ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart54c03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_474188.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1035 Score = 525 bits (265), Expect = e-146 Identities = 409/457 (89%) Strand = Plus / Plus Query: 173 gcaagggcgccaacgggctcgacaaggtcgtgctccgccagggcccccgcatctccgccg 232 ||||||||| |||||||||||||||||||| ||||| ||| || ||| ||| |||| Sbjct: 98 gcaagggcgtgaacgggctcgacaaggtcgtcctccgggaggtccgaggcagctctgccg 157 Query: 233 aggtgtacctgtatggtggccatgtaacatcatggaaagatcagtttggggaggagctgc 292 |||||||||||||||| |||||||| ||||||||||||||| || ||| |||||||||| Sbjct: 158 aggtgtacctgtatggcggccatgtcacatcatggaaagatgagcatggagaggagctgc 217 Query: 293 ttttcgttagtaataaggctattttcaaacctccaaaagctatacgtggaggtataccaa 352 |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 218 tttttgttagtaataaggctattttcaaacctccaaaagctatacgtggagggataccaa 277 Query: 353 tctgctttcctcagttttccaacttcggacatctggaagctcatggatttgcaaggaaca 412 ||||||||||||||||||||||||||||| ||||||| | ||||| ||||||||||||| Sbjct: 278 tctgctttcctcagttttccaacttcggaaatctggacccacatggctttgcaaggaaca 337 Query: 413 agatctggactgttgacactgatccaccaccatttccagtaccgatctctagtagagctt 472 || ||||| |||||| | |||||||||||||||||||||||| | |||| || ||||| Sbjct: 338 ggacctggagtgttgaaaatgatccaccaccatttccagtaccaacttctaataaagctt 397 Query: 473 acatcgatttaatccttaaacctactgacgaagacttaaagatctggccacatagttttg 532 || ||||||||||||||| | |||||| ||||| ||||||||||||||||||||| | Sbjct: 398 acgtcgatttaatccttacgcatactgaagaagatctaaagatctggccacatagttacg 457 Query: 533 agtaccgtctgaggattgcacttggacctggtggagatctgatgctgacttcacgtataa 592 ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 458 agttccgtctgagagttgcacttggacctggtggagatctgatgctgacttcacgtataa 517 Query: 593 ggaataccaatgcagatggaaagccattctcttttac 629 | ||||||||||||||||||||||||||||| ||||| Sbjct: 518 gaaataccaatgcagatggaaagccattctcatttac 554
>dbj|AK071255.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086C22, full insert sequence Length = 1660 Score = 525 bits (265), Expect = e-146 Identities = 409/457 (89%) Strand = Plus / Plus Query: 173 gcaagggcgccaacgggctcgacaaggtcgtgctccgccagggcccccgcatctccgccg 232 ||||||||| |||||||||||||||||||| ||||| ||| || ||| ||| |||| Sbjct: 320 gcaagggcgtgaacgggctcgacaaggtcgtcctccgggaggtccgaggcagctctgccg 379 Query: 233 aggtgtacctgtatggtggccatgtaacatcatggaaagatcagtttggggaggagctgc 292 |||||||||||||||| |||||||| ||||||||||||||| || ||| |||||||||| Sbjct: 380 aggtgtacctgtatggcggccatgtcacatcatggaaagatgagcatggagaggagctgc 439 Query: 293 ttttcgttagtaataaggctattttcaaacctccaaaagctatacgtggaggtataccaa 352 |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 440 tttttgttagtaataaggctattttcaaacctccaaaagctatacgtggagggataccaa 499 Query: 353 tctgctttcctcagttttccaacttcggacatctggaagctcatggatttgcaaggaaca 412 ||||||||||||||||||||||||||||| ||||||| | ||||| ||||||||||||| Sbjct: 500 tctgctttcctcagttttccaacttcggaaatctggacccacatggctttgcaaggaaca 559 Query: 413 agatctggactgttgacactgatccaccaccatttccagtaccgatctctagtagagctt 472 || ||||| |||||| | |||||||||||||||||||||||| | |||| || ||||| Sbjct: 560 ggacctggagtgttgaaaatgatccaccaccatttccagtaccaacttctaataaagctt 619 Query: 473 acatcgatttaatccttaaacctactgacgaagacttaaagatctggccacatagttttg 532 || ||||||||||||||| | |||||| ||||| ||||||||||||||||||||| | Sbjct: 620 acgtcgatttaatccttacgcatactgaagaagatctaaagatctggccacatagttacg 679 Query: 533 agtaccgtctgaggattgcacttggacctggtggagatctgatgctgacttcacgtataa 592 ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 680 agttccgtctgagagttgcacttggacctggtggagatctgatgctgacttcacgtataa 739 Query: 593 ggaataccaatgcagatggaaagccattctcttttac 629 | ||||||||||||||||||||||||||||| ||||| Sbjct: 740 gaaataccaatgcagatggaaagccattctcatttac 776
>gb|AY104413.1| Zea mays PCO098503 mRNA sequence Length = 1571 Score = 329 bits (166), Expect = 6e-87 Identities = 382/454 (84%) Strand = Plus / Plus Query: 173 gcaagggcgccaacgggctcgacaaggtcgtgctccgccagggcccccgcatctccgccg 232 ||||||||| ||||| |||||||||||||| |||||| ||| || ||| |||||| | Sbjct: 331 gcaagggcgtcaacgacctcgacaaggtcgttctccgcgaggtccggggcagctccgcag 390 Query: 233 aggtgtacctgtatggtggccatgtaacatcatggaaagatcagtttggggaggagctgc 292 |||||||| |||||||||| ||||| ||||||||||||||| || ||| || || | | Sbjct: 391 aggtgtacttgtatggtgggcatgtgacatcatggaaagatgagcatggagatgaattac 450 Query: 293 ttttcgttagtaataaggctattttcaaacctccaaaagctatacgtggaggtataccaa 352 |||| ||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 451 tttttgttagcaataaggctattttcaagcctccaaaagctatacgtggaggaataccaa 510 Query: 353 tctgctttcctcagttttccaacttcggacatctggaagctcatggatttgcaaggaaca 412 | |||||||| ||||| |||||||| || |||||||| | ||||||||||||||||| | Sbjct: 511 tatgctttccgcagttctccaactttgggaatctggaaccacatggatttgcaaggaata 570 Query: 413 agatctggactgttgacactgatccaccaccatttccagtaccgatctctagtagagctt 472 || |||| |||||| |||||| |||||||||||||| || | ||| | ||| |||| Sbjct: 571 ggacatggagtgttgatgatgatcctccaccatttccagtgccaacctccaatagcgctt 630 Query: 473 acatcgatttaatccttaaacctactgacgaagacttaaagatctggccacatagttttg 532 | || || || ||||| ||||||||||| || || || ||||||||||| |||||||||| Sbjct: 631 atattgacttgatcctcaaacctactgaagatgatttgaagatctggcctcatagttttg 690 Query: 533 agtaccgtctgaggattgcacttggacctggtggagatctgatgctgacttcacgtataa 592 | ||||| |||||| |||||||| | |||||||| ||| ||||||| ||||||||||||| Sbjct: 691 aataccgcctgagggttgcacttagtcctggtggtgatttgatgctaacttcacgtataa 750 Query: 593 ggaataccaatgcagatggaaagccattctcttt 626 | || || |||||||| || |||||||||||||| Sbjct: 751 gaaacactaatgcagacgggaagccattctcttt 784
>gb|BT016450.1| Zea mays clone Contig283 mRNA sequence Length = 1470 Score = 313 bits (158), Expect = 4e-82 Identities = 380/454 (83%) Strand = Plus / Plus Query: 173 gcaagggcgccaacgggctcgacaaggtcgtgctccgccagggcccccgcatctccgccg 232 ||||||||| ||||| |||||||||||||| |||||| ||| || ||| |||||| | Sbjct: 183 gcaagggcgtcaacgacctcgacaaggtcgttctccgcgaggtccggggcagctccgcag 242 Query: 233 aggtgtacctgtatggtggccatgtaacatcatggaaagatcagtttggggaggagctgc 292 |||||||| |||||||||| ||||| ||||||||||||||| || ||| || || | | Sbjct: 243 aggtgtacttgtatggtgggcatgtgacatcatggaaagatgagcatggagatgaattac 302 Query: 293 ttttcgttagtaataaggctattttcaaacctccaaaagctatacgtggaggtataccaa 352 |||| ||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 303 tttttgttagcaataaggctattttcaagcctccaaaagctatacgtggaggaataccaa 362 Query: 353 tctgctttcctcagttttccaacttcggacatctggaagctcatggatttgcaaggaaca 412 | |||||||| ||||| |||||||| || |||||||| | ||||||||||||||||| | Sbjct: 363 tatgctttccgcagttctccaactttgggaatctggaaccacatggatttgcaaggaata 422 Query: 413 agatctggactgttgacactgatccaccaccatttccagtaccgatctctagtagagctt 472 || |||| |||||| |||||| || ||||||||||| || | ||| | ||| |||| Sbjct: 423 ggacatggagtgttgatgatgatcctccgccatttccagtgccaacctccaatagcgctt 482 Query: 473 acatcgatttaatccttaaacctactgacgaagacttaaagatctggccacatagttttg 532 | | || || ||||| ||||||||||| || || || ||||||||||| |||||||||| Sbjct: 483 atgttgacttgatcctcaaacctactgaagatgatttgaagatctggcctcatagttttg 542 Query: 533 agtaccgtctgaggattgcacttggacctggtggagatctgatgctgacttcacgtataa 592 | ||||| |||||| |||||||| | |||||||| ||| ||||||| ||||||||||||| Sbjct: 543 aataccgcctgagggttgcacttagtcctggtggtgatttgatgctaacttcacgtataa 602 Query: 593 ggaataccaatgcagatggaaagccattctcttt 626 | || || |||||||| || |||||||||||||| Sbjct: 603 gaaacactaatgcagacgggaagccattctcttt 636
>dbj|AK068928.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170O13, full insert sequence Length = 3699 Score = 234 bits (118), Expect = 3e-58 Identities = 175/194 (90%) Strand = Plus / Plus Query: 173 gcaagggcgccaacgggctcgacaaggtcgtgctccgccagggcccccgcatctccgccg 232 ||||||||| |||||||||||||||||||| ||||| ||| || ||| ||| |||| Sbjct: 390 gcaagggcgtgaacgggctcgacaaggtcgtcctccgggaggtccgaggcagctctgccg 449 Query: 233 aggtgtacctgtatggtggccatgtaacatcatggaaagatcagtttggggaggagctgc 292 |||||||||||||||| |||||||| ||||||||||||||| || ||| |||||||||| Sbjct: 450 aggtgtacctgtatggcggccatgtcacatcatggaaagatgagcatggagaggagctgc 509 Query: 293 ttttcgttagtaataaggctattttcaaacctccaaaagctatacgtggaggtataccaa 352 |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 510 tttttgttagtaataaggctattttcaaacctccaaaagctatacgtggagggataccaa 569 Query: 353 tctgctttcctcag 366 |||||||||||||| Sbjct: 570 tctgctttcctcag 583 Score = 155 bits (78), Expect = 2e-34 Identities = 93/98 (94%) Strand = Plus / Plus Query: 532 gagtaccgtctgaggattgcacttggacctggtggagatctgatgctgacttcacgtata 591 |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 997 gagttccgtctgagagttgcacttggacctggtggagatctgatgctgacttcacgtata 1056 Query: 592 aggaataccaatgcagatggaaagccattctcttttac 629 || ||||||||||||||||||||||||||||| ||||| Sbjct: 1057 agaaataccaatgcagatggaaagccattctcatttac 1094 Score = 135 bits (68), Expect = 2e-28 Identities = 134/156 (85%) Strand = Plus / Plus Query: 372 caacttcggacatctggaagctcatggatttgcaaggaacaagatctggactgttgacac 431 |||||||||| ||||||| | ||||| ||||||||||||| || ||||| |||||| | Sbjct: 679 caacttcggaaatctggacccacatggctttgcaaggaacaggacctggagtgttgaaaa 738 Query: 432 tgatccaccaccatttccagtaccgatctctagtagagcttacatcgatttaatccttaa 491 |||||||||||||||||||||||| | |||| || ||||||| ||||||||||||||| Sbjct: 739 tgatccaccaccatttccagtaccaacttctaataaagcttacgtcgatttaatccttac 798 Query: 492 acctactgacgaagacttaaagatctggccacatag 527 | |||||| ||||| ||||||||||||||||||| Sbjct: 799 gcatactgaagaagatctaaagatctggccacatag 834
