| Clone Name | bart55e01 |
|---|---|
| Clone Library Name | barley_pub |
>HMT2_MAIZE (Q9FUM9) Homocysteine S-methyltransferase 2 (EC 2.1.1.10)| (S-methylmethionine:homocysteine methyltransferase 2) (SMM:Hcy S-methyltransferase 2) (ZmHMT-2) Length = 339 Score = 219 bits (558), Expect = 4e-57 Identities = 110/126 (87%), Positives = 121/126 (96%), Gaps = 1/126 (0%) Frame = +1 Query: 154 LVLDGGLATELEAHGADLNDPLWSAKCILSSPHLIRKVHLDYIEAGANIIITASYQATIQ 333 LVLDGGLATELEA+GADLNDPLWSAKC+LSSPHLIRKVH+DY+EAGANIIITASYQATIQ Sbjct: 24 LVLDGGLATELEANGADLNDPLWSAKCLLSSPHLIRKVHMDYLEAGANIIITASYQATIQ 83 Query: 334 GFEAKGFSKEQGENLLTKSVEIAHEAREMFLKEHPDQSTALR-PILVAASIGSYGAYLAD 510 GFE+KGFSKEQ ENLLTKSVEIA EAREMFLKEH ++ST ++ P+LVAAS+GSYGAYLAD Sbjct: 84 GFESKGFSKEQSENLLTKSVEIALEAREMFLKEHLEKSTPIQHPVLVAASLGSYGAYLAD 143 Query: 511 GSEYSG 528 GSEYSG Sbjct: 144 GSEYSG 149
>HMT3_MAIZE (Q9FUM8) Homocysteine S-methyltransferase 3 (EC 2.1.1.10)| (S-methylmethionine:homocysteine methyltransferase 3) (SMM:Hcy S-methyltransferase 3) (ZmHMT-3) Length = 338 Score = 217 bits (553), Expect = 1e-56 Identities = 109/126 (86%), Positives = 121/126 (96%), Gaps = 1/126 (0%) Frame = +1 Query: 154 LVLDGGLATELEAHGADLNDPLWSAKCILSSPHLIRKVHLDYIEAGANIIITASYQATIQ 333 LVLDGGLATELEA+GADLNDPLWSAKC+LSSPHLIRKVH+DY+EAGANIIITASYQATIQ Sbjct: 24 LVLDGGLATELEANGADLNDPLWSAKCLLSSPHLIRKVHMDYLEAGANIIITASYQATIQ 83 Query: 334 GFEAKGFSKEQGENLLTKSVEIAHEAREMFLKEHPDQSTALR-PILVAASIGSYGAYLAD 510 GFE+KGFSKEQ ENLLTKSV+IA EAREMFLKEH ++ST ++ PILVAA++GSYGAYLAD Sbjct: 84 GFESKGFSKEQSENLLTKSVQIALEAREMFLKEHLEKSTPIQHPILVAAALGSYGAYLAD 143 Query: 511 GSEYSG 528 GSEYSG Sbjct: 144 GSEYSG 149
>HMT2_ARATH (Q9M1W4) Homocysteine S-methyltransferase 2 (EC 2.1.1.10)| (S-methylmethionine:homocysteine methyltransferase 2) (SMM:Hcy S-methyltransferase 2) (AtHMT-2) Length = 333 Score = 181 bits (459), Expect = 1e-45 Identities = 92/130 (70%), Positives = 105/130 (80%), Gaps = 6/130 (4%) Frame = +1 Query: 157 VLDGGLATELEAHGADLNDPLWSAKCILSSPHLIRKVHLDYIEAGANIIITASYQATIQG 336 V+DGGLATE E HGADLNDPLWSAKC+++SPHLI VHLDY+EAGA+II +ASYQATIQG Sbjct: 21 VIDGGLATEFERHGADLNDPLWSAKCLVTSPHLIHTVHLDYLEAGADIISSASYQATIQG 80 Query: 337 FEAKGFSKEQGENLLTKSVEIAHEAREMFL------KEHPDQSTALRPILVAASIGSYGA 498 FEAKGFS+E+ E+LL KSVEIA EAR + D+ RPILVAAS+GSYGA Sbjct: 81 FEAKGFSREESESLLKKSVEIATEARNSYYDKCGTSSSMDDKILKKRPILVAASVGSYGA 140 Query: 499 YLADGSEYSG 528 YLADGSEYSG Sbjct: 141 YLADGSEYSG 150
