ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart55e12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479205.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1049 Score = 523 bits (264), Expect = e-145 Identities = 366/400 (91%) Strand = Plus / Plus Query: 179 ggaggtggttgctgagaacatgttgggtgacaagaaagtcacagtagtatttgttcttgg 238 ||||| |||||||||||||||||||||||| |||||||| ||||| ||||||||||| || Sbjct: 187 ggagggggttgctgagaacatgttgggtgataagaaagttacagttgtatttgttctagg 246 Query: 239 tggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattcac 298 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 tggtcctggaagtggaaaaggcacacagtgtgccaacattgtggaacactttggattcac 306 Query: 299 ccatcttagtgctggagatcttttgcgcgcggagattaaatctggctctgagaatggaac 358 ||| | ||||||||||| |||||||| || ||||| |||||||| |||||||||||||| Sbjct: 307 ccacttaagtgctggagaccttttgcgtgcagagataaaatctggttctgagaatggaac 366 Query: 359 tatgattgagaacatgataaaggagggaaagattgttccatcggaggtgactataaagct 418 ||||||||||||||||||||||||||| ||||||||||| || ||||| ||||||||||| Sbjct: 367 tatgattgagaacatgataaaggaggggaagattgttccgtcagaggttactataaagct 426 Query: 419 cttgcagcaagccatgataaagaatgagaatgataagttcctcatcgacgggtttccaag 478 |||||| | |||||||| || ||||||||||||||||| || ||||| ||||| ||||| Sbjct: 427 cttgcaagatgccatgattaaaaatgagaatgataagtttctaatcgatgggttcccaag 486 Query: 479 gaatgaagagaatcgtgctgcgttcgagaatgttacaaaaatttcgcctgcatttgtgct 538 ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 487 gaatgaagagaatcgtgctgccttcgagaatgttacaaaaatttcccctgcatttgtgct 546 Query: 539 attctttaattgttccgaggaagagatggaaagacgtctt 578 ||| ||| | ||||| || ||||||||||||||||||||| Sbjct: 547 attttttgactgttctgaagaagagatggaaagacgtctt 586
>gb|AF187063.1|AF187063 Oryza sativa UMP/CMP kinase b (ura6) mRNA, complete cds Length = 1203 Score = 523 bits (264), Expect = e-145 Identities = 366/400 (91%) Strand = Plus / Plus Query: 179 ggaggtggttgctgagaacatgttgggtgacaagaaagtcacagtagtatttgttcttgg 238 ||||| |||||||||||||||||||||||| |||||||| ||||| ||||||||||| || Sbjct: 179 ggagggggttgctgagaacatgttgggtgataagaaagttacagttgtatttgttctagg 238 Query: 239 tggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattcac 298 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 239 tggtcctggaagtggaaaaggcacacagtgtgccaacattgtggaacactttggattcac 298 Query: 299 ccatcttagtgctggagatcttttgcgcgcggagattaaatctggctctgagaatggaac 358 ||| | ||||||||||| |||||||| || ||||| |||||||| |||||||||||||| Sbjct: 299 ccacttaagtgctggagaccttttgcgtgcagagataaaatctggttctgagaatggaac 358 Query: 359 tatgattgagaacatgataaaggagggaaagattgttccatcggaggtgactataaagct 418 ||||||||||||||||||||||||||| ||||||||||| || ||||| ||||||||||| Sbjct: 359 tatgattgagaacatgataaaggaggggaagattgttccgtcagaggttactataaagct 418 Query: 419 cttgcagcaagccatgataaagaatgagaatgataagttcctcatcgacgggtttccaag 478 |||||| | |||||||| || ||||||||||||||||| || ||||| ||||| ||||| Sbjct: 419 cttgcaagatgccatgattaaaaatgagaatgataagtttctaatcgatgggttcccaag 478 Query: 479 gaatgaagagaatcgtgctgcgttcgagaatgttacaaaaatttcgcctgcatttgtgct 538 ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 479 gaatgaagagaatcgtgctgccttcgagaatgttacaaaaatttcccctgcatttgtgct 538 Query: 539 attctttaattgttccgaggaagagatggaaagacgtctt 578 ||| ||| | ||||| || ||||||||||||||||||||| Sbjct: 539 attttttgactgttctgaagaagagatggaaagacgtctt 578
>gb|AF187062.1|AF187062 Oryza sativa UMP/CMP kinase a (ura6) mRNA, complete cds Length = 1148 Score = 523 bits (264), Expect = e-145 Identities = 366/400 (91%) Strand = Plus / Plus Query: 179 ggaggtggttgctgagaacatgttgggtgacaagaaagtcacagtagtatttgttcttgg 238 ||||| |||||||||||||||||||||||| |||||||| ||||| ||||||||||| || Sbjct: 172 ggagggggttgctgagaacatgttgggtgataagaaagttacagttgtatttgttctagg 231 Query: 239 tggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattcac 298 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 232 tggtcctggaagtggaaaaggcacacagtgtgccaacattgtggaacactttggattcac 291 Query: 299 ccatcttagtgctggagatcttttgcgcgcggagattaaatctggctctgagaatggaac 358 ||| | ||||||||||| |||||||| || ||||| |||||||| |||||||||||||| Sbjct: 292 ccacttaagtgctggagaccttttgcgtgcagagataaaatctggttctgagaatggaac 351 Query: 359 tatgattgagaacatgataaaggagggaaagattgttccatcggaggtgactataaagct 418 ||||||||||||||||||||||||||| ||||||||||| || ||||| ||||||||||| Sbjct: 352 tatgattgagaacatgataaaggaggggaagattgttccgtcagaggttactataaagct 411 Query: 419 cttgcagcaagccatgataaagaatgagaatgataagttcctcatcgacgggtttccaag 478 |||||| | |||||||| || ||||||||||||||||| || ||||| ||||| ||||| Sbjct: 412 cttgcaagatgccatgattaaaaatgagaatgataagtttctaatcgatgggttcccaag 471 Query: 479 gaatgaagagaatcgtgctgcgttcgagaatgttacaaaaatttcgcctgcatttgtgct 538 ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 472 gaatgaagagaatcgtgctgccttcgagaatgttacaaaaatttcccctgcatttgtgct 531 Query: 539 attctttaattgttccgaggaagagatggaaagacgtctt 578 ||| ||| | ||||| || ||||||||||||||||||||| Sbjct: 532 attttttgactgttctgaagaagagatggaaagacgtctt 571
>dbj|AK072973.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149K03, full insert sequence Length = 1048 Score = 523 bits (264), Expect = e-145 Identities = 366/400 (91%) Strand = Plus / Plus Query: 179 ggaggtggttgctgagaacatgttgggtgacaagaaagtcacagtagtatttgttcttgg 238 ||||| |||||||||||||||||||||||| |||||||| ||||| ||||||||||| || Sbjct: 187 ggagggggttgctgagaacatgttgggtgataagaaagttacagttgtatttgttctagg 246 Query: 239 tggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattcac 298 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 tggtcctggaagtggaaaaggcacacagtgtgccaacattgtggaacactttggattcac 306 Query: 299 ccatcttagtgctggagatcttttgcgcgcggagattaaatctggctctgagaatggaac 358 ||| | ||||||||||| |||||||| || ||||| |||||||| |||||||||||||| Sbjct: 307 ccacttaagtgctggagaccttttgcgtgcagagataaaatctggttctgagaatggaac 366 Query: 359 tatgattgagaacatgataaaggagggaaagattgttccatcggaggtgactataaagct 418 ||||||||||||||||||||||||||| ||||||||||| || ||||| ||||||||||| Sbjct: 367 tatgattgagaacatgataaaggaggggaagattgttccgtcagaggttactataaagct 426 Query: 419 cttgcagcaagccatgataaagaatgagaatgataagttcctcatcgacgggtttccaag 478 |||||| | |||||||| || ||||||||||||||||| || ||||| ||||| ||||| Sbjct: 427 cttgcaagatgccatgattaaaaatgagaatgataagtttctaatcgatgggttcccaag 486 Query: 479 gaatgaagagaatcgtgctgcgttcgagaatgttacaaaaatttcgcctgcatttgtgct 538 ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 487 gaatgaagagaatcgtgctgccttcgagaatgttacaaaaatttcccctgcatttgtgct 546 Query: 539 attctttaattgttccgaggaagagatggaaagacgtctt 578 ||| ||| | ||||| || ||||||||||||||||||||| Sbjct: 547 attttttgactgttctgaagaagagatggaaagacgtctt 586
