ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart54e06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
2dbj|AP003022.2| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
3ref|NM_187408.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.008
4gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome... 50 0.008
5dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
7gb|AC138624.4| Mus musculus BAC clone RP23-187N1 from chromosome... 50 0.008
8dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
9dbj|AK108574.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.008
10dbj|AK106485.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.008
11ref|NM_194777.1| Oryza sativa (japonica cultivar-group) unknown ... 44 0.49
12ref|NM_194770.1| Oryza sativa (japonica cultivar-group) hypothet... 44 0.49
13ref|XM_464832.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.49
14ref|NM_187420.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.49
15gb|AC136224.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.49
16gb|AC087546.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.49
17gb|AY131228.1| Streptomyces tenebrarius H6 AprG1 (aprg1), AprG2 ... 44 0.49
18gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.49
19gb|AC074283.3| Oryza sativa chromosome 10 clone OSJNBa0087H07, c... 44 0.49
20gb|AC099733.2| Oryza sativa chromosome 10 clone OSJNAa0087H07, c... 44 0.49
21dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.49
22dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.49
23dbj|AP005511.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.49
24dbj|AP004018.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.49
25dbj|AK119430.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.49
26dbj|AK106351.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.49
27dbj|AK106350.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.49
28dbj|AK069758.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.49
29gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 44 0.49
30gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.49
31ref|NM_193928.1| Oryza sativa (japonica cultivar-group), predic... 42 2.0
32ref|XM_479042.1| Oryza sativa (japonica cultivar-group), mRNA 42 2.0
33ref|XM_953847.1| Neurospora crassa OR74A hypothetical protein (N... 42 2.0
34ref|XM_330350.1| Neurospora crassa OR74A hypothetical protein (N... 42 2.0
35ref|XM_505730.1| Yarrowia lipolytica CLIB122, YALI0F21967g predi... 42 2.0
36gb|AC145332.48| Felis catus clone rp86-207p24, complete sequence 42 2.0
37dbj|AP003536.4| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
38gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 2.0
39dbj|AP003853.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
40dbj|AP003840.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
41dbj|AK105518.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.0
42emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 42 2.0
43gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 2.0
44emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 42 2.0
45ref|NM_184255.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.7
46ref|XM_468406.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.7
47gb|AC134928.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.7
48gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.7
49ref|XM_427106.1| PREDICTED: Gallus gallus similar to HMG-box tra... 40 7.7
50gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 7.7
51ref|XM_531634.2| PREDICTED: Canis familiaris similar to citrate ... 40 7.7
52gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 7.7
53emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 7.7
54gb|AY131229.2| Streptomyces sp. 139 exopolysaccharide gene clust... 40 7.7
55gb|AF432980.1| Otoglossum globuliferum 18S ribosomal RNA gene, p... 40 7.7
56gb|AC009116.8| Homo sapiens chromosome 16 clone RP11-477D3, comp... 40 7.7
57gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 7.7
58gb|AE006470.1| Chlorobium tepidum TLS, complete genome 40 7.7
59dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
60dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
61dbj|AB197131.1| Gallus gallus sox17 mRNA for HMG transcription f... 40 7.7
62gb|AC116667.2| Homo sapiens chromosome 16 clone RP11-346C20, com... 40 7.7
63ref|NM_001039326.1| Gallus gallus HMG transcription factor SOX17... 40 7.7
64dbj|AP004137.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
65dbj|AP002526.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
66dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 7.7
67dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 7.7
68dbj|AP003214.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
69dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
70dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
71dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
72dbj|AP004059.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
73dbj|AP004053.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
74dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
75gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 7.7
76dbj|AK066689.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.7
77emb|CR450802.8| Zebrafish DNA sequence from clone CH211-197I12 i... 40 7.7
78gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 7.7
79dbj|D13457.1|STMCHO Streptomyces sp. genes for hypothetic proteins 40 7.7 
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                            
Query: 201      ccttccgccgccgcttccgcgagctgcacccgcagccgctcctgggcatcttcttcgacc 260
                ||||||||||||||||||| || || ||||||| ||| ||||| ||| |||||| |||||
Sbjct: 23797209 ccttccgccgccgcttccgggacctccacccgccgcccctcctcggcgtcttctgcgacc 23797268

