ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart55e01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HMT2_MAIZE (Q9FUM9) Homocysteine S-methyltransferase 2 (EC 2.1.1... 219 4e-57
2HMT3_MAIZE (Q9FUM8) Homocysteine S-methyltransferase 3 (EC 2.1.1... 217 1e-56
3HMT2_ARATH (Q9M1W4) Homocysteine S-methyltransferase 2 (EC 2.1.1... 181 1e-45
4HMT3_ARATH (Q8LAX0) Homocysteine S-methyltransferase 3 (EC 2.1.1... 179 4e-45
5SMTA_ASTBI (P56707) Selenocysteine methyltransferase (EC 2.1.1.-... 179 6e-45
6HMT4_MAIZE (Q9FUM7) Homocysteine S-methyltransferase 4 (EC 2.1.1... 173 2e-43
7HMT1_MAIZE (Q9FUN0) Homocysteine S-methyltransferase 1 (EC 2.1.1... 154 2e-37
8HMT1_ARATH (Q9SDL7) Homocysteine S-methyltransferase 1 (EC 2.1.1... 149 4e-36
9MMUM_ECOLI (Q47690) Homocysteine S-methyltransferase (EC 2.1.1.1... 142 6e-34
10MHT1_YEAST (Q12525) Homocysteine S-methyltransferase 1 (EC 2.1.1... 54 3e-07
11SAM4_YEAST (Q08985) Homocysteine S-methyltransferase 2 (EC 2.1.1... 46 7e-05
12METH_VIBPA (Q87L95) Methionine synthase (EC 2.1.1.13) (5-methylt... 44 4e-04
13METH_VIBFI (Q9AJQ8) Methionine synthase (EC 2.1.1.13) (5-methylt... 41 0.002
14METH_VIBF1 (Q5E814) Methionine synthase (EC 2.1.1.13) (5-methylt... 41 0.002
15METH_VIBVY (Q7MHB1) Methionine synthase (EC 2.1.1.13) (5-methylt... 40 0.004
16METH_VIBVU (Q8DCJ7) Methionine synthase (EC 2.1.1.13) (5-methylt... 40 0.004
17METH_VIBCH (Q9KUW9) Methionine synthase (EC 2.1.1.13) (5-methylt... 38 0.020
18METH_SALTY (P37586) Methionine synthase (EC 2.1.1.13) (5-methylt... 36 0.075
19METH_ECOLI (P13009) Methionine synthase (EC 2.1.1.13) (5-methylt... 36 0.075
20METH_PSEPU (O33465) Methionine synthase (EC 2.1.1.13) (5-methylt... 35 0.098
21METH_HUMAN (Q99707) Methionine synthase (EC 2.1.1.13) (5-methylt... 35 0.17
22MT57_ECOLI (P25240) Modification methylase Eco57IB (EC 2.1.1.72)... 33 0.64
23METH_MYCTU (O33259) Methionine synthase (EC 2.1.1.13) (5-methylt... 31 1.9
24MURB_SHEON (Q8EK85) UDP-N-acetylenolpyruvoylglucosamine reductas... 31 1.9
25METH_CAEEL (Q09582) Probable methionine synthase (EC 2.1.1.13) (... 30 3.2
26CPXM_HUMAN (Q96SM3) Probable carboxypeptidase X precursor (EC 3.... 29 9.2
27YCF1_EPIVI (Q00383) Hypothetical 208 kDa protein ycf1 (ORF 1738) 29 9.2
28BKRB2_RAT (P25023) B2 bradykinin receptor (BK-2 receptor) (B2R) 29 9.2

>HMT2_MAIZE (Q9FUM9) Homocysteine S-methyltransferase 2 (EC 2.1.1.10)|
           (S-methylmethionine:homocysteine methyltransferase 2)
           (SMM:Hcy S-methyltransferase 2) (ZmHMT-2)
          Length = 339

 Score =  219 bits (558), Expect = 4e-57
 Identities = 110/126 (87%), Positives = 121/126 (96%), Gaps = 1/126 (0%)
 Frame = +1

Query: 154 LVLDGGLATELEAHGADLNDPLWSAKCILSSPHLIRKVHLDYIEAGANIIITASYQATIQ 333
           LVLDGGLATELEA+GADLNDPLWSAKC+LSSPHLIRKVH+DY+EAGANIIITASYQATIQ
Sbjct: 24  LVLDGGLATELEANGADLNDPLWSAKCLLSSPHLIRKVHMDYLEAGANIIITASYQATIQ 83

