ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart54h06 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ628169.1| Hordeum vulgare bci3 gene for putative acid phosphatase Length = 2748 Score = 440 bits (222), Expect = e-120 Identities = 377/426 (88%), Gaps = 7/426 (1%) Strand = Plus / Plus Query: 1 cctcatgcagcgcatgggaggtcaacatccgcatgccgacgtcggcggcggacgtggacg 60 |||||| ||||||||||||||| ||||||| |||||| |||||||||| |||||||| Sbjct: 1854 cctcatccagcgcatgggaggtgaacatccagatgccggcgtcggcggc---cgtggacg 1910 Query: 61 aggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggcaagcacg 120 | || |||| | ||||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 1911 atgctgtgg---caccgctcatccacgcgctgcggccgctcctgggctccggcaagcaag 1967 Query: 121 ccggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactgga 180 |||| ||||||||||| |||||| |||||| ||||||||| |||||||||||||||||| Sbjct: 1968 ccggcgtggcgtgcgatagctggcggctgggcgtggaggcgtacaacgtgcgggactgga 2027 Query: 181 agacggtgcccgcgagctgcgagggctacgtcggccactacatgctcggcagccatttcc 240 |||||||||| || | ||||||||||||||| || |||||||||||||||| ||| |||| Sbjct: 2028 agacggtgccggccaactgcgagggctacgtggggcactacatgctcggcaaccacttcc 2087 Query: 241 gccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcg 300 | ||||||| |||||||||||||||||||||| ||||||| |||||| ||||||||||| Sbjct: 2088 ggcgcgactgcaaggtcgtcatcgaccaggccatcgcctacgtcgacggcctcaagctcg 2147 Query: 301 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacctcc 360 |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 2148 ccggcaacggcaaggacgtgtgggtcttcgacatcgacgagaccaccctctccaacctcc 2207 Query: 361 cctactacgcccaagcacggcttcggggctacaccgttcaacgcgaccagcttcaacgca 420 | ||||||| ||| ||||||||| ||||||| || | ||||||||| |||||| |||| Sbjct: 2208 cttactacg-ccacgcacggctttggggctaggccatacaacgcgacgagcttcgacgcg 2266 Query: 421 tacgtg 426 |||||| Sbjct: 2267 tacgtg 2272
>emb|AJ250282.2|HVU250282 Hordeum vulgare partial mRNA for putative acid phosphatase (bci-3 gene) Length = 1152 Score = 440 bits (222), Expect = e-120 Identities = 377/426 (88%), Gaps = 7/426 (1%) Strand = Plus / Plus Query: 1 cctcatgcagcgcatgggaggtcaacatccgcatgccgacgtcggcggcggacgtggacg 60 |||||| ||||||||||||||| ||||||| |||||| |||||||||| |||||||| Sbjct: 258 cctcatccagcgcatgggaggtgaacatccagatgccggcgtcggcggc---cgtggacg 314 Query: 61 aggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggcaagcacg 120 | || |||| | ||||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 315 atgctgtgg---caccgctcatccacgcgctgcggccgctcctgggctccggcaagcaag 371 Query: 121 ccggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactgga 180 |||| ||||||||||| |||||| |||||| ||||||||| |||||||||||||||||| Sbjct: 372 ccggcgtggcgtgcgatagctggcggctgggcgtggaggcgtacaacgtgcgggactgga 431 Query: 181 agacggtgcccgcgagctgcgagggctacgtcggccactacatgctcggcagccatttcc 240 |||||||||| || | ||||||||||||||| || |||||||||||||||| ||| |||| Sbjct: 432 agacggtgccggccaactgcgagggctacgtggggcactacatgctcggcaaccacttcc 491 Query: 241 gccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcg 300 | ||||||| |||||||||||||||||||||| ||||||| |||||| ||||||||||| Sbjct: 492 ggcgcgactgcaaggtcgtcatcgaccaggccatcgcctacgtcgacggcctcaagctcg 551 Query: 301 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacctcc 360 |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 552 ccggcaacggcaaggacgtgtgggtcttcgacatcgacgagaccaccctctccaacctcc 611 Query: 361 cctactacgcccaagcacggcttcggggctacaccgttcaacgcgaccagcttcaacgca 420 | ||||||| ||| ||||||||| ||||||| || | ||||||||| |||||| |||| Sbjct: 612 cttactacg-ccacgcacggctttggggctaggccatacaacgcgacgagcttcgacgcg 670 Query: 421 tacgtg 426 |||||| Sbjct: 671 tacgtg 676
>gb|AC145271.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1140B01, complete sequence Length = 135184 Score = 272 bits (137), Expect = 9e-70 Identities = 238/269 (88%), Gaps = 2/269 (0%) Strand = Plus / Minus Query: 119 cgccggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactg 178 |||||| |||||||||||||||||| ||||| ||||||||||||||||||| || Sbjct: 92232 cgccggcgtggcgtgcgacagctggaggctggcggtggaggcgcacaacgtgatccggtg 92173 Query: 179 gaagacggtgcccgcgagctgcgagggctacgtcggccactacatgctcggcagccattt 238 |||||||||||| || |||||||||||||||||||||||||||||||||||| |||| | Sbjct: 92172 gaagacggtgccggccagctgcgagggctacgtcggccactacatgctcggcggccacta 92113 Query: 239 ccgccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagct 298 |||||||||||| | |||||| ||||| ||||| ||||||| || ||| ||||||||| Sbjct: 92112 ccgccgcgactc-accgtcgtcgtcgacgaggccatcgcctacgtggacagcctcaagct 92054 Query: 299 cgccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacct 358 ||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||| Sbjct: 92053 cgccggcaacggcaaggagatctgggtgttcgacatcgacgagacctccctctccaacct 91994 Query: 359 cccctactacgcccaagcacggcttcggg 387 |||||||| || |||||||||| |||||| Sbjct: 91993 cccctacttcg-ccaagcacggattcggg 91966 Score = 226 bits (114), Expect = 5e-56 Identities = 233/270 (86%), Gaps = 2/270 (0%) Strand = Plus / Minus Query: 119 cgccggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactg 178 |||||| |||||||||||||||||| ||| || |||||||| ||||||||| | || Sbjct: 105854 cgccggcgtggcgtgcgacagctggaggctaggcgtggaggcacacaacgtgatcgggtg 105795 Query: 179 gaagacggtgcccgcgagctgcgagggctacgtcggccactacatgctcggcag-ccatt 237 |||||||||||| || || |||||||||||||||||||||||||||||||| | ||| | Sbjct: 105794 gaagacggtgccggccaggtgcgagggctacgtcggccactacatgctcgggtggccact 105735 Query: 238 tccgccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagc 297 |||||| |||||| |||||||||||| ||||| ||||||| | ||| |||| ||| Sbjct: 105734 accgccgtgactccgccgtcgtcatcgacgaggccatcgcctacgccgagagcctccagc 105675 Query: 298 tcgccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacc 357 || ||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||| Sbjct: 105674 tctccggcaacggcaaggagatctgggtgttcgacatcgacgagacctccctctccaacc 105615 Query: 358 tcccctactacgcccaagcacggcttcggg 387 |||||||||||| |||||||||| |||||| Sbjct: 105614 tcccctactacg-ccaagcacggattcggg 105586 Score = 226 bits (114), Expect = 5e-56 Identities = 234/270 (86%), Gaps = 3/270 (1%) Strand = Plus / Minus Query: 119 cgccggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactg 178 |||||| ||||| |||||||||||| |||||| |||||||||||||||||| ||||| Sbjct: 83956 cgccggcgtggcctgcgacagctggaggctgggcgtggaggcgcacaacgtgatcgactg 83897 Query: 179 gaagacggtgcccgc-gagctgcgagggctacgtcggccactacatgctcggcagccatt 237 || ||||||||| || ||| |||||||||||| |||||||||||||||| ||| || | Sbjct: 83896 gaggacggtgccagccgag-tgcgagggctacatcggccactacatgctaggcgaacact 83838 Query: 238 tccgccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagc 297 ||||||||||| | |||||| ||||| ||||| ||||||| | ||| ||||||||| Sbjct: 83837 accgccgcgacttcgccgtcgtcgtcgacgaggccgtcgcctacgccgagaccctcaagc 83778 Query: 298 tcgccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacc 357 |||||||||| ||||||||| ||||||| |||||||||||||||||| | |||||||||| Sbjct: 83777 tcgccggcaatggcaaggagatctgggtgttcgacatcgacgagacctctctctccaacc 83718 Query: 358 tcccctactacgcccaagcacggcttcggg 387 |||||||||||| ||||||||||||||||| Sbjct: 83717 tcccctactacg-ccaagcacggcttcggg 83689 Score = 93.7 bits (47), Expect = 5e-16 Identities = 53/55 (96%) Strand = Plus / Minus Query: 59 cgaggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggc 113 |||||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 92304 cgaggccgtggtggcgccgctcatccacgcgctgcggccgctgctgggctccggc 92250 Score = 85.7 bits (43), Expect = 1e-13 Identities = 52/55 (94%) Strand = Plus / Minus Query: 59 cgaggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggc 113 |||||| |||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 105926 cgaggccgtggtggcgccgatcatccacgcgctgcggccgctgctgggctccggc 105872 Score = 73.8 bits (37), Expect = 4e-10 Identities = 103/125 (82%) Strand = Plus / Minus Query: 241 gccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcg 300 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 5913 gccgcgactccgacgtggtgatcaacgaggccatcgcctacgccgagagcctcaagctct 5854 Query: 301 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacctcc 360 ||||| | ||||||||| ||||||| |||||| |||| |||||| ||||||||| ||| | Sbjct: 5853 ccggccatggcaaggagatctgggtgttcgacgtcgatgagaccgccctctccaccctgc 5794 Query: 361 cctac 365 ||||| Sbjct: 5793 cctac 5789 Score = 69.9 bits (35), Expect = 7e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 59 cgaggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggc 113 |||||| |||||||||||| | || |||||||| ||||||||||||||||||||| Sbjct: 84028 cgaggctgtggtggcgccgatcatacacgcgctacggccgctgctgggctccggc 83974
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 272 bits (137), Expect = 9e-70 Identities = 238/269 (88%), Gaps = 2/269 (0%) Strand = Plus / Minus Query: 119 cgccggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactg 178 |||||| |||||||||||||||||| ||||| ||||||||||||||||||| || Sbjct: 5559023 cgccggcgtggcgtgcgacagctggaggctggcggtggaggcgcacaacgtgatccggtg 5558964 Query: 179 gaagacggtgcccgcgagctgcgagggctacgtcggccactacatgctcggcagccattt 238 |||||||||||| || |||||||||||||||||||||||||||||||||||| |||| | Sbjct: 5558963 gaagacggtgccggccagctgcgagggctacgtcggccactacatgctcggcggccacta 5558904 Query: 239 ccgccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagct 298 |||||||||||| | |||||| ||||| ||||| ||||||| || ||| ||||||||| Sbjct: 5558903 ccgccgcgactc-accgtcgtcgtcgacgaggccatcgcctacgtggacagcctcaagct 5558845 Query: 299 cgccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacct 358 ||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||| Sbjct: 5558844 cgccggcaacggcaaggagatctgggtgttcgacatcgacgagacctccctctccaacct 5558785 Query: 359 cccctactacgcccaagcacggcttcggg 387 |||||||| || |||||||||| |||||| Sbjct: 5558784 cccctacttcg-ccaagcacggattcggg 5558757 Score = 226 bits (114), Expect = 5e-56 Identities = 233/270 (86%), Gaps = 2/270 (0%) Strand = Plus / Minus Query: 119 cgccggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactg 178 |||||| |||||||||||||||||| ||| || |||||||| ||||||||| | || Sbjct: 5572645 cgccggcgtggcgtgcgacagctggaggctaggcgtggaggcacacaacgtgatcgggtg 5572586 Query: 179 gaagacggtgcccgcgagctgcgagggctacgtcggccactacatgctcggcag-ccatt 237 |||||||||||| || || |||||||||||||||||||||||||||||||| | ||| | Sbjct: 5572585 gaagacggtgccggccaggtgcgagggctacgtcggccactacatgctcgggtggccact 5572526 Query: 238 tccgccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagc 297 |||||| |||||| |||||||||||| ||||| ||||||| | ||| |||| ||| Sbjct: 5572525 accgccgtgactccgccgtcgtcatcgacgaggccatcgcctacgccgagagcctccagc 5572466 Query: 298 tcgccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacc 357 || ||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||| Sbjct: 5572465 tctccggcaacggcaaggagatctgggtgttcgacatcgacgagacctccctctccaacc 5572406 Query: 358 tcccctactacgcccaagcacggcttcggg 387 |||||||||||| |||||||||| |||||| Sbjct: 5572405 tcccctactacg-ccaagcacggattcggg 5572377 Score = 226 bits (114), Expect = 5e-56 Identities = 234/270 (86%), Gaps = 3/270 (1%) Strand = Plus / Minus Query: 119 cgccggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactg 178 |||||| ||||| |||||||||||| |||||| |||||||||||||||||| ||||| Sbjct: 5550747 cgccggcgtggcctgcgacagctggaggctgggcgtggaggcgcacaacgtgatcgactg 5550688 Query: 179 gaagacggtgcccgc-gagctgcgagggctacgtcggccactacatgctcggcagccatt 237 || ||||||||| || ||| |||||||||||| |||||||||||||||| ||| || | Sbjct: 5550687 gaggacggtgccagccgag-tgcgagggctacatcggccactacatgctaggcgaacact 5550629 Query: 238 tccgccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagc 297 ||||||||||| | |||||| ||||| ||||| ||||||| | ||| ||||||||| Sbjct: 5550628 accgccgcgacttcgccgtcgtcgtcgacgaggccgtcgcctacgccgagaccctcaagc 5550569 Query: 298 tcgccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacc 357 |||||||||| ||||||||| ||||||| |||||||||||||||||| | |||||||||| Sbjct: 5550568 tcgccggcaatggcaaggagatctgggtgttcgacatcgacgagacctctctctccaacc 5550509 Query: 358 tcccctactacgcccaagcacggcttcggg 387 |||||||||||| ||||||||||||||||| Sbjct: 5550508 tcccctactacg-ccaagcacggcttcggg 5550480 Score = 97.6 bits (49), Expect = 3e-17 Identities = 106/125 (84%) Strand = Plus / Minus Query: 241 gccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcg 300 ||||||||||| | || |||||| || ||||| ||||||| | ||| |||||||||| Sbjct: 5429968 gccgcgactccgatgtggtcatcaacaaggccatcgcctacgccgagagcctcaagctct 5429909 Query: 301 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacctcc 360 ||||| | ||||||||| ||||||| ||||||||||||||||||||||||| || ||| | Sbjct: 5429908 ccggccatggcaaggagatctgggtgttcgacatcgacgagaccaccctcttcaccctgc 5429849 Query: 361 cctac 365 ||||| Sbjct: 5429848 cctac 5429844 Score = 93.7 bits (47), Expect = 5e-16 Identities = 53/55 (96%) Strand = Plus / Minus Query: 59 cgaggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggc 113 |||||| |||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 5559095 cgaggccgtggtggcgccgctcatccacgcgctgcggccgctgctgggctccggc 5559041 Score = 85.7 bits (43), Expect = 1e-13 Identities = 52/55 (94%) Strand = Plus / Minus Query: 59 cgaggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggc 113 |||||| |||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 5572717 cgaggccgtggtggcgccgatcatccacgcgctgcggccgctgctgggctccggc 5572663 Score = 75.8 bits (38), Expect = 1e-10 Identities = 95/114 (83%) Strand = Plus / Minus Query: 241 gccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcg 300 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 5453573 gccgcgactccgacgtggtgatcaacgaggccgtcgcctacgccgagagcctcaagctct 5453514 Query: 301 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctcca 354 |||||| ||||||||||||||||| |||||| ||||||||||| | ||||||| Sbjct: 5453513 ccggcagtggcaaggaggtctgggtgttcgacgtcgacgagaccgcactctcca 5453460 Score = 73.8 bits (37), Expect = 4e-10 Identities = 103/125 (82%) Strand = Plus / Minus Query: 241 gccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcg 300 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 5472704 gccgcgactccgacgtggtgatcaacgaggccatcgcctacgccgagagcctcaagctct 5472645 Query: 301 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacctcc 360 ||||| | ||||||||| ||||||| |||||| |||| |||||| ||||||||| ||| | Sbjct: 5472644 ccggccatggcaaggagatctgggtgttcgacgtcgatgagaccgccctctccaccctgc 5472585 Query: 361 cctac 365 ||||| Sbjct: 5472584 cctac 5472580 Score = 69.9 bits (35), Expect = 7e-09 Identities = 50/55 (90%) Strand = Plus / Minus Query: 59 cgaggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggc 113 |||||| |||||||||||| | || |||||||| ||||||||||||||||||||| Sbjct: 5550819 cgaggctgtggtggcgccgatcatacacgcgctacggccgctgctgggctccggc 5550765 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 290 cctcaagctcgccggcaacggcaaggaggtctg 322 |||||||||| ||||||| |||||||||||||| Sbjct: 5464306 cctcaagctctccggcaatggcaaggaggtctg 5464274 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Minus Query: 176 ctggaagacggtgcccgcgagctgcgagggctacgtcg 213 ||||||||||||||| |||| ||||| |||||||||| Sbjct: 5464424 ctggaagacggtgccggcgaactgcgctggctacgtcg 5464387 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 290 cctcaagctcgccggcaacggcaaggagg 318 ||||| |||||||||||||| |||||||| Sbjct: 22709211 cctcatgctcgccggcaacgtcaaggagg 22709183
>dbj|AK061404.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-A01, full insert sequence Length = 1131 Score = 232 bits (117), Expect = 8e-58 Identities = 239/277 (86%), Gaps = 2/277 (0%) Strand = Plus / Plus Query: 119 cgccggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactg 178 |||||| |||||||||||||||||| ||| || |||||||| ||||||||| | || Sbjct: 217 cgccggcgtggcgtgcgacagctggaggctaggcgtggaggcacacaacgtgatcgggtg 276 Query: 179 gaagacggtgcccgcgagctgcgagggctacgtcggccactacatgctcggcag-ccatt 237 |||||||||||| || || |||||||||||||||||||||||||||||||| | ||| | Sbjct: 277 gaagacggtgccggccaggtgcgagggctacgtcggccactacatgctcgggtggccact 336 Query: 238 tccgccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagc 297 |||||| |||||| |||||||||||| ||||| ||||||| | ||| |||| ||| Sbjct: 337 accgccgtgactccgccgtcgtcatcgacgaggccatcgcctacgccgagagcctccagc 396 Query: 298 tcgccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacc 357 || ||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||| Sbjct: 397 tctccggcaacggcaaggagatctgggtgttcgacatcgacgagacctccctctccaacc 456 Query: 358 tcccctactacgcccaagcacggcttcggggctacac 394 |||||||||||| |||||||||| ||||| ||||||| Sbjct: 457 tcccctactacg-ccaagcacggattcggagctacac 492 Score = 85.7 bits (43), Expect = 1e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 59 cgaggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggc 113 |||||| |||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct: 145 cgaggccgtggtggcgccgatcatccacgcgctgcggccgctgctgggctccggc 199
>dbj|AK059825.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-F04, full insert sequence Length = 1076 Score = 230 bits (116), Expect = 3e-57 Identities = 254/296 (85%), Gaps = 3/296 (1%) Strand = Plus / Plus Query: 119 cgccggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactg 178 |||||| ||||| |||||||||||| |||||| |||||||||||||||||| ||||| Sbjct: 244 cgccggcgtggcctgcgacagctggaggctgggcgtggaggcgcacaacgtgatcgactg 303 Query: 179 gaagacggtgcccgc-gagctgcgagggctacgtcggccactacatgctcggcagccatt 237 || ||||||||| || ||| |||||||||||| |||||||||||||||| ||| || | Sbjct: 304 gaggacggtgccagccgag-tgcgagggctacatcggccactacatgctaggcgaacact 362 Query: 238 tccgccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagc 297 ||||||||||| | |||||| ||||| ||||| ||||||| | ||| ||||||||| Sbjct: 363 accgccgcgacttcgccgtcgtcgtcgacgaggccgtcgcctacgccgagaccctcaagc 422 Query: 298 tcgccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacc 357 |||||||||| ||||||||| ||||||| |||||||||||||||||| | |||||||||| Sbjct: 423 tcgccggcaatggcaaggagatctgggtgttcgacatcgacgagacctctctctccaacc 482 Query: 358 tcccctactacgcccaagcacggcttcggggctacaccgttcaacgcgaccagctt 413 |||||||||||| |||||||||||||||| || || || | ||||||||| ||||| Sbjct: 483 tcccctactacg-ccaagcacggcttcggagcaacgccatacaacgcgacaagctt 537 Score = 69.9 bits (35), Expect = 7e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 59 cgaggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggc 113 |||||| |||||||||||| | || |||||||| ||||||||||||||||||||| Sbjct: 172 cgaggctgtggtggcgccgatcatacacgcgctacggccgctgctgggctccggc 226
>dbj|AK066719.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082K18, full insert sequence Length = 2143 Score = 226 bits (114), Expect = 5e-56 Identities = 234/270 (86%), Gaps = 3/270 (1%) Strand = Plus / Plus Query: 119 cgccggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactg 178 |||||| ||||| |||||||||||| |||||| |||||||||||||||||| ||||| Sbjct: 242 cgccggcgtggcctgcgacagctggaggctgggcgtggaggcgcacaacgtgatcgactg 301 Query: 179 gaagacggtgcccg-cgagctgcgagggctacgtcggccactacatgctcggcagccatt 237 || ||||||||| | |||| |||||||||||| |||||||||||||||| ||| || | Sbjct: 302 gaggacggtgccagccgag-tgcgagggctacatcggccactacatgctaggcgaacact 360 Query: 238 tccgccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagc 297 ||||||||||| | |||||| ||||| ||||| ||||||| | ||| ||||||||| Sbjct: 361 accgccgcgacttcgccgtcgtcgtcgacgaggccgtcgcctacgccgagaccctcaagc 420 Query: 298 tcgccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacc 357 |||||||||| ||||||||| ||||||| |||||||||||||||||| | |||||||||| Sbjct: 421 tcgccggcaatggcaaggagatctgggtgttcgacatcgacgagacctctctctccaacc 480 Query: 358 tcccctactacgcccaagcacggcttcggg 387 |||||||||||| ||||||||||||||||| Sbjct: 481 tcccctactacg-ccaagcacggcttcggg 509 Score = 69.9 bits (35), Expect = 7e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 59 cgaggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggc 113 |||||| |||||||||||| | || |||||||| ||||||||||||||||||||| Sbjct: 170 cgaggctgtggtggcgccgatcatacacgcgctacggccgctgctgggctccggc 224
>dbj|AK110669.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-169-F12, full insert sequence Length = 953 Score = 224 bits (113), Expect = 2e-55 Identities = 233/269 (86%), Gaps = 3/269 (1%) Strand = Plus / Plus Query: 119 cgccggagtggcgtgcgacagctgggtgctgggggtggaggcgcacaacgtgcgggactg 178 |||||| ||||| |||||||||||| |||||| |||||||||||||||||| ||||| Sbjct: 244 cgccggcgtggcctgcgacagctggaggctgggcgtggaggcgcacaacgtgatcgactg 303 Query: 179 gaagacggtgcccgc-gagctgcgagggctacgtcggccactacatgctcggcagccatt 237 || ||||||||| || ||| |||||||||||| |||||||||||||||| ||| || | Sbjct: 304 gaggacggtgccagccgag-tgcgagggctacatcggccactacatgctaggcgaacact 362 Query: 238 tccgccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagc 297 ||||||||||| | |||||| ||||| ||||| ||||||| | ||| ||||||||| Sbjct: 363 accgccgcgacttcgccgtcgtcgtcgacgaggccgtcgcctacgccgagaccctcaagc 422 Query: 298 tcgccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacc 357 |||||||||| ||||||||| ||||||| |||||||||||||||||| | |||||||||| Sbjct: 423 tcgccggcaatggcaaggagatctgggtgttcgacatcgacgagacctctctctccaacc 482 Query: 358 tcccctactacgcccaagcacggcttcgg 386 |||||||||||| |||||||||||||||| Sbjct: 483 tcccctactacg-ccaagcacggcttcgg 510 Score = 69.9 bits (35), Expect = 7e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 59 cgaggcggtggtggcgccgctgatccacgcgctgcggccgctgctgggctccggc 113 |||||| |||||||||||| | || |||||||| ||||||||||||||||||||| Sbjct: 172 cgaggctgtggtggcgccgatcatacacgcgctacggccgctgctgggctccggc 226