>HMT3_ARATH (Q8LAX0) Homocysteine S-methyltransferase 3 (EC 2.1.1.10)| (S-methylmethionine:homocysteine methyltransferase 3) (SMM:Hcy S-methyltransferase 3) (AtHMT-3) Length = 347 Score = 179 bits (454), Expect = 4e-45 Identities = 90/132 (68%), Positives = 105/132 (79%), Gaps = 8/132 (6%) Frame = +1 Query: 157 VLDGGLATELEAHGADLNDPLWSAKCILSSPHLIRKVHLDYIEAGANIIITASYQATIQG 336 V+DGG ATEL+ HGAD+NDPLWSAKC+++SPHL+ KVHLDY+E+GANIIITASYQATIQG Sbjct: 25 VVDGGFATELQRHGADINDPLWSAKCLITSPHLVTKVHLDYLESGANIIITASYQATIQG 84 Query: 337 FEAKGFSKEQGENLLTKSVEIAHEAREMFLKEHPDQS--------TALRPILVAASIGSY 492 F AKG S + ENLL +SVEI +EARE+F S + RPILVAAS+GSY Sbjct: 85 FVAKGLSVGEAENLLRRSVEITYEAREIFYNRCTKGSWDFAYAGKASRRPILVAASVGSY 144 Query: 493 GAYLADGSEYSG 528 GAYLADGSEYSG Sbjct: 145 GAYLADGSEYSG 156
>SMTA_ASTBI (P56707) Selenocysteine methyltransferase (EC 2.1.1.-)| (SECYS-methyltransferase) (SECYS-MT) Length = 338 Score = 179 bits (453), Expect = 6e-45 Identities = 91/133 (68%), Positives = 109/133 (81%), Gaps = 9/133 (6%) Frame = +1 Query: 157 VLDGGLATELEAHGADLNDPLWSAKCILSSPHLIRKVHLDYIEAGANIIITASYQATIQG 336 V+ GGL TEL+ HGADLNDPLWSAKC+LS PHLIR+VHLDY+E GA+IIITASYQATIQG Sbjct: 18 VIAGGLGTELQRHGADLNDPLWSAKCLLSCPHLIRQVHLDYLENGADIIITASYQATIQG 77 Query: 337 FEAKGFSKEQGENLLTKSVEIAHEAREMFLK-------EHPDQSTAL--RPILVAASIGS 489 F+AKGFS E+GE LL +SVEIA EAR+++ + ++ D S L RPIL+A S+GS Sbjct: 78 FKAKGFSDEEGEALLRRSVEIAREARDLYYQRCAESSSDNGDDSRILKQRPILIAGSVGS 137 Query: 490 YGAYLADGSEYSG 528 YGAYLADGSE+SG Sbjct: 138 YGAYLADGSEFSG 150
>HMT4_MAIZE (Q9FUM7) Homocysteine S-methyltransferase 4 (EC 2.1.1.10)| (S-methylmethionine:homocysteine methyltransferase 4) (SMM:Hcy S-methyltransferase 4) (ZmHMT-4) Length = 342 Score = 173 bits (439), Expect = 2e-43 Identities = 85/125 (68%), Positives = 104/125 (83%), Gaps = 1/125 (0%) Frame = +1 Query: 157 VLDGGLATELEAHGADLNDPLWSAKCILSSPHLIRKVHLDYIEAGANIIITASYQATIQG 336 V+DGGL TELEAHGADL+D LWSAKC+ S+PHLIRKVHLDY+EAGA++II+ASYQATI+G Sbjct: 26 VVDGGLGTELEAHGADLHDALWSAKCLASAPHLIRKVHLDYLEAGADVIISASYQATIEG 85 Query: 337 FEAKGFSKEQGENLLTKSVEIAHEAREMFLKEHPDQSTALR-PILVAASIGSYGAYLADG 513 F+++GFS+++ E LL +SV +A EAR +F E S R P LVAAS+GSYGAY ADG Sbjct: 86 FQSRGFSRDESEELLRRSVHVAQEARRVFAAEGDRSSRRGRPPALVAASVGSYGAYRADG 145 Query: 514 SEYSG 528 SEYSG Sbjct: 146 SEYSG 150