Query: 334 GFEAKGFSKEQGENLLTKSVEIAHEAREMFLKEHPDQSTALR-PILVAASIGSYGAYLAD 510
           GFE+KGFSKEQ ENLLTKSVEIA EAREMFLKEH ++ST ++ P+LVAAS+GSYGAYLAD
Sbjct: 84  GFESKGFSKEQSENLLTKSVEIALEAREMFLKEHLEKSTPIQHPVLVAASLGSYGAYLAD 143

Query: 511 GSEYSG 528
           GSEYSG
Sbjct: 144 GSEYSG 149



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>HMT3_MAIZE (Q9FUM8) Homocysteine S-methyltransferase 3 (EC 2.1.1.10)|
           (S-methylmethionine:homocysteine methyltransferase 3)
           (SMM:Hcy S-methyltransferase 3) (ZmHMT-3)
          Length = 338

 Score =  217 bits (553), Expect = 1e-56
 Identities = 109/126 (86%), Positives = 121/126 (96%), Gaps = 1/126 (0%)
 Frame = +1

Query: 154 LVLDGGLATELEAHGADLNDPLWSAKCILSSPHLIRKVHLDYIEAGANIIITASYQATIQ 333
           LVLDGGLATELEA+GADLNDPLWSAKC+LSSPHLIRKVH+DY+EAGANIIITASYQATIQ
Sbjct: 24  LVLDGGLATELEANGADLNDPLWSAKCLLSSPHLIRKVHMDYLEAGANIIITASYQATIQ 83

Query: 334 GFEAKGFSKEQGENLLTKSVEIAHEAREMFLKEHPDQSTALR-PILVAASIGSYGAYLAD 510
           GFE+KGFSKEQ ENLLTKSV+IA EAREMFLKEH ++ST ++ PILVAA++GSYGAYLAD
Sbjct: 84  GFESKGFSKEQSENLLTKSVQIALEAREMFLKEHLEKSTPIQHPILVAAALGSYGAYLAD 143

Query: 511 GSEYSG 528
           GSEYSG
Sbjct: 144 GSEYSG 149



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>HMT2_ARATH (Q9M1W4) Homocysteine S-methyltransferase 2 (EC 2.1.1.10)|
           (S-methylmethionine:homocysteine methyltransferase 2)
           (SMM:Hcy S-methyltransferase 2) (AtHMT-2)
          Length = 333

 Score =  181 bits (459), Expect = 1e-45
 Identities = 92/130 (70%), Positives = 105/130 (80%), Gaps = 6/130 (4%)
 Frame = +1

Query: 157 VLDGGLATELEAHGADLNDPLWSAKCILSSPHLIRKVHLDYIEAGANIIITASYQATIQG 336
           V+DGGLATE E HGADLNDPLWSAKC+++SPHLI  VHLDY+EAGA+II +ASYQATIQG
Sbjct: 21  VIDGGLATEFERHGADLNDPLWSAKCLVTSPHLIHTVHLDYLEAGADIISSASYQATIQG 80

Query: 337 FEAKGFSKEQGENLLTKSVEIAHEAREMFL------KEHPDQSTALRPILVAASIGSYGA 498
           FEAKGFS+E+ E+LL KSVEIA EAR  +           D+    RPILVAAS+GSYGA
Sbjct: 81  FEAKGFSREESESLLKKSVEIATEARNSYYDKCGTSSSMDDKILKKRPILVAASVGSYGA 140

Query: 499 YLADGSEYSG 528
           YLADGSEYSG
Sbjct: 141 YLADGSEYSG 150



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>HMT3_ARATH (Q8LAX0) Homocysteine S-methyltransferase 3 (EC 2.1.1.10)|
           (S-methylmethionine:homocysteine methyltransferase 3)
           (SMM:Hcy S-methyltransferase 3) (AtHMT-3)
          Length = 347

 Score =  179 bits (454), Expect = 4e-45
 Identities = 90/132 (68%), Positives = 105/132 (79%), Gaps = 8/132 (6%)
 Frame = +1

Query: 157 VLDGGLATELEAHGADLNDPLWSAKCILSSPHLIRKVHLDYIEAGANIIITASYQATIQG 336
           V+DGG ATEL+ HGAD+NDPLWSAKC+++SPHL+ KVHLDY+E+GANIIITASYQATIQG
Sbjct: 25  VVDGGFATELQRHGADINDPLWSAKCLITSPHLVTKVHLDYLESGANIIITASYQATIQG 84