>emb|AL662953.3|OSJN00153 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011F23, complete sequence Length = 149353 Score = 155 bits (78), Expect = 2e-34 Identities = 93/98 (94%) Strand = Plus / Plus Query: 532 gagtaccgtctgaggattgcacttggacctggtggagatctgatgctgacttcacgtata 591 |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26018 gagttccgtctgagagttgcacttggacctggtggagatctgatgctgacttcacgtata 26077 Query: 592 aggaataccaatgcagatggaaagccattctcttttac 629 || ||||||||||||||||||||||||||||| ||||| Sbjct: 26078 agaaataccaatgcagatggaaagccattctcatttac 26115 Score = 149 bits (75), Expect = 1e-32 Identities = 141/163 (86%) Strand = Plus / Plus Query: 365 agttttccaacttcggacatctggaagctcatggatttgcaaggaacaagatctggactg 424 ||||||||||||||||| ||||||| | ||||| ||||||||||||| || ||||| || Sbjct: 25693 agttttccaacttcggaaatctggacccacatggctttgcaaggaacaggacctggagtg 25752 Query: 425 ttgacactgatccaccaccatttccagtaccgatctctagtagagcttacatcgatttaa 484 |||| | |||||||||||||||||||||||| | |||| || ||||||| ||||||||| Sbjct: 25753 ttgaaaatgatccaccaccatttccagtaccaacttctaataaagcttacgtcgatttaa 25812 Query: 485 tccttaaacctactgacgaagacttaaagatctggccacatag 527 |||||| | |||||| ||||| ||||||||||||||||||| Sbjct: 25813 tccttacgcatactgaagaagatctaaagatctggccacatag 25855 Score = 109 bits (55), Expect = 1e-20 Identities = 58/59 (98%) Strand = Plus / Plus Query: 308 aggctattttcaaacctccaaaagctatacgtggaggtataccaatctgctttcctcag 366 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 25545 aggctattttcaaacctccaaaagctatacgtggagggataccaatctgctttcctcag 25603 Score = 99.6 bits (50), Expect = 1e-17 Identities = 71/78 (91%) Strand = Plus / Plus Query: 233 aggtgtacctgtatggtggccatgtaacatcatggaaagatcagtttggggaggagctgc 292 |||||||||||||||| |||||||| ||||||||||||||| || ||| |||||||||| Sbjct: 25085 aggtgtacctgtatggcggccatgtcacatcatggaaagatgagcatggagaggagctgc 25144 Query: 293 ttttcgttagtaataagg 310 |||| ||||||||||||| Sbjct: 25145 tttttgttagtaataagg 25162 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 173 gcaagggcgccaacgggctcgacaaggtcgtgctccg 209 ||||||||| |||||||||||||||||||| ||||| Sbjct: 22727 gcaagggcgtgaacgggctcgacaaggtcgtcctccg 22763
>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence Length = 181577 Score = 155 bits (78), Expect = 2e-34 Identities = 93/98 (94%) Strand = Plus / Plus Query: 532 gagtaccgtctgaggattgcacttggacctggtggagatctgatgctgacttcacgtata 591 |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26212 gagttccgtctgagagttgcacttggacctggtggagatctgatgctgacttcacgtata 26271 Query: 592 aggaataccaatgcagatggaaagccattctcttttac 629 || ||||||||||||||||||||||||||||| ||||| Sbjct: 26272 agaaataccaatgcagatggaaagccattctcatttac 26309 Score = 149 bits (75), Expect = 1e-32 Identities = 141/163 (86%) Strand = Plus / Plus Query: 365 agttttccaacttcggacatctggaagctcatggatttgcaaggaacaagatctggactg 424 ||||||||||||||||| ||||||| | ||||| ||||||||||||| || ||||| || Sbjct: 25887 agttttccaacttcggaaatctggacccacatggctttgcaaggaacaggacctggagtg 25946 Query: 425 ttgacactgatccaccaccatttccagtaccgatctctagtagagcttacatcgatttaa 484 |||| | |||||||||||||||||||||||| | |||| || ||||||| ||||||||| Sbjct: 25947 ttgaaaatgatccaccaccatttccagtaccaacttctaataaagcttacgtcgatttaa 26006 Query: 485 tccttaaacctactgacgaagacttaaagatctggccacatag 527 |||||| | |||||| ||||| ||||||||||||||||||| Sbjct: 26007 tccttacgcatactgaagaagatctaaagatctggccacatag 26049 Score = 109 bits (55), Expect = 1e-20 Identities = 58/59 (98%) Strand = Plus / Plus Query: 308 aggctattttcaaacctccaaaagctatacgtggaggtataccaatctgctttcctcag 366 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 25739 aggctattttcaaacctccaaaagctatacgtggagggataccaatctgctttcctcag 25797 Score = 99.6 bits (50), Expect = 1e-17 Identities = 71/78 (91%) Strand = Plus / Plus Query: 233 aggtgtacctgtatggtggccatgtaacatcatggaaagatcagtttggggaggagctgc 292 |||||||||||||||| |||||||| ||||||||||||||| || ||| |||||||||| Sbjct: 25279 aggtgtacctgtatggcggccatgtcacatcatggaaagatgagcatggagaggagctgc 25338 Query: 293 ttttcgttagtaataagg 310 |||| ||||||||||||| Sbjct: 25339 tttttgttagtaataagg 25356 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 173 gcaagggcgccaacgggctcgacaaggtcgtgctccg 209 ||||||||| |||||||||||||||||||| ||||| Sbjct: 22921 gcaagggcgtgaacgggctcgacaaggtcgtcctccg 22957
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 155 bits (78), Expect = 2e-34 Identities = 93/98 (94%) Strand = Plus / Plus Query: 532 gagtaccgtctgaggattgcacttggacctggtggagatctgatgctgacttcacgtata 591 |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33594958 gagttccgtctgagagttgcacttggacctggtggagatctgatgctgacttcacgtata 33595017 Query: 592 aggaataccaatgcagatggaaagccattctcttttac 629 || ||||||||||||||||||||||||||||| ||||| Sbjct: 33595018 agaaataccaatgcagatggaaagccattctcatttac 33595055 Score = 149 bits (75), Expect = 1e-32 Identities = 141/163 (86%) Strand = Plus / Plus Query: 365 agttttccaacttcggacatctggaagctcatggatttgcaaggaacaagatctggactg 424 ||||||||||||||||| ||||||| | ||||| ||||||||||||| || ||||| || Sbjct: 33594633 agttttccaacttcggaaatctggacccacatggctttgcaaggaacaggacctggagtg 33594692 Query: 425 ttgacactgatccaccaccatttccagtaccgatctctagtagagcttacatcgatttaa 484 |||| | |||||||||||||||||||||||| | |||| || ||||||| ||||||||| Sbjct: 33594693 ttgaaaatgatccaccaccatttccagtaccaacttctaataaagcttacgtcgatttaa 33594752 Query: 485 tccttaaacctactgacgaagacttaaagatctggccacatag 527 |||||| | |||||| ||||| ||||||||||||||||||| Sbjct: 33594753 tccttacgcatactgaagaagatctaaagatctggccacatag 33594795 Score = 109 bits (55), Expect = 1e-20 Identities = 58/59 (98%) Strand = Plus / Plus Query: 308 aggctattttcaaacctccaaaagctatacgtggaggtataccaatctgctttcctcag 366 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 33594485 aggctattttcaaacctccaaaagctatacgtggagggataccaatctgctttcctcag 33594543 Score = 99.6 bits (50), Expect = 1e-17 Identities = 71/78 (91%) Strand = Plus / Plus Query: 233 aggtgtacctgtatggtggccatgtaacatcatggaaagatcagtttggggaggagctgc 292 |||||||||||||||| |||||||| ||||||||||||||| || ||| |||||||||| Sbjct: 33594025 aggtgtacctgtatggcggccatgtcacatcatggaaagatgagcatggagaggagctgc 33594084 Query: 293 ttttcgttagtaataagg 310 |||| ||||||||||||| Sbjct: 33594085 tttttgttagtaataagg 33594102 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 173 gcaagggcgccaacgggctcgacaaggtcgtgctccg 209 ||||||||| |||||||||||||||||||| ||||| Sbjct: 33591667 gcaagggcgtgaacgggctcgacaaggtcgtcctccg 33591703 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 ctcgacaaggtcgtgctccgc 210 ||||||||||||||||||||| Sbjct: 30467408 ctcgacaaggtcgtgctccgc 30467428
>gb|AY105198.1| Zea mays PCO070011 mRNA sequence Length = 1505 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 307 aaggctattttcaaacctccaaaagctatacgtggaggtataccaatctgctttcc 362 ||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| Sbjct: 346 aaggctattttcaaacctccaaaagctattcgtggtggtataccaatttgctttcc 401
>dbj|D37938.1|PENPSBCA Pennisetum ciliare apomixis-associated mRNA, clone:psb C Length = 1398 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 307 aaggctattttcaaacctccaaaagctatacgtggaggtataccaatctgctttcc 362 |||||||||||||||||||||||||| || ||||| |||||||| |||||| |||| Sbjct: 315 aaggctattttcaaacctccaaaagccattcgtggtggtatacccatctgccttcc 370 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 497 ctgacgaagacttaaagatctggccacatagttttgagt 535 |||| ||||| |||||||||||||| || |||||||||| Sbjct: 505 ctgaagaagatttaaagatctggcctcacagttttgagt 543
>gb|U13148.1|PCU13148 Pennisetum ciliare possible apospory-associated mRNA clone pSUB C, complete cds Length = 1398 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 307 aaggctattttcaaacctccaaaagctatacgtggaggtataccaatctgctttcc 362 |||||||||||||||||||||||||| || ||||| |||||||| |||||| |||| Sbjct: 315 aaggctattttcaaacctccaaaagccattcgtggtggtatacccatctgccttcc 370 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 497 ctgacgaagacttaaagatctggccacatagttttgagt 535 |||| ||||| |||||||||||||| || |||||||||| Sbjct: 505 ctgaagaagatttaaagatctggcctcacagttttgagt 543
>emb|Z36544.1|PCAPOSPA1 P.ciliare (Higgins) apospory associated mRNA, 1398bp Length = 1398 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 307 aaggctattttcaaacctccaaaagctatacgtggaggtataccaatctgctttcc 362 |||||||||||||||||||||||||| || ||||| |||||||| |||||| |||| Sbjct: 315 aaggctattttcaaacctccaaaagccattcgtggtggtatacccatctgccttcc 370 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 497 ctgacgaagacttaaagatctggccacatagttttgagt 535 |||| ||||| |||||||||||||| || |||||||||| Sbjct: 505 ctgaagaagatttaaagatctggcctcacagttttgagt 543
>ref|XM_480917.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1014 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 282 ggaggagctgcttttcgttagtaataaggctattttcaaacctccaaaagctatacgtgg 341 ||||||| ||||||| || || | ||||||||||||||||||||||||||| || ||||| Sbjct: 213 ggaggagttgctttttgtcagcagtaaggctattttcaaacctccaaaagccattcgtgg 272 Query: 342 aggtataccaatctgctt 359 || ||||| || ||||| Sbjct: 273 tgggatacccatttgctt 290 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 497 ctgacgaagacttaaagatctggccacatagttttgagt 535 ||||||| || |||||||||||||| || |||||||||| Sbjct: 428 ctgacgaggatttaaagatctggcctcacagttttgagt 466
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 565 ggagatctgatgctgacttcacgtataaggaataccaatgcagatggaaagccattc 621 |||||||||||||| || || || |||| ||||||||||||||||| ||||||||| Sbjct: 4221999 ggagatctgatgctcacatctcgaataaaaaataccaatgcagatgggaagccattc 4221943 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 315 tttcaaacctccaaaagctatacgtggaggtataccaatctgctttcctca 365 ||||||||| ||||| ||||| ||||| || |||| ||| ||||||||||| Sbjct: 4222465 tttcaaaccaccaaaggctattcgtgggggcatacaaatttgctttcctca 4222415 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 actcgctcgctcgctcgctc 99 |||||||||||||||||||| Sbjct: 4577879 actcgctcgctcgctcgctc 4577898
>dbj|AP004838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0504A05 Length = 148360 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 565 ggagatctgatgctgacttcacgtataaggaataccaatgcagatggaaagccattc 621 |||||||||||||| || || || |||| ||||||||||||||||| ||||||||| Sbjct: 38813 ggagatctgatgctcacatctcgaataaaaaataccaatgcagatgggaagccattc 38757 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 315 tttcaaacctccaaaagctatacgtggaggtataccaatctgctttcctca 365 ||||||||| ||||| ||||| ||||| || |||| ||| ||||||||||| Sbjct: 39279 tttcaaaccaccaaaggctattcgtgggggcatacaaatttgctttcctca 39229