>HMT1_MAIZE (Q9FUN0) Homocysteine S-methyltransferase 1 (EC 2.1.1.10)| (S-methylmethionine:homocysteine methyltransferase 1) (SMM:Hcy S-methyltransferase 1) (ZmHMT-1) Length = 323 Score = 154 bits (388), Expect = 2e-37 Identities = 76/125 (60%), Positives = 100/125 (80%), Gaps = 1/125 (0%) Frame = +1 Query: 157 VLDGGLATELEAHGADLNDPLWSAKCILSSPHLIRKVHLDYIEAGANIIITASYQATIQG 336 V+DGG AT+LEA GAD+NDPLWSA C+++ PHL+++VH+ Y+EAGA++II++SYQATI G Sbjct: 16 VIDGGFATQLEALGADINDPLWSAACLITRPHLVKEVHMQYLEAGADVIISSSYQATIPG 75 Query: 337 FEAKGFSKEQGENLLTKSVEIAHEAREMFLKEHPDQSTAL-RPILVAASIGSYGAYLADG 513 F A+G S + E+LL SV++A+EAR+ F K +S + LVAASIGSYGAYLADG Sbjct: 76 FIARGMSVAEAEDLLRTSVKLANEARDEFWKSTLRKSKPIYNRALVAASIGSYGAYLADG 135 Query: 514 SEYSG 528 SEYSG Sbjct: 136 SEYSG 140
>HMT1_ARATH (Q9SDL7) Homocysteine S-methyltransferase 1 (EC 2.1.1.10)| (S-methylmethionine:homocysteine methyltransferase 1) (SMM:Hcy S-methyltransferase 1) (AtHMT-1) Length = 326 Score = 149 bits (377), Expect = 4e-36 Identities = 75/125 (60%), Positives = 99/125 (79%), Gaps = 1/125 (0%) Frame = +1 Query: 157 VLDGGLATELEAHGADLNDPLWSAKCILSSPHLIRKVHLDYIEAGANIIITASYQATIQG 336 V+DGG AT+LE HGA +NDPLWSA ++ +P LI++VH++Y+EAGA+I++T+SYQATI G Sbjct: 22 VVDGGFATQLEIHGAAINDPLWSAVSLIKNPELIKRVHMEYLEAGADIVVTSSYQATIPG 81 Query: 337 FEAKGFSKEQGENLLTKSVEIAHEAREMFLKEHPDQS-TALRPILVAASIGSYGAYLADG 513 F ++G S E+ E+LL KSVE+A EAR+ F ++ S + LVAASIGSYGAYLADG Sbjct: 82 FLSRGLSIEESESLLQKSVELAVEARDRFWEKVSKVSGHSYNRALVAASIGSYGAYLADG 141 Query: 514 SEYSG 528 SEYSG Sbjct: 142 SEYSG 146
>MMUM_ECOLI (Q47690) Homocysteine S-methyltransferase (EC 2.1.1.10)| (S-methylmethionine:homocysteine methyltransferase) Length = 310 Score = 142 bits (358), Expect = 6e-34 Identities = 73/125 (58%), Positives = 90/125 (72%) Frame = +1 Query: 154 LVLDGGLATELEAHGADLNDPLWSAKCILSSPHLIRKVHLDYIEAGANIIITASYQATIQ 333 L+LDG +ATELEA G +L D LWSAK ++ +P LIR+VHLDY AGA ITASYQAT Sbjct: 17 LLLDGAMATELEARGCNLADSLWSAKVLVENPELIREVHLDYYRAGAQCAITASYQATPA 76 Query: 334 GFEAKGFSKEQGENLLTKSVEIAHEAREMFLKEHPDQSTALRPILVAASIGSYGAYLADG 513 GF A+G + Q + L+ KSVE+A +ARE +L E+P T +LVA S+G YGAYLADG Sbjct: 77 GFAARGLDEAQSKALIGKSVELARKAREAYLAENPQAGT----LLVAGSVGPYGAYLADG 132 Query: 514 SEYSG 528 SEY G Sbjct: 133 SEYRG 137