Query: 337 FEAKGFSKEQGENLLTKSVEIAHEAREMFLKEHPDQS--------TALRPILVAASIGSY 492
           F AKG S  + ENLL +SVEI +EARE+F       S         + RPILVAAS+GSY
Sbjct: 85  FVAKGLSVGEAENLLRRSVEITYEAREIFYNRCTKGSWDFAYAGKASRRPILVAASVGSY 144

Query: 493 GAYLADGSEYSG 528
           GAYLADGSEYSG
Sbjct: 145 GAYLADGSEYSG 156



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>SMTA_ASTBI (P56707) Selenocysteine methyltransferase (EC 2.1.1.-)|
           (SECYS-methyltransferase) (SECYS-MT)
          Length = 338

 Score =  179 bits (453), Expect = 6e-45
 Identities = 91/133 (68%), Positives = 109/133 (81%), Gaps = 9/133 (6%)
 Frame = +1

Query: 157 VLDGGLATELEAHGADLNDPLWSAKCILSSPHLIRKVHLDYIEAGANIIITASYQATIQG 336
           V+ GGL TEL+ HGADLNDPLWSAKC+LS PHLIR+VHLDY+E GA+IIITASYQATIQG
Sbjct: 18  VIAGGLGTELQRHGADLNDPLWSAKCLLSCPHLIRQVHLDYLENGADIIITASYQATIQG 77

Query: 337 FEAKGFSKEQGENLLTKSVEIAHEAREMFLK-------EHPDQSTAL--RPILVAASIGS 489
           F+AKGFS E+GE LL +SVEIA EAR+++ +       ++ D S  L  RPIL+A S+GS
Sbjct: 78  FKAKGFSDEEGEALLRRSVEIAREARDLYYQRCAESSSDNGDDSRILKQRPILIAGSVGS 137

Query: 490 YGAYLADGSEYSG 528
           YGAYLADGSE+SG
Sbjct: 138 YGAYLADGSEFSG 150



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>HMT4_MAIZE (Q9FUM7) Homocysteine S-methyltransferase 4 (EC 2.1.1.10)|
           (S-methylmethionine:homocysteine methyltransferase 4)
           (SMM:Hcy S-methyltransferase 4) (ZmHMT-4)
          Length = 342

 Score =  173 bits (439), Expect = 2e-43
 Identities = 85/125 (68%), Positives = 104/125 (83%), Gaps = 1/125 (0%)
 Frame = +1

Query: 157 VLDGGLATELEAHGADLNDPLWSAKCILSSPHLIRKVHLDYIEAGANIIITASYQATIQG 336
           V+DGGL TELEAHGADL+D LWSAKC+ S+PHLIRKVHLDY+EAGA++II+ASYQATI+G
Sbjct: 26  VVDGGLGTELEAHGADLHDALWSAKCLASAPHLIRKVHLDYLEAGADVIISASYQATIEG 85

Query: 337 FEAKGFSKEQGENLLTKSVEIAHEAREMFLKEHPDQSTALR-PILVAASIGSYGAYLADG 513
           F+++GFS+++ E LL +SV +A EAR +F  E    S   R P LVAAS+GSYGAY ADG
Sbjct: 86  FQSRGFSRDESEELLRRSVHVAQEARRVFAAEGDRSSRRGRPPALVAASVGSYGAYRADG 145

Query: 514 SEYSG 528
           SEYSG
Sbjct: 146 SEYSG 150



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>HMT1_MAIZE (Q9FUN0) Homocysteine S-methyltransferase 1 (EC 2.1.1.10)|
           (S-methylmethionine:homocysteine methyltransferase 1)
           (SMM:Hcy S-methyltransferase 1) (ZmHMT-1)
          Length = 323

 Score =  154 bits (388), Expect = 2e-37
 Identities = 76/125 (60%), Positives = 100/125 (80%), Gaps = 1/125 (0%)
 Frame = +1

Query: 157 VLDGGLATELEAHGADLNDPLWSAKCILSSPHLIRKVHLDYIEAGANIIITASYQATIQG 336
           V+DGG AT+LEA GAD+NDPLWSA C+++ PHL+++VH+ Y+EAGA++II++SYQATI G
Sbjct: 16  VIDGGFATQLEALGADINDPLWSAACLITRPHLVKEVHMQYLEAGADVIISSSYQATIPG 75

