = 657

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
 Frame = +3

Query: 222 PVEYVESGTDQP-----GDGMVLPVPEGAHAVRLGS 314
           PV  +E G   P     GDG +LP   GA  VR+GS
Sbjct: 477 PVAALEDGVPWPRAVVCGDGYLLPRERGAPTVRVGS 512

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>TRPS1_MOUSE (Q925H1) Zinc finger transcription factor Trps1|
          Length = 1281

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = -1

Query: 328 RTEAPLPRRTACAPSGTGRTMPSPGWSVPDSTYSTGPV 215
           R EA  P+  AC PSG            P +T  TGPV
Sbjct: 130 RAEADDPQDMACTPSGDSLETKEEHKMSPKATEETGPV 167

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>PDZK3_RAT (Q9QZR8) PDZ domain-containing protein 3 (PDZ domain-containing|
            protein 2) (Plakophilin-related armadillo repeat
            protein-interacting PDZ protein)
          Length = 2766

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 37/130 (28%), Positives = 52/130 (40%), Gaps = 29/130 (22%)
 Frame = -1

Query: 310  PRRTACAPSGTGRTMPSPGWSVPDSTYSTGPVAFQ*GMACAPVTLVPFICDL-------L 152
            PR  A  P  + R   +PG    DS+ ST  +A       AP T +P    +       L
Sbjct: 1233 PREKASTPPDSSRAWAAPG----DSSPSTRRIAVPMSTGAAPATAIPQASLVSQERSRGL 1288

Query: 151  GGYSK--------LPFS--SGPSTSGTARAAVKASNSSA-----ATQRA-------PLTT 38
             G SK        +P S   G     TA A+ K S++S+     AT+R        P+T 
Sbjct: 1289 SGPSKGLGTKELCIPKSLKDGALLEDTAPASGKMSHASSPSGPVATERTLSGSPENPVTD 1348

Query: 37   IDRSISASGD 8
            ID  I  + +
Sbjct: 1349 IDNFIEEASE 1358

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>NAC74_ORYSA (Q7GCL7) NAC domain-containing protein 74 (ONAC074)|
          Length = 489

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 15/46 (32%), Positives = 20/46 (43%)
 Frame = +3

Query: 153 NRSQMNGTRVTGAHAIPYWKATGPVEYVESGTDQPGDGMVLPVPEG 290
           +R   NG+R   A    YWK+TG    ++ G    G    L   EG
Sbjct: 74  DRKYPNGSRSNRATVAGYWKSTGKDRAIKMGKQTIGTKKTLVFHEG 119

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>STE7_SCHPO (Q10136) Protein ste7|
          Length = 569

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 29/103 (28%), Positives = 42/103 (40%)
 Frame = -1

Query: 310 PRRTACAPSGTGRTMPSPGWSVPDSTYSTGPVAFQ*GMACAPVTLVPFICDLLGGYSKLP 131
           P +   +P       PSP  S P +  +  P        C+P   V F+ +L  G  KL 
Sbjct: 378 PVKHGVSPPSLAGNQPSP-LSSPLTNSNVSPSTI-----CSPDNNVTFV-NLAPG-EKLT 429

Query: 130 FSSGPSTSGTARAAVKASNSSAATQRAPLTTIDRSISASGDRS 2
           F   P+        V+ SN  +   +   TT+  S S+SGD S
Sbjct: 430 FKIEPNDLMDEEEVVENSNMYSIPGKTVATTVCHSSSSSGDFS 472

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>IE18_PRVKA (P33479) Immediate-early protein IE180|
          Length = 1446

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 34/107 (31%), Positives = 42/107 (39%), Gaps = 2/107 (1%)
 Frame = -1

Query: 325 TEAPLPRRTACAPSGTGRTMPSPGWSVPDSTYSTGPVAFQ*GMACAPVTLVPFICDLLG- 149
           T A L    A AP G GR+ PS   S   S+ S GP A       AP    P   D +G 
Sbjct: 149 TPAALAAAEAGAPGGPGRSSPSAA-SPASSSGSPGPSA-------APRRWSPARGDPVGE 200

Query: 148 -GYSKLPFSSGPSTSGTARAAVKASNSSAATQRAPLTTIDRSISASG 11
            G +  P +  P     A AA  A    A    +P +     +SA G
Sbjct: 201 PGPAARPRTPAPPAQPAAVAAAPARRGPA----SPASPAAGPVSAPG 243

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>SCNAA_RABIT (O97741) Amiloride-sensitive sodium channel alpha-subunit|
           (Epithelial Na+ channel alpha subunit) (Alpha ENaC)
           (Nonvoltage-gated sodium channel 1 alpha subunit)
           (SCNEA) (Alpha NaCH)
          Length = 640