                 
Query: 261      c 261
                |
Sbjct: 23797269 c 23797269



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 190      ctcgacccccgccttccgccgccgcttcc 218
                |||| |||||||||||| |||||||||||
Sbjct: 15949325 ctcgtcccccgccttcctccgccgcttcc 15949297



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 84      ccggcctcggcggcgacctc 103
               ||||||||||||||||||||
Sbjct: 1780802 ccggcctcggcggcgacctc 1780821
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>dbj|AP003022.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0681B11
          Length = 144091

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                         
Query: 201   ccttccgccgccgcttccgcgagctgcacccgcagccgctcctgggcatcttcttcgacc 260
             ||||||||||||||||||| || || ||||||| ||| ||||| ||| |||||| |||||
Sbjct: 77794 ccttccgccgccgcttccgggacctccacccgccgcccctcctcggcgtcttctgcgacc 77853

              
Query: 261   c 261
             |
Sbjct: 77854 c 77854
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>ref|NM_187408.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1341

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 323 gccgccgtccggcgcggcgacttcttcctcacc 355
           |||||||||||  ||||||||||||||||||||
Sbjct: 343 gccgccgtccgcggcggcgacttcttcctcacc 375
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>gb|AC148814.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J22,
              complete sequence
          Length = 173903

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                       
Query: 89     ctcggcggcgacctcctccgcgagatattcctcctcctccc 129
              ||||||| ||||||||||||||||||  |||||| ||||||
Sbjct: 127063 ctcggcgacgacctcctccgcgagatcctcctccgcctccc 127023
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                 
Query: 323      gccgccgtccggcgcggcgacttcttcctcacc 355
                |||||||||||  ||||||||||||||||||||
Sbjct: 19935607 gccgccgtccgtggcggcgacttcttcctcacc 19935575



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                 
Query: 323      gccgccgtccggcgcggcgacttcttcctcacc 355
                |||||||||||  ||||||||||||||||||||
Sbjct: 19935552 gccgccgtccgtggcggcgacttcttcctcacc 19935520



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                 
Query: 323      gccgccgtccggcgcggcgacttcttcctcacc 355
                |||||||||||  ||||||||||||||||||||
Sbjct: 19912432 gccgccgtccgcggcggcgacttcttcctcacc 19912464



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 323      gccgccgtccggcgcggcgacttcttcctc 352
                |||||||||||  |||||||||||||||||
Sbjct: 19949895 gccgccgtccgcggcggcgacttcttcctc 19949866



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 89       ctcggcggcgacctcctccgcgagatattcctcctcctccc 129
                ||||||| |||  |||||||||||||| |||||| ||||||
Sbjct: 24446499 ctcggcgacgaaatcctccgcgagatactcctccccctccc 24446539
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                        
Query: 89      ctcggcggcgacctcctccgcgagatattcctcctcctccc 129
               ||||||| ||||||||||||||||||  |||||| ||||||
Sbjct: 2680543 ctcggcgacgacctcctccgcgagatcctcctccgcctccc 2680503



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 196      ccccgccttccgccgccgcttccgcg 221
                ||||||||||| ||||||||||||||
Sbjct: 14736104 ccccgccttccaccgccgcttccgcg 14736079



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 199      cgccttccgccgccgcttccgcga 222
                |||| |||||||||||||||||||
Sbjct: 16154432 cgccgtccgccgccgcttccgcga 16154455
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>gb|AC138624.4| Mus musculus BAC clone RP23-187N1 from chromosome 7, complete sequence
          Length = 226264

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 116   ttcctcctcctcccgtcgctgccgagcct 144
             ||||||||||||||||||| |||||||||
Sbjct: 94353 ttcctcctcctcccgtcgccgccgagcct 94381
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>dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0036M16
          Length = 158880

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                               
Query: 323    gccgccgtccggcgcggcgacttcttcctcacc 355
              |||||||||||  ||||||||||||||||||||
Sbjct: 100257 gccgccgtccgtggcggcgacttcttcctcacc 100225



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                               
Query: 323    gccgccgtccggcgcggcgacttcttcctcacc 355
              |||||||||||  ||||||||||||||||||||
Sbjct: 100202 gccgccgtccgtggcggcgacttcttcctcacc 100170