Query: 337 FEAKGFSKEQGENLLTKSVEIAHEAREMFLKEHPDQSTAL-RPILVAASIGSYGAYLADG 513
           F A+G S  + E+LL  SV++A+EAR+ F K    +S  +    LVAASIGSYGAYLADG
Sbjct: 76  FIARGMSVAEAEDLLRTSVKLANEARDEFWKSTLRKSKPIYNRALVAASIGSYGAYLADG 135

Query: 514 SEYSG 528
           SEYSG
Sbjct: 136 SEYSG 140



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>HMT1_ARATH (Q9SDL7) Homocysteine S-methyltransferase 1 (EC 2.1.1.10)|
           (S-methylmethionine:homocysteine methyltransferase 1)
           (SMM:Hcy S-methyltransferase 1) (AtHMT-1)
          Length = 326

 Score =  149 bits (377), Expect = 4e-36
 Identities = 75/125 (60%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
 Frame = +1

Query: 157 VLDGGLATELEAHGADLNDPLWSAKCILSSPHLIRKVHLDYIEAGANIIITASYQATIQG 336
           V+DGG AT+LE HGA +NDPLWSA  ++ +P LI++VH++Y+EAGA+I++T+SYQATI G
Sbjct: 22  VVDGGFATQLEIHGAAINDPLWSAVSLIKNPELIKRVHMEYLEAGADIVVTSSYQATIPG 81

Query: 337 FEAKGFSKEQGENLLTKSVEIAHEAREMFLKEHPDQS-TALRPILVAASIGSYGAYLADG 513
           F ++G S E+ E+LL KSVE+A EAR+ F ++    S  +    LVAASIGSYGAYLADG
Sbjct: 82  FLSRGLSIEESESLLQKSVELAVEARDRFWEKVSKVSGHSYNRALVAASIGSYGAYLADG 141

Query: 514 SEYSG 528
           SEYSG
Sbjct: 142 SEYSG 146



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>MMUM_ECOLI (Q47690) Homocysteine S-methyltransferase (EC 2.1.1.10)|
           (S-methylmethionine:homocysteine methyltransferase)
          Length = 310

 Score =  142 bits (358), Expect = 6e-34
 Identities = 73/125 (58%), Positives = 90/125 (72%)
 Frame = +1

Query: 154 LVLDGGLATELEAHGADLNDPLWSAKCILSSPHLIRKVHLDYIEAGANIIITASYQATIQ 333
           L+LDG +ATELEA G +L D LWSAK ++ +P LIR+VHLDY  AGA   ITASYQAT  
Sbjct: 17  LLLDGAMATELEARGCNLADSLWSAKVLVENPELIREVHLDYYRAGAQCAITASYQATPA 76

Query: 334 GFEAKGFSKEQGENLLTKSVEIAHEAREMFLKEHPDQSTALRPILVAASIGSYGAYLADG 513
           GF A+G  + Q + L+ KSVE+A +ARE +L E+P   T    +LVA S+G YGAYLADG
Sbjct: 77  GFAARGLDEAQSKALIGKSVELARKAREAYLAENPQAGT----LLVAGSVGPYGAYLADG 132

Query: 514 SEYSG 528
           SEY G
Sbjct: 133 SEYRG 137



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>MHT1_YEAST (Q12525) Homocysteine S-methyltransferase 1 (EC 2.1.1.10)|
           (S-methylmethionine:homocysteine methyltransferase 1)
           (SMM:Hcy S-methyltransferase 1)
          Length = 324

 Score = 53.9 bits (128), Expect = 3e-07
 Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 9/69 (13%)
 Frame = +1

Query: 154 LVLDGGLATELEAHGADLNDPLWSAKCILSSP---------HLIRKVHLDYIEAGANIII 306
           L+LDGG  TELE  G ++N P+WSA    S            ++ +++ D++ AGANI++
Sbjct: 18  LILDGGQGTELENRGININSPVWSAAPFTSESFWEPSSQERKVVEEMYRDFMIAGANILM 77

Query: 307 TASYQATIQ 333
           T +YQA  Q
Sbjct: 78  TITYQANFQ 86



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>SAM4_YEAST (Q08985) Homocysteine S-methyltransferase 2 (EC 2.1.1.10)|
           (S-methylmethionine:homocysteine methyltransferase 2)
           (SMM:Hcy S-methyltransferase 2) (S-adenosylmethionine
           metabolism protein 4)
          Length = 325