>gb|AY106317.1| Zea mays PCO101473 mRNA sequence Length = 827 Score = 137 bits (69), Expect = 3e-29 Identities = 160/189 (84%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 255 gtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcgccggcaacggcaag 314 |||||||||||| ||||| ||||||| | ||| ||||||||| | ||||||||||||| Sbjct: 27 gtcgtcatcgacgaggccatcgcctacgccgagggcctcaagctgggcggcaacggcaag 86 Query: 315 gaggtctgggtcttcgacatcgacgagaccaccctctccaacctcccctactacgcccaa 374 ||||||||||||||||| ||||||||||| |||||||||| ||||||||||| | ||| Sbjct: 87 gaggtctgggtcttcgatatcgacgagacgtccctctccaatctcccctactatg-ccac 145 Query: 375 gcacggcttcggggctacaccgttcaacgcgaccagcttcaacgcatacgtgctacaggg 434 ||||||||||| ||| | | ||||||||| |||||||||| |||||||| |||| Sbjct: 146 ccacggcttcggcactaagctatacaacgcgacgagcttcaacgagtacgtgctggaggg 205 Query: 435 gagcgcgcc 443 ||||||||| Sbjct: 206 gagcgcgcc 214
>gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10, complete sequence Length = 153366 Score = 97.6 bits (49), Expect = 3e-17 Identities = 106/125 (84%) Strand = Plus / Minus Query: 241 gccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcg 300 ||||||||||| | || |||||| || ||||| ||||||| | ||| |||||||||| Sbjct: 116642 gccgcgactccgatgtggtcatcaacaaggccatcgcctacgccgagagcctcaagctct 116583 Query: 301 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacctcc 360 ||||| | ||||||||| ||||||| ||||||||||||||||||||||||| || ||| | Sbjct: 116582 ccggccatggcaaggagatctgggtgttcgacatcgacgagaccaccctcttcaccctgc 116523 Query: 361 cctac 365 ||||| Sbjct: 116522 cctac 116518 Score = 75.8 bits (38), Expect = 1e-10 Identities = 95/114 (83%) Strand = Plus / Minus Query: 241 gccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcg 300 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 140247 gccgcgactccgacgtggtgatcaacgaggccgtcgcctacgccgagagcctcaagctct 140188 Query: 301 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctcca 354 |||||| ||||||||||||||||| |||||| ||||||||||| | ||||||| Sbjct: 140187 ccggcagtggcaaggaggtctgggtgttcgacgtcgacgagaccgcactctcca 140134 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 290 cctcaagctcgccggcaacggcaaggaggtctg 322 |||||||||| ||||||| |||||||||||||| Sbjct: 150980 cctcaagctctccggcaatggcaaggaggtctg 150948 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Minus Query: 176 ctggaagacggtgcccgcgagctgcgagggctacgtcg 213 ||||||||||||||| |||| ||||| |||||||||| Sbjct: 151098 ctggaagacggtgccggcgaactgcgctggctacgtcg 151061
>dbj|AK061489.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-B02, full insert sequence Length = 1100 Score = 75.8 bits (38), Expect = 1e-10 Identities = 95/114 (83%) Strand = Plus / Plus Query: 241 gccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcg 300 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 291 gccgcgactccgacgtggtgatcaacgaggccgtcgcctacgccgagagcctcaagctct 350 Query: 301 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctcca 354 |||||| ||||||||||||||||| |||||| ||||||||||| | ||||||| Sbjct: 351 ccggcagtggcaaggaggtctgggtgttcgacgtcgacgagaccgcactctcca 404
>gb|AC152973.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0076M01, complete sequence Length = 36050 Score = 75.8 bits (38), Expect = 1e-10 Identities = 95/114 (83%) Strand = Plus / Minus Query: 241 gccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcg 300 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 7904 gccgcgactccgacgtggtgatcaacgaggccgtcgcctacgccgagagcctcaagctct 7845 Query: 301 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctcca 354 |||||| ||||||||||||||||| |||||| ||||||||||| | ||||||| Sbjct: 7844 ccggcagtggcaaggaggtctgggtgttcgacgtcgacgagaccgcactctcca 7791 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 290 cctcaagctcgccggcaacggcaaggaggtctg 322 |||||||||| ||||||| |||||||||||||| Sbjct: 18637 cctcaagctctccggcaatggcaaggaggtctg 18605 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Minus Query: 176 ctggaagacggtgcccgcgagctgcgagggctacgtcg 213 ||||||||||||||| |||| ||||| |||||||||| Sbjct: 18755 ctggaagacggtgccggcgaactgcgctggctacgtcg 18718
>dbj|AK109335.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C11, full insert sequence Length = 1168 Score = 73.8 bits (37), Expect = 4e-10 Identities = 103/125 (82%) Strand = Plus / Plus Query: 241 gccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcg 300 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 315 gccgcgactccgacgtggtgatcaacgaggccatcgcctacgccgagagcctcaagctct 374 Query: 301 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacctcc 360 ||||| | ||||||||| ||||||| |||||| |||| |||||| ||||||||| ||| | Sbjct: 375 ccggccatggcaaggagatctgggtgttcgacgtcgatgagaccgccctctccaccctgc 434 Query: 361 cctac 365 ||||| Sbjct: 435 cctac 439
>dbj|AK104519.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D05, full insert sequence Length = 1081 Score = 73.8 bits (37), Expect = 4e-10 Identities = 103/125 (82%) Strand = Plus / Plus Query: 241 gccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcg 300 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 315 gccgcgactccgacgtggtgatcaacgaggccatcgcctacgccgagagcctcaagctct 374 Query: 301 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacctcc 360 ||||| | ||||||||| ||||||| |||||| |||| |||||| ||||||||| ||| | Sbjct: 375 ccggccatggcaaggagatctgggtgttcgacgtcgatgagaccgccctctccaccctgc 434 Query: 361 cctac 365 ||||| Sbjct: 435 cctac 439
>dbj|AK104460.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B10, full insert sequence Length = 1081 Score = 73.8 bits (37), Expect = 4e-10 Identities = 103/125 (82%) Strand = Plus / Plus Query: 241 gccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcg 300 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 315 gccgcgactccgacgtggtgatcaacgaggccatcgcctacgccgagagcctcaagctct 374 Query: 301 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacctcc 360 ||||| | ||||||||| ||||||| |||||| |||| |||||| ||||||||| ||| | Sbjct: 375 ccggccatggcaaggagatctgggtgttcgacgtcgatgagaccgccctctccaccctgc 434 Query: 361 cctac 365 ||||| Sbjct: 435 cctac 439
>dbj|AK104246.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-E04, full insert sequence Length = 1081 Score = 73.8 bits (37), Expect = 4e-10 Identities = 103/125 (82%) Strand = Plus / Plus Query: 241 gccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcg 300 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 315 gccgcgactccgacgtggtgatcaacgaggccatcgcctacgccgagagcctcaagctct 374 Query: 301 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacctcc 360 ||||| | ||||||||| ||||||| |||||| |||| |||||| ||||||||| ||| | Sbjct: 375 ccggccatggcaaggagatctgggtgttcgacgtcgatgagaccgccctctccaccctgc 434 Query: 361 cctac 365 ||||| Sbjct: 435 cctac 439