>gb|BT017816.1| Zea mays clone EL01N0507E06.c mRNA sequence Length = 1311 Score = 504 bits (254), Expect = e-139 Identities = 397/445 (89%), Gaps = 6/445 (1%) Strand = Plus / Plus Query: 133 gagccatgggcacggttgtggatgctcccgcagctgtgactgagaaggaggtggttgctg 192 ||||||||||||| |||||||||||||| |||| |||| |||| ||| | ||| Sbjct: 135 gagccatgggcacagttgtggatgctccagcagttgtggctgaagagg------tcactg 188 Query: 193 agaacatgttgggtgacaagaaagtcacagtagtatttgttcttggtggtcctggaagtg 252 ||||||||||||||| |||||||| |||| ||||||||||| |||||||||||||||| Sbjct: 189 agaacatgttgggtggtaagaaagttacagctgtatttgttctaggtggtcctggaagtg 248 Query: 253 gaaagggcacacagtgtgccaacattgtggaacactttggattcacccatcttagtgctg 312 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 249 gaaaaggcacacagtgtgccaacattgtggaacactttggattcacccatcttagtgctg 308 Query: 313 gagatcttttgcgcgcggagattaaatctggctctgagaatggaactatgattgagaaca 372 ||||||||||||| || ||||||||||||||||||||||||||||| |||||||| |||| Sbjct: 309 gagatcttttgcgtgctgagattaaatctggctctgagaatggaaccatgattgaaaaca 368 Query: 373 tgataaaggagggaaagattgttccatcggaggtgactataaagctcttgcagcaagcca 432 |||||||||||||||||||||||||||| ||||||||||||||||| |||||| | || | Sbjct: 369 tgataaaggagggaaagattgttccatcagaggtgactataaagctgttgcaggaggcaa 428 Query: 433 tgataaagaatgagaatgataagttcctcatcgacgggtttccaaggaatgaagagaatc 492 ||||||| ||||| ||||| || ||||| |||||||| |||||||||||||| ||||||| Sbjct: 429 tgataaaaaatgaaaatgacaaattcctgatcgacggatttccaaggaatgaggagaatc 488 Query: 493 gtgctgcgttcgagaatgttacaaaaatttcgcctgcatttgtgctattctttaattgtt 552 |||| || || ||||||||||| |||||||| ||||||||||||||||||||| | |||| Sbjct: 489 gtgcagcatttgagaatgttaccaaaatttctcctgcatttgtgctattctttgactgtt 548 Query: 553 ccgaggaagagatggaaagacgtct 577 | ||| |||||||||| | |||||| Sbjct: 549 ctgagaaagagatggagaaacgtct 573
>ref|XM_468084.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1088 Score = 486 bits (245), Expect = e-134 Identities = 395/445 (88%) Strand = Plus / Plus Query: 134 agccatgggcacggttgtggatgctcccgcagctgtgactgagaaggaggtggttgctga 193 ||||||||| |||||||||||||||| ||| |||| ||| |||||| ||| |||| Sbjct: 43 agccatgggttcggttgtggatgctccaacagttgtggctggacaggaggaggtcactga 102 Query: 194 gaacatgttgggtgacaagaaagtcacagtagtatttgttcttggtggtcctggaagtgg 253 ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||| ||||| Sbjct: 103 caacatgttgggtgacaagaaagttacagttgtatttgttctaggtggtcctgggagtgg 162 Query: 254 aaagggcacacagtgtgccaacattgtggaacactttggattcacccatcttagtgctgg 313 ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 163 aaagggcacacagtgtgccaacattgttgaacactttggattcattcatcttagtgctgg 222 Query: 314 agatcttttgcgcgcggagattaaatctggctctgagaatggaactatgattgagaacat 373 ||| |||||||| || ||||| ||||||||||||||||| ||||||||||| |||||||| Sbjct: 223 agaccttttgcgtgcagagatcaaatctggctctgagaacggaactatgatcgagaacat 282 Query: 374 gataaaggagggaaagattgttccatcggaggtgactataaagctcttgcagcaagccat 433 ||||||||||||||||||||||||||| ||||| |||||||| ||||||||| ||||||| Sbjct: 283 gataaaggagggaaagattgttccatctgaggtaactataaaactcttgcaggaagccat 342 Query: 434 gataaagaatgagaatgataagttcctcatcgacgggtttccaaggaatgaagagaatcg 493 ||| || | || |||||||||||||| || || || ||||||||||| ||||||||||| Sbjct: 343 gattaaaagtggaaatgataagttccttattgatggatttccaaggaacgaagagaatcg 402 Query: 494 tgctgcgttcgagaatgttacaaaaatttcgcctgcatttgtgctattctttaattgttc 553 |||||| || ||||| ||||||||||| | ||||| |||||||||||||| ||||||| Sbjct: 403 tgctgcatttgagaacgttacaaaaataactcctgcgtttgtgctattcttcgattgttc 462 Query: 554 cgaggaagagatggaaagacgtctt 578 |||||||||||||||||||||||| Sbjct: 463 tgaggaagagatggaaagacgtctt 487
>dbj|AK103372.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033127A22, full insert sequence Length = 1134 Score = 486 bits (245), Expect = e-134 Identities = 395/445 (88%) Strand = Plus / Plus Query: 134 agccatgggcacggttgtggatgctcccgcagctgtgactgagaaggaggtggttgctga 193 ||||||||| |||||||||||||||| ||| |||| ||| |||||| ||| |||| Sbjct: 90 agccatgggttcggttgtggatgctccaacagttgtggctggacaggaggaggtcactga 149 Query: 194 gaacatgttgggtgacaagaaagtcacagtagtatttgttcttggtggtcctggaagtgg 253 ||||||||||||||||||||||| ||||| ||||||||||| ||||||||||| ||||| Sbjct: 150 caacatgttgggtgacaagaaagttacagttgtatttgttctaggtggtcctgggagtgg 209 Query: 254 aaagggcacacagtgtgccaacattgtggaacactttggattcacccatcttagtgctgg 313 ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 210 aaagggcacacagtgtgccaacattgttgaacactttggattcattcatcttagtgctgg 269 Query: 314 agatcttttgcgcgcggagattaaatctggctctgagaatggaactatgattgagaacat 373 ||| |||||||| || ||||| ||||||||||||||||| ||||||||||| |||||||| Sbjct: 270 agaccttttgcgtgcagagatcaaatctggctctgagaacggaactatgatcgagaacat 329 Query: 374 gataaaggagggaaagattgttccatcggaggtgactataaagctcttgcagcaagccat 433 ||||||||||||||||||||||||||| ||||| |||||||| ||||||||| ||||||| Sbjct: 330 gataaaggagggaaagattgttccatctgaggtaactataaaactcttgcaggaagccat 389 Query: 434 gataaagaatgagaatgataagttcctcatcgacgggtttccaaggaatgaagagaatcg 493 ||| || | || |||||||||||||| || || || ||||||||||| ||||||||||| Sbjct: 390 gattaaaagtggaaatgataagttccttattgatggatttccaaggaacgaagagaatcg 449 Query: 494 tgctgcgttcgagaatgttacaaaaatttcgcctgcatttgtgctattctttaattgttc 553 |||||| || ||||| ||||||||||| | ||||| |||||||||||||| ||||||| Sbjct: 450 tgctgcatttgagaacgttacaaaaataactcctgcgtttgtgctattcttcgattgttc 509 Query: 554 cgaggaagagatggaaagacgtctt 578 |||||||||||||||||||||||| Sbjct: 510 tgaggaagagatggaaagacgtctt 534
>gb|AY105887.1| Zea mays PCO123975 mRNA sequence Length = 1471 Score = 466 bits (235), Expect = e-128 Identities = 343/379 (90%) Strand = Plus / Plus Query: 190 ctgagaacatgttgggtgacaagaaagtcacagtagtatttgttcttggtggtcctggaa 249 |||||||||||||||||| ||||||||| ||||| |||||||| || ||||||||||||| Sbjct: 419 ctgagaacatgttgggtggcaagaaagttacagttgtatttgtcctaggtggtcctggaa 478 Query: 250 gtggaaagggcacacagtgtgccaacattgtggaacactttggattcacccatcttagtg 309 ||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||||| Sbjct: 479 gtggaaaaggcacacagtgtgccaacatcgtggagcactttggattcacccatcttagtg 538 Query: 310 ctggagatcttttgcgcgcggagattaaatctggctctgagaatggaactatgattgaga 369 ||||||||||| |||| || ||||||||||||||||||||||| ||||| |||||||||| Sbjct: 539 ctggagatcttctgcgtgcagagattaaatctggctctgagaacggaaccatgattgaga 598 Query: 370 acatgataaaggagggaaagattgttccatcggaggtgactataaagctcttgcagcaag 429 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | | Sbjct: 599 acatgataaaggagggaaagattgttccatcggaggtgactataaagcttttgcaggagg 658 Query: 430 ccatgataaagaatgagaatgataagttcctcatcgacgggtttccaaggaatgaagaga 489 | |||||||| | ||| ||||| || ||||| ||||| || |||||||||||||| |||| Sbjct: 659 caatgataaaaagtgaaaatgacaaattcctgatcgatggatttccaaggaatgaggaga 718 Query: 490 atcgtgctgcgttcgagaatgttacaaaaatttcgcctgcatttgtgctattctttaatt 549 ||||||| || || ||||||||||| |||||||| ||||||||||||||||||||| | | Sbjct: 719 atcgtgcagcctttgagaatgttaccaaaatttctcctgcatttgtgctattctttgact 778 Query: 550 gttccgaggaagagatgga 568 |||| || ||||| ||||| Sbjct: 779 gttctgaagaagatatgga 797 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 133 gagccatgggcacggttgtggatgc 157 ||||||||||||| ||||||||||| Sbjct: 368 gagccatgggcacagttgtggatgc 392