>MHT1_YEAST (Q12525) Homocysteine S-methyltransferase 1 (EC 2.1.1.10)| (S-methylmethionine:homocysteine methyltransferase 1) (SMM:Hcy S-methyltransferase 1) Length = 324 Score = 53.9 bits (128), Expect = 3e-07 Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 9/69 (13%) Frame = +1 Query: 154 LVLDGGLATELEAHGADLNDPLWSAKCILSSP---------HLIRKVHLDYIEAGANIII 306 L+LDGG TELE G ++N P+WSA S ++ +++ D++ AGANI++ Sbjct: 18 LILDGGQGTELENRGININSPVWSAAPFTSESFWEPSSQERKVVEEMYRDFMIAGANILM 77 Query: 307 TASYQATIQ 333 T +YQA Q Sbjct: 78 TITYQANFQ 86
>SAM4_YEAST (Q08985) Homocysteine S-methyltransferase 2 (EC 2.1.1.10)| (S-methylmethionine:homocysteine methyltransferase 2) (SMM:Hcy S-methyltransferase 2) (S-adenosylmethionine metabolism protein 4) Length = 325 Score = 45.8 bits (107), Expect = 7e-05 Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 12/95 (12%) Frame = +1 Query: 154 LVLDGGLATELEAHGADLNDPLWSAKCILS----------SPHLIRKVHLDYIEAGANII 303 LVLDGG TELE G + +P+WS +S + +++++ D++ AGA I+ Sbjct: 18 LVLDGGQGTELENRGIKVANPVWSTIPFISESFWSDESSANRKIVKEMFNDFLNAGAEIL 77 Query: 304 ITASYQATIQGFEAKGFSKEQGE--NLLTKSVEIA 402 +T +YQ + + + E NLL + V+ + Sbjct: 78 MTTTYQTSYKSVSENTPIRTLSEYNNLLNRIVDFS 112
>METH_VIBPA (Q87L95) Methionine synthase (EC 2.1.1.13)| (5-methyltetrahydrofolate--homocysteine methyltransferase) (Methionine synthase, vitamin-B12 dependent isozyme) (MS) Length = 1226 Score = 43.5 bits (101), Expect = 4e-04 Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 16/127 (12%) Frame = +1 Query: 154 LVLDGGLATELEAHGADLND------PLWSAKC-------ILSSPHLIRKVHLDYIEAGA 294 L++DGG+ T ++ + + D W +LS P LI+++H Y+EAGA Sbjct: 18 LLIDGGMGTMIQGYKLEEQDYRGERFANWHCDLKGNNDLLVLSQPQLIKEIHSAYLEAGA 77 Query: 295 NIIITASYQAT---IQGFEAKGFSKEQGENLLTKSVEIAHEAREMFLKEHPDQSTALRPI 465 +I+ T ++ AT + +E + S+E + + ++A E + + + PD +P Sbjct: 78 DILETNTFNATTIAMADYEMESLSEE----INFAAAKLAREVADEWTAKTPD-----KPR 128 Query: 466 LVAASIG 486 VA +G Sbjct: 129 YVAGVLG 135
>METH_VIBFI (Q9AJQ8) Methionine synthase (EC 2.1.1.13)| (5-methyltetrahydrofolate--homocysteine methyltransferase) (Methionine synthase, vitamin-B12 dependent isozyme) (MS) Length = 1226 Score = 41.2 bits (95), Expect = 0.002 Identities = 31/127 (24%), Positives = 63/127 (49%), Gaps = 16/127 (12%) Frame = +1 Query: 154 LVLDGGLATELEAHGADLND------PLWSAKC-------ILSSPHLIRKVHLDYIEAGA 294 L++DGG+ T ++ + + D W +LS P +IR +H Y+EAGA Sbjct: 19 LLIDGGMGTMIQGYKFEEKDYRGGRFNQWHCDLKGNNDLLVLSQPQIIRDIHEAYLEAGA 78 Query: 295 NIIITASYQAT---IQGFEAKGFSKEQGENLLTKSVEIAHEAREMFLKEHPDQSTALRPI 465 +I+ T ++ AT + ++ + S+E + ++ ++A E + + ++ P+ +P Sbjct: 79 DILETNTFNATTIAMADYDMESLSEE----INFEAAKLAREVADKWTEKTPN-----KPR 129 Query: 466 LVAASIG 486 VA +G Sbjct: 130 YVAGVLG 136
>METH_VIBF1 (Q5E814) Methionine synthase (EC 2.1.1.13)| (5-methyltetrahydrofolate--homocysteine methyltransferase) (Methionine synthase, vitamin-B12 dependent isozyme) (MS) Length = 1226 Score = 41.2 bits (95), Expect = 0.002 Identities = 31/127 (24%), Positives = 63/127 (49%), Gaps = 16/127 (12%) Frame = +1 Query: 154 LVLDGGLATELEAHGADLND------PLWSAKC-------ILSSPHLIRKVHLDYIEAGA 294 L++DGG+ T ++ + + D W +LS P +IR +H Y+EAGA Sbjct: 19 LLIDGGMGTMIQGYKFEEEDYRGERFNKWHCDLKGNNDLLVLSQPQIIRDIHEAYLEAGA 78 Query: 295 NIIITASYQAT---IQGFEAKGFSKEQGENLLTKSVEIAHEAREMFLKEHPDQSTALRPI 465 +I+ T ++ AT + ++ + S+E + ++ ++A E + + ++ P+ +P Sbjct: 79 DILETNTFNATTIAMADYDMESLSEE----INFEAAKLAREVADKWTEKTPN-----KPR 129 Query: 466 LVAASIG 486 VA +G Sbjct: 130 YVAGVLG 136
>METH_VIBVY (Q7MHB1) Methionine synthase (EC 2.1.1.13)| (5-methyltetrahydrofolate--homocysteine methyltransferase) (Methionine synthase, vitamin-B12 dependent isozyme) (MS) Length = 1226 Score = 40.0 bits (92), Expect = 0.004 Identities = 31/127 (24%), Positives = 63/127 (49%), Gaps = 16/127 (12%) Frame = +1 Query: 154 LVLDGGLATELEAHGADLNDPL------WSAKC-------ILSSPHLIRKVHLDYIEAGA 294 L++DGG+ T ++ + D W + +L+ P LI+++H Y+EAGA Sbjct: 18 LLIDGGMGTMIQGYKLQEQDYRGERFADWHSDLKGNNDLLVLTQPQLIKEIHHAYLEAGA 77 Query: 295 NIIITASYQAT---IQGFEAKGFSKEQGENLLTKSVEIAHEAREMFLKEHPDQSTALRPI 465 +I+ T ++ AT + ++ + S+E + + ++A EA + + ++P +P Sbjct: 78 DILETNTFNATTIAMADYDMESLSEE----INFAAAKLAREAADEWTAKNP-----AKPR 128 Query: 466 LVAASIG 486 VA +G Sbjct: 129 YVAGVLG 135
>METH_VIBVU (Q8DCJ7) Methionine synthase (EC 2.1.1.13)| (5-methyltetrahydrofolate--homocysteine methyltransferase) (Methionine synthase, vitamin-B12 dependent isozyme) (MS) Length = 1226 Score = 40.0 bits (92), Expect = 0.004 Identities = 31/127 (24%), Positives = 62/127 (48%), Gaps = 16/127 (12%) Frame = +1 Query: 154 LVLDGGLATELEAHGADLNDPL------WSAKC-------ILSSPHLIRKVHLDYIEAGA 294 L++DGG+ T ++ + D W + +L+ P LI+++H Y+EAGA Sbjct: 18 LLIDGGMGTMIQGYKLQEQDYRGERFADWHSDLKGNNDLLVLTQPQLIKEIHHAYLEAGA 77 Query: 295 NIIITASYQAT---IQGFEAKGFSKEQGENLLTKSVEIAHEAREMFLKEHPDQSTALRPI 465 +I+ T ++ AT + ++ + S+E + + +A EA + + ++P +P Sbjct: 78 DILETNTFNATTIAMADYDMESLSEE----INFAAARLAREAADEWTAQNP-----AKPR 128 Query: 466 LVAASIG 486 VA +G Sbjct: 129 YVAGVLG 135