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 308 aggctattttcaaacctccaaaagctatacgtggaggtataccaatctgctt 359 ||||||||||||||||||||||||| || ||||| || ||||| || ||||| Sbjct: 8586055 aggctattttcaaacctccaaaagccattcgtggtgggatacccatttgctt 8586004 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 75 acctcactcgctcgctcgctcgctcc 100 ||||| |||||||||||||||||||| Sbjct: 28298059 acctcgctcgctcgctcgctcgctcc 28298034
>dbj|AP005249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0087F21 Length = 187401 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 308 aggctattttcaaacctccaaaagctatacgtggaggtataccaatctgctt 359 ||||||||||||||||||||||||| || ||||| || ||||| || ||||| Sbjct: 97966 aggctattttcaaacctccaaaagccattcgtggtgggatacccatttgctt 97915
>dbj|AP004657.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0031C02 Length = 138843 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 308 aggctattttcaaacctccaaaagctatacgtggaggtataccaatctgctt 359 ||||||||||||||||||||||||| || ||||| || ||||| || ||||| Sbjct: 115598 aggctattttcaaacctccaaaagccattcgtggtgggatacccatttgctt 115547
>gb|AC155282.1| Medicago truncatula chromosome 2 BAC clone mth2-63e12, complete sequence Length = 251117 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 308 aggctattttcaaacctccaaaagctatacgtggaggtataccaatctgctttcc 362 ||||||| ||||| ||||| || ||||| |||||||| || |||||||||||||| Sbjct: 163420 aggctatcttcaagcctcctaaggctattcgtggagggattccaatctgctttcc 163474 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 525 tagttttgagtaccgtctgagg 546 |||||||||||||||||||||| Sbjct: 164894 tagttttgagtaccgtctgagg 164915
>ref|NM_004384.2| Homo sapiens casein kinase 1, gamma 3 (CSNK1G3), transcript variant 1, mRNA Length = 4352 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 75 acctcactcgctcgctcgctcgctccctgc 104 ||||| |||||||||||||||||||||||| Sbjct: 226 acctcgctcgctcgctcgctcgctccctgc 255
>ref|NM_001031812.1| Homo sapiens casein kinase 1, gamma 3 (CSNK1G3), transcript variant 2, mRNA Length = 4280 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 75 acctcactcgctcgctcgctcgctccctgc 104 ||||| |||||||||||||||||||||||| Sbjct: 226 acctcgctcgctcgctcgctcgctccctgc 255
>gb|AC106767.2| Homo sapiens chromosome 5 clone RP11-269M17, complete sequence Length = 143792 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 75 acctcactcgctcgctcgctcgctccctgc 104 ||||| |||||||||||||||||||||||| Sbjct: 70711 acctcgctcgctcgctcgctcgctccctgc 70682
>gb|AC026422.5| Homo sapiens chromosome 5 clone CTD-2169H9, complete sequence Length = 67542 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 75 acctcactcgctcgctcgctcgctccctgc 104 ||||| |||||||||||||||||||||||| Sbjct: 33527 acctcgctcgctcgctcgctcgctccctgc 33556
>gb|AC134561.5| Mus musculus BAC clone RP24-111C16 from chromosome 8, complete sequence Length = 179978 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 76 cctcactcgctcgctcgctcgctc 99 |||||||||||||||||||||||| Sbjct: 79686 cctcactcgctcgctcgctcgctc 79663
>gb|AC010030.10| Drosophila melanogaster 3L BAC RP98-2C14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 200859 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgctccctgc 104 |||||||||||||||||||||| ||||| Sbjct: 35732 ctcactcgctcgctcgctcgctgcctgc 35705 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgctccctgc 104 ||||||| ||||||||||||||| |||| Sbjct: 35736 ctcactcactcgctcgctcgctcgctgc 35709
>dbj|AK013771.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:2900073C17 product:unclassifiable, full insert sequence Length = 1150 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgctcc 100 |||||||||||||||||||||||| Sbjct: 25 ctcactcgctcgctcgctcgctcc 2
>gb|AE003547.3| Drosophila melanogaster chromosome 3L, section 38 of 83 of the complete sequence Length = 281339 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgctccctgc 104 |||||||||||||||||||||| ||||| Sbjct: 245626 ctcactcgctcgctcgctcgctgcctgc 245599 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgctccctgc 104 ||||||| ||||||||||||||| |||| Sbjct: 245630 ctcactcactcgctcgctcgctcgctgc 245603
>ref|NM_116026.2| Arabidopsis thaliana aldose 1-epimerase AT3G61610 mRNA, complete cds Length = 1583 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 286 gagctgcttttcgttagtaataaggctattttcaaacctccaaaagctatacgtggagg 344 ||||| |||||| ||| ||||||||||| |||||||| |||||| | || |||||||| Sbjct: 616 gagcttcttttcactagcaataaggctatattcaaacccccaaaatcaatgcgtggagg 674
>gb|AY785825.1| Hordeum vulgare subsp. vulgare cultivar Morex MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1151 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 82 tcgctcgctcgctcgctccctgctgcc 108 |||||||||||||||||| |||||||| Sbjct: 82 tcgctcgctcgctcgctcgctgctgcc 108
>gb|AY785832.1| Hordeum vulgare subsp. spontaneum cultivar OSU11 Caesarea 26-24 MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1117 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 82 tcgctcgctcgctcgctccctgctgcc 108 |||||||||||||||||| |||||||| Sbjct: 49 tcgctcgctcgctcgctcgctgctgcc 75
>gb|AY785829.1| Hordeum vulgare subsp. vulgare cultivar Harrington MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1117 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 82 tcgctcgctcgctcgctccctgctgcc 108 |||||||||||||||||| |||||||| Sbjct: 49 tcgctcgctcgctcgctcgctgctgcc 75
>gb|AY785826.1| Hordeum vulgare subsp. vulgare cultivar Morex MADS-box protein HvBM5A (BM5A) mRNA, complete cds Length = 1117 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 82 tcgctcgctcgctcgctccctgctgcc 108 |||||||||||||||||| |||||||| Sbjct: 49 tcgctcgctcgctcgctcgctgctgcc 75
>gb|AY785820.1| Hordeum vulgare subsp. spontaneum cultivar OSU11 Caesarea 26-24 MADS-box protein HvBM5A (BM5A) gene, promoter region and partial cds Length = 2210 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 82 tcgctcgctcgctcgctccctgctgcc 108 |||||||||||||||||| |||||||| Sbjct: 2074 tcgctcgctcgctcgctcgctgctgcc 2100
>gb|AY785816.1| Hordeum vulgare subsp. vulgare cultivar Harrington MADS-box protein HvBM5A (BM5A) gene, promoter region and partial cds Length = 2210 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 82 tcgctcgctcgctcgctccctgctgcc 108 |||||||||||||||||| |||||||| Sbjct: 2074 tcgctcgctcgctcgctcgctgctgcc 2100
>gb|AY785815.1| Hordeum vulgare subsp. vulgare cultivar Morex MADS-box protein HvBM5A (BM5A) gene, promoter region and partial cds Length = 2208 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 82 tcgctcgctcgctcgctccctgctgcc 108 |||||||||||||||||| |||||||| Sbjct: 2072 tcgctcgctcgctcgctcgctgctgcc 2098
>gb|AC113538.14| Mus musculus chromosome 8, clone RP23-118F24, complete sequence Length = 206380 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 77 ctcactcgctcgctcgctcgctc 99 ||||||||||||||||||||||| Sbjct: 173940 ctcactcgctcgctcgctcgctc 173962
>gb|AC103360.9| Mus musculus chromosome 8, clone RP24-414A22, complete sequence Length = 172618 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 77 ctcactcgctcgctcgctcgctc 99 ||||||||||||||||||||||| Sbjct: 102028 ctcactcgctcgctcgctcgctc 102050
>gb|AC161792.9| Mus musculus chromosome 7, clone RP23-288B12, complete sequence Length = 166375 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgctc 99 ||||||||||||||||||||||| Sbjct: 80680 ctcactcgctcgctcgctcgctc 80658
>gb|AC161505.4| Mus musculus chromosome 8, clone RP24-307K17, complete sequence Length = 215514 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgctc 99 ||||||||||||||||||||||| Sbjct: 198810 ctcactcgctcgctcgctcgctc 198788
>gb|AC153152.4| Mus musculus BAC clone RP23-78F1 from chromosome 12, complete sequence Length = 184523 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgctc 99 ||||||||||||||||||||||| Sbjct: 176106 ctcactcgctcgctcgctcgctc 176084
>gb|AY758237.1| Hordeum vulgare cultivar Golden Promise BM5a mRNA, complete cds Length = 1157 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 82 tcgctcgctcgctcgctccctgctgcc 108 |||||||||||||||||| |||||||| Sbjct: 82 tcgctcgctcgctcgctcgctgctgcc 108
>gb|AY758233.1| Hordeum vulgare subsp. vulgare cultivar Morex BM5a gene, complete cds Length = 12080 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 82 tcgctcgctcgctcgctccctgctgcc 108 |||||||||||||||||| |||||||| Sbjct: 1318 tcgctcgctcgctcgctcgctgctgcc 1344
>gb|AC094571.8| Rattus norvegicus 20 BAC CH230-4L21 (Children's Hospital Oakland Research Institute) complete sequence Length = 230137 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 77 ctcactcgctcgctcgctcgctc 99 ||||||||||||||||||||||| Sbjct: 218462 ctcactcgctcgctcgctcgctc 218484
>gb|AC116595.4| Mus musculus BAC clone RP24-127G9 from chromosome 18, complete sequence Length = 158788 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgctc 99 ||||||||||||||||||||||| Sbjct: 148068 ctcactcgctcgctcgctcgctc 148046
>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete sequence Length = 101158 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 82 tcgctcgctcgctcgctccctgctgcc 108 |||||||||||||||||| |||||||| Sbjct: 53038 tcgctcgctcgctcgctcgctgctgcc 53064
>gb|AC129330.4| Mus musculus BAC clone RP23-61B8 from chromosome 8, complete sequence Length = 218698 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 77 ctcactcgctcgctcgctcgctc 99 ||||||||||||||||||||||| Sbjct: 50262 ctcactcgctcgctcgctcgctc 50284
>emb|AJ249144.1|HVU249144 Hordeum vulgare mRNA for MADS-box protein 5 (m5 gene) Length = 1196 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 82 tcgctcgctcgctcgctccctgctgcc 108 |||||||||||||||||| |||||||| Sbjct: 88 tcgctcgctcgctcgctcgctgctgcc 114
>gb|AC137096.10| Mus musculus chromosome 8, clone RP24-473D4, complete sequence Length = 149463 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgctc 99 ||||||||||||||||||||||| Sbjct: 74004 ctcactcgctcgctcgctcgctc 73982
>gb|AC101796.8| Mus musculus chromosome 1, clone RP24-206P18, complete sequence Length = 171181 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 77 ctcactcgctcgctcgctcgctc 99 ||||||||||||||||||||||| Sbjct: 122467 ctcactcgctcgctcgctcgctc 122489