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 7/42 (16%)
 Frame = -1

Query: 289 PSGTGRTMPSPGWSVPDS------TYST-GPVAFQ*GMACAP 185
           P  T  ++P PG ++P S       Y+T GP   Q G ACAP
Sbjct: 596 PHPTSPSVPQPGPTLPPSLTAPPPAYATLGPCLSQSGSACAP 637

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>ARLY_DESVH (Q72D36) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)|
           (ASAL)
          Length = 460

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 18/80 (22%), Positives = 32/80 (40%)
 Frame = -1

Query: 253 WSVPDSTYSTGPVAFQ*GMACAPVTLVPFICDLLGGYSKLPFSSGPSTSGTARAAVKASN 74
           W+ P   Y   P A+  G +  P    P + +L+ G +   + +  +   T +      N
Sbjct: 261 WANPAFGYIFLPDAYATGSSIMPQKKNPDVAELMRGKTGRVYGALTTMLTTVKGLPMTYN 320

Query: 73  SSAATQRAPLTTIDRSISAS 14
                 + P    DR++SAS
Sbjct: 321 RDLQEDKEPFIDADRTVSAS 340

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>MODA_MYCTU (P0A5Y0) Molybdate-binding protein precursor|
          Length = 261

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
 Frame = -3

Query: 260 ARLVRPGLDVLHGAGGLPVGDGV-RARHPRAVHLRPVGRVLEVAVQQRAIYVGNS 99
           A L RPGL+V+     +P G    R      +HL PV   L V      +  G +
Sbjct: 137 ADLTRPGLNVVVCQPSVPCGSATRRIEDATGIHLNPVSEELSVTDVLNKVITGQA 191

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>MODA_MYCBO (P0A5Y1) Molybdate-binding protein precursor|
          Length = 261

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
 Frame = -3

Query: 260 ARLVRPGLDVLHGAGGLPVGDGV-RARHPRAVHLRPVGRVLEVAVQQRAIYVGNS 99
           A L RPGL+V+     +P G    R      +HL PV   L V      +  G +
Sbjct: 137 ADLTRPGLNVVVCQPSVPCGSATRRIEDATGIHLNPVSEELSVTDVLNKVITGQA 191

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>MCHR1_PANTR (Q5IJ49) Melanin-concentrating hormone receptor 1 (MCH receptor 1)|
           (MCHR-1) (MCH-R1) (MCH1R) (MCH-1R) (MCHR) (G-protein
           coupled receptor 24)
          Length = 422

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
 Frame = -1

Query: 322 EAPLPRRTACAPSGTGR--TMPSPGW 251
           E PLP   ACAP   GR   +P P W
Sbjct: 27  EDPLPNCGACAPGQGGRRWRLPQPAW 52

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>MCHR1_HUMAN (Q99705) Melanin-concentrating hormone receptor 1 (MCH receptor 1)|
           (MCHR-1) (MCH-R1) (MCH1R) (MCH-1R) (MCHR) (G-protein
           coupled receptor 24) (Somatostatin receptor-like
           protein) (SLC-1)
          Length = 422

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
 Frame = -1

Query: 322 EAPLPRRTACAPSGTGR--TMPSPGW 251
           E PLP   ACAP   GR   +P P W
Sbjct: 27  EDPLPNCGACAPGQGGRRWRLPQPAW 52

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>FIBP_ADE12 (P36711) Fiber protein (pIV)|
          Length = 587

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 18/36 (50%), Positives = 22/36 (61%)
 Frame = -1

Query: 127 SSGPSTSGTARAAVKASNSSAATQRAPLTTIDRSIS 20
           S G   S +A  AVKAS  +  T RAPLTT D S++
Sbjct: 100 SQGLKLSWSAPLAVKASALTLNT-RAPLTTTDESLA 134

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>ENC_DROME (Q8MSX1) Protein encore|
          Length = 1818

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
 Frame = -1

Query: 124 SGPSTSGTARA-----AVKASNSSAATQRAPLTTIDRSISAS 14
           SGP  +GTA A      V A+ S AAT    + TI  S S+S
Sbjct: 67  SGPVAAGTATAVATGSTVTAATSVAATTSTSVATISTSCSSS 108

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>DPH2_ASHGO (Q757B6) Diphthamide biosynthesis protein 2|
          Length = 582

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 8/60 (13%)
 Frame = -1

Query: 382 AALKVTE*QAPRVRLSCCRTEAPLPRRTACAPSGTGRTMPSPG--------WSVPDSTYS 227
           +AL   E QA    L C RT+AP    T C+  GT +T             W + D+ YS
Sbjct: 84  SALVAEELQALLPDLQCARTDAPAQADTTCS-CGTQKTCADSKDSADGRKIWILADTAYS 142