>METH_VIBCH (Q9KUW9) Methionine synthase (EC 2.1.1.13)| (5-methyltetrahydrofolate--homocysteine methyltransferase) (Methionine synthase, vitamin-B12 dependent isozyme) (MS) Length = 1226 Score = 37.7 bits (86), Expect = 0.020 Identities = 31/127 (24%), Positives = 62/127 (48%), Gaps = 16/127 (12%) Frame = +1 Query: 154 LVLDGGLATELEAH--------GADLNDPLWSAK-----CILSSPHLIRKVHLDYIEAGA 294 L++DGG+ T ++++ GA D K +L+ P +I+++H Y+EAGA Sbjct: 18 LLIDGGMGTMIQSYKLQEEDYRGARFVDWHCDLKGNNDLLVLTQPQIIKEIHSAYLEAGA 77 Query: 295 NIIITASYQAT---IQGFEAKGFSKEQGENLLTKSVEIAHEAREMFLKEHPDQSTALRPI 465 +I+ T ++ +T + ++ + S E + + ++A E + + + P RP Sbjct: 78 DILETNTFNSTTIAMADYDMQSLSAE----INFAAAKLAREVADEWTAKDPS-----RPR 128 Query: 466 LVAASIG 486 VA +G Sbjct: 129 YVAGVLG 135
>METH_SALTY (P37586) Methionine synthase (EC 2.1.1.13)| (5-methyltetrahydrofolate--homocysteine methyltransferase) (Methionine synthase, vitamin-B12 dependent isozyme) (MS) Length = 1226 Score = 35.8 bits (81), Expect = 0.075 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 13/71 (18%) Frame = +1 Query: 154 LVLDGGLATELEAHGADLND------PLWSAKC-------ILSSPHLIRKVHLDYIEAGA 294 LVLDGG+ T ++++ D W +LS P +I +H Y EAGA Sbjct: 16 LVLDGGMGTMIQSYRLHEEDFRGERFADWPCDLKGNNDLLVLSKPEVIAAIHNAYFEAGA 75 Query: 295 NIIITASYQAT 327 +II T ++ +T Sbjct: 76 DIIETNTFNST 86
>METH_ECOLI (P13009) Methionine synthase (EC 2.1.1.13)| (5-methyltetrahydrofolate--homocysteine methyltransferase) (Methionine synthase, vitamin-B12-dependent isozyme) (MS) Length = 1226 Score = 35.8 bits (81), Expect = 0.075 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 13/71 (18%) Frame = +1 Query: 154 LVLDGGLATELEAHGADLND------PLWSAKC-------ILSSPHLIRKVHLDYIEAGA 294 LVLDGG+ T ++++ + D W +LS P +I +H Y EAGA Sbjct: 16 LVLDGGMGTMIQSYRLNEADFRGERFADWPCDLKGNNDLLVLSKPEVIAAIHNAYFEAGA 75 Query: 295 NIIITASYQAT 327 +II T ++ +T Sbjct: 76 DIIETNTFNST 86