>gb|AC163668.5| Mus musculus BAC clone RP23-32P22 from chromosome 1, complete sequence Length = 222156 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 77 ctcactcgctcgctcgctcgctc 99 ||||||||||||||||||||||| Sbjct: 167817 ctcactcgctcgctcgctcgctc 167839
>emb|CR407592.10| Zebrafish DNA sequence from clone DKEY-166N5, complete sequence Length = 147299 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 77 ctcactcgctcgctcgctcgctc 99 ||||||||||||||||||||||| Sbjct: 113566 ctcactcgctcgctcgctcgctc 113588
>gb|AC121903.2| Mus musculus BAC clone RP24-174G24 from 18, complete sequence Length = 172114 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgctc 99 ||||||||||||||||||||||| Sbjct: 58372 ctcactcgctcgctcgctcgctc 58350
>gb|AC101875.7| Mus musculus chromosome 12, clone RP23-367G12, complete sequence Length = 184813 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 77 ctcactcgctcgctcgctcgctc 99 ||||||||||||||||||||||| Sbjct: 144708 ctcactcgctcgctcgctcgctc 144730
>gb|BC028287.1| Mus musculus ligase I, DNA, ATP-dependent, mRNA (cDNA clone MGC:25340 IMAGE:4911261), complete cds Length = 3050 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgctc 99 ||||||||||||||||||||||| Sbjct: 23 ctcactcgctcgctcgctcgctc 1
>gb|AC163994.4| Mus musculus chromosome 1, clone RP24-132H2, complete sequence Length = 160383 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 77 ctcactcgctcgctcgctcgctc 99 ||||||||||||||||||||||| Sbjct: 143568 ctcactcgctcgctcgctcgctc 143590
>emb|AL031984.13|HS173D1 Human DNA sequence from clone RP1-173D1 on chromosome 1p36.21-36.33 Contains the 5' UTR of the gene for a novel protein (FLJ34970, FLJ20321) and a CpG island, complete sequence Length = 117338 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 81 ctcgctcgctcgctcgctccctgctgc 107 ||||||||||||| ||||||||||||| Sbjct: 52651 ctcgctcgctcgcccgctccctgctgc 52677
>emb|AJ009961.1|FRU009961 Fugu rubripes PRGFR1 gene, exons 1-20 Length = 45370 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 5 cctgtcctgtcctgtcccgtccc 27 ||||||||||||||||||||||| Sbjct: 13068 cctgtcctgtcctgtcccgtccc 13090
>emb|AL596450.8| Mouse DNA sequence from clone RP23-373H2 on chromosome 11 Contains the 3' end of the Ddc gene for dopa decarboxylase, the Fignl1 gene for fidgetin-like 1, the Znfn1a1 gene for zinc finger protein, subfamily 1A, 1 (Ikaros), two novel genes and two CpG islands, complete sequence Length = 203257 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgctc 99 ||||||||||||||||||||||| Sbjct: 90827 ctcactcgctcgctcgctcgctc 90805
>gb|AC010711.5| Drosophila melanogaster 3L BAC RP98-22D12 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 187438 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 80 actcgctcgctcgctcgctccct 102 ||||||||||||||||||||||| Sbjct: 8243 actcgctcgctcgctcgctccct 8265
>ref|NM_133249.1| Mus musculus peroxisome proliferative activated receptor, gamma, coactivator 1 beta (Ppargc1b), mRNA Length = 3664 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgctc 99 ||||||||||||||||||||||| Sbjct: 3233 ctcactcgctcgctcgctcgctc 3211
>gb|AC091127.3| Drosophila melanogaster 3L BAC RP98-27E18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177835 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 80 actcgctcgctcgctcgctccct 102 ||||||||||||||||||||||| Sbjct: 118145 actcgctcgctcgctcgctccct 118167
>dbj|AK153993.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430019M10 product:ligase I, DNA, ATP-dependent, full insert sequence Length = 3051 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgctc 99 ||||||||||||||||||||||| Sbjct: 60 ctcactcgctcgctcgctcgctc 38
>gb|AF453324.1|AF453324 Mus musculus PPAR gamma coactivator-1beta protein mRNA, complete cds Length = 3664 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgctc 99 ||||||||||||||||||||||| Sbjct: 3233 ctcactcgctcgctcgctcgctc 3211
>dbj|AK163909.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230040J18 product:RAB23, member RAS oncogene family, full insert sequence Length = 2559 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgctc 99 ||||||||||||||||||||||| Sbjct: 1880 ctcactcgctcgctcgctcgctc 1858
>gb|AC154816.2| Mus musculus BAC clone RP24-534N1 from chromosome 13, complete sequence Length = 155476 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgctc 99 ||||||||||||||||||||||| Sbjct: 54505 ctcactcgctcgctcgctcgctc 54483
>gb|AY750995.1| Hordeum vulgare subsp. vulgare cultivar Morex VRN-H1 gene, complete cds Length = 12360 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 82 tcgctcgctcgctcgctccctgctgcc 108 |||||||||||||||||| |||||||| Sbjct: 2087 tcgctcgctcgctcgctcgctgctgcc 2113
>dbj|AK028464.1| Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched library, clone:4631412G21 product:PPAR GAMMA COACTIVATOR-1BETA PROTEIN, full insert sequence Length = 3335 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgctc 99 ||||||||||||||||||||||| Sbjct: 3283 ctcactcgctcgctcgctcgctc 3261
>dbj|AK053906.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130320A19 product:ligase I, DNA, ATP-dependent, full insert sequence Length = 692 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgctc 99 ||||||||||||||||||||||| Sbjct: 90 ctcactcgctcgctcgctcgctc 68
>dbj|AK086111.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930006M02 product:PPAR GAMMA COACTIVATOR-1BETA PROTEIN, full insert sequence Length = 3630 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgctc 99 ||||||||||||||||||||||| Sbjct: 3256 ctcactcgctcgctcgctcgctc 3234
>ref|XM_625197.1| PREDICTED: Apis mellifera similar to ENSANGP00000010151 (LOC552822), mRNA Length = 670 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 77 ctcactcgctcgctcgctcgctc 99 ||||||||||||||||||||||| Sbjct: 526 ctcactcgctcgctcgctcgctc 548
>emb|BX822140.1|CNS0A606 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB15ZG01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1579 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 286 gagctgcttttcgttagtaataaggctattttcaaacctccaaaagctatacgtggagg 344 ||||| |||||| ||| ||||||||||| |||||||| |||||| | || |||||||| Sbjct: 615 gagcttcttttcactagcaataaggctatattcaaacccccaaaatcaatgcgtggagg 673
>gb|AC144942.4| Mus musculus BAC clone RP23-402N21 from 10, complete sequence Length = 200875 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgctc 99 ||||||||||||||||||||||| Sbjct: 33524 ctcactcgctcgctcgctcgctc 33502
>emb|CR391947.13| Zebrafish DNA sequence from clone DKEYP-88A4 in linkage group 1, complete sequence Length = 167207 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgctc 99 ||||||||||||||||||||||| Sbjct: 30312 ctcactcgctcgctcgctcgctc 30290
>gb|AE003470.4| Drosophila melanogaster chromosome 3L, section 4 of 83 of the complete sequence Length = 318699 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 80 actcgctcgctcgctcgctccct 102 ||||||||||||||||||||||| Sbjct: 132792 actcgctcgctcgctcgctccct 132814
>gb|AC140416.2| Mus musculus BAC clone RP24-347A16 from 6, complete sequence Length = 188390 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 77 ctcactcgctcgctcgctcgctc 99 ||||||||||||||||||||||| Sbjct: 145020 ctcactcgctcgctcgctcgctc 145042
>gb|AC134435.3| Mus musculus BAC clone RP24-423J19 from 1, complete sequence Length = 225687 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 77 ctcactcgctcgctcgctcgctc 99 ||||||||||||||||||||||| Sbjct: 9921 ctcactcgctcgctcgctcgctc 9943
>gb|AC144783.4| Mus musculus BAC clone RP23-57A16 from 10, complete sequence Length = 246132 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgctc 99 ||||||||||||||||||||||| Sbjct: 245756 ctcactcgctcgctcgctcgctc 245734
>gb|AC131685.4| Mus musculus BAC clone RP23-372G24 from 1, complete sequence Length = 163474 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 77 ctcactcgctcgctcgctcgctc 99 ||||||||||||||||||||||| Sbjct: 22331 ctcactcgctcgctcgctcgctc 22353
>emb|AL672243.12| Mouse DNA sequence from clone RP23-343M4 on chromosome X, complete sequence Length = 184872 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgctc 99 ||||||||||||||||||||||| Sbjct: 92442 ctcactcgctcgctcgctcgctc 92420
>ref|XM_483828.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4423 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 acctcactcgctcgctcgctcgctcc 100 ||||| |||||||||||||||||||| Sbjct: 42 acctcgctcgctcgctcgctcgctcc 67
>gb|AC096997.3| Takifugu rubripes clone 217A23, complete sequence Length = 74841 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 5 cctgtcctgtcctgtcccgtcc 26 |||||||||||||||||||||| Sbjct: 27852 cctgtcctgtcctgtcccgtcc 27831 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 tgtcctgtcctgtcccgtcc 26 |||||||||||||||||||| Sbjct: 27875 tgtcctgtcctgtcccgtcc 27856
>ref|XM_604404.2| PREDICTED: Bos taurus similar to Surfeit locus protein 4 (LOC526045), mRNA Length = 3443 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 81 ctcgctcgctcgctcgctccct 102 |||||||||||||||||||||| Sbjct: 219 ctcgctcgctcgctcgctccct 198
>gb|AC125233.4| Mus musculus BAC clone RP23-9D24 from chromosome 5, complete sequence Length = 212792 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 81 ctcgctcgctcgctcgctccct 102 |||||||||||||||||||||| Sbjct: 115843 ctcgctcgctcgctcgctccct 115864
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 77 ctcactcgctcgctcgctcgct 98 |||||||||||||||||||||| Sbjct: 541099 ctcactcgctcgctcgctcgct 541120
>gb|AC159244.4| Mus musculus BAC clone RP24-309L4 from chromosome 12, complete sequence Length = 216500 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 5 cctgtcctgtcctgtcccgtcc 26 |||||||||||||||||||||| Sbjct: 54371 cctgtcctgtcctgtcccgtcc 54392
>ref|XM_751954.1| Ustilago maydis 521 hypothetical protein (UM00900.1) partial mRNA Length = 1680 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 81 ctcgctcgctcgctcgctccct 102 |||||||||||||||||||||| Sbjct: 165 ctcgctcgctcgctcgctccct 186