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>CIC_MOUSE (Q924A2) Protein capicua homolog|
          Length = 1606

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 26/99 (26%), Positives = 39/99 (39%)
 Frame = -1

Query: 343  RLSCCRTEAPLPRRTACAPSGTGRTMPSPGWSVPDSTYSTGPVAFQ*GMACAPVTLVPFI 164
            +L      AP P   A APSG   T  S  +++P  T + G V      A AP   +P +
Sbjct: 833  QLQVAPAPAPAPGTKAAAPSGPAPT-TSIRFTLPPGTSTNGKVL----AATAPTAGIPIL 887

Query: 163  CDLLGGYSKLPFSSGPSTSGTARAAVKASNSSAATQRAP 47
              +          S P     + + V+A+ S  + Q  P
Sbjct: 888  QSV---------PSAPPPKAQSVSPVQATPSGGSAQLLP 917

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>ADPR_RHOER (Q01357) ATP-dependent protease ATP-binding subunit-like protein|
          Length = 351

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 10/63 (15%)
 Frame = -3

Query: 272 DHAVARLVRPGLDVLHGAGGL----------PVGDGVRARHPRAVHLRPVGRVLEVAVQQ 123
           D AVA L R G D ++GA GL          PV   V       + LRPVG    +A+Q 
Sbjct: 287 DSAVALLQRRGFDPVYGARGLRRTIRNVLADPVAGAV-------LDLRPVG-TQPLALQA 338

Query: 122 RAI 114
           RA+
Sbjct: 339 RAV 341

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>FAS_BOVIN (Q71SP7) Fatty acid synthase (EC 2.3.1.85) [Includes:|
            [Acyl-carrier-protein] S-acetyltransferase (EC 2.3.1.38);
            [Acyl-carrier-protein] S-malonyltransferase (EC
            2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase (EC
            2.3.1.41); 3-oxoacyl-[acyl-
          Length = 2513

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = -3

Query: 248  RPGLDVLHGAGGLPVGDGVRARHPRAVHLRPVGRVLEVAVQQRAIYVGN 102
            R G+ VL     +   DG R+    A  L PVG +  +AV  R   + N
Sbjct: 1936 RQGVQVLVSTSDVSTLDGTRSLITEAAQLGPVGGIFNLAVVLRDAMLDN 1984

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>BPL1_MOUSE (Q920N2) Biotin--protein ligase (EC 6.3.4.-) (Biotin apo-protein|
           ligase) [Includes:
           Biotin--[methylmalonyl-CoA-carboxytransferase] ligase
           (EC 6.3.4.9); Biotin--[propionyl-CoA-carboxylase
           [ATP-hydrolyzing]] ligase (EC 6.3.4.10) (Holocarboxylase
          Length = 722

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = -1

Query: 322 EAPLPRRTACAPSGTGRTMPSPGWSVPD 239
           E P PRR  CAP         PG S P+
Sbjct: 70  EGPSPRRRGCAPESEPAADGDPGLSSPE 97

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>ARI1B_HUMAN (Q8NFD5) AT-rich interactive domain-containing protein 1B (ARID|
            domain-containing protein 1B) (Osa homolog 2) (hOsa2)
            (p250R) (BRG1-binding protein hELD/OSA1) (BRG1-associated
            factor 250b) (BAF250B)
          Length = 2236

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = +3

Query: 126  LNGNFEYPPNRSQMNGTRVTGAHAIPYWKATGPVEYVESGTDQPGDGM 269
            + G + YP +R +M G      H IP     GP++   S ++ P   M
Sbjct: 1406 IQGQYPYPYSRERMQGPGQIQTHGIPPQMMGGPLQ--SSSSEGPQQNM 1451

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>NAC48_ORYSA (Q7F2L3) NAC domain-containing protein 48 (ONAC048)|
          Length = 303

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +3

Query: 138 FEYPPNRSQMNGTRVTGAHAIPYWKATG 221
           F  P +R   NG+R   A    YWKATG
Sbjct: 67  FFSPRDRKYPNGSRPNRAAGSGYWKATG 94

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>ATKB_HALSA (P57699) Potassium-transporting ATPase B chain (EC 3.6.3.12)|
           (Potassium-translocating ATPase B chain) (ATP
           phosphohydrolase [potassium-transporting] B chain)
           (Potassium-binding and translocating subunit B)
          Length = 719

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 14/62 (22%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
 Frame = -1