>METH_PSEPU (O33465) Methionine synthase (EC 2.1.1.13)| (5-methyltetrahydrofolate--homocysteine methyltransferase) (Methionine synthase, vitamin-B12 dependent isozyme) (MS) (Fragment) Length = 607 Score = 35.4 bits (80), Expect = 0.098 Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 13/124 (10%) Frame = +1 Query: 154 LVLDGGLATELEAHGADLND------PLWSAK-------CILSSPHLIRKVHLDYIEAGA 294 L+LDGG+ T ++++ + +D W + +LS P +I + Y++AGA Sbjct: 20 LILDGGMGTMIQSYRLEEHDYRGTRFADWPSDVKGNNDLLLLSRPDVIAAIEKAYLDAGA 79 Query: 295 NIIITASYQATIQGFEAKGFSKEQGENLLTKSVEIAHEAREMFLKEHPDQSTALRPILVA 474 +I+ T ++ AT Q +A + L + IA + + E PD +P VA Sbjct: 80 DILETNTFNAT-QISQADYGMESLVYELNVEGARIARQVADAKTLETPD-----KPRFVA 133 Query: 475 ASIG 486 +G Sbjct: 134 GVLG 137
>METH_HUMAN (Q99707) Methionine synthase (EC 2.1.1.13)| (5-methyltetrahydrofolate--homocysteine methyltransferase) (Methionine synthase, vitamin-B12 dependent) (MS) Length = 1265 Score = 34.7 bits (78), Expect = 0.17 Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 13/71 (18%) Frame = +1 Query: 154 LVLDGGLATELEAH--------GADLND---PLWSAKCILS--SPHLIRKVHLDYIEAGA 294 +VLDGG+ T ++ G + D PL ILS P +I ++H +Y+ AGA Sbjct: 31 MVLDGGMGTMIQREKLNEEHFRGQEFKDHARPLKGNNDILSITQPDVIYQIHKEYLLAGA 90 Query: 295 NIIITASYQAT 327 +II T ++ +T Sbjct: 91 DIIETNTFSST 101
>MT57_ECOLI (P25240) Modification methylase Eco57IB (EC 2.1.1.72)| (Adenine-specific methyltransferase Eco57IB) (M.Eco57IB) Length = 544 Score = 32.7 bits (73), Expect = 0.64 Identities = 19/46 (41%), Positives = 28/46 (60%) Frame = -2 Query: 445 IGLDVPSETSHVLHVQSQHSLLANFHLVLLKIPWPRTLEW*PDTMQ 308 IG+ +PSE SHV+H QS S L + ++ I P+ + W DT+Q Sbjct: 168 IGMVIPSEISHVMHAQSLRSYLGHVCSKIVIID-PKEI-WFEDTLQ 211
>METH_MYCTU (O33259) Methionine synthase (EC 2.1.1.13)| (5-methyltetrahydrofolate--homocysteine methyltransferase) (Methionine synthase, vitamin-B12 dependent isozyme) (MS) Length = 1192 Score = 31.2 bits (69), Expect = 1.9 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 4/59 (6%) Frame = +1 Query: 154 LVLDGGLATELEAHGADLNDPLWSAKC--ILSS--PHLIRKVHLDYIEAGANIIITASY 318 +V DG + T+L+A L+D C IL+ P ++ +H +Y EAGA+ + T ++ Sbjct: 22 MVGDGAMGTQLQAADLTLDDFRGLEGCNEILNETRPDVLETIHRNYFEAGADAVETNTF 80