>gb|AC130538.4| Mus musculus BAC clone RP23-450E2 from chromosome 7, complete sequence Length = 169082 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 74 cacctcactcgctcgctcgctcgctc 99 |||||| ||||||||||||||||||| Sbjct: 101080 cacctcgctcgctcgctcgctcgctc 101105
>gb|AC122814.3| Mus musculus BAC clone RP23-234A12 from 6, complete sequence Length = 144136 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 81 ctcgctcgctcgctcgctccct 102 |||||||||||||||||||||| Sbjct: 27899 ctcgctcgctcgctcgctccct 27920
>gb|AC144503.17| Medicago truncatula clone mth2-13f22, complete sequence Length = 116810 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 393 tcatggatttgcaaggaacaag 414 |||||||||||||||||||||| Sbjct: 19962 tcatggatttgcaaggaacaag 19983
>emb|AL355933.1|NCB8B20 Neurospora crassa DNA linkage group II BAC clone B8B20 Length = 86476 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 77 ctcactcgctcgctcgctcgct 98 |||||||||||||||||||||| Sbjct: 33540 ctcactcgctcgctcgctcgct 33561
>emb|CR361560.10| Zebrafish DNA sequence from clone CH211-122G18 in linkage group 24, complete sequence Length = 184660 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 78 tcactcgctcgctcgctcgctc 99 |||||||||||||||||||||| Sbjct: 139836 tcactcgctcgctcgctcgctc 139815
>emb|BX927382.9| Zebrafish DNA sequence from clone DKEY-168I13 in linkage group 2, complete sequence Length = 57395 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgctccct 102 ||||||||||||||||||| |||||| Sbjct: 41806 ctcactcgctcgctcgctccctccct 41781
>gb|AC005341.13| Homo sapiens chromosome , clone RP11-146P2, complete sequence Length = 161449 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 312 tattttcaaacctccaaaagct 333 |||||||||||||||||||||| Sbjct: 28225 tattttcaaacctccaaaagct 28204
>gb|AC090614.5| Homo sapiens chromosome 17, clone RP11-577I13, complete sequence Length = 230956 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 312 tattttcaaacctccaaaagct 333 |||||||||||||||||||||| Sbjct: 180776 tattttcaaacctccaaaagct 180755
>dbj|AK089384.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730019F02 product:hypothetical TPR repeat containing protein, full insert sequence Length = 3715 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1 actgcctgtcctgtcctgtcccgtcc 26 ||||||||||||||||||||| |||| Sbjct: 515 actgcctgtcctgtcctgtcctgtcc 540
>gb|AC140385.3| Mus musculus BAC clone RP23-173G20 from chromosome 6, complete sequence Length = 179564 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 81 ctcgctcgctcgctcgctccct 102 |||||||||||||||||||||| Sbjct: 20568 ctcgctcgctcgctcgctccct 20547
>gb|AY190944.1| Drosophila pseudoobscura clone DPSF01_8_E17 (D1422) genomic sequence Length = 42627 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 81 ctcgctcgctcgctcgctccct 102 |||||||||||||||||||||| Sbjct: 11566 ctcgctcgctcgctcgctccct 11545 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 actcgctcgctcgctcgctc 99 |||||||||||||||||||| Sbjct: 11571 actcgctcgctcgctcgctc 11552
>emb|AL929160.11| Mouse DNA sequence from clone RP23-98B9 on chromosome 2, complete sequence Length = 107366 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 345 tataccaatctgctttcctcag 366 |||||||||||||||||||||| Sbjct: 12117 tataccaatctgctttcctcag 12096
>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0044E16 Length = 153296 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 75 acctcactcgctcgctcgctcgctcc 100 ||||| |||||||||||||||||||| Sbjct: 26865 acctcgctcgctcgctcgctcgctcc 26840
>dbj|AP004623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0705A05 Length = 143765 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 75 acctcactcgctcgctcgctcgctcc 100 ||||| |||||||||||||||||||| Sbjct: 89874 acctcgctcgctcgctcgctcgctcc 89849
>dbj|AK111235.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-F05, full insert sequence Length = 2248 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 83 cgctcgctcgctcgctccctgc 104 |||||||||||||||||||||| Sbjct: 397 cgctcgctcgctcgctccctgc 418
>dbj|AK071244.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088K02, full insert sequence Length = 4423 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 acctcactcgctcgctcgctcgctcc 100 ||||| |||||||||||||||||||| Sbjct: 42 acctcgctcgctcgctcgctcgctcc 67
>emb|AL772271.11| Mouse DNA sequence from clone RP23-17P12 on chromosome 2, complete sequence Length = 204136 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1 actgcctgtcctgtcctgtcccgtcc 26 ||||||||||||||||||||| |||| Sbjct: 188971 actgcctgtcctgtcctgtcctgtcc 188946
>gb|AC087727.35| Mus musculus strain C57BL/6J chromosome 2 clone rp23-148b16, complete sequence Length = 202336 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 345 tataccaatctgctttcctcag 366 |||||||||||||||||||||| Sbjct: 133366 tataccaatctgctttcctcag 133345
>emb|AL603867.7| Mouse DNA sequence from clone RP23-237G11 on chromosome 15, complete sequence Length = 112729 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 81 ctcgctcgctcgctcgctccct 102 |||||||||||||||||||||| Sbjct: 72278 ctcgctcgctcgctcgctccct 72257
>ref|XM_473781.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 978 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 ctcgacaaggtcgtgctccgc 210 ||||||||||||||||||||| Sbjct: 85 ctcgacaaggtcgtgctccgc 105
>gb|AC102594.15| Mus musculus chromosome 5, clone RP23-356G21, complete sequence Length = 189741 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 ctcactcgctcgctcgctcgc 97 ||||||||||||||||||||| Sbjct: 163561 ctcactcgctcgctcgctcgc 163581
>gb|AC008284.7| Drosophila melanogaster clone BACR03M22, complete sequence Length = 161996 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 cctgtcctgtcctgtcccgtc 25 ||||||||||||||||||||| Sbjct: 26238 cctgtcctgtcctgtcccgtc 26258
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 104 ctgccatcccgcggccgggca 124 ||||||||||||||||||||| Sbjct: 2333698 ctgccatcccgcggccgggca 2333718
>gb|BC061497.1| Mus musculus tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide, mRNA (cDNA clone MGC:70263 IMAGE:4949445), complete cds Length = 1741 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgc 97 ||||||||||||||||||||| Sbjct: 153 ctcactcgctcgctcgctcgc 133
>gb|AC147032.3| Pan troglodytes BAC clone RP43-98O19 from 7, complete sequence Length = 146431 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 5 cctgtcctgtcctgtcccgtcccttcccc 33 ||||||||||||||||| |||| |||||| Sbjct: 86572 cctgtcctgtcctgtcctgtcctttcccc 86544
>gb|AC146413.3| Pan troglodytes BAC clone RP43-34F2 from 7, complete sequence Length = 160890 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 5 cctgtcctgtcctgtcccgtcccttcccc 33 ||||||||||||||||| |||| |||||| Sbjct: 70429 cctgtcctgtcctgtcctgtcctttcccc 70401
>gb|AF359361.3| Gibberella zeae strain GZ3639 trichothecene gene cluster, complete sequence Length = 57840 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 7 tgtcctgtcctgtcccgtcccttccccga 35 ||||| |||||||||||||| |||||||| Sbjct: 40851 tgtcccgtcctgtcccgtcctttccccga 40823
>gb|AC161442.5| Mus musculus chromosome 5, clone RP23-384P12, complete sequence Length = 174557 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 tgtcctgtcctgtcccgtccc 27 ||||||||||||||||||||| Sbjct: 29537 tgtcctgtcctgtcccgtccc 29517
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 79 cactcgctcgctcgctcgctc 99 ||||||||||||||||||||| Sbjct: 30653509 cactcgctcgctcgctcgctc 30653529 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ctcgctcgctcgctcgctcc 100 |||||||||||||||||||| Sbjct: 32770589 ctcgctcgctcgctcgctcc 32770608 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cgctcgctcgctcgctccct 102 |||||||||||||||||||| Sbjct: 10556040 cgctcgctcgctcgctccct 10556021
>gb|AC140047.8| Mus musculus chromosome 17, clone RP23-233F10, complete sequence Length = 186632 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 ctcgctcgctcgctcgctccc 101 ||||||||||||||||||||| Sbjct: 62380 ctcgctcgctcgctcgctccc 62400
>gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 genomic sequence, complete sequence Length = 157970 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 cactcgctcgctcgctcgctc 99 ||||||||||||||||||||| Sbjct: 108883 cactcgctcgctcgctcgctc 108863
>gb|AF524894.1| Rattus norvegicus NDRG4 (Ndrg4) gene, complete cds; alternatively spliced Length = 20364 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 ctcgctcgctcgctcgctccc 101 ||||||||||||||||||||| Sbjct: 16873 ctcgctcgctcgctcgctccc 16893
>gb|AC122471.4| Mus musculus BAC clone RP24-322M5 from chromosome 2, complete sequence Length = 206592 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 ctcgctcgctcgctcgctccc 101 ||||||||||||||||||||| Sbjct: 87509 ctcgctcgctcgctcgctccc 87529
>gb|AC122203.4| Mus musculus BAC clone RP23-69J7 from 5, complete sequence Length = 269047 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgc 97 ||||||||||||||||||||| Sbjct: 162136 ctcactcgctcgctcgctcgc 162116
>gb|AC145450.4| Mus musculus strain C57BL/6J clone rp23-430i3, complete sequence Length = 208207 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 ctcgctcgctcgctcgctccc 101 ||||||||||||||||||||| Sbjct: 136937 ctcgctcgctcgctcgctccc 136917
>gb|AY231293.1| Chlamydomonas reinhardtii long flagella protein LF4 gene, complete cds Length = 9090 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 8 gtcctgtcctgtcccgtcccttccc 32 |||||||||||||||||||| |||| Sbjct: 4063 gtcctgtcctgtcccgtcccgtccc 4087
>emb|AL133270.24| Human DNA sequence from clone RP4-810F7 on chromosome 6 Contains a ferritin pseudogene, complete sequence Length = 87789 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 cactcgctcgctcgctcgctc 99 ||||||||||||||||||||| Sbjct: 87717 cactcgctcgctcgctcgctc 87697