>dbj|AK060968.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C05, full insert sequence Length = 1096 Score = 73.8 bits (37), Expect = 4e-10 Identities = 103/125 (82%) Strand = Plus / Plus Query: 241 gccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcg 300 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 315 gccgcgactccgacgtggtgatcaacgaggccatcgcctacgccgagagcctcaagctct 374 Query: 301 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacctcc 360 ||||| | ||||||||| ||||||| |||||| |||| |||||| ||||||||| ||| | Sbjct: 375 ccggccatggcaaggagatctgggtgttcgacgtcgatgagaccgccctctccaccctgc 434 Query: 361 cctac 365 ||||| Sbjct: 435 cctac 439
>gb|AC152971.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0023G10, complete sequence Length = 36253 Score = 73.8 bits (37), Expect = 4e-10 Identities = 103/125 (82%) Strand = Plus / Minus Query: 241 gccgcgactccaaggtcgtcatcgaccaggccctcgcctatgtcgactccctcaagctcg 300 ||||||||||| | || || ||| || ||||| ||||||| | ||| |||||||||| Sbjct: 26144 gccgcgactccgacgtggtgatcaacgaggccatcgcctacgccgagagcctcaagctct 26085 Query: 301 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagaccaccctctccaacctcc 360 ||||| | ||||||||| ||||||| |||||| |||| |||||| ||||||||| ||| | Sbjct: 26084 ccggccatggcaaggagatctgggtgttcgacgtcgatgagaccgccctctccaccctgc 26025 Query: 361 cctac 365 ||||| Sbjct: 26024 cctac 26020
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 321 tgggtcttcgacatcgacgagaccaccctctccaacctcccctactacgcc 371 ||||| |||||| |||||||||| ||||||||||||||||||||||||| Sbjct: 2088139 tgggtgttcgacgtcgacgagacgctcctctccaacctcccctactacgcc 2088189
>dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0041F13 Length = 163230 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 321 tgggtcttcgacatcgacgagaccaccctctccaacctcccctactacgcc 371 ||||| |||||| |||||||||| ||||||||||||||||||||||||| Sbjct: 109001 tgggtgttcgacgtcgacgagacgctcctctccaacctcccctactacgcc 109051
>dbj|AK058604.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-A01, full insert sequence Length = 1313 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 321 tgggtcttcgacatcgacgagaccaccctctccaacctcccctactacgcc 371 ||||| |||||| |||||||||| ||||||||||||||||||||||||| Sbjct: 622 tgggtgttcgacgtcgacgagacgctcctctccaacctcccctactacgcc 672
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 67 tggtggcgccgctgatccacgcgctgcggccgc 99 ||||||||||||||||| ||||||||| ||||| Sbjct: 1077692 tggtggcgccgctgatcgacgcgctgctgccgc 1077724
>ref|XM_473513.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1290 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 348 ctctccaacctcccctactacgcc 371 |||||||||||||||||||||||| Sbjct: 31 ctctccaacctcccctactacgcc 54
>ref|NM_183670.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 195 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 348 ctctccaacctcccctactacgcc 371 |||||||||||||||||||||||| Sbjct: 31 ctctccaacctcccctactacgcc 54
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 348 ctctccaacctcccctactacgcc 371 |||||||||||||||||||||||| Sbjct: 28254146 ctctccaacctcccctactacgcc 28254169
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 348 ctctccaacctcccctactacgcc 371 |||||||||||||||||||||||| Sbjct: 10940680 ctctccaacctcccctactacgcc 10940657 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 320 ctgggtcttcgacatcgacgagaccaccctctcc 353 |||||| |||||| ||||||||||| |||||||| Sbjct: 4872197 ctgggtgttcgacgtcgacgagaccgccctctcc 4872164 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 294 aagctcgccggcaacggcaaggag 317 |||| ||||||||||||||||||| Sbjct: 25497807 aagcccgccggcaacggcaaggag 25497784 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 gccgacgtcggcggcggacg 54 |||||||||||||||||||| Sbjct: 9253184 gccgacgtcggcggcggacg 9253165 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 cgaggcggtggtggcgccgc 78 |||||||||||||||||||| Sbjct: 7627981 cgaggcggtggtggcgccgc 7628000
>dbj|AP003140.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0025P13 Length = 133242 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 348 ctctccaacctcccctactacgcc 371 |||||||||||||||||||||||| Sbjct: 127696 ctctccaacctcccctactacgcc 127673
>dbj|AP002883.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0487H02 Length = 145491 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Minus Query: 348 ctctccaacctcccctactacgcc 371 |||||||||||||||||||||||| Sbjct: 43522 ctctccaacctcccctactacgcc 43499
>emb|AL606628.3|OSJN00055 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0017B10, complete sequence Length = 150957 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 348 ctctccaacctcccctactacgcc 371 |||||||||||||||||||||||| Sbjct: 46454 ctctccaacctcccctactacgcc 46477
>ref|NM_119070.2| Arabidopsis thaliana acid phosphatase AT4G29260 mRNA, complete cds Length = 1096 Score = 46.1 bits (23), Expect = 0.098 Identities = 38/43 (88%) Strand = Plus / Plus Query: 301 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagac 343 ||||| |||||||||| || ||| ||||||| ||||||||||| Sbjct: 490 ccggcgacggcaaggacgtgtggatcttcgatatcgacgagac 532
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 46.1 bits (23), Expect = 0.098 Identities = 23/23 (100%) Strand = Plus / Minus Query: 63 gcggtggtggcgccgctgatcca 85 ||||||||||||||||||||||| Sbjct: 141389 gcggtggtggcgccgctgatcca 141367
>gb|BT015481.1| Arabidopsis thaliana At4g29260 mRNA sequence Length = 690 Score = 46.1 bits (23), Expect = 0.098 Identities = 38/43 (88%) Strand = Plus / Plus Query: 301 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagac 343 ||||| |||||||||| || ||| ||||||| ||||||||||| Sbjct: 218 ccggcgacggcaaggacgtgtggatcttcgatatcgacgagac 260
>gb|AY091175.1| Arabidopsis thaliana putative acid phosphatase (At4g29260) mRNA, complete cds Length = 799 Score = 46.1 bits (23), Expect = 0.098 Identities = 38/43 (88%) Strand = Plus / Plus Query: 301 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagac 343 ||||| |||||||||| || ||| ||||||| ||||||||||| Sbjct: 296 ccggcgacggcaaggacgtgtggatcttcgatatcgacgagac 338
>gb|AY050945.1| Arabidopsis thaliana putative acid phosphatase (At4g29260) mRNA, complete cds Length = 914 Score = 46.1 bits (23), Expect = 0.098 Identities = 38/43 (88%) Strand = Plus / Plus Query: 301 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagac 343 ||||| |||||||||| || ||| ||||||| ||||||||||| Sbjct: 307 ccggcgacggcaaggacgtgtggatcttcgatatcgacgagac 349
>emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 70 Length = 198429 Score = 46.1 bits (23), Expect = 0.098 Identities = 38/43 (88%) Strand = Plus / Minus Query: 301 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagac 343 ||||| |||||||||| || ||| ||||||| ||||||||||| Sbjct: 151194 ccggcgacggcaaggacgtgtggatcttcgatatcgacgagac 151152
>emb|BX828948.1|CNS0A3HO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL53ZD02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 895 Score = 46.1 bits (23), Expect = 0.098 Identities = 38/43 (88%) Strand = Plus / Plus Query: 301 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagac 343 ||||| |||||||||| || ||| ||||||| ||||||||||| Sbjct: 318 ccggcgacggcaaggacgtgtggatcttcgatatcgacgagac 360