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 323   gccgccgtccggcgcggcgacttcttcctcacc 355
             |||||||||||  ||||||||||||||||||||
Sbjct: 77082 gccgccgtccgcggcggcgacttcttcctcacc 77114



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 323    gccgccgtccggcgcggcgacttcttcctc 352
              |||||||||||  |||||||||||||||||
Sbjct: 114545 gccgccgtccgcggcggcgacttcttcctc 114516
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>dbj|AK108574.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-F09, full
           insert sequence
          Length = 1404

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 323 gccgccgtccggcgcggcgacttcttcctcacc 355
           |||||||||||  ||||||||||||||||||||
Sbjct: 390 gccgccgtccgtggcggcgacttcttcctcacc 422



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 323 gccgccgtccggcgcggcgacttcttcctcacc 355
           |||||||||||  ||||||||||||||||||||
Sbjct: 335 gccgccgtccgtggcggcgacttcttcctcacc 367
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>dbj|AK106485.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-H02, full
           insert sequence
          Length = 1361

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 89  ctcggcggcgacctcctccgcgagatattcctcctcctccc 129
           ||||||| ||||||||||||||||||  |||||| ||||||
Sbjct: 128 ctcggcgacgacctcctccgcgagatcctcctccgcctccc 168
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>ref|NM_194777.1| Oryza sativa (japonica cultivar-group) unknown protein
           (OSJNBa0087H07.14), mRNA
          Length = 1161

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 196 ccccgccttccgccgccgcttccgcg 221
           ||||||||||| ||||||||||||||
Sbjct: 165 ccccgccttccaccgccgcttccgcg 190
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>ref|NM_194770.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0087H07.7), mRNA
          Length = 2286

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 196 ccccgccttccgccgccgcttccgcg 221
           ||||||||||| ||||||||||||||
Sbjct: 183 ccccgccttcctccgccgcttccgcg 208
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>ref|XM_464832.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1403

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 196 ccccgccttccgccgccgcttccgcg 221
           ||||||||||| ||||||||||||||
Sbjct: 198 ccccgccttcctccgccgcttccgcg 223
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>ref|NM_187420.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 660

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 323 gccgccgtccggcgcggcgacttcttcctc 352
           |||||||||||  |||||||||||||||||
Sbjct: 7   gccgccgtccgcggcggcgacttcttcctc 36
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>gb|AC136224.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0006B22, complete sequence
          Length = 166052

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 196   ccccgccttccgccgccgcttccgcg 221
             ||||||||||| ||||||||||||||
Sbjct: 71518 ccccgccttccaccgccgcttccgcg 71493
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>gb|AC087546.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0012D19,
             complete sequence
          Length = 153276

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 89    ctcggcggcgacctcctccgcgagat 114
             ||||||| ||||||||||||||||||
Sbjct: 89499 ctcggcgacgacctcctccgcgagat 89524
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>gb|AY131228.1| Streptomyces tenebrarius H6 AprG1 (aprg1), AprG2 (aprg2), and AprM
            (aprm) genes, complete cds
          Length = 3764

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 330  tccggcgcggcgacttcttcct 351
            ||||||||||||||||||||||
Sbjct: 1657 tccggcgcggcgacttcttcct 1678
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>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
               Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 196     ccccgccttccgccgccgcttccgcg 221
               ||||||||||| ||||||||||||||
Sbjct: 2279416 ccccgccttccaccgccgcttccgcg 2279391



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 196     ccccgccttccgccgccgcttccgcg 221
               ||||||||||| ||||||||||||||
Sbjct: 2224715 ccccgccttcctccgccgcttccgcg 2224690



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 196     ccccgccttccgccgccgcttccgc 220
               ||||||||||| |||||||||||||
Sbjct: 2271877 ccccgccttccaccgccgcttccgc 2271853
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>gb|AC074283.3| Oryza sativa chromosome 10 clone OSJNBa0087H07, complete sequence
          Length = 156654

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 196    ccccgccttccgccgccgcttccgcg 221
              ||||||||||| ||||||||||||||
Sbjct: 105070 ccccgccttccaccgccgcttccgcg 105045



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 196   ccccgccttccgccgccgcttccgcg 221
             ||||||||||| ||||||||||||||
Sbjct: 50369 ccccgccttcctccgccgcttccgcg 50344