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 202 bits (102), Expect = 9e-49 Identities = 144/158 (91%) Strand = Plus / Minus Query: 355 gaactatgattgagaacatgataaaggagggaaagattgttccatcggaggtgactataa 414 ||||||||||||||||||||||||||||||| ||||||||||| || ||||| ||||||| Sbjct: 25826952 gaactatgattgagaacatgataaaggaggggaagattgttccgtcagaggttactataa 25826893 Query: 415 agctcttgcagcaagccatgataaagaatgagaatgataagttcctcatcgacgggtttc 474 |||||||||| | |||||||| || ||||||||||||||||| || ||||| ||||| | Sbjct: 25826892 agctcttgcaagatgccatgattaaaaatgagaatgataagtttctaatcgatgggttcc 25826833 Query: 475 caaggaatgaagagaatcgtgctgcgttcgagaatgtt 512 ||||||||||||||||||||||||| |||||||||||| Sbjct: 25826832 caaggaatgaagagaatcgtgctgccttcgagaatgtt 25826795 Score = 165 bits (83), Expect = 2e-37 Identities = 110/119 (92%) Strand = Plus / Minus Query: 237 ggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattc 296 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 25827178 ggtggtcctggaagtggaaaaggcacacagtgtgccaacattgtggaacactttggattc 25827119 Query: 297 acccatcttagtgctggagatcttttgcgcgcggagattaaatctggctctgagaatgg 355 ||||| | ||||||||||| |||||||| || ||||| |||||||| ||||||||||| Sbjct: 25827118 acccacttaagtgctggagaccttttgcgtgcagagataaaatctggttctgagaatgg 25827060 Score = 83.8 bits (42), Expect = 6e-13 Identities = 60/66 (90%) Strand = Plus / Minus Query: 513 acaaaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaaga 572 ||||||||||| ||||||||||||||||| ||| | ||||| || ||||||||||||||| Sbjct: 25826635 acaaaaatttcccctgcatttgtgctattttttgactgttctgaagaagagatggaaaga 25826576 Query: 573 cgtctt 578 |||||| Sbjct: 25826575 cgtctt 25826570 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 185 ggttgctgagaacatgttgggtgacaagaaagtcacagtagtatttgttct 235 |||||||||||||||||||||||| |||||||| ||||| ||||||||||| Sbjct: 25827337 ggttgctgagaacatgttgggtgataagaaagttacagttgtatttgttct 25827287
>dbj|AP004341.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524E08 Length = 154696 Score = 202 bits (102), Expect = 9e-49 Identities = 144/158 (91%) Strand = Plus / Minus Query: 355 gaactatgattgagaacatgataaaggagggaaagattgttccatcggaggtgactataa 414 ||||||||||||||||||||||||||||||| ||||||||||| || ||||| ||||||| Sbjct: 144114 gaactatgattgagaacatgataaaggaggggaagattgttccgtcagaggttactataa 144055 Query: 415 agctcttgcagcaagccatgataaagaatgagaatgataagttcctcatcgacgggtttc 474 |||||||||| | |||||||| || ||||||||||||||||| || ||||| ||||| | Sbjct: 144054 agctcttgcaagatgccatgattaaaaatgagaatgataagtttctaatcgatgggttcc 143995 Query: 475 caaggaatgaagagaatcgtgctgcgttcgagaatgtt 512 ||||||||||||||||||||||||| |||||||||||| Sbjct: 143994 caaggaatgaagagaatcgtgctgccttcgagaatgtt 143957 Score = 165 bits (83), Expect = 2e-37 Identities = 110/119 (92%) Strand = Plus / Minus Query: 237 ggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattc 296 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 144340 ggtggtcctggaagtggaaaaggcacacagtgtgccaacattgtggaacactttggattc 144281 Query: 297 acccatcttagtgctggagatcttttgcgcgcggagattaaatctggctctgagaatgg 355 ||||| | ||||||||||| |||||||| || ||||| |||||||| ||||||||||| Sbjct: 144280 acccacttaagtgctggagaccttttgcgtgcagagataaaatctggttctgagaatgg 144222 Score = 83.8 bits (42), Expect = 6e-13 Identities = 60/66 (90%) Strand = Plus / Minus Query: 513 acaaaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaaga 572 ||||||||||| ||||||||||||||||| ||| | ||||| || ||||||||||||||| Sbjct: 143797 acaaaaatttcccctgcatttgtgctattttttgactgttctgaagaagagatggaaaga 143738 Query: 573 cgtctt 578 |||||| Sbjct: 143737 cgtctt 143732 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 185 ggttgctgagaacatgttgggtgacaagaaagtcacagtagtatttgttct 235 |||||||||||||||||||||||| |||||||| ||||| ||||||||||| Sbjct: 144499 ggttgctgagaacatgttgggtgataagaaagttacagttgtatttgttct 144449
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 170 bits (86), Expect = 3e-39 Identities = 137/154 (88%) Strand = Plus / Plus Query: 355 gaactatgattgagaacatgataaaggagggaaagattgttccatcggaggtgactataa 414 |||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 32971566 gaactatgatcgagaacatgataaaggagggaaagattgttccatctgaggtaactataa 32971625 Query: 415 agctcttgcagcaagccatgataaagaatgagaatgataagttcctcatcgacgggtttc 474 | ||||||||| |||||||||| || | || |||||||||||||| || || || |||| Sbjct: 32971626 aactcttgcaggaagccatgattaaaagtggaaatgataagttccttattgatggatttc 32971685 Query: 475 caaggaatgaagagaatcgtgctgcgttcgagaa 508 ||||||| ||||||||||||||||| || ||||| Sbjct: 32971686 caaggaacgaagagaatcgtgctgcatttgagaa 32971719 Score = 167 bits (84), Expect = 5e-38 Identities = 108/116 (93%) Strand = Plus / Plus Query: 237 ggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattc 296 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 32971299 ggtggtcctgggagtggaaagggcacacagtgtgccaacattgttgaacactttggattc 32971358 Query: 297 acccatcttagtgctggagatcttttgcgcgcggagattaaatctggctctgagaa 352 | ||||||||||||||||| |||||||| || ||||| ||||||||||||||||| Sbjct: 32971359 attcatcttagtgctggagaccttttgcgtgcagagatcaaatctggctctgagaa 32971414 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 525 cctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgtctt 578 ||||| |||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 32971902 cctgcgtttgtgctattcttcgattgttctgaggaagagatggaaagacgtctt 32971955 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 190 ctgagaacatgttgggtgacaagaaagtcacagtagtatttgttct 235 |||| ||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 32971066 ctgacaacatgttgggtgacaagaaagttacagttgtatttgttct 32971111
>dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1293_A01 Length = 139121 Score = 170 bits (86), Expect = 3e-39 Identities = 137/154 (88%) Strand = Plus / Plus Query: 355 gaactatgattgagaacatgataaaggagggaaagattgttccatcggaggtgactataa 414 |||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 17506 gaactatgatcgagaacatgataaaggagggaaagattgttccatctgaggtaactataa 17565 Query: 415 agctcttgcagcaagccatgataaagaatgagaatgataagttcctcatcgacgggtttc 474 | ||||||||| |||||||||| || | || |||||||||||||| || || || |||| Sbjct: 17566 aactcttgcaggaagccatgattaaaagtggaaatgataagttccttattgatggatttc 17625 Query: 475 caaggaatgaagagaatcgtgctgcgttcgagaa 508 ||||||| ||||||||||||||||| || ||||| Sbjct: 17626 caaggaacgaagagaatcgtgctgcatttgagaa 17659 Score = 167 bits (84), Expect = 5e-38 Identities = 108/116 (93%) Strand = Plus / Plus Query: 237 ggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattc 296 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 17239 ggtggtcctgggagtggaaagggcacacagtgtgccaacattgttgaacactttggattc 17298 Query: 297 acccatcttagtgctggagatcttttgcgcgcggagattaaatctggctctgagaa 352 | ||||||||||||||||| |||||||| || ||||| ||||||||||||||||| Sbjct: 17299 attcatcttagtgctggagaccttttgcgtgcagagatcaaatctggctctgagaa 17354 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 525 cctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgtctt 578 ||||| |||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 17842 cctgcgtttgtgctattcttcgattgttctgaggaagagatggaaagacgtctt 17895 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 190 ctgagaacatgttgggtgacaagaaagtcacagtagtatttgttct 235 |||| ||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 17006 ctgacaacatgttgggtgacaagaaagttacagttgtatttgttct 17051
>dbj|AP004140.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1534_E09 Length = 126209 Score = 167 bits (84), Expect = 5e-38 Identities = 108/116 (93%) Strand = Plus / Plus Query: 237 ggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattc 296 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 126040 ggtggtcctgggagtggaaagggcacacagtgtgccaacattgttgaacactttggattc 126099 Query: 297 acccatcttagtgctggagatcttttgcgcgcggagattaaatctggctctgagaa 352 | ||||||||||||||||| |||||||| || ||||| ||||||||||||||||| Sbjct: 126100 attcatcttagtgctggagaccttttgcgtgcagagatcaaatctggctctgagaa 126155 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 190 ctgagaacatgttgggtgacaagaaagtcacagtagtatttgttct 235 |||| ||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 125807 ctgacaacatgttgggtgacaagaaagttacagttgtatttgttct 125852
>ref|NM_180536.1| Arabidopsis thaliana ATP binding / nucleotide kinase/ phosphotransferase, phosphate group as acceptor / uridylate kinase AT5G26667 transcript variant AT5G26667.1 mRNA, complete cds Length = 875 Score = 121 bits (61), Expect = 3e-24 Identities = 160/193 (82%) Strand = Plus / Plus Query: 226 tatttgttcttggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaac 285 ||||||||||||||||||| ||||||||||| || || |||||||| | ||||| |||| Sbjct: 128 tatttgttcttggtggtccaggaagtggaaaaggtacccagtgtgcttatattgttgaac 187 Query: 286 actttggattcacccatcttagtgctggagatcttttgcgcgcggagattaaatctggct 345 | | ||| | ||| ||||| ||||||||||||||| | | || ||||||||||| || | Sbjct: 188 attatggttacacacatctgagtgctggagatcttcttagagctgagattaaatcaggtt 247 Query: 346 ctgagaatggaactatgattgagaacatgataaaggagggaaagattgttccatcggagg 405 |||| |||||||||||||| |||| ||||| || ||||| |||||||| || || |||| Sbjct: 248 ctgaaaatggaactatgatccagaatatgattaaagaggggaagattgtaccttctgagg 307 Query: 406 tgactataaagct 418 | ||||| ||||| Sbjct: 308 ttactatcaagct 320
>ref|NM_180537.1| Arabidopsis thaliana ATP binding / nucleotide kinase/ phosphotransferase, phosphate group as acceptor / uridylate kinase AT5G26667 transcript variant AT5G26667.2 mRNA, complete cds Length = 892 Score = 121 bits (61), Expect = 3e-24 Identities = 160/193 (82%) Strand = Plus / Plus Query: 226 tatttgttcttggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaac 285 ||||||||||||||||||| ||||||||||| || || |||||||| | ||||| |||| Sbjct: 128 tatttgttcttggtggtccaggaagtggaaaaggtacccagtgtgcttatattgttgaac 187 Query: 286 actttggattcacccatcttagtgctggagatcttttgcgcgcggagattaaatctggct 345 | | ||| | ||| ||||| ||||||||||||||| | | || ||||||||||| || | Sbjct: 188 attatggttacacacatctgagtgctggagatcttcttagagctgagattaaatcaggtt 247 Query: 346 ctgagaatggaactatgattgagaacatgataaaggagggaaagattgttccatcggagg 405 |||| |||||||||||||| |||| ||||| || ||||| |||||||| || || |||| Sbjct: 248 ctgaaaatggaactatgatccagaatatgattaaagaggggaagattgtaccttctgagg 307 Query: 406 tgactataaagct 418 | ||||| ||||| Sbjct: 308 ttactatcaagct 320
>ref|NM_001036865.1| Arabidopsis thaliana ATP binding / nucleotide kinase/ phosphotransferase, phosphate group as acceptor / uridylate kinase AT5G26667 transcript variant AT5G26667.3 mRNA, complete cds Length = 1059 Score = 121 bits (61), Expect = 3e-24 Identities = 160/193 (82%) Strand = Plus / Plus Query: 226 tatttgttcttggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaac 285 ||||||||||||||||||| ||||||||||| || || |||||||| | ||||| |||| Sbjct: 188 tatttgttcttggtggtccaggaagtggaaaaggtacccagtgtgcttatattgttgaac 247 Query: 286 actttggattcacccatcttagtgctggagatcttttgcgcgcggagattaaatctggct 345 | | ||| | ||| ||||| ||||||||||||||| | | || ||||||||||| || | Sbjct: 248 attatggttacacacatctgagtgctggagatcttcttagagctgagattaaatcaggtt 307 Query: 346 ctgagaatggaactatgattgagaacatgataaaggagggaaagattgttccatcggagg 405 |||| |||||||||||||| |||| ||||| || ||||| |||||||| || || |||| Sbjct: 308 ctgaaaatggaactatgatccagaatatgattaaagaggggaagattgtaccttctgagg 367 Query: 406 tgactataaagct 418 | ||||| ||||| Sbjct: 368 ttactatcaagct 380
>gb|AF000147.1|ATAF000147 Arabidopsis thaliana UMP/CMP kinase (pyr6) mRNA, complete cds Length = 895 Score = 121 bits (61), Expect = 3e-24 Identities = 160/193 (82%) Strand = Plus / Plus Query: 226 tatttgttcttggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaac 285 ||||||||||||||||||| ||||||||||| || || |||||||| | ||||| |||| Sbjct: 110 tatttgttcttggtggtccaggaagtggaaaaggtacccagtgtgcttatattgttgaac 169 Query: 286 actttggattcacccatcttagtgctggagatcttttgcgcgcggagattaaatctggct 345 | | ||| | ||| ||||| ||||||||||||||| | | || ||||||||||| || | Sbjct: 170 attatggttacacacatctgagtgctggagatcttcttagagctgagattaaatcaggtt 229 Query: 346 ctgagaatggaactatgattgagaacatgataaaggagggaaagattgttccatcggagg 405 |||| |||||||||||||| |||| ||||| || ||||| |||||||| || || |||| Sbjct: 230 ctgaaaatggaactatgatccagaatatgattaaagaggggaagattgtaccttctgagg 289 Query: 406 tgactataaagct 418 | ||||| ||||| Sbjct: 290 ttactatcaagct 302
>dbj|AK106691.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-C08, full insert sequence Length = 1595 Score = 89.7 bits (45), Expect = 9e-15 Identities = 144/177 (81%) Strand = Plus / Plus Query: 191 tgagaacatgttgggtgacaagaaagtcacagtagtatttgttcttggtggtcctggaag 250 ||||||||||||||||| ||||||||| | | | |||||||||| |||||||||||||| Sbjct: 198 tgagaacatgttgggtggcaagaaagttaaaattatatttgttctaggtggtcctggaag 257 Query: 251 tggaaagggcacacagtgtgccaacattgtggaacactttggattcacccatcttagtgc 310 |||||| || || ||||| ||| ||||| || || ||||| || | ||||||||| || Sbjct: 258 tggaaaaggaactcagtgcagcaatattgtagagcattttggttttatccatcttagcgc 317 Query: 311 tggagatcttttgcgcgcggagattaaatctggctctgagaatggaactatgattga 367 ||| || || ||||| || || || || ||||| || ||||| ||||| |||||||| Sbjct: 318 tggtgaactcttgcgtgcagaaatcaattctggttcagagaacggaaccatgattga 374