 Score = 45.8 bits (107), Expect = 7e-05
 Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 12/95 (12%)
 Frame = +1

Query: 154 LVLDGGLATELEAHGADLNDPLWSAKCILS----------SPHLIRKVHLDYIEAGANII 303
           LVLDGG  TELE  G  + +P+WS    +S          +  +++++  D++ AGA I+
Sbjct: 18  LVLDGGQGTELENRGIKVANPVWSTIPFISESFWSDESSANRKIVKEMFNDFLNAGAEIL 77

Query: 304 ITASYQATIQGFEAKGFSKEQGE--NLLTKSVEIA 402
           +T +YQ + +        +   E  NLL + V+ +
Sbjct: 78  MTTTYQTSYKSVSENTPIRTLSEYNNLLNRIVDFS 112



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>METH_VIBPA (Q87L95) Methionine synthase (EC 2.1.1.13)|
           (5-methyltetrahydrofolate--homocysteine
           methyltransferase) (Methionine synthase, vitamin-B12
           dependent isozyme) (MS)
          Length = 1226

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 16/127 (12%)
 Frame = +1

Query: 154 LVLDGGLATELEAHGADLND------PLWSAKC-------ILSSPHLIRKVHLDYIEAGA 294
           L++DGG+ T ++ +  +  D        W           +LS P LI+++H  Y+EAGA
Sbjct: 18  LLIDGGMGTMIQGYKLEEQDYRGERFANWHCDLKGNNDLLVLSQPQLIKEIHSAYLEAGA 77

Query: 295 NIIITASYQAT---IQGFEAKGFSKEQGENLLTKSVEIAHEAREMFLKEHPDQSTALRPI 465
           +I+ T ++ AT   +  +E +  S+E    +   + ++A E  + +  + PD     +P 
Sbjct: 78  DILETNTFNATTIAMADYEMESLSEE----INFAAAKLAREVADEWTAKTPD-----KPR 128

Query: 466 LVAASIG 486
            VA  +G
Sbjct: 129 YVAGVLG 135



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>METH_VIBFI (Q9AJQ8) Methionine synthase (EC 2.1.1.13)|
           (5-methyltetrahydrofolate--homocysteine
           methyltransferase) (Methionine synthase, vitamin-B12
           dependent isozyme) (MS)
          Length = 1226

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 31/127 (24%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
 Frame = +1

Query: 154 LVLDGGLATELEAHGADLND------PLWSAKC-------ILSSPHLIRKVHLDYIEAGA 294
           L++DGG+ T ++ +  +  D        W           +LS P +IR +H  Y+EAGA
Sbjct: 19  LLIDGGMGTMIQGYKFEEKDYRGGRFNQWHCDLKGNNDLLVLSQPQIIRDIHEAYLEAGA 78

Query: 295 NIIITASYQAT---IQGFEAKGFSKEQGENLLTKSVEIAHEAREMFLKEHPDQSTALRPI 465
           +I+ T ++ AT   +  ++ +  S+E    +  ++ ++A E  + + ++ P+     +P 
Sbjct: 79  DILETNTFNATTIAMADYDMESLSEE----INFEAAKLAREVADKWTEKTPN-----KPR 129

Query: 466 LVAASIG 486
            VA  +G
Sbjct: 130 YVAGVLG 136



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>METH_VIBF1 (Q5E814) Methionine synthase (EC 2.1.1.13)|
           (5-methyltetrahydrofolate--homocysteine
           methyltransferase) (Methionine synthase, vitamin-B12
           dependent isozyme) (MS)
          Length = 1226

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 31/127 (24%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
 Frame = +1

Query: 154 LVLDGGLATELEAHGADLND------PLWSAKC-------ILSSPHLIRKVHLDYIEAGA 294
           L++DGG+ T ++ +  +  D        W           +LS P +IR +H  Y+EAGA
Sbjct: 19  LLIDGGMGTMIQGYKFEEEDYRGERFNKWHCDLKGNNDLLVLSQPQIIRDIHEAYLEAGA 78