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 196   ccccgccttccgccgccgcttccgc 220
             ||||||||||| |||||||||||||
Sbjct: 97531 ccccgccttccaccgccgcttccgc 97507
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>gb|AC099733.2| Oryza sativa chromosome 10 clone OSJNAa0087H07, complete sequence
          Length = 132268

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 196  ccccgccttccgccgccgcttccgcg 221
            ||||||||||| ||||||||||||||
Sbjct: 8416 ccccgccttccaccgccgcttccgcg 8391



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 196 ccccgccttccgccgccgcttccgc 220
           ||||||||||| |||||||||||||
Sbjct: 877 ccccgccttccaccgccgcttccgc 853
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 89       ctcggcggcgacctcctccgcgagat 114
                ||||||| ||||||||||||||||||
Sbjct: 15030880 ctcggcgacgacctcctccgcgagat 15030905



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 196     ccccgccttccgccgccgcttccgcg 221
               ||||||||||| ||||||||||||||
Sbjct: 2279416 ccccgccttccaccgccgcttccgcg 2279391



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 196     ccccgccttccgccgccgcttccgcg 221
               ||||||||||| ||||||||||||||
Sbjct: 2224715 ccccgccttcctccgccgcttccgcg 2224690



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 196     ccccgccttccgccgccgcttccgc 220
               ||||||||||| |||||||||||||
Sbjct: 2271877 ccccgccttccaccgccgcttccgc 2271853
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 196     ccccgccttccgccgccgcttccgcg 221
               ||||||||||| ||||||||||||||
Sbjct: 8454838 ccccgccttcctccgccgcttccgcg 8454813



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 286      cgcgcccttccgccgccggg 305
                ||||||||||||||||||||
Sbjct: 35071632 cgcgcccttccgccgccggg 35071613



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 5        ttgcagcggcggcggctccc 24
                ||||||||||||||||||||
Sbjct: 24726455 ttgcagcggcggcggctccc 24726474
to top
>dbj|AP005511.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0011N12
          Length = 158586

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 196    ccccgccttccgccgccgcttccgcg 221
              ||||||||||| ||||||||||||||
Sbjct: 107688 ccccgccttcctccgccgcttccgcg 107663
to top
>dbj|AP004018.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1113_G05
          Length = 131445

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 196  ccccgccttccgccgccgcttccgcg 221
            ||||||||||| ||||||||||||||
Sbjct: 4108 ccccgccttcctccgccgcttccgcg 4083
to top
>dbj|AK119430.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-133-A03, full
           insert sequence
          Length = 2800

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 196 ccccgccttccgccgccgcttccgcg 221
           ||||||||||| ||||||||||||||
Sbjct: 311 ccccgccttccaccgccgcttccgcg 336
to top
>dbj|AK106351.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-H11, full
           insert sequence
          Length = 1723

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 196 ccccgccttccgccgccgcttccgcg 221
           ||||||||||| ||||||||||||||
Sbjct: 268 ccccgccttcctccgccgcttccgcg 293
to top
>dbj|AK106350.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-H10, full
           insert sequence
          Length = 1403

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 196 ccccgccttccgccgccgcttccgcg 221
           ||||||||||| ||||||||||||||
Sbjct: 198 ccccgccttcctccgccgcttccgcg 223
to top
>dbj|AK069758.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023033H12, full
           insert sequence
          Length = 1556

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 196 ccccgccttccgccgccgcttccgcg 221
           ||||||||||| ||||||||||||||
Sbjct: 195 ccccgccttcctccgccgcttccgcg 220
to top
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 322     ggccgccgtccggcgcggcgac 343
               ||||||||||||||||||||||
Sbjct: 3551277 ggccgccgtccggcgcggcgac 3551256
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 89       ctcggcggcgacctcctccgcgagat 114
                ||||||| ||||||||||||||||||
Sbjct: 15039121 ctcggcgacgacctcctccgcgagat 15039146



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 196     ccccgccttccgccgccgcttccgcg 221
               ||||||||||| ||||||||||||||
Sbjct: 2279367 ccccgccttccaccgccgcttccgcg 2279342