>gb|DQ430579.1| Sorghum propinquum locus S02089 genomic sequence Length = 737 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 516 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 575 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 576 ct 577 || Sbjct: 166 ct 167
>gb|DQ430578.1| Sorghum bicolor voucher PI585454 locus S02089 genomic sequence Length = 725 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 516 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 575 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 576 ct 577 || Sbjct: 166 ct 167
>gb|DQ430577.1| Sorghum bicolor voucher PI267539 locus S02089 genomic sequence Length = 725 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 516 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 575 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 576 ct 577 || Sbjct: 166 ct 167
>gb|DQ430576.1| Sorghum bicolor voucher PI267408 locus S02089 genomic sequence Length = 725 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 516 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 575 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 576 ct 577 || Sbjct: 166 ct 167
>gb|DQ430575.1| Sorghum bicolor voucher PI221607 locus S02089 genomic sequence Length = 725 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 516 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 575 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 576 ct 577 || Sbjct: 166 ct 167
>gb|DQ430574.1| Sorghum bicolor voucher PI152702 locus S02089 genomic sequence Length = 725 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 516 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 575 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 576 ct 577 || Sbjct: 166 ct 167
>gb|DQ430573.1| Sorghum bicolor voucher NSL87902b locus S02089 genomic sequence Length = 725 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 516 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 575 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 576 ct 577 || Sbjct: 166 ct 167
>gb|DQ430572.1| Sorghum bicolor voucher NSL87902a locus S02089 genomic sequence Length = 725 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 516 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 575 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 576 ct 577 || Sbjct: 166 ct 167
>gb|DQ430571.1| Sorghum bicolor voucher NSL87666 locus S02089 genomic sequence Length = 725 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 516 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 575 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 576 ct 577 || Sbjct: 166 ct 167
>gb|DQ430570.1| Sorghum bicolor voucher NSL77217 locus S02089 genomic sequence Length = 725 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 516 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 575 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 576 ct 577 || Sbjct: 166 ct 167
>gb|DQ430569.1| Sorghum bicolor voucher NSL77034 locus S02089 genomic sequence Length = 725 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 516 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 575 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 576 ct 577 || Sbjct: 166 ct 167
>gb|DQ430568.1| Sorghum bicolor voucher NSL56174 locus S02089 genomic sequence Length = 725 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 516 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 575 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 576 ct 577 || Sbjct: 166 ct 167
>gb|DQ430567.1| Sorghum bicolor voucher NSL56003 locus S02089 genomic sequence Length = 725 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 516 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 575 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 576 ct 577 || Sbjct: 166 ct 167
>gb|DQ430566.1| Sorghum bicolor voucher NSL55243 locus S02089 genomic sequence Length = 725 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 516 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 575 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 576 ct 577 || Sbjct: 166 ct 167
>gb|DQ430565.1| Sorghum bicolor voucher NSL51365 locus S02089 genomic sequence Length = 725 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 516 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 575 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 576 ct 577 || Sbjct: 166 ct 167
>gb|DQ430564.1| Sorghum bicolor voucher NSL51030 locus S02089 genomic sequence Length = 725 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 516 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 575 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 576 ct 577 || Sbjct: 166 ct 167
>gb|DQ430563.1| Sorghum bicolor voucher NSL50875 locus S02089 genomic sequence Length = 725 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 516 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 575 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 576 ct 577 || Sbjct: 166 ct 167
>gb|DQ430562.1| Sorghum bicolor voucher BTx623 locus S02089 genomic sequence Length = 725 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 516 aaaatttcgcctgcatttgtgctattctttaattgttccgaggaagagatggaaagacgt 575 |||||||| ||||| ||||||||||||||| | ||||| |||||||||||||| |||||| Sbjct: 106 aaaatttctcctgcgtttgtgctattctttgactgttctgaggaagagatggagagacgt 165 Query: 576 ct 577 || Sbjct: 166 ct 167
>gb|AC137518.1| Genomic sequence for Arabidopsis thaliana, clone T7I7, from chromosome 5, complete sequence Length = 22832 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 237 ggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattc 296 |||||||| ||||||||||| || || |||||||| | ||||| ||||| | ||| | | Sbjct: 10856 ggtggtccaggaagtggaaaaggtacccagtgtgcttatattgttgaacattatggttac 10915 Query: 297 acccatcttagtgctggagatcttttgcgcgcggagattaaatctggctctgagaatgg 355 || ||||| ||||||||||||||| | | || ||||||||||| || ||||| ||||| Sbjct: 10916 acacatctgagtgctggagatcttcttagagctgagattaaatcaggttctgaaaatgg 10974
>gb|AF086603.1|AF086603 Ceratopteris richardii adenylate kinase (ADK1) mRNA, complete cds Length = 1104 Score = 60.0 bits (30), Expect = 8e-06 Identities = 93/114 (81%) Strand = Plus / Plus Query: 221 agtagtatttgttcttggtggtcctggaagtggaaagggcacacagtgtgccaacattgt 280 |||||| ||||||||||| || ||||| ||||| |||||||| |||||||| ||||| Sbjct: 259 agtagtttttgttcttgggggacctggcagtggtaagggcacccagtgtgcatctattgt 318 Query: 281 ggaacactttggattcacccatcttagtgctggagatcttttgcgcgcggagat 334 ||| || |||| ||| || ||||| ||||| || || |||||||| || ||||| Sbjct: 319 ggagcaatttgcatttacacatctgagtgcaggggaccttttgcgtgctgagat 372 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 474 ccaaggaatgaagagaatcgtgc 496 ||||||||||||||||||||||| Sbjct: 512 ccaaggaatgaagagaatcgtgc 534