>emb|BX828856.1|CNS0A3GL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL44ZF03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 843 Score = 46.1 bits (23), Expect = 0.098 Identities = 38/43 (88%) Strand = Plus / Plus Query: 301 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagac 343 ||||| |||||||||| || ||| ||||||| ||||||||||| Sbjct: 291 ccggcgacggcaaggacgtgtggatcttcgatatcgacgagac 333
>emb|BX828696.1|CNS0A2F9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL30ZA03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 815 Score = 46.1 bits (23), Expect = 0.098 Identities = 38/43 (88%) Strand = Plus / Plus Query: 301 ccggcaacggcaaggaggtctgggtcttcgacatcgacgagac 343 ||||| |||||||||| || ||| ||||||| ||||||||||| Sbjct: 264 ccggcgacggcaaggacgtgtggatcttcgatatcgacgagac 306
>ref|NM_189664.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 912 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 320 ctgggtcttcgacatcgacgagaccaccctctcc 353 |||||| |||||| ||||||||||| |||||||| Sbjct: 375 ctgggtgttcgacgtcgacgagaccgccctctcc 408
>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710E05 Length = 179714 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Minus Query: 320 ctgggtcttcgacatcgacgagaccaccctctcc 353 |||||| |||||| ||||||||||| |||||||| Sbjct: 116846 ctgggtgttcgacgtcgacgagaccgccctctcc 116813
>dbj|AK109404.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E06, full insert sequence Length = 1095 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 320 ctgggtcttcgacatcgacgagaccaccctctcc 353 |||||| |||||| ||||||||||| |||||||| Sbjct: 398 ctgggtgttcgacgtcgacgagaccgccctctcc 431
>dbj|AK104471.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D10, full insert sequence Length = 1094 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 320 ctgggtcttcgacatcgacgagaccaccctctcc 353 |||||| |||||| ||||||||||| |||||||| Sbjct: 397 ctgggtgttcgacgtcgacgagaccgccctctcc 430
>dbj|AK104183.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C11, full insert sequence Length = 1095 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 320 ctgggtcttcgacatcgacgagaccaccctctcc 353 |||||| |||||| ||||||||||| |||||||| Sbjct: 398 ctgggtgttcgacgtcgacgagaccgccctctcc 431
>dbj|AK100363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083N07, full insert sequence Length = 1308 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 320 ctgggtcttcgacatcgacgagaccaccctctcc 353 |||||| |||||| ||||||||||| |||||||| Sbjct: 611 ctgggtgttcgacgtcgacgagaccgccctctcc 644
>dbj|AK061466.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-C05, full insert sequence Length = 1095 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 320 ctgggtcttcgacatcgacgagaccaccctctcc 353 |||||| |||||| ||||||||||| |||||||| Sbjct: 398 ctgggtgttcgacgtcgacgagaccgccctctcc 431
>dbj|AK060964.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-B05, full insert sequence Length = 1114 Score = 44.1 bits (22), Expect = 0.39 Identities = 31/34 (91%) Strand = Plus / Plus Query: 320 ctgggtcttcgacatcgacgagaccaccctctcc 353 |||||| |||||| ||||||||||| |||||||| Sbjct: 398 ctgggtgttcgacgtcgacgagaccgccctctcc 431
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 89 gctgcggccgctgctgggctccggcaagca 118 |||||||||||||||||||| || |||||| Sbjct: 1858796 gctgcggccgctgctgggcttcgacaagca 1858825 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 35 gccgacgtcggcggcggacgtg 56 |||||||||||||||||||||| Sbjct: 90574 gccgacgtcggcggcggacgtg 90595
>ref|XM_475387.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 582 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 290 cctcaagctcgccggcaacggcaaggagg 318 ||||| |||||||||||||| |||||||| Sbjct: 486 cctcatgctcgccggcaacgtcaaggagg 514
>ref|XM_477962.1| Oryza sativa (japonica cultivar-group), mRNA Length = 501 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 62 ggcggtggtggcgccgctgatccacgcgc 90 |||||||| ||||||||||||| |||||| Sbjct: 57 ggcggtggcggcgccgctgatcgacgcgc 85
>gb|AC121361.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009E21, complete sequence Length = 153214 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 290 cctcaagctcgccggcaacggcaaggagg 318 ||||| |||||||||||||| |||||||| Sbjct: 64410 cctcatgctcgccggcaacgtcaaggagg 64382
>gb|AC108503.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1387_F08, complete sequence Length = 141535 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 290 cctcaagctcgccggcaacggcaaggagg 318 ||||| |||||||||||||| |||||||| Sbjct: 18768 cctcatgctcgccggcaacgtcaaggagg 18740
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 90 ctgcggccgctgctgggctccggca 114 |||||||||||||||||||| |||| Sbjct: 4476736 ctgcggccgctgctgggctcgggca 4476712
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 87 gcgctgcggccgctgctgggctccg 111 ||||||||||||||||||| ||||| Sbjct: 966839 gcgctgcggccgctgctggactccg 966815
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 62 ggcggtggtggcgccgctgatccacgcgc 90 |||||||| ||||||||||||| |||||| Sbjct: 15937457 ggcggtggcggcgccgctgatcgacgcgc 15937485 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 cctcaagctcgccggcaacg 309 |||||||||||||||||||| Sbjct: 20676288 cctcaagctcgccggcaacg 20676307
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 ccacgcgctgcggccgctgct 103 ||||||||||||||||||||| Sbjct: 7463181 ccacgcgctgcggccgctgct 7463201
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 gcggcggacgtggacgaggcg 65 ||||||||||||||||||||| Sbjct: 4785906 gcggcggacgtggacgaggcg 4785886 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 caacgcgaccagcttcaacg 418 |||||||||||||||||||| Sbjct: 768764 caacgcgaccagcttcaacg 768783
>dbj|AP005641.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0027N13 Length = 179669 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 62 ggcggtggtggcgccgctgatccacgcgc 90 |||||||| ||||||||||||| |||||| Sbjct: 176971 ggcggtggcggcgccgctgatcgacgcgc 176999
>dbj|AP005642.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0040K22 Length = 155832 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 62 ggcggtggtggcgccgctgatccacgcgc 90 |||||||| ||||||||||||| |||||| Sbjct: 18859 ggcggtggcggcgccgctgatcgacgcgc 18887
>dbj|AK112061.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-G08, full insert sequence Length = 903 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 62 ggcggtggtggcgccgctgatccacgcgc 90 |||||||| ||||||||||||| |||||| Sbjct: 123 ggcggtggcggcgccgctgatcgacgcgc 151
>dbj|AK070343.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052E24, full insert sequence Length = 1097 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 290 cctcaagctcgccggcaacggcaaggagg 318 ||||| |||||||||||||| |||||||| Sbjct: 601 cctcatgctcgccggcaacgtcaaggagg 629
>ref|XM_508594.1| PREDICTED: Pan troglodytes similar to KIAA1394 protein (LOC451368), mRNA Length = 4191 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 57 gacgaggcggtggtggcgccgctg 80 ||||||||||||| |||||||||| Sbjct: 1987 gacgaggcggtggcggcgccgctg 2010
>ref|NM_188032.1| Oryza sativa (japonica cultivar-group), Ozsa8452 predicted mRNA Length = 1767 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 gccgacgtcggcggcggacg 54 |||||||||||||||||||| Sbjct: 1617 gccgacgtcggcggcggacg 1636