 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 196     ccccgccttccgccgccgcttccgcg 221
               ||||||||||| ||||||||||||||
Sbjct: 2224666 ccccgccttcctccgccgcttccgcg 2224641



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 196     ccccgccttccgccgccgcttccgc 220
               ||||||||||| |||||||||||||
Sbjct: 2271828 ccccgccttccaccgccgcttccgc 2271804
to top
>ref|NM_193928.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1281

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 190 ctcgacccccgccttccgccgccgcttcc 218
           |||| |||||||||||| |||||||||||
Sbjct: 174 ctcgtcccccgccttcctccgccgcttcc 202
to top
>ref|XM_479042.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 909

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 89  ctcggcggcgacctcctccgcgagatattcctcctcctccc 129
           ||||||| |||  |||||||||||||| |||||| ||||||
Sbjct: 293 ctcggcgacgaaatcctccgcgagatactcctccccctccc 253
to top
>ref|XM_953847.1| Neurospora crassa OR74A hypothetical protein (NCU09701.1) partial
            mRNA
          Length = 2754

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 485  gatctcctgccgccgctgccg 505
            |||||||||||||||||||||
Sbjct: 1333 gatctcctgccgccgctgccg 1313
to top
>ref|XM_330350.1| Neurospora crassa OR74A hypothetical protein (NCU09701.1) partial
            mRNA
          Length = 2754

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 485  gatctcctgccgccgctgccg 505
            |||||||||||||||||||||
Sbjct: 1333 gatctcctgccgccgctgccg 1313
to top
>ref|XM_505730.1| Yarrowia lipolytica CLIB122, YALI0F21967g predicted mRNA
          Length = 3702

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 112  gatattcctcctcctcccgtcgctg 136
            ||||||||||||||||||| |||||
Sbjct: 1075 gatattcctcctcctcccgacgctg 1099
to top
>gb|AC145332.48| Felis catus clone rp86-207p24, complete sequence
          Length = 165072

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 52    gccgccgtcggatcccgcccc 72
             |||||||||||||||||||||
Sbjct: 55041 gccgccgtcggatcccgcccc 55021
to top
>dbj|AP003536.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1096D03
          Length = 184422

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 190    ctcgacccccgccttccgccgccgcttcc 218
              |||| |||||||||||| |||||||||||
Sbjct: 176994 ctcgtcccccgccttcctccgccgcttcc 176966
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 84      ccggcctcggcggcgacctcc 104
               |||||||||||||||||||||
Sbjct: 4352435 ccggcctcggcggcgacctcc 4352415



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 196     ccccgccttccgccgccgct 215
               ||||||||||||||||||||
Sbjct: 1633624 ccccgccttccgccgccgct 1633643
to top
>dbj|AP003853.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0091E23
          Length = 155939

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 190   ctcgacccccgccttccgccgccgcttcc 218
             |||| |||||||||||| |||||||||||
Sbjct: 40910 ctcgtcccccgccttcctccgccgcttcc 40882
to top
>dbj|AP003840.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1634_B10
          Length = 100294

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 89    ctcggcggcgacctcctccgcgagatattcctcctcctccc 129
             ||||||| |||  |||||||||||||| |||||| ||||||
Sbjct: 72366 ctcggcgacgaaatcctccgcgagatactcctccccctccc 72406
to top
>dbj|AK105518.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F07, full
           insert sequence
          Length = 1543

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 190 ctcgacccccgccttccgccgccgcttcc 218
           |||| |||||||||||| |||||||||||
Sbjct: 299 ctcgtcccccgccttcctccgccgcttcc 327
to top
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 200    gccttccgccgccgcttccgcgagctgca 228
              |||||| ||||||||||| ||||||||||
Sbjct: 155598 gccttcagccgccgcttcggcgagctgca 155626
to top
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 491     ctgccgccgctgccggaggag 511
               |||||||||||||||||||||
Sbjct: 4318745 ctgccgccgctgccggaggag 4318765



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 475     gctggcgctggatctcctgccgccgctg 502
               |||||||||||||| |||||||| ||||
Sbjct: 2184533 gctggcgctggatcacctgccgcggctg 2184560
to top
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 112     gatattcctcctcctcccgtcgctg 136
               ||||||||||||||||||| |||||
Sbjct: 2910061 gatattcctcctcctcccgacgctg 2910085
to top
>ref|NM_184255.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1035