>ref|NM_180395.1| Arabidopsis thaliana ATP binding / nucleotide kinase/ phosphotransferase, phosphate group as acceptor / uridylate kinase AT3G60180 transcript variant AT3G60180.2 mRNA, complete cds Length = 696 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 237 ggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattc 296 |||||||||||||||||||| || || |||||||| || ||||| | |||||| | | Sbjct: 122 ggtggtcctggaagtggaaaaggtactcagtgtgctaatgttgtgaagcactttagctat 181 Query: 297 acccatcttagtgctggagatctt 320 |||||| |||||||||| |||||| Sbjct: 182 acccattttagtgctggtgatctt 205
>ref|NM_115881.2| Arabidopsis thaliana ATP binding / nucleotide kinase/ phosphotransferase, phosphate group as acceptor / uridylate kinase AT3G60180 transcript variant AT3G60180.1 mRNA, complete cds Length = 844 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 237 ggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattc 296 |||||||||||||||||||| || || |||||||| || ||||| | |||||| | | Sbjct: 122 ggtggtcctggaagtggaaaaggtactcagtgtgctaatgttgtgaagcactttagctat 181 Query: 297 acccatcttagtgctggagatctt 320 |||||| |||||||||| |||||| Sbjct: 182 acccattttagtgctggtgatctt 205
>emb|AL163852.1|ATF27H5 Arabidopsis thaliana DNA chromosome 3, BAC clone F27H5 Length = 88548 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 237 ggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattc 296 |||||||||||||||||||| || || |||||||| || ||||| | |||||| | | Sbjct: 18757 ggtggtcctggaagtggaaaaggtactcagtgtgctaatgttgtgaagcactttagctat 18698 Query: 297 acccatcttagtgctggagatctt 320 |||||| |||||||||| |||||| Sbjct: 18697 acccattttagtgctggtgatctt 18674
>emb|AL138658.1|ATT2O9 Arabidopsis thaliana DNA chromosome 3, BAC clone T2O9 Length = 90823 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 237 ggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattc 296 |||||||||||||||||||| || || |||||||| || ||||| | |||||| | | Sbjct: 81194 ggtggtcctggaagtggaaaaggtactcagtgtgctaatgttgtgaagcactttagctat 81135 Query: 297 acccatcttagtgctggagatctt 320 |||||| |||||||||| |||||| Sbjct: 81134 acccattttagtgctggtgatctt 81111
>gb|AY114727.1| Arabidopsis thaliana uridylate kinase-like protein (At3g60180) mRNA, complete cds Length = 655 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 237 ggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattc 296 |||||||||||||||||||| || || |||||||| || ||||| | |||||| | | Sbjct: 82 ggtggtcctggaagtggaaaaggtactcagtgtgctaatgttgtgaagcactttagctat 141 Query: 297 acccatcttagtgctggagatctt 320 |||||| |||||||||| |||||| Sbjct: 142 acccattttagtgctggtgatctt 165
>gb|AY072358.1| Arabidopsis thaliana uridylate kinase-like protein (At3g60180) mRNA, complete cds Length = 843 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 237 ggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattc 296 |||||||||||||||||||| || || |||||||| || ||||| | |||||| | | Sbjct: 121 ggtggtcctggaagtggaaaaggtactcagtgtgctaatgttgtgaagcactttagctat 180 Query: 297 acccatcttagtgctggagatctt 320 |||||| |||||||||| |||||| Sbjct: 181 acccattttagtgctggtgatctt 204
>gb|AY085667.1| Arabidopsis thaliana clone 16800 mRNA, complete sequence Length = 828 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 237 ggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattc 296 |||||||||||||||||||| || || |||||||| || ||||| | |||||| | | Sbjct: 122 ggtggtcctggaagtggaaaaggtactcagtgtgctaatgttgtgaagcactttagctat 181 Query: 297 acccatcttagtgctggagatctt 320 |||||| |||||||||| |||||| Sbjct: 182 acccattttagtgctggtgatctt 205
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 191 tgagaacatgttgggtgacaagaaagt 217 ||||||||||||||||| ||||||||| Sbjct: 5233337 tgagaacatgttgggtggcaagaaagt 5233363 Score = 42.1 bits (21), Expect = 2.0 Identities = 63/77 (81%) Strand = Plus / Plus Query: 237 ggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattc 296 |||||||||||||||||||| || || ||||| ||| ||||| || || ||||| || Sbjct: 5233542 ggtggtcctggaagtggaaaaggaactcagtgcagcaatattgtagagcattttggtttt 5233601 Query: 297 acccatcttagtgctgg 313 | ||||||||| ||||| Sbjct: 5233602 atccatcttagcgctgg 5233618
>dbj|AP004991.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0016O19 Length = 169120 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 191 tgagaacatgttgggtgacaagaaagt 217 ||||||||||||||||| ||||||||| Sbjct: 100059 tgagaacatgttgggtggcaagaaagt 100085 Score = 42.1 bits (21), Expect = 2.0 Identities = 63/77 (81%) Strand = Plus / Plus Query: 237 ggtggtcctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattc 296 |||||||||||||||||||| || || ||||| ||| ||||| || || ||||| || Sbjct: 100264 ggtggtcctggaagtggaaaaggaactcagtgcagcaatattgtagagcattttggtttt 100323 Query: 297 acccatcttagtgctgg 313 | ||||||||| ||||| Sbjct: 100324 atccatcttagcgctgg 100340
>ref|XM_811305.1| Trypanosoma cruzi strain CL Brener RuvB-like DNA helicase (Tc00.1047053510877.60) partial mRNA Length = 1425 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 372 atgataaaggagggaaagattg 393 |||||||||||||||||||||| Sbjct: 178 atgataaaggagggaaagattg 199
>dbj|AB224027.1| Aspergillus oryzae cDNA, contig sequence: AoEST0868 Length = 617 Score = 44.1 bits (22), Expect = 0.50 Identities = 40/46 (86%) Strand = Plus / Plus Query: 214 aagtcacagtagtatttgttcttggtggtcctggaagtggaaaggg 259 |||||||||| || || ||||||||||||| |||||||| ||||| Sbjct: 380 aagtcacagttgttttccttcttggtggtcccggaagtggcaaggg 425
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 Length = 2324132 Score = 44.1 bits (22), Expect = 0.50 Identities = 40/46 (86%) Strand = Plus / Plus Query: 214 aagtcacagtagtatttgttcttggtggtcctggaagtggaaaggg 259 |||||||||| || || ||||||||||||| |||||||| ||||| Sbjct: 2225345 aagtcacagttgttttccttcttggtggtcccggaagtggcaaggg 2225390
>ref|XM_845499.1| PREDICTED: Canis familiaris similar to gene model 631, (NCBI) (predicted) (LOC608471), mRNA Length = 1726 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 367 agaacatgataaaggagggaa 387 ||||||||||||||||||||| Sbjct: 1692 agaacatgataaaggagggaa 1672
>gb|AC133139.23| Medicago truncatula clone mth1-8d23, complete sequence Length = 121016 Score = 42.1 bits (21), Expect = 2.0 Identities = 66/81 (81%) Strand = Plus / Minus Query: 243 cctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattcacccat 302 ||||| |||||||| || ||||| ||||| | ||||| ||| |||||||| | ||| Sbjct: 16813 cctggtagtggaaaaggtacacaatgtgcaagaattgttgaaacatttggatttaagcat 16754 Query: 303 cttagtgctggagatcttttg 323 || |||||||||||||||||| Sbjct: 16753 ctgagtgctggagatcttttg 16733