Query: 295 NIIITASYQAT---IQGFEAKGFSKEQGENLLTKSVEIAHEAREMFLKEHPDQSTALRPI 465
           +I+ T ++ AT   +  ++ +  S+E    +  ++ ++A E  + + ++ P+     +P 
Sbjct: 79  DILETNTFNATTIAMADYDMESLSEE----INFEAAKLAREVADKWTEKTPN-----KPR 129

Query: 466 LVAASIG 486
            VA  +G
Sbjct: 130 YVAGVLG 136



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>METH_VIBVY (Q7MHB1) Methionine synthase (EC 2.1.1.13)|
           (5-methyltetrahydrofolate--homocysteine
           methyltransferase) (Methionine synthase, vitamin-B12
           dependent isozyme) (MS)
          Length = 1226

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 31/127 (24%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
 Frame = +1

Query: 154 LVLDGGLATELEAHGADLNDPL------WSAKC-------ILSSPHLIRKVHLDYIEAGA 294
           L++DGG+ T ++ +     D        W +         +L+ P LI+++H  Y+EAGA
Sbjct: 18  LLIDGGMGTMIQGYKLQEQDYRGERFADWHSDLKGNNDLLVLTQPQLIKEIHHAYLEAGA 77

Query: 295 NIIITASYQAT---IQGFEAKGFSKEQGENLLTKSVEIAHEAREMFLKEHPDQSTALRPI 465
           +I+ T ++ AT   +  ++ +  S+E    +   + ++A EA + +  ++P      +P 
Sbjct: 78  DILETNTFNATTIAMADYDMESLSEE----INFAAAKLAREAADEWTAKNP-----AKPR 128

Query: 466 LVAASIG 486
            VA  +G
Sbjct: 129 YVAGVLG 135



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>METH_VIBVU (Q8DCJ7) Methionine synthase (EC 2.1.1.13)|
           (5-methyltetrahydrofolate--homocysteine
           methyltransferase) (Methionine synthase, vitamin-B12
           dependent isozyme) (MS)
          Length = 1226

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 31/127 (24%), Positives = 62/127 (48%), Gaps = 16/127 (12%)
 Frame = +1

Query: 154 LVLDGGLATELEAHGADLNDPL------WSAKC-------ILSSPHLIRKVHLDYIEAGA 294
           L++DGG+ T ++ +     D        W +         +L+ P LI+++H  Y+EAGA
Sbjct: 18  LLIDGGMGTMIQGYKLQEQDYRGERFADWHSDLKGNNDLLVLTQPQLIKEIHHAYLEAGA 77

Query: 295 NIIITASYQAT---IQGFEAKGFSKEQGENLLTKSVEIAHEAREMFLKEHPDQSTALRPI 465
           +I+ T ++ AT   +  ++ +  S+E    +   +  +A EA + +  ++P      +P 
Sbjct: 78  DILETNTFNATTIAMADYDMESLSEE----INFAAARLAREAADEWTAQNP-----AKPR 128

Query: 466 LVAASIG 486
            VA  +G
Sbjct: 129 YVAGVLG 135



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>METH_VIBCH (Q9KUW9) Methionine synthase (EC 2.1.1.13)|
           (5-methyltetrahydrofolate--homocysteine
           methyltransferase) (Methionine synthase, vitamin-B12
           dependent isozyme) (MS)
          Length = 1226

 Score = 37.7 bits (86), Expect = 0.020
 Identities = 31/127 (24%), Positives = 62/127 (48%), Gaps = 16/127 (12%)
 Frame = +1

Query: 154 LVLDGGLATELEAH--------GADLNDPLWSAK-----CILSSPHLIRKVHLDYIEAGA 294
           L++DGG+ T ++++        GA   D     K      +L+ P +I+++H  Y+EAGA
Sbjct: 18  LLIDGGMGTMIQSYKLQEEDYRGARFVDWHCDLKGNNDLLVLTQPQIIKEIHSAYLEAGA 77

Query: 295 NIIITASYQAT---IQGFEAKGFSKEQGENLLTKSVEIAHEAREMFLKEHPDQSTALRPI 465
           +I+ T ++ +T   +  ++ +  S E    +   + ++A E  + +  + P      RP 
Sbjct: 78  DILETNTFNSTTIAMADYDMQSLSAE----INFAAAKLAREVADEWTAKDPS-----RPR 128

Query: 466 LVAASIG 486
            VA  +G
Sbjct: 129 YVAGVLG 135



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>METH_SALTY (P37586) Methionine synthase (EC 2.1.1.13)|
           (5-methyltetrahydrofolate--homocysteine
           methyltransferase) (Methionine synthase, vitamin-B12
           dependent isozyme) (MS)
          Length = 1226