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 84  ccggcctcggcggcgacctc 103
           ||||||||||||||||||||
Sbjct: 528 ccggcctcggcggcgacctc 547
to top
>ref|XM_468406.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1293

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 286 cgcgcccttccgccgccggg 305
           ||||||||||||||||||||
Sbjct: 226 cgcgcccttccgccgccggg 207
to top
>gb|AC134928.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1164G01,
            complete sequence
          Length = 151938

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 199  cgccttccgccgccgcttccgcga 222
            |||| |||||||||||||||||||
Sbjct: 1789 cgccgtccgccgccgcttccgcga 1812
to top
>gb|AC134927.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1036C05,
              complete sequence
          Length = 143400

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 199    cgccttccgccgccgcttccgcga 222
              |||| |||||||||||||||||||
Sbjct: 105602 cgccgtccgccgccgcttccgcga 105625
to top
>ref|XM_427106.1| PREDICTED: Gallus gallus similar to HMG-box transcription factor
           (LOC429548), partial mRNA
          Length = 276

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 223 gctgcacccgcagccgctcc 242
           ||||||||||||||||||||
Sbjct: 22  gctgcacccgcagccgctcc 3
to top
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 277     cccttccttcgcgcccttcc 296
               ||||||||||||||||||||
Sbjct: 2998862 cccttccttcgcgcccttcc 2998881
to top
>ref|XM_531634.2| PREDICTED: Canis familiaris similar to citrate synthase
           (LOC474403), mRNA
          Length = 1822

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 6   tgcagcggcggcggctcccc 25
           ||||||||||||||||||||
Sbjct: 85  tgcagcggcggcggctcccc 104
to top
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 150    gcgcggccttcgcgtgccga 169
              ||||||||||||||||||||
Sbjct: 938802 gcgcggccttcgcgtgccga 938821
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 277     cccttccttcgcgcccttcc 296
               ||||||||||||||||||||
Sbjct: 2728816 cccttccttcgcgcccttcc 2728835
to top
>gb|AY131229.2| Streptomyces sp. 139 exopolysaccharide gene cluster, complete
            sequence
          Length = 31310

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 493  gccgccgctgccggaggagt 512
            ||||||||||||||||||||
Sbjct: 7924 gccgccgctgccggaggagt 7943
to top
>gb|AF432980.1| Otoglossum globuliferum 18S ribosomal RNA gene, partial sequence;
           internal transcribed spacer 1, 5.8S ribosomal RNA gene
           and internal transcribed spacer 2, complete sequence;
           and 26S ribosomal RNA gene, partial sequence
          Length = 774

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 270 cggccatcccttccttcgcgccct 293
           |||||||||||||| |||||||||
Sbjct: 154 cggccatcccttccgtcgcgccct 177
to top
>gb|AC009116.8| Homo sapiens chromosome 16 clone RP11-477D3, complete sequence
          Length = 172533

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 171    ccttcctggacgccgtccgc 190
              ||||||||||||||||||||
Sbjct: 130805 ccttcctggacgccgtccgc 130824
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 489     tcctgccgccgctgccggag 508
               ||||||||||||||||||||
Sbjct: 2788842 tcctgccgccgctgccggag 2788861
to top
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome
          Length = 2154946

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 541     cggcctcgactaccacatcc 560
               ||||||||||||||||||||
Sbjct: 1560985 cggcctcgactaccacatcc 1561004
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 6        tgcagcggcggcggctcccc 25
                ||||||||||||||||||||
Sbjct: 18912796 tgcagcggcggcggctcccc 18912815
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 284     ttcgcgcccttccgccgccg 303
               ||||||||||||||||||||
Sbjct: 7183137 ttcgcgcccttccgccgccg 7183118
to top
>dbj|AB197131.1| Gallus gallus sox17 mRNA for HMG transcription factor SOX17,
           complete cds
          Length = 1581

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 223 gctgcacccgcagccgctcc 242
           ||||||||||||||||||||
Sbjct: 383 gctgcacccgcagccgctcc 364
to top
>gb|AC116667.2| Homo sapiens chromosome 16 clone RP11-346C20, complete sequence
          Length = 156100