>gb|AC122727.24| Medicago truncatula clone mth2-13b8, complete sequence Length = 128564 Score = 42.1 bits (21), Expect = 2.0 Identities = 66/81 (81%) Strand = Plus / Plus Query: 243 cctggaagtggaaagggcacacagtgtgccaacattgtggaacactttggattcacccat 302 ||||| |||||||| || ||||| ||||| | ||||| ||| |||||||| | ||| Sbjct: 111752 cctggtagtggaaaaggtacacaatgtgcaagaattgttgaaacatttggatttaagcat 111811 Query: 303 cttagtgctggagatcttttg 323 || |||||||||||||||||| Sbjct: 111812 ctgagtgctggagatcttttg 111832
>ref|XM_788037.1| PREDICTED: Strongylocentrotus purpuratus similar to adenylate kinase 5 isoform 1 (LOC588348), mRNA Length = 2571 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 243 cctggaagtggaaagggcacacagtgtgc 271 ||||| |||||||||||||| |||||||| Sbjct: 382 cctggcagtggaaagggcacgcagtgtgc 410
>ref|XM_967357.1| PREDICTED: Tribolium castaneum similar to CG8714-PA (LOC661178), mRNA Length = 1533 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 168 gtgactgagaaggaggtggtt 188 ||||||||||||||||||||| Sbjct: 1510 gtgactgagaaggaggtggtt 1530
>gb|DQ118863.1| Streptomyces fradiae strain NRRL18158 lipopeptide antibiotic A54145 biosynthetic gene cluster, complete sequence Length = 126933 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 36 accacgcgccctcccgccccgtgatcgccgccg 68 |||| ||||||| ||||| |||||||||||||| Sbjct: 16392 accaggcgcccttccgccgcgtgatcgccgccg 16424
>emb|CR759739.2| Human DNA sequence from clone XX-NCIH2171_18I22, complete sequence Length = 252905 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 229 ttgttcttggtggtcctggaa 249 ||||||||||||||||||||| Sbjct: 1508 ttgttcttggtggtcctggaa 1488
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 accaccaccgcagcacgcacc 38 ||||||||||||||||||||| Sbjct: 437499 accaccaccgcagcacgcacc 437479
>gb|AF503335.1| Mus musculus strain 129/Sv gamma casein gene, complete cds Length = 30958 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 361 tgattgagaacatgataaagg 381 ||||||||||||||||||||| Sbjct: 13298 tgattgagaacatgataaagg 13278
>gb|AC006576.15| Homo sapiens Chromosome 12p13.3 BAC Clone 762c12, complete sequence Length = 116840 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 229 ttgttcttggtggtcctggaa 249 ||||||||||||||||||||| Sbjct: 99121 ttgttcttggtggtcctggaa 99101
>gb|AC074046.9|AC074046 Mus musculus 5 BAC RP23-440C1 (Roswell Park Cancer Institute Mouse BAC Library) complete sequence Length = 182534 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 tgattgagaacatgataaagg 381 ||||||||||||||||||||| Sbjct: 71548 tgattgagaacatgataaagg 71568
>gb|AC005846.1| Homo sapiens 12 PAC RPCI3-467F14 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 111904 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 ttgttcttggtggtcctggaa 249 ||||||||||||||||||||| Sbjct: 58161 ttgttcttggtggtcctggaa 58181
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 18 accaccaccgcagcacgcacc 38 ||||||||||||||||||||| Sbjct: 449577 accaccaccgcagcacgcacc 449557
>gb|AC165433.5| Mus musculus chromosome 5, clone RP23-442L7, complete sequence Length = 202557 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 gagaaggaggtggttgctga 193 |||||||||||||||||||| Sbjct: 162240 gagaaggaggtggttgctga 162221
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ccgccccgtgatcgccgccg 68 |||||||||||||||||||| Sbjct: 885109 ccgccccgtgatcgccgccg 885090 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 gatcgccgccgtctcgccgc 77 |||||||||||||||||||| Sbjct: 843407 gatcgccgccgtctcgccgc 843388
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 ccgccccgtgatcgccgccg 68 |||||||||||||||||||| Sbjct: 1901761 ccgccccgtgatcgccgccg 1901742 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 gatcgccgccgtctcgccgc 77 |||||||||||||||||||| Sbjct: 1859860 gatcgccgccgtctcgccgc 1859841
>gb|AF165424.6| Homo sapiens chromosome 8 clone CTB-402F2 map q21.3, complete sequence Length = 111736 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 agccatgataaagaatgaga 447 |||||||||||||||||||| Sbjct: 24137 agccatgataaagaatgaga 24118
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cgcagcacgcaccacgcgcc 45 |||||||||||||||||||| Sbjct: 11915861 cgcagcacgcaccacgcgcc 11915842
>gb|AC127240.3| Mus musculus BAC clone RP24-387H11 from chromosome 8, complete sequence Length = 212579 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 gcagctgtgactgagaagga 181 |||||||||||||||||||| Sbjct: 59511 gcagctgtgactgagaagga 59530
>gb|AC016946.15| Homo sapiens 3 BAC RP11-268F24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161123 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 tggaacactttggattcacc 299 |||||||||||||||||||| Sbjct: 137460 tggaacactttggattcacc 137479
>ref|XM_802677.1| Trypanosoma cruzi strain CL Brener serine/threonine protein kinase (Tc00.1047053508675.9) partial mRNA Length = 558 Score = 40.1 bits (20), Expect = 7.9 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 5 accaacaccacagaccaccaccgcagca 32 |||||||||||| ||||||||||||||| Sbjct: 106 accaacaccaca-accaccaccgcagca 132
>gb|AC122438.2| Mus musculus BAC clone RP24-216M6 from 5, complete sequence Length = 193659 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 gagaaggaggtggttgctga 193 |||||||||||||||||||| Sbjct: 108421 gagaaggaggtggttgctga 108440
>ref|XM_760066.1| Theileria parva strain Muguga hypothetical protein (TP02_0593) partial mRNA Length = 3249 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 220 cagtagtatttgttcttggtggtc 243 |||| ||||||||||||||||||| Sbjct: 124 cagtggtatttgttcttggtggtc 147
>emb|AL359816.16| Human DNA sequence from clone RP11-37P5 on chromosome 10 Contains a ferritin light polypeptide (FTL) pseudogene, complete sequence Length = 102101 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 agccatgataaagaatgaga 447 |||||||||||||||||||| Sbjct: 56482 agccatgataaagaatgaga 56501
>gb|AC115283.3| Homo sapiens chromosome 3 clone RP11-632K8, complete sequence Length = 193486 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 attaaatctggctctgagaa 352 |||||||||||||||||||| Sbjct: 123270 attaaatctggctctgagaa 123251
>emb|AL136531.16| Human DNA sequence from clone RP11-314N13 on chromosome 20 Contains the SNPH gene for syntaphilin, the 3' end of the RAD21L1 gene for RAD21-like 1 (S. pombe), the SDCBP2 gene for syndecan binding protein (syntenin) 2, a novel gene, the 5' end of a novel gene, the 3' end of the FKBP1A gene for FK506 binding protein 1A (12kDa) and three CpG islands, complete sequence Length = 119072 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 558 gaagagatggaaagacgtct 577 |||||||||||||||||||| Sbjct: 75989 gaagagatggaaagacgtct 76008