 Score = 35.8 bits (81), Expect = 0.075
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 13/71 (18%)
 Frame = +1

Query: 154 LVLDGGLATELEAHGADLND------PLWSAKC-------ILSSPHLIRKVHLDYIEAGA 294
           LVLDGG+ T ++++     D        W           +LS P +I  +H  Y EAGA
Sbjct: 16  LVLDGGMGTMIQSYRLHEEDFRGERFADWPCDLKGNNDLLVLSKPEVIAAIHNAYFEAGA 75

Query: 295 NIIITASYQAT 327
           +II T ++ +T
Sbjct: 76  DIIETNTFNST 86



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>METH_ECOLI (P13009) Methionine synthase (EC 2.1.1.13)|
           (5-methyltetrahydrofolate--homocysteine
           methyltransferase) (Methionine synthase,
           vitamin-B12-dependent isozyme) (MS)
          Length = 1226

 Score = 35.8 bits (81), Expect = 0.075
 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 13/71 (18%)
 Frame = +1

Query: 154 LVLDGGLATELEAHGADLND------PLWSAKC-------ILSSPHLIRKVHLDYIEAGA 294
           LVLDGG+ T ++++  +  D        W           +LS P +I  +H  Y EAGA
Sbjct: 16  LVLDGGMGTMIQSYRLNEADFRGERFADWPCDLKGNNDLLVLSKPEVIAAIHNAYFEAGA 75

Query: 295 NIIITASYQAT 327
           +II T ++ +T
Sbjct: 76  DIIETNTFNST 86



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>METH_PSEPU (O33465) Methionine synthase (EC 2.1.1.13)|
           (5-methyltetrahydrofolate--homocysteine
           methyltransferase) (Methionine synthase, vitamin-B12
           dependent isozyme) (MS) (Fragment)
          Length = 607

 Score = 35.4 bits (80), Expect = 0.098
 Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
 Frame = +1

Query: 154 LVLDGGLATELEAHGADLND------PLWSAK-------CILSSPHLIRKVHLDYIEAGA 294
           L+LDGG+ T ++++  + +D        W +         +LS P +I  +   Y++AGA
Sbjct: 20  LILDGGMGTMIQSYRLEEHDYRGTRFADWPSDVKGNNDLLLLSRPDVIAAIEKAYLDAGA 79

Query: 295 NIIITASYQATIQGFEAKGFSKEQGENLLTKSVEIAHEAREMFLKEHPDQSTALRPILVA 474
           +I+ T ++ AT Q  +A    +     L  +   IA +  +    E PD     +P  VA
Sbjct: 80  DILETNTFNAT-QISQADYGMESLVYELNVEGARIARQVADAKTLETPD-----KPRFVA 133

Query: 475 ASIG 486
             +G
Sbjct: 134 GVLG 137



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>METH_HUMAN (Q99707) Methionine synthase (EC 2.1.1.13)|
           (5-methyltetrahydrofolate--homocysteine
           methyltransferase) (Methionine synthase, vitamin-B12
           dependent) (MS)
          Length = 1265

 Score = 34.7 bits (78), Expect = 0.17
 Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 13/71 (18%)
 Frame = +1

Query: 154 LVLDGGLATELEAH--------GADLND---PLWSAKCILS--SPHLIRKVHLDYIEAGA 294
           +VLDGG+ T ++          G +  D   PL     ILS   P +I ++H +Y+ AGA
Sbjct: 31  MVLDGGMGTMIQREKLNEEHFRGQEFKDHARPLKGNNDILSITQPDVIYQIHKEYLLAGA 90

Query: 295 NIIITASYQAT 327
           +II T ++ +T
Sbjct: 91  DIIETNTFSST 101



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>MT57_ECOLI (P25240) Modification methylase Eco57IB (EC 2.1.1.72)|
           (Adenine-specific methyltransferase Eco57IB) (M.Eco57IB)
          Length = 544

 Score = 32.7 bits (73), Expect = 0.64
 Identities = 19/46 (41%), Positives = 28/46 (60%)
 Frame = -2

Query: 445 IGLDVPSETSHVLHVQSQHSLLANFHLVLLKIPWPRTLEW*PDTMQ 308
           IG+ +PSE SHV+H QS  S L +    ++ I  P+ + W  DT+Q
Sbjct: 168 IGMVIPSEISHVMHAQSLRSYLGHVCSKIVIID-PKEI-WFEDTLQ 211