Query: 169 FICDLLGGYSKLPFSS--------GPSTSGTARAAVKASNSSAATQRAPLTTIDRSISAS 14
           ++   +GG++ L  +          P+T G   AA++ +  +  T+R  +    R++ A+
Sbjct: 250 YLASFVGGFAGLDVAELVALLVALMPTTIGALLAAIRVAGMTRVTRRNVIAKSGRAVEAA 309

Query: 13  GD 8
           GD
Sbjct: 310 GD 311

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>TYCC_BREPA (O30409) Tyrocidine synthetase 3 (Tyrocidine synthetase III)|
            [Includes: ATP-dependent asparagine adenylase (AsnA)
            (Asparagine activase); ATP-dependent glutamine adenylase
            (GlnA) (Glutamine activase); ATP-dependent tyrosine
            adenylase (TyrA) (Ty
          Length = 6486

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
 Frame = -1

Query: 220  PVAFQ*GMACAPVT-LVPFICDLLGGYSKLPFSSGPSTSGTARAAVKASNSSAATQRAPL 44
            P  FQ  + C+  T      C  LGG  KLP      T      A++ +N    T+ + +
Sbjct: 5899 PSLFQAILDCSTTTDFNQLRCVTLGG-EKLPVQLVQKTK-EKHPAIEINNEYGPTENSVV 5956

Query: 43   TTIDRSISA 17
            TTI RSI A
Sbjct: 5957 TTISRSIEA 5965

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>SDC3_CHICK (P26261) Syndecan-3 precursor|
          Length = 405

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 27/104 (25%), Positives = 39/104 (37%)
 Frame = -1

Query: 325 TEAPLPRRTACAPSGTGRTMPSPGWSVPDSTYSTGPVAFQ*GMACAPVTLVPFICDLLGG 146
           T  PLP   A  P    + M +P    P  T  T P      +    +T  P I      
Sbjct: 78  TSVPLPTTVAVLPVTLVQPMATPFELFP--TEDTSPEQTTSVLYIPKITEAPVIPSWKTT 135

Query: 145 YSKLPFSSGPSTSGTARAAVKASNSSAATQRAPLTTIDRSISAS 14
            +    S  PST+ T       + ++AAT     TTI  +++ S
Sbjct: 136 TASTTASDSPSTTST-------TTTTAATTTTTTTTISTTVATS 172

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>VGLG_HHV2H (P13290) Glycoprotein G|
          Length = 699

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 29/103 (28%), Positives = 39/103 (37%), Gaps = 4/103 (3%)
 Frame = -1

Query: 337 SCCRTEAPLPRRTACAPSGTGRTMPSPGWSVPDST----YSTGPVAFQ*GMACAPVTLVP 170
           S  +T    P  T   P+ T  T P P    P +T     + GPV    G + AP    P
Sbjct: 442 SAAKTPPTTPAPTTPPPTSTHAT-PRPTTPGPQTTPPGPATPGPV----GASAAPTADSP 496

Query: 169 FICDLLGGYSKLPFSSGPSTSGTARAAVKASNSSAATQRAPLT 41
                    S    + GPS +  + AA  A+  +  T R P T
Sbjct: 497 LTA------SPPATAPGPSAANVSVAATTATPGTRGTARTPPT 533

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>NRG2_MOUSE (P56974) Pro-neuregulin-2, membrane-bound isoform precursor|
           (Pro-NRG2) [Contains: Neuregulin-2 (NRG-2) (Divergent of
           neuregulin 1) (DON-1)]
          Length = 756

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = -1

Query: 316 PLPRRTACAPSGTGRTMPSPGWSVP-DSTYST 224
           P PRR+ACA  G+  ++P+  + +P D  Y T
Sbjct: 590 PGPRRSACALGGSLGSLPASPFRIPEDDEYET 621

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>SMY1_YEAST (P32364) Kinesin-related protein SMY1 (Suppressor protein SMY1)|
          Length = 656

 Score = 27.3 bits (59), Expect = 8.9
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
 Frame = -1

Query: 172 PFICDLLGGYSKLPFSSGPSTSGTARAAVKASNSSAATQRAPLT---TIDRSISASGD 8
           P I D+L GY+    + GPS SG + + + +  S         T   T++++    GD
Sbjct: 97  PIINDVLNGYNGTVITYGPSFSGKSYSLIGSKESEGILPNICKTLFDTLEKNEETKGD 154


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,748,998
Number of Sequences: 219361
Number of extensions: 981310
Number of successful extensions: 4194
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 4026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4186
length of database: 80,573,946
effective HSP length: 110
effective length of database: 56,444,236
effective search space used: 1354661664
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result