>emb|AL023553.5|HS347H13 Human DNA sequence from clone RP3-347H13 on chromosome 22 Contains the 3' end of the ACO2 gene for mitochondrial aconitase 2, the gene for a novel protein similar to yeast DNA-directed RNA Polymerase III 25 kD Polypeptide, the gene for the human ortholog of rat Pippin, the PMM1 gene for phosphomannomutase 1 (PMMH-22, yeast SEC53 ortholog), and two novel genes. Contains ESTs, STSs, GSSs and two putative CpG islands, complete sequence Length = 107818 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 427 aagccatgataaagaatgagaatg 450 ||||||||| |||||||||||||| Sbjct: 53757 aagccatgaaaaagaatgagaatg 53780
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 gatcgccgccgtctcgccgc 77 |||||||||||||||||||| Sbjct: 2505042 gatcgccgccgtctcgccgc 2505061 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 ccgccccgtgatcgccgccg 68 |||||||||||||||||||| Sbjct: 2463144 ccgccccgtgatcgccgccg 2463163
>emb|AL833433.1|HSM804746 Homo sapiens genomic DNA; cDNA DKFZp313O2039 (from clone DKFZp313O2039) Length = 2086 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 558 gaagagatggaaagacgtct 577 |||||||||||||||||||| Sbjct: 204 gaagagatggaaagacgtct 185
>gb|DQ068068.1| Uncultured bacterium BAC17H8, complete sequence Length = 135294 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gtgatcgccgccgtctcgcc 75 |||||||||||||||||||| Sbjct: 8658 gtgatcgccgccgtctcgcc 8677
>gb|AC084128.6| Homo sapiens chromosome 8, clone CTD-3118D11, complete sequence Length = 129240 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 agccatgataaagaatgaga 447 |||||||||||||||||||| Sbjct: 116458 agccatgataaagaatgaga 116439
>gb|AC103760.2| Homo sapiens chromosome 8, clone CTD-2284J15, complete sequence Length = 112655 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 428 agccatgataaagaatgaga 447 |||||||||||||||||||| Sbjct: 99088 agccatgataaagaatgaga 99107
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 114 cagcccgtccggcggcgcggagcc 137 ||||||||| |||||||||||||| Sbjct: 4483463 cagcccgtcaggcggcgcggagcc 4483440
>gb|AC137589.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0072L08, complete sequence Length = 152272 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 ccgtgatcgccgccgtctcgccgc 77 |||||| ||||||||||||||||| Sbjct: 117478 ccgtgaccgccgccgtctcgccgc 117501
>gb|AC144558.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0072L08, sequencing in progress, complete sequence Length = 152272 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 ccgtgatcgccgccgtctcgccgc 77 |||||| ||||||||||||||||| Sbjct: 117478 ccgtgaccgccgccgtctcgccgc 117501
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 ccgtgatcgccgccgtctcgccgc 77 |||||| ||||||||||||||||| Sbjct: 21115163 ccgtgaccgccgccgtctcgccgc 21115186
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cgcagcacgcaccacgcgcc 45 |||||||||||||||||||| Sbjct: 11912624 cgcagcacgcaccacgcgcc 11912605
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 tatgattgagaacatgataa 378 |||||||||||||||||||| Sbjct: 19269361 tatgattgagaacatgataa 19269342
>gb|AC068724.7|AC068724 Homo sapiens chromosome 15 clone RP11-473C18 map 15q15, complete sequence Length = 190727 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 11 accacagaccaccaccgcagcacg 34 |||||||||||||||| ||||||| Sbjct: 73942 accacagaccaccaccacagcacg 73919
>dbj|AB029073.2| Mus musculus Kkm gene for Ser/Thr kinase KKIAMRE, complete cds Length = 30852 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 gagaaggaggtggttgctga 193 |||||||||||||||||||| Sbjct: 10938 gagaaggaggtggttgctga 10957
>dbj|AP003447.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1619_F12 Length = 133028 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 tatgattgagaacatgataa 378 |||||||||||||||||||| Sbjct: 88982 tatgattgagaacatgataa 88963
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 cgccgacccctccaccggca 99 |||||||||||||||||||| Sbjct: 757144 cgccgacccctccaccggca 757163
>gb|AC005040.2|AC005040 Homo sapiens BAC clone RP11-519H15 from 2, complete sequence Length = 189949 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 tttccaaggaatgaagagaa 490 |||||||||||||||||||| Sbjct: 160684 tttccaaggaatgaagagaa 160665
>gb|AC006499.13|AC006499 Homo sapiens chromosome 4 clone C0494H11, complete sequence Length = 195384 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 tagtatttgttcttggtggt 242 |||||||||||||||||||| Sbjct: 137608 tagtatttgttcttggtggt 137627
>gb|AC155176.6| Mus musculus 10 BAC RP24-219F17 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 186725 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 aaagaatgagaatgataagt 456 |||||||||||||||||||| Sbjct: 7141 aaagaatgagaatgataagt 7122
>gb|AC005922.1|AC005922 Homo sapiens chromosome 17, clone hRPK.235_I_10, complete sequence Length = 140677 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 agtcacagtagtatttgttc 234 |||||||||||||||||||| Sbjct: 3948 agtcacagtagtatttgttc 3967
>gb|AC153830.5| Mus musculus 10 BAC RP23-299H19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 200647 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 aaagaatgagaatgataagt 456 |||||||||||||||||||| Sbjct: 170340 aaagaatgagaatgataagt 170321
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 54 ccgtgatcgccgccgtctcgccgc 77 |||||| ||||||||||||||||| Sbjct: 21425404 ccgtgaccgccgccgtctcgccgc 21425427
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 gtctcgccgctgcgccgacccctc 91 ||||||||||||||||| |||||| Sbjct: 2708558 gtctcgccgctgcgccggcccctc 2708581
>gb|AC126222.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0014I10, complete sequence Length = 113946 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 cgcagcacgcaccacgcgcc 45 |||||||||||||||||||| Sbjct: 17123 cgcagcacgcaccacgcgcc 17104 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,287,088 Number of Sequences: 3902068 Number of extensions: 5287088 Number of successful extensions: 110835 Number of sequences better than 10.0: 100 Number of HSP's better than 10.0 without gapping: 99 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 109890 Number of HSP's gapped (non-prelim): 945 length of query: 578 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 555 effective length of database: 17,143,297,704 effective search space: 9514530225720 effective search space used: 9514530225720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