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 116    ttcctcctcctcccgtcgctgccg 139
              ||||||||||||||| ||||||||
Sbjct: 150179 ttcctcctcctcccgccgctgccg 150202
to top
>ref|NM_001039326.1| Gallus gallus HMG transcription factor SOX17 (SOX17), mRNA
          Length = 1581

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 223 gctgcacccgcagccgctcc 242
           ||||||||||||||||||||
Sbjct: 383 gctgcacccgcagccgctcc 364
to top
>dbj|AP004137.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1297_D02
          Length = 104470

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     tgcagcggcggcggctcccc 25
             ||||||||||||||||||||
Sbjct: 79549 tgcagcggcggcggctcccc 79568
to top
>dbj|AP002526.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0504H10
          Length = 143515

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 84     ccggcctcggcggcgacctc 103
              ||||||||||||||||||||
Sbjct: 123145 ccggcctcggcggcgacctc 123164
to top
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 337     cggcgacttcttcctcaccg 356
               ||||||||||||||||||||
Sbjct: 2460881 cggcgacttcttcctcaccg 2460900
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 511     gttctacgacgacttccagg 530
               ||||||||||||||||||||
Sbjct: 2273340 gttctacgacgacttccagg 2273321
to top
>dbj|AP003214.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0083M16
          Length = 179428

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    ccggcctcggcggcgacctc 103
             ||||||||||||||||||||
Sbjct: 22184 ccggcctcggcggcgacctc 22203
to top
>dbj|AP004995.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0068B06
          Length = 143712

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 284   ttcgcgcccttccgccgccg 303
             ||||||||||||||||||||
Sbjct: 60548 ttcgcgcccttccgccgccg 60529
to top
>dbj|AP004994.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0052G07
          Length = 156207

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 284   ttcgcgcccttccgccgccg 303
             ||||||||||||||||||||
Sbjct: 18141 ttcgcgcccttccgccgccg 18122
to top
>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0643F09
          Length = 161001

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 286    cgcgcccttccgccgccggg 305
              ||||||||||||||||||||
Sbjct: 131973 cgcgcccttccgccgccggg 131954
to top
>dbj|AP004059.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1372_D06
          Length = 129242

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      ttgcagcggcggcggctccc 24
              ||||||||||||||||||||
Sbjct: 107853 ttgcagcggcggcggctccc 107872
to top
>dbj|AP004053.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1234_B11
          Length = 128095

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     ttgcagcggcggcggctccc 24
             ||||||||||||||||||||
Sbjct: 26103 ttgcagcggcggcggctccc 26122
to top
>dbj|AP004028.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1136_C12
          Length = 103973

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 286   cgcgcccttccgccgccggg 305
             ||||||||||||||||||||
Sbjct: 44795 cgcgcccttccgccgccggg 44776
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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 429     tcgagcacatctacacgcgggatg 452
               ||||| ||||||||||||||||||
Sbjct: 1358139 tcgaggacatctacacgcgggatg 1358162
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>dbj|AK066689.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073J06, full
           insert sequence
          Length = 1923

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 199 cgccttccgccgccgcttccgcga 222
           |||| |||||||||||||||||||
Sbjct: 491 cgccgtccgccgccgcttccgcga 514
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>emb|CR450802.8| Zebrafish DNA sequence from clone CH211-197I12 in linkage group 22,
             complete sequence
          Length = 186908

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 237   cgctcctgggcatcttcttc 256
             ||||||||||||||||||||
Sbjct: 29976 cgctcctgggcatcttcttc 29995
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 322     ggccgccgtccggcgcggcg 341
               ||||||||||||||||||||
Sbjct: 1039480 ggccgccgtccggcgcggcg 1039461
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>dbj|D13457.1|STMCHO Streptomyces sp. genes for hypothetic proteins
          Length = 5800

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 322  ggccgccgtccggcgcggcg 341
            ||||||||||||||||||||
Sbjct: 4079 ggccgccgtccggcgcggcg 4098


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,690,699
Number of Sequences: 3902068
Number of extensions: 4690699
Number of successful extensions: 112980
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108259
Number of HSP's gapped (non-prelim): 4721
length of query: 568
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 545
effective length of database: 17,143,297,704
effective search space: 9343097248680
effective search space used: 9343097248680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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