>ref|NM_188686.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 369 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 cgaggcggtggtggcgccgc 78 |||||||||||||||||||| Sbjct: 304 cgaggcggtggtggcgccgc 285
>ref|XM_482470.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1806 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 43 cggcggcggacgtggacgaggcggtggtggcg 74 |||||| ||||||||||| |||||||| |||| Sbjct: 275 cggcggaggacgtggacgcggcggtggcggcg 306
>ref|XM_469899.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3159 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 cgtcggcggcggacgtggac 59 |||||||||||||||||||| Sbjct: 395 cgtcggcggcggacgtggac 414
>ref|NM_196414.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0060A14.4), mRNA Length = 537 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 cggcggcggacgtggacgaggcgg 66 ||||||||| |||||||||||||| Sbjct: 86 cggcggcggtcgtggacgaggcgg 109
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 ccgctgatccacgcgctgcggccg 98 ||||||||||||||||||| |||| Sbjct: 106983 ccgctgatccacgcgctgccgccg 107006
>ref|NM_174413.2| Bos taurus proprotein convertase subtilisin/kexin type 2 (PCSK2), mRNA Length = 2092 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ggactggaagacggtgcccg 192 |||||||||||||||||||| Sbjct: 1459 ggactggaagacggtgcccg 1478
>ref|XM_478514.1| Oryza sativa (japonica cultivar-group), mRNA Length = 930 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 cctcaagctcgccggcaacg 309 |||||||||||||||||||| Sbjct: 264 cctcaagctcgccggcaacg 283
>ref|XM_478515.1| Oryza sativa (japonica cultivar-group), mRNA Length = 657 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 cctcaagctcgccggcaacg 309 |||||||||||||||||||| Sbjct: 356 cctcaagctcgccggcaacg 375
>gb|AY492273.1| Corynebacterium vitaeruminis strain CIP 827 RpoB (rpoB) gene, partial cds Length = 3296 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 gcacgccggagtggcgtgcg 135 |||||||||||||||||||| Sbjct: 127 gcacgccggagtggcgtgcg 146
>gb|AC102751.14| Mus musculus chromosome 19, clone RP24-531N3, complete sequence Length = 178150 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 gcaaggaggtctgggtcttc 329 |||||||||||||||||||| Sbjct: 4652 gcaaggaggtctgggtcttc 4633
>gb|AY658948.1| Synthetic construct Peudomonas aeruginosa clone FLH046900.01F PA1060 gene, partial cds Length = 906 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 cacgcgctgcggccgctgctgggc 107 ||||||| |||||||||||||||| Sbjct: 439 cacgcgccgcggccgctgctgggc 462
>gb|AC122548.10| Mus musculus chromosome 19, clone RP23-273O15, complete sequence Length = 189169 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 gcaaggaggtctgggtcttc 329 |||||||||||||||||||| Sbjct: 182845 gcaaggaggtctgggtcttc 182826
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 cgtcggcggcggacgtggac 59 |||||||||||||||||||| Sbjct: 31415004 cgtcggcggcggacgtggac 31415023
>ref|XM_756140.1| Ustilago maydis 521 hypothetical protein (UM05086.1) partial mRNA Length = 5505 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 ggcggtggtggcgccgctga 81 |||||||||||||||||||| Sbjct: 2532 ggcggtggtggcgccgctga 2513
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 296 gctcgccggcaacggcaagg 315 |||||||||||||||||||| Sbjct: 2526359 gctcgccggcaacggcaagg 2526378
>gb|AC146340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0044A10, from chromosome 10, complete sequence Length = 173374 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 cggcggcggacgtggacgaggcgg 66 ||||||||| |||||||||||||| Sbjct: 171752 cggcggcggtcgtggacgaggcgg 171775
>gb|AC099043.6| Oryza sativa chromosome 3 BAC OSJNBa0079B15 genomic sequence, complete sequence Length = 159091 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 cgtcggcggcggacgtggac 59 |||||||||||||||||||| Sbjct: 80796 cgtcggcggcggacgtggac 80777
>gb|AC090487.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0044I14, from Chromosome 10, complete sequence Length = 63167 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 43 cggcggcggacgtggacgaggcgg 66 ||||||||| |||||||||||||| Sbjct: 4790 cggcggcggtcgtggacgaggcgg 4767
>emb|BX908809.1| Neurospora crassa DNA linkage group IV Cosmid contig 29E8 Length = 197698 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 ggacgtggacgaggcggtggtggc 73 |||||||| ||||||||||||||| Sbjct: 4142 ggacgtggtcgaggcggtggtggc 4119
>emb|BX294134.1| Pirellula sp. strain 1 complete genome; segment 2/24 Length = 304450 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cggcagccatttccgccgcg 246 |||||||||||||||||||| Sbjct: 13266 cggcagccatttccgccgcg 13285
>gb|AY129337.1| Mycobacteriophage Bxz1, complete genome Length = 156102 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 actccaaggtcgtcatcgac 266 |||||||||||||||||||| Sbjct: 68883 actccaaggtcgtcatcgac 68902
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 255 gtcgtcatcgaccaggccctcgcc 278 |||||||||||| ||||||||||| Sbjct: 195232 gtcgtcatcgacaaggccctcgcc 195255
>dbj|AK127616.1| Homo sapiens cDNA FLJ45714 fis, clone FEKID2002637, highly similar to Serine/threonine protein phosphatase PP1-alpha 1 catalytic subunit (EC 3.1.3.16) Length = 1685 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 57 gacgaggcggtggtggcgccgctg 80 ||||||||||||| |||||||||| Sbjct: 111 gacgaggcggtggcggcgccgctg 88
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 88 cgctgcggccgctgctgggc 107 |||||||||||||||||||| Sbjct: 1724968 cgctgcggccgctgctgggc 1724987 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 catgccgacgtcggcggcgg 51 |||||||||||||||||||| Sbjct: 27426 catgccgacgtcggcggcgg 27407
>ref|XM_941962.1| PREDICTED: Homo sapiens KIAA1394 protein, transcript variant 3 (KIAA1394), mRNA Length = 5056 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 57 gacgaggcggtggtggcgccgctg 80 ||||||||||||| |||||||||| Sbjct: 2682 gacgaggcggtggcggcgccgctg 2705
>ref|XM_208522.5| PREDICTED: Homo sapiens KIAA1394 protein, transcript variant 1 (KIAA1394), mRNA Length = 5055 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 57 gacgaggcggtggtggcgccgctg 80 ||||||||||||| |||||||||| Sbjct: 2682 gacgaggcggtggcggcgccgctg 2705
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 ggacgaggcggtggtggcgc 75 |||||||||||||||||||| Sbjct: 125683 ggacgaggcggtggtggcgc 125664
>gb|AC021893.18|AC021893 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060A14, from chromosome 10, complete sequence Length = 151343 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 cggcggcggacgtggacgaggcgg 66 ||||||||| |||||||||||||| Sbjct: 17880 cggcggcggtcgtggacgaggcgg 17903
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 64 cggtggtggcgccgctgatccacg 87 ||||||||||| |||||||||||| Sbjct: 429845 cggtggtggcggcgctgatccacg 429822
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 cggcggcggacgtggacgaggcgg 66 |||||||||||||||||| ||||| Sbjct: 66182 cggcggcggacgtggacgcggcgg 66205
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 cggcggcggacgtggacgaggcgg 66 ||||||||| |||||||||||||| Sbjct: 13325503 cggcggcggtcgtggacgaggcgg 13325526