>gb|AC160391.2| Mus musculus BAC clone RP24-235G7 from chromosome 12, complete sequence Length = 186582 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 82 tcgctcgctcgctcgctccct 102 ||||||||||||||||||||| Sbjct: 170387 tcgctcgctcgctcgctccct 170367
>gb|AC153993.23| Mus musculus 6 BAC RP24-568N16 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 188187 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 tcatggatttgcaaggaacaa 413 ||||||||||||||||||||| Sbjct: 37222 tcatggatttgcaaggaacaa 37202
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 190 ctcgacaaggtcgtgctccgc 210 ||||||||||||||||||||| Sbjct: 100785 ctcgacaaggtcgtgctccgc 100805
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 421 actgttgacactgatccacca 441 ||||||||||||||||||||| Sbjct: 2221782 actgttgacactgatccacca 2221762
>gb|AF336366.2| Gibberella zeae H-11 trichothecene biosynthesis gene cluster, complete sequence Length = 27022 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 7 tgtcctgtcctgtcccgtcccttccccga 35 ||||| |||||||||||||| |||||||| Sbjct: 23351 tgtcccgtcctgtcccgtcctttccccga 23323
>dbj|AK144999.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN full-length enriched library, clone:G830022H20 product:unclassifiable, full insert sequence Length = 5443 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 ctcgctcgctcgctcgctccc 101 ||||||||||||||||||||| Sbjct: 54 ctcgctcgctcgctcgctccc 34
>dbj|AK149224.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN full-length enriched library, clone:7120495K24 product:tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide, full insert sequence Length = 1729 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgc 97 ||||||||||||||||||||| Sbjct: 179 ctcactcgctcgctcgctcgc 159
>gb|AC018422.9| Homo sapiens, clone RP11-19G4, complete sequence Length = 157508 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 260 catcatggaaagatcagtttg 280 ||||||||||||||||||||| Sbjct: 103405 catcatggaaagatcagtttg 103385
>dbj|AK168520.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920029D19 product:tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide, full insert sequence Length = 1620 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgc 97 ||||||||||||||||||||| Sbjct: 71 ctcactcgctcgctcgctcgc 51
>dbj|AK169035.1| Mus musculus 16 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920076B22 product:tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide, full insert sequence Length = 1614 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgc 97 ||||||||||||||||||||| Sbjct: 60 ctcactcgctcgctcgctcgc 40
>dbj|AK077596.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730463B15 product:14-3-3 ETA CHAIN, full insert sequence Length = 1626 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgc 97 ||||||||||||||||||||| Sbjct: 72 ctcactcgctcgctcgctcgc 52
>dbj|AK083936.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length enriched library, clone:D130065E11 product:hypothetical 14-3-3 proteins containing protein, full insert sequence Length = 2184 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgc 97 ||||||||||||||||||||| Sbjct: 148 ctcactcgctcgctcgctcgc 128
>dbj|AK045739.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230308O16 product:unclassifiable, full insert sequence Length = 2487 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 tcatggatttgcaaggaacaa 413 ||||||||||||||||||||| Sbjct: 289 tcatggatttgcaaggaacaa 269
>gb|AC010590.7|AC010590 Homo sapiens chromosome 5 clone CTC-441F14, complete sequence Length = 92602 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 350 caatctgctttcctcagttttccaa 374 |||||||||||||||||| |||||| Sbjct: 66657 caatctgctttcctcagtcttccaa 66681
>gb|AC025262.27|AC025262 Homo sapiens 12 BAC RP11-629N8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167276 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 ctcgctcgctcgctcgctccc 101 ||||||||||||||||||||| Sbjct: 18819 ctcgctcgctcgctcgctccc 18799
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 79 cactcgctcgctcgctcgctc 99 ||||||||||||||||||||| Sbjct: 30744931 cactcgctcgctcgctcgctc 30744951 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ctcgctcgctcgctcgctcc 100 |||||||||||||||||||| Sbjct: 32861099 ctcgctcgctcgctcgctcc 32861118 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cgctcgctcgctcgctccct 102 |||||||||||||||||||| Sbjct: 10554141 cgctcgctcgctcgctccct 10554122
>gb|AC007946.6|AC007946 Drosophila melanogaster, chromosome 3R, region 96E-96F, BAC clone BACR03O03, complete sequence Length = 132168 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 cctgtcctgtcctgtcccgtc 25 ||||||||||||||||||||| Sbjct: 18510 cctgtcctgtcctgtcccgtc 18490
>dbj|AB063572.2| Mus musculus 14-3-3 eta gene for 14-3-3 eta chain, complete cds Length = 3420 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgc 97 ||||||||||||||||||||| Sbjct: 1677 ctcactcgctcgctcgctcgc 1657
>gb|AC158653.7| Mus musculus 6 BAC RP23-418F10 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 185818 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 actgcctgtcctgtcctgtcc 21 ||||||||||||||||||||| Sbjct: 71239 actgcctgtcctgtcctgtcc 71259
>gb|AC011361.4|AC011361 Homo sapiens chromosome 5 clone CTC-482N19, complete sequence Length = 189893 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 350 caatctgctttcctcagttttccaa 374 |||||||||||||||||| |||||| Sbjct: 12160 caatctgctttcctcagtcttccaa 12184
>dbj|AK193211.1| Mus musculus cDNA, clone:Y1G0111H05, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000063338, based on BLAT search Length = 238 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgc 97 ||||||||||||||||||||| Sbjct: 62 ctcactcgctcgctcgctcgc 42
>gb|AY103899.1| Zea mays PCO074294 mRNA sequence Length = 1076 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 ctcgctcgctcgctcgctccc 101 ||||||||||||||||||||| Sbjct: 196 ctcgctcgctcgctcgctccc 216
>gb|AE003752.2| Drosophila melanogaster chromosome 3R, section 90 of 118 of the complete sequence Length = 188285 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 cctgtcctgtcctgtcccgtc 25 ||||||||||||||||||||| Sbjct: 29024 cctgtcctgtcctgtcccgtc 29004
>dbj|AP001698.1| Homo sapiens genomic DNA, chromosome 21q, section 42/105 Length = 340000 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 ctcgctcgctcgctcgctccc 101 ||||||||||||||||||||| Sbjct: 328245 ctcgctcgctcgctcgctccc 328225
>emb|CR627488.8| Zebrafish DNA sequence from clone CH211-242B23 in linkage group 10, complete sequence Length = 137433 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 cctgtcctgtcctgtcccgtc 25 ||||||||||||||||||||| Sbjct: 5600 cctgtcctgtcctgtcccgtc 5620
>gb|AC144818.4| Mus musculus BAC clone RP23-97O1 from chromosome 5, complete sequence Length = 213322 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 5 cctgtcctgtcctgtcccgtccctt 29 ||||||||||||||||| ||||||| Sbjct: 47586 cctgtcctgtcctgtcctgtccctt 47562
>emb|AL732309.9| Mouse DNA sequence from clone RP23-132N23 on chromosome 2, complete sequence Length = 221859 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 ctcgctcgctcgctcgctccc 101 ||||||||||||||||||||| Sbjct: 72848 ctcgctcgctcgctcgctccc 72828
>gb|DQ063404.1| Crocodylus moreletii Chompy miniature inverted-repeat transposable element, partial sequence Length = 832 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 tgtcctgtcctgtcccgtccc 27 ||||||||||||||||||||| Sbjct: 630 tgtcctgtcctgtcccgtccc 610
>gb|AC153996.3| Mus musculus 6 BAC RP24-385J11 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 155517 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 393 tcatggatttgcaaggaacaa 413 ||||||||||||||||||||| Sbjct: 6524 tcatggatttgcaaggaacaa 6544
>dbj|D87661.1| Mus musculus mRNA for 14-3-3 eta, complete cds Length = 1098 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ctcactcgctcgctcgctcgc 97 ||||||||||||||||||||| Sbjct: 141 ctcactcgctcgctcgctcgc 121
>dbj|AP001604.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1648B8, APP-D21S292 region, complete sequence Length = 186930 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 ctcgctcgctcgctcgctccc 101 ||||||||||||||||||||| Sbjct: 17032 ctcgctcgctcgctcgctccc 17012
>gb|AC117698.19| Mus musculus chromosome 5, clone RP23-451A12, complete sequence Length = 180809 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 5 cctgtcctgtcctgtcccgtcccttccc 32 ||||||||||||||||| ||||| |||| Sbjct: 6517 cctgtcctgtcctgtcctgtcccatccc 6490 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 cctgtcctgtcctgtcccgtccct 28 |||||||||||||||||| ||||| Sbjct: 6512 cctgtcctgtcctgtcccatccct 6489
>gb|AC160972.4| Mus musculus BAC clone RP24-571D21 from chromosome 12, complete sequence Length = 184921 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 gtcctgtcctgtcccgtccc 27 |||||||||||||||||||| Sbjct: 36695 gtcctgtcctgtcccgtccc 36676
>gb|AC168212.7| Mus musculus chromosome 18, clone RP23-290N19, complete sequence Length = 197719 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ctcgctcgctcgctcgctcc 100 |||||||||||||||||||| Sbjct: 152920 ctcgctcgctcgctcgctcc 152939
>gb|AC124828.14| Mus musculus chromosome 5, clone RP24-126A19, complete sequence Length = 188504 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 79 cactcgctcgctcgctcgctccct 102 |||||||||||| ||||||||||| Sbjct: 17524 cactcgctcgcttgctcgctccct 17501
>ref|XM_450710.1| Oryza sativa (japonica cultivar-group), mRNA Length = 408 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 actcgctcgctcgctcgctc 99 |||||||||||||||||||| Sbjct: 152 actcgctcgctcgctcgctc 171
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 atgtcgtcgtcgggggccgg 143 |||||||||||||||||||| Sbjct: 3095254 atgtcgtcgtcgggggccgg 3095235
>gb|AC153856.23| Mus musculus 10 BAC RP23-468J15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188027 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ctctctcctcacatccacct 78 |||||||||||||||||||| Sbjct: 98137 ctctctcctcacatccacct 98156