>MURB_SHEON (Q8EK85) UDP-N-acetylenolpyruvoylglucosamine reductase (EC| 1.1.1.158) (UDP-N-acetylmuramate dehydrogenase) Length = 341 Score = 31.2 bits (69), Expect = 1.9 Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 9/83 (10%) Frame = +1 Query: 289 GANIIITASYQATIQGFEAKGFSKEQGENLLTKSVEIA---HEAREMFLKEHPD--QSTA 453 G+NI+ T + T+ +KG S + + +E HE E L H ++ A Sbjct: 51 GSNIVFTDDFNGTVVRVLSKGISVTEDVSYFYLEIEAGENWHELVEFTLNNHMAGLENLA 110 Query: 454 LRPILVAA----SIGSYGAYLAD 510 L P V A +IG+YG L D Sbjct: 111 LIPGTVGAAPIQNIGAYGVELCD 133
>METH_CAEEL (Q09582) Probable methionine synthase (EC 2.1.1.13)| (5-methyltetrahydrofolate--homocysteine methyltransferase) (Methionine synthase, vitamin-B12 dependent) (MS) Length = 1249 Score = 30.4 bits (67), Expect = 3.2 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 13/71 (18%) Frame = +1 Query: 154 LVLDGGLAT--------ELEAHGADLND---PLWSAKCILS--SPHLIRKVHLDYIEAGA 294 +++DG + T E + G L D PL +LS P +I K+H Y+EAGA Sbjct: 19 MIIDGAMGTMIQREYMEEEDFRGEILKDHDKPLKGNNDLLSITRPDIIYKIHKLYLEAGA 78 Query: 295 NIIITASYQAT 327 + + T ++ T Sbjct: 79 DFVETNTFSGT 89
>CPXM_HUMAN (Q96SM3) Probable carboxypeptidase X precursor (EC 3.4.17.-)| (Metallocarboxypeptidase CPX-1) Length = 734 Score = 28.9 bits (63), Expect = 9.2 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +1 Query: 181 ELEAHGADLNDPLWSAKCILSSPHLIRKVHL 273 +L + ADLN PLW A+ PH++ HL Sbjct: 432 DLNHNFADLNTPLWEAQDDGKVPHIVPNHHL 462
>YCF1_EPIVI (Q00383) Hypothetical 208 kDa protein ycf1 (ORF 1738)| Length = 1738 Score = 28.9 bits (63), Expect = 9.2 Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 2/74 (2%) Frame = +1 Query: 229 KCILSSPHLIRKVHLDYIEAGANIIITASYQATIQGFEAKGFSKEQGENLL--TKSVEIA 402 K I+SS H R+++LD I N+I+T + + E FS++ G+ + T + + Sbjct: 1547 KIIISSIHK-REINLDIIPIRKNLILTELIKNGVLIIETIRFSRKYGQFSMYQTIGISLI 1605 Query: 403 HEAREMFLKEHPDQ 444 ++ ++ K++ DQ Sbjct: 1606 NKNKQQTNKKYQDQ 1619
>BKRB2_RAT (P25023) B2 bradykinin receptor (BK-2 receptor) (B2R)| Length = 396 Score = 28.9 bits (63), Expect = 9.2 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +1 Query: 217 LWSAKCILSSPHLIRKVHLDYIEAGANI 300 +WS +LSSP L+ + DY E G N+ Sbjct: 186 IWSCTLLLSSPMLVFRTMKDYREEGHNV 213 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,637,622 Number of Sequences: 219361 Number of extensions: 1033740 Number of successful extensions: 3048 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 2982 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3032 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4085413911 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)