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 43 cggcggcggacgtggacgaggcggtggtggcg 74 |||||| ||||||||||| |||||||| |||| Sbjct: 20372954 cggcggaggacgtggacgcggcggtggcggcg 20372985
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 cgtcggcggcggacgtggac 59 |||||||||||||||||||| Sbjct: 31505520 cgtcggcggcggacgtggac 31505539
>gb|AF186406.1|AF186406 Bos taurus prohormone convertase 2 (PC2) mRNA, complete cds Length = 2092 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ggactggaagacggtgcccg 192 |||||||||||||||||||| Sbjct: 1459 ggactggaagacggtgcccg 1478
>gb|AE004950.1| Pseudomonas aeruginosa PAO1, section 511 of 529 of the complete genome Length = 11213 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 cgcgctgcggccgctgctgg 105 |||||||||||||||||||| Sbjct: 5973 cgcgctgcggccgctgctgg 5954
>gb|AE004505.1| Pseudomonas aeruginosa PAO1, section 66 of 529 of the complete genome Length = 11421 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 gccgctgatccacgcgctgc 93 |||||||||||||||||||| Sbjct: 511 gccgctgatccacgcgctgc 530
>dbj|AP002855.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0086P08 Length = 145312 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 cgaggcggtggtggcgccgc 78 |||||||||||||||||||| Sbjct: 38557 cgaggcggtggtggcgccgc 38576
>dbj|AP001073.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0667A10 Length = 152237 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 gccgacgtcggcggcggacg 54 |||||||||||||||||||| Sbjct: 29778 gccgacgtcggcggcggacg 29759
>dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0011D01 Length = 168655 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 35 gccgacgtcggcggcggacg 54 |||||||||||||||||||| Sbjct: 153566 gccgacgtcggcggcggacg 153547
>dbj|AP004367.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696E01 Length = 194056 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 294 aagctcgccggcaacggcaaggag 317 |||| ||||||||||||||||||| Sbjct: 25410 aagcccgccggcaacggcaaggag 25387
>dbj|AP005537.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056L09 Length = 152910 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 43 cggcggcggacgtggacgaggcggtggtggcg 74 |||||| ||||||||||| |||||||| |||| Sbjct: 120702 cggcggaggacgtggacgcggcggtggcggcg 120733
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 cctcaagctcgccggcaacg 309 |||||||||||||||||||| Sbjct: 29038 cctcaagctcgccggcaacg 29057
>emb|X87247.1|PVULSGENE Pseudorabies virus UL21, UL20 & UL19 genes Length = 3797 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 cggcggcggacgtggacgaggcgg 66 |||||||||||||||||| ||||| Sbjct: 2450 cggcggcggacgtggacgcggcgg 2473
>dbj|AP004463.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0456B03 Length = 152973 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 43 cggcggcggacgtggacgaggcggtggtggcg 74 |||||| ||||||||||| |||||||| |||| Sbjct: 3584 cggcggaggacgtggacgcggcggtggcggcg 3615
>dbj|AK111340.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-F07, full insert sequence Length = 658 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 cctcaagctcgccggcaacg 309 |||||||||||||||||||| Sbjct: 356 cctcaagctcgccggcaacg 375
>dbj|AK109991.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-159-E07, full insert sequence Length = 3419 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 ggacgaggcggtggtggcgc 75 |||||||||||||||||||| Sbjct: 2514 ggacgaggcggtggtggcgc 2533
>dbj|AK073731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064P12, full insert sequence Length = 1707 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 cctcaagctcgccggcaacg 309 |||||||||||||||||||| Sbjct: 359 cctcaagctcgccggcaacg 378
>dbj|AK071221.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088C02, full insert sequence Length = 1807 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 43 cggcggcggacgtggacgaggcggtggtggcg 74 |||||| ||||||||||| |||||||| |||| Sbjct: 275 cggcggaggacgtggacgcggcggtggcggcg 306
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 caagctcgccggcaacggca 312 |||||||||||||||||||| Sbjct: 316528 caagctcgccggcaacggca 316547
>dbj|AP003419.3| Homo sapiens genomic DNA, chromosome 11 clone:CTC-1337H24, complete sequence Length = 168565 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 57 gacgaggcggtggtggcgccgctg 80 ||||||||||||| |||||||||| Sbjct: 101538 gacgaggcggtggcggcgccgctg 101561
>dbj|AB096083.1| Oryza sativa (japonica cultivar-group) BADH2 mRNA for betaine aldehyde dehydrogenase, complete cds Length = 1512 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 43 cggcggcggacgtggacgaggcggtggtggcg 74 |||||| ||||||||||| |||||||| |||| Sbjct: 128 cggcggaggacgtggacgcggcggtggcggcg 159
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 cggcggcggacgtggacgaggcgg 66 ||||||||| |||||||||||||| Sbjct: 13332843 cggcggcggtcgtggacgaggcgg 13332866
>emb|AL844164.17| Mouse DNA sequence from clone RP23-300I3 on chromosome 4, complete sequence Length = 209214 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 cagctgggtgctgggggtgg 156 |||||||||||||||||||| Sbjct: 36203 cagctgggtgctgggggtgg 36184
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 ggacgtggacgaggcggtggtggc 73 |||||||| ||||||||||||||| Sbjct: 1558061 ggacgtggccgaggcggtggtggc 1558084
>gb|L37531.1|STMPGLYZ Streptomyces coelicolor bacteriophage (phiC31) resistance (pglY and pglZ) genes, complete cds's Length = 9461 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 255 gtcgtcatcgaccaggccctcgcc 278 |||||||||||| ||||||||||| Sbjct: 2919 gtcgtcatcgacaaggccctcgcc 2942
>gb|L00676.1|SH1ULGNS Pseudorabies virus (Suid herpesvirus 1) UL18 through UL21 genes, complete cds and UL15 gene, 3' end Length = 9382 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 43 cggcggcggacgtggacgaggcgg 66 |||||||||||||||||| ||||| Sbjct: 2450 cggcggcggacgtggacgcggcgg 2473
>gb|M95285.1|SH1UL2XA Suid herpesvirus 1 genes homologous to HSV1 UL20 and UL21 genes, complete cds; and major capsid protein gene, 3' end Length = 2510 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 43 cggcggcggacgtggacgaggcgg 66 |||||||||||||||||| ||||| Sbjct: 730 cggcggcggacgtggacgcggcgg 707
>dbj|AB037815.1| Homo sapiens mRNA for KIAA1394 protein, partial cds Length = 5065 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 57 gacgaggcggtggtggcgccgctg 80 ||||||||||||| |||||||||| Sbjct: 2688 gacgaggcggtggcggcgccgctg 2711 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,528,684 Number of Sequences: 3902068 Number of extensions: 2528684 Number of successful extensions: 64304 Number of sequences better than 10.0: 120 Number of HSP's better than 10.0 without gapping: 125 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 61681 Number of HSP's gapped (non-prelim): 2597 length of query: 451 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 429 effective length of database: 17,147,199,772 effective search space: 7356148702188 effective search space used: 7356148702188 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