>gb|AC129588.10| Mus musculus chromosome 3, clone RP23-296L7, complete sequence Length = 180845 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 cctgtcctgtcctgtcccgtccct 28 ||||||||||||||||| |||||| Sbjct: 92185 cctgtcctgtcctgtcctgtccct 92208
>gb|AC163207.6| Mus musculus chromosome 1, clone RP24-137J11, complete sequence Length = 169102 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ctcgctcgctcgctcgctcc 100 |||||||||||||||||||| Sbjct: 142061 ctcgctcgctcgctcgctcc 142080 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 cctcactcgctcgctcgctcgctc 99 |||| ||||||||||||||||||| Sbjct: 142052 cctcgctcgctcgctcgctcgctc 142075
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ctcgctcgctcgctcgctcc 100 |||||||||||||||||||| Sbjct: 215965 ctcgctcgctcgctcgctcc 215984
>gb|AC120533.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0081F16 map E50055S, complete sequence Length = 148220 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ctcgctcgctcgctcgctcc 100 |||||||||||||||||||| Sbjct: 47981 ctcgctcgctcgctcgctcc 47962
>gb|AC115060.9| Mus musculus chromosome 1, clone RP24-395F2, complete sequence Length = 172482 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ctcgctcgctcgctcgctcc 100 |||||||||||||||||||| Sbjct: 13998 ctcgctcgctcgctcgctcc 14017 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 cctcactcgctcgctcgctcgctc 99 |||| ||||||||||||||||||| Sbjct: 13989 cctcgctcgctcgctcgctcgctc 14012
>gb|AC155163.4| Mus musculus BAC clone RP24-341A18 from chromosome 8, complete sequence Length = 207406 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 cctcactcgctcgctcgctcgctc 99 |||||| ||||||||||||||||| Sbjct: 102175 cctcacacgctcgctcgctcgctc 102152 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ctcgctcgctcgctcgctcc 100 |||||||||||||||||||| Sbjct: 102166 ctcgctcgctcgctcgctcc 102147
>gb|AC150550.1| Drosophila melanogaster clone BACR21G13, complete sequence Length = 173358 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 439 ccaccatttccagtaccgatctct 462 ||||||||||||| |||||||||| Sbjct: 117072 ccaccatttccagaaccgatctct 117049
>gb|AC092076.7| Oryza sativa chromosome 3 BAC OSJNBb0021G19 genomic sequence, complete sequence Length = 141582 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ctcgctcgctcgctcgctcc 100 |||||||||||||||||||| Sbjct: 108952 ctcgctcgctcgctcgctcc 108933
>gb|AC101956.5| Mus musculus chromosome 5, clone RP24-166L23, complete sequence Length = 183807 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ctcgctcgctcgctcgctcc 100 |||||||||||||||||||| Sbjct: 84626 ctcgctcgctcgctcgctcc 84607
>gb|AC122556.15| Mus musculus chromosome 12, clone RP24-352D3, complete sequence Length = 167088 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 cctgtcctgtcctgtcccgtccct 28 ||||||||||||||||| |||||| Sbjct: 1992 cctgtcctgtcctgtcctgtccct 1969
>gb|AC136524.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0474A01, complete sequence Length = 140077 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 tctctctcctcacatccacctcac 81 ||||||||||| |||||||||||| Sbjct: 78487 tctctctcctctcatccacctcac 78510
>ref|NM_199121.1| Homo sapiens von Willebrand factor A domain containing 1 (VWA1), transcript variant 2, mRNA Length = 2159 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 actcgctcgctcgctcgctc 99 |||||||||||||||||||| Sbjct: 191 actcgctcgctcgctcgctc 172
>ref|NM_022834.3| Homo sapiens von Willebrand factor A domain containing 1 (VWA1), transcript variant 1, mRNA Length = 2554 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 actcgctcgctcgctcgctc 99 |||||||||||||||||||| Sbjct: 191 actcgctcgctcgctcgctc 172
>gb|BC040384.1| Mus musculus stearoyl-Coenzyme A desaturase 2, mRNA (cDNA clone MGC:25381 IMAGE:3155869), complete cds Length = 5043 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ctcgctcgctcgctcgctcc 100 |||||||||||||||||||| Sbjct: 4014 ctcgctcgctcgctcgctcc 4033
>ref|NM_001017966.2| Mus musculus DNA-damage inducible protein 2 (Ddi2), mRNA Length = 3539 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ctcgctcgctcgctcgctcc 100 |||||||||||||||||||| Sbjct: 111 ctcgctcgctcgctcgctcc 92
>ref|NM_009128.1| Mus musculus stearoyl-Coenzyme A desaturase 2 (Scd2), mRNA Length = 5032 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ctcgctcgctcgctcgctcc 100 |||||||||||||||||||| Sbjct: 4021 ctcgctcgctcgctcgctcc 4040
>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01, complete sequence Length = 147704 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ctcgctcgctcgctcgctcc 100 |||||||||||||||||||| Sbjct: 60175 ctcgctcgctcgctcgctcc 60194
>gb|AC135809.4| Mus musculus BAC clone RP23-353F16 from chromosome 7, complete sequence Length = 195041 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 gatctggactgttgacactg 433 |||||||||||||||||||| Sbjct: 56886 gatctggactgttgacactg 56905
>gb|AC161765.5| Mus musculus BAC clone RP23-85I5 from chromosome 8, complete sequence Length = 219629 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 cctcactcgctcgctcgctcgctc 99 |||||| ||||||||||||||||| Sbjct: 24871 cctcacacgctcgctcgctcgctc 24848 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ctcgctcgctcgctcgctcc 100 |||||||||||||||||||| Sbjct: 24862 ctcgctcgctcgctcgctcc 24843
>ref|XM_850022.1| PREDICTED: Canis familiaris similar to Ferritin heavy chain (Ferritin H subunit) (LOC612281), mRNA Length = 579 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 cctcactcgctcgctcgctcgctc 99 |||| ||||||||||||||||||| Sbjct: 453 cctcgctcgctcgctcgctcgctc 430
>gb|DQ157859.1| Physcomitrella patens subsp. patens sucrose-phosphate synthase 2 mRNA, complete cds Length = 3930 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ctcgctcgctcgctcgctcc 100 |||||||||||||||||||| Sbjct: 264 ctcgctcgctcgctcgctcc 245
>emb|CT010587.5| Mouse DNA sequence from clone RP23-307A6 on chromosome 17, complete sequence Length = 173949 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 81 ctcgctcgctcgctcgctccctgc 104 ||||||||||||||||||| |||| Sbjct: 33697 ctcgctcgctcgctcgctctctgc 33720
>emb|CR381553.13| Zebrafish DNA sequence from clone CH211-154P8 in linkage group 14, complete sequence Length = 145320 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 77 ctcactcgctcgctcgctcgctccctgc 104 ||||||| ||||||||||| |||||||| Sbjct: 104534 ctcactcactcgctcgctcactccctgc 104561
>gb|AC122442.4| Mus musculus BAC clone RP24-230D14 from chromosome 19, complete sequence Length = 180516 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 cctgtcctgtcctgtcccgtccct 28 ||||||||||||||||| |||||| Sbjct: 122816 cctgtcctgtcctgtcctgtccct 122839
>gb|AC125122.4| Mus musculus BAC clone RP24-269O4 from chromosome 18, complete sequence Length = 173614 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 cctgtcctgtcctgtcccgtccct 28 ||||||||||||||||| |||||| Sbjct: 76853 cctgtcctgtcctgtcctgtccct 76830
>gb|AC125065.3| Mus musculus BAC clone RP23-430G6 from chromosome 5, complete sequence Length = 205734 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 cctgtcctgtcctgtcccgtccct 28 |||||||||||||||||| ||||| Sbjct: 17814 cctgtcctgtcctgtcccatccct 17837 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 5 cctgtcctgtcctgtcccgtcccttccc 32 ||||||||||||||||| ||||| |||| Sbjct: 17809 cctgtcctgtcctgtcctgtcccatccc 17836
>gb|BC052875.1| Mus musculus PERQ amino acid rich, with GYF domain 1, mRNA (cDNA clone IMAGE:30047829), containing frame-shift errors Length = 2692 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cactcgctcgctcgctcgct 98 |||||||||||||||||||| Sbjct: 2431 cactcgctcgctcgctcgct 2412
>gb|BC018566.1| Mus musculus PERQ amino acid rich, with GYF domain 1, mRNA (cDNA clone IMAGE:4210646) Length = 1377 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cactcgctcgctcgctcgct 98 |||||||||||||||||||| Sbjct: 1117 cactcgctcgctcgctcgct 1098
>gb|AC104231.10| Homo sapiens chromosome 15, clone RP11-96H23, complete sequence Length = 81256 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cgctcgctcgctcgctccct 102 |||||||||||||||||||| Sbjct: 66307 cgctcgctcgctcgctccct 66326
>gb|AC122026.3| Mus musculus BAC clone RP24-390D21 from chromosome 1, complete sequence Length = 205642 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 cctcactcgctcgctcgctcgctc 99 |||| ||||||||||||||||||| Sbjct: 170948 cctcgctcgctcgctcgctcgctc 170971 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 72 tccacctcactcgctcgctcgctcgctc 99 |||| ||| ||||||||||||||||||| Sbjct: 170940 tccatctccctcgctcgctcgctcgctc 170967
>gb|AC123853.2| Mus musculus BAC clone RP23-326J1 from chromosome 19, complete sequence Length = 205768 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ctcgctcgctcgctcgctcc 100 |||||||||||||||||||| Sbjct: 87199 ctcgctcgctcgctcgctcc 87218
>gb|AC122804.4| Mus musculus BAC clone RP23-296J10 from 6, complete sequence Length = 205659 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 tgcctgtcctgtcctgtcccgtcc 26 ||||||||||||||||||| |||| Sbjct: 80280 tgcctgtcctgtcctgtcctgtcc 80303
>gb|AC117240.4| Mus musculus BAC clone RP24-140F3 from 12, complete sequence Length = 171990 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 cctgtcctgtcctgtcccgtccct 28 ||||||||||||||||| |||||| Sbjct: 37549 cctgtcctgtcctgtcctgtccct 37526
>gb|AC110302.4| Mus musculus BAC clone RP24-194G21 from 12, complete sequence Length = 168601 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cgctcgctcgctcgctccct 102 |||||||||||||||||||| Sbjct: 130387 cgctcgctcgctcgctccct 130368
>gb|AC098715.3| Mus musculus BAC clone RP23-2D23 from 7, complete sequence Length = 247835 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 cctgtcctgtcctgtcccgtccct 28 ||||||||||||||||| |||||| Sbjct: 143472 cctgtcctgtcctgtcctgtccct 143495