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>METH_MYCTU (O33259) Methionine synthase (EC 2.1.1.13)|
           (5-methyltetrahydrofolate--homocysteine
           methyltransferase) (Methionine synthase, vitamin-B12
           dependent isozyme) (MS)
          Length = 1192

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
 Frame = +1

Query: 154 LVLDGGLATELEAHGADLNDPLWSAKC--ILSS--PHLIRKVHLDYIEAGANIIITASY 318
           +V DG + T+L+A    L+D      C  IL+   P ++  +H +Y EAGA+ + T ++
Sbjct: 22  MVGDGAMGTQLQAADLTLDDFRGLEGCNEILNETRPDVLETIHRNYFEAGADAVETNTF 80



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>MURB_SHEON (Q8EK85) UDP-N-acetylenolpyruvoylglucosamine reductase (EC|
           1.1.1.158) (UDP-N-acetylmuramate dehydrogenase)
          Length = 341

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
 Frame = +1

Query: 289 GANIIITASYQATIQGFEAKGFSKEQGENLLTKSVEIA---HEAREMFLKEHPD--QSTA 453
           G+NI+ T  +  T+    +KG S  +  +     +E     HE  E  L  H    ++ A
Sbjct: 51  GSNIVFTDDFNGTVVRVLSKGISVTEDVSYFYLEIEAGENWHELVEFTLNNHMAGLENLA 110

Query: 454 LRPILVAA----SIGSYGAYLAD 510
           L P  V A    +IG+YG  L D
Sbjct: 111 LIPGTVGAAPIQNIGAYGVELCD 133



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>METH_CAEEL (Q09582) Probable methionine synthase (EC 2.1.1.13)|
           (5-methyltetrahydrofolate--homocysteine
           methyltransferase) (Methionine synthase, vitamin-B12
           dependent) (MS)
          Length = 1249

 Score = 30.4 bits (67), Expect = 3.2
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 13/71 (18%)
 Frame = +1

Query: 154 LVLDGGLAT--------ELEAHGADLND---PLWSAKCILS--SPHLIRKVHLDYIEAGA 294
           +++DG + T        E +  G  L D   PL     +LS   P +I K+H  Y+EAGA
Sbjct: 19  MIIDGAMGTMIQREYMEEEDFRGEILKDHDKPLKGNNDLLSITRPDIIYKIHKLYLEAGA 78

Query: 295 NIIITASYQAT 327
           + + T ++  T
Sbjct: 79  DFVETNTFSGT 89



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>CPXM_HUMAN (Q96SM3) Probable carboxypeptidase X precursor (EC 3.4.17.-)|
           (Metallocarboxypeptidase CPX-1)
          Length = 734

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 181 ELEAHGADLNDPLWSAKCILSSPHLIRKVHL 273
           +L  + ADLN PLW A+     PH++   HL
Sbjct: 432 DLNHNFADLNTPLWEAQDDGKVPHIVPNHHL 462



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>YCF1_EPIVI (Q00383) Hypothetical 208 kDa protein ycf1 (ORF 1738)|
          Length = 1738

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
 Frame = +1

Query: 229  KCILSSPHLIRKVHLDYIEAGANIIITASYQATIQGFEAKGFSKEQGENLL--TKSVEIA 402
            K I+SS H  R+++LD I    N+I+T   +  +   E   FS++ G+  +  T  + + 
Sbjct: 1547 KIIISSIHK-REINLDIIPIRKNLILTELIKNGVLIIETIRFSRKYGQFSMYQTIGISLI 1605

Query: 403  HEAREMFLKEHPDQ 444
            ++ ++   K++ DQ
Sbjct: 1606 NKNKQQTNKKYQDQ 1619



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>BKRB2_RAT (P25023) B2 bradykinin receptor (BK-2 receptor) (B2R)|
          Length = 396

 Score = 28.9 bits (63), Expect = 9.2
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 217 LWSAKCILSSPHLIRKVHLDYIEAGANI 300
           +WS   +LSSP L+ +   DY E G N+
Sbjct: 186 IWSCTLLLSSPMLVFRTMKDYREEGHNV 213


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,637,622
Number of Sequences: 219361
Number of extensions: 1033740
Number of successful extensions: 3048
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3032
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4085413911
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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