>gb|BC040275.1| Homo sapiens Ras protein-specific guanine nucleotide-releasing factor 1, mRNA (cDNA clone MGC:35460 IMAGE:5192914), complete cds Length = 3950 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cgctcgctcgctcgctccct 102 |||||||||||||||||||| Sbjct: 175 cgctcgctcgctcgctccct 156
>gb|AC152503.5| Mus musculus BAC clone RP23-190G10 from chromosome 16, complete sequence Length = 204940 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 ctgcctgtcctgtcctgtcc 21 |||||||||||||||||||| Sbjct: 135219 ctgcctgtcctgtcctgtcc 135200
>gb|BC021415.1| Mus musculus cDNA clone IMAGE:5004537, **** WARNING: chimeric clone **** Length = 3533 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ctcgctcgctcgctcgctcc 100 |||||||||||||||||||| Sbjct: 92 ctcgctcgctcgctcgctcc 73
>gb|AY176042.1| Mus musculus Grb10 interacting GYF protein 1 mRNA, complete cds Length = 3598 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cactcgctcgctcgctcgct 98 |||||||||||||||||||| Sbjct: 3346 cactcgctcgctcgctcgct 3327
>emb|AL450468.6| Human DNA sequence from clone RP11-195M16 on chromosome 1 Contains the 3' end of a novel gene, a novel gene and the CSF1 gene for colony stimulating factor 1 (macrophage), complete sequence Length = 116796 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 76 cctcactcgctcgctcgctcgctccctgctgc 107 |||| |||||||||||||||||| ||||||| Sbjct: 67551 cctcgctcgctcgctcgctcgctggctgctgc 67520
>emb|AL391244.11| Human DNA sequence from clone RP4-758J18 on chromosome 1p36.31-36.33 Contains the 5' end of a novel gene, the CCNL2 gene for cyclin L2, the MRPL20 gene for mitochondrial ribosomal protein L20, nine novel genes and three CpG islands, complete sequence Length = 67923 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 actcgctcgctcgctcgctc 99 |||||||||||||||||||| Sbjct: 21353 actcgctcgctcgctcgctc 21372
>emb|AL160279.21| Human DNA sequence from clone RP11-65B23 on chromosome 9 Contains the 3' end of the DAPK1 gene for death-associated protein kinase 1, the CTSL gene for cathepsin L, a ,eukaryotic translation initiation factor 3, subunit 1 alpha, 35kDa (EIF3S1) pseudogene, a cathepsin pseudogene and two CpG islands, complete sequence Length = 170240 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 caatctgctttcctcagttt 369 |||||||||||||||||||| Sbjct: 114437 caatctgctttcctcagttt 114418
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 552 acttggacctggtggagatc 571 |||||||||||||||||||| Sbjct: 1363105 acttggacctggtggagatc 1363124
>emb|AL137003.12| Human DNA sequence from clone RP1-151F17 on chromosome 6 Contains the 3' end of the SCA1 gene for spinocerebellar ataxia 1n(olivopontocerebellar ataxia 1, autosomal dominant, ataxin 1), complete sequence Length = 113802 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ctcgctcgctcgctcgctcc 100 |||||||||||||||||||| Sbjct: 86766 ctcgctcgctcgctcgctcc 86785
>emb|AL135790.7| Human DNA sequence from clone RP11-87N24 on chromosome 9p22.1-23 Contains a ribosomal protein S12 (RPS12) pseudogene, 2 novel genes, the 5' end of a variant of the PTPRD gene for protein tyrosine phosphatase, receptor type, D (HPTP, PTPD, HPTPD). and a CpG island, complete sequence Length = 176273 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cactcgctcgctcgctcgct 98 |||||||||||||||||||| Sbjct: 136067 cactcgctcgctcgctcgct 136086
>gb|AY322482.1| Bos taurus c-Fos (c-fos) mRNA, complete cds Length = 1443 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 ctcgctcgctcgctcgctccctgc 104 ||||||||||||||||||| |||| Sbjct: 52 ctcgctcgctcgctcgctcgctgc 29
>emb|AL008732.1|HS67M12 Human DNA sequence from clone RP1-67M12 on chromosome 6p22.1-22.3 Contains part of a novel gene, complete sequence Length = 103268 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 612 aaagccattctcttttacct 631 |||||||||||||||||||| Sbjct: 16285 aaagccattctcttttacct 16266
>emb|CR378672.1| Photobacterium profundum SS9; segment 10/12 Length = 348526 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 471 ttacatcgatttaatccttaaacc 494 ||||||||||| |||||||||||| Sbjct: 45115 ttacatcgattgaatccttaaacc 45138
>emb|AL606521.24| Mouse DNA sequence from clone RP23-280J3 on chromosome 11 Contains the 5' end of the Mtmr3 gene for myotubularin related protein 3, two novel genes, the gene for a novel protein similar to human ASC-1 complex subunit P100, the gene for a novel protein similar to human ubiquinol-cytochrome C reductase complex 7.2 kDa protein UQCR10, the Cabp7 gene for calcium binding protein 7, the 3' end of the Nf2 gene for neurofibromatosis 2 and two CpG islands, complete sequence Length = 233997 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 cctcactcgctcgctcgctcgctc 99 ||||||||||||||||||| |||| Sbjct: 164919 cctcactcgctcgctcgcttgctc 164942
>emb|CR377229.8| Zebrafish DNA sequence from clone CH211-273M23 in linkage group 17, complete sequence Length = 142019 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cgctcgctcgctcgctccct 102 |||||||||||||||||||| Sbjct: 114729 cgctcgctcgctcgctccct 114710
>gb|AC026634.11| Homo sapiens chromosome , clone RP11-639E23, complete sequence Length = 164858 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 tcctgtcctgtcccgtcccttccc 32 ||||||||||||||||||| |||| Sbjct: 5535 tcctgtcctgtcccgtcccgtccc 5512
>gb|BC021117.1| Homo sapiens colony stimulating factor 1 (macrophage), transcript variant 1, mRNA (cDNA clone MGC:31930 IMAGE:4586312), complete cds Length = 2851 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 76 cctcactcgctcgctcgctcgctccctgctgc 107 |||| |||||||||||||||||| ||||||| Sbjct: 153 cctcgctcgctcgctcgctcgctggctgctgc 122
>gb|AC083807.17| Homo sapiens 12 BAC RP11-775A14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 123587 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 ctgctttcctcagttttcca 373 |||||||||||||||||||| Sbjct: 77803 ctgctttcctcagttttcca 77822
>gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0036G02, from chromosome 3, complete sequence Length = 153308 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cgctcgctcgctcgctccct 102 |||||||||||||||||||| Sbjct: 111853 cgctcgctcgctcgctccct 111834
>dbj|AK220289.1| Mus musculus mRNA for mKIAA4110 protein Length = 2633 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cactcgctcgctcgctcgct 98 |||||||||||||||||||| Sbjct: 2339 cactcgctcgctcgctcgct 2320
>gb|AC115458.5| Rattus norvegicus 13 BAC CH230-190J23 (Children's Hospital Oakland Research Institute) complete sequence Length = 69404 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 cctcactcgctcgctcgctcgctc 99 |||| ||||||||||||||||||| Sbjct: 52945 cctcgctcgctcgctcgctcgctc 52922
>dbj|AK128149.1| Homo sapiens cDNA FLJ46272 fis, clone TESTI4028692 Length = 3666 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 ctgctttcctcagttttcca 373 |||||||||||||||||||| Sbjct: 3124 ctgctttcctcagttttcca 3105
>dbj|AK075366.1| Homo sapiens cDNA PSEC0053 fis, clone NT2RP2000396, weakly similar to COLLAGEN ALPHA 1(XII) CHAIN PRECURSOR Length = 2366 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 actcgctcgctcgctcgctc 99 |||||||||||||||||||| Sbjct: 20 actcgctcgctcgctcgctc 1
>gb|AC027285.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-40I5, complete sequence Length = 241886 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cgctcgctcgctcgctccct 102 |||||||||||||||||||| Sbjct: 228499 cgctcgctcgctcgctccct 228518
>gb|AC113344.2| Homo sapiens chromosome 5 clone CTD-2382P15, complete sequence Length = 128990 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 cctgtcctgtcctgtcccgtccct 28 ||||||||||||||||| |||||| Sbjct: 16421 cctgtcctgtcctgtcctgtccct 16444
>gb|AC153836.5| Mus musculus 6 BAC RP23-479D21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 231946 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cgctcgctcgctcgctccct 102 |||||||||||||||||||| Sbjct: 168741 cgctcgctcgctcgctccct 168760
>gb|AC007550.70| Mus musculus strain 129S6/SvEvTac chromosome 11a2 clone rp21-434h10, complete sequence Length = 199956 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 cctcactcgctcgctcgctcgctc 99 ||||||||||||||||||| |||| Sbjct: 134531 cctcactcgctcgctcgcttgctc 134508
>dbj|AK136957.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430011C17 product:unclassifiable, full insert sequence Length = 2724 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ctcgctcgctcgctcgctcc 100 |||||||||||||||||||| Sbjct: 120 ctcgctcgctcgctcgctcc 139
>gb|AC010853.11| Homo sapiens chromosome 18, clone RP11-349D12, complete sequence Length = 184396 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 tcctgtcctgtcccgtcccttccc 32 ||||||||||||||||||| |||| Sbjct: 167594 tcctgtcctgtcccgtcccgtccc 167571
>dbj|AK147406.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN full-length enriched library, clone:M5C1034F16 product:stearoyl-Coenzyme A desaturase 2, full insert sequence Length = 5452 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ctcgctcgctcgctcgctcc 100 |||||||||||||||||||| Sbjct: 4442 ctcgctcgctcgctcgctcc 4461
>ref|NM_172210.1| Homo sapiens colony stimulating factor 1 (macrophage) (CSF1), transcript variant 2, mRNA Length = 1519 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 76 cctcactcgctcgctcgctcgctccctgctgc 107 |||| |||||||||||||||||| ||||||| Sbjct: 153 cctcgctcgctcgctcgctcgctggctgctgc 122
>ref|NM_000757.3| Homo sapiens colony stimulating factor 1 (macrophage) (CSF1), transcript variant 1, mRNA Length = 2749 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 76 cctcactcgctcgctcgctcgctccctgctgc 107 |||| |||||||||||||||||| ||||||| Sbjct: 153 cctcgctcgctcgctcgctcgctggctgctgc 122
>ref|NM_172211.1| Homo sapiens colony stimulating factor 1 (macrophage) (CSF1), transcript variant 3, mRNA Length = 1855 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 76 cctcactcgctcgctcgctcgctccctgctgc 107 |||| |||||||||||||||||| ||||||| Sbjct: 153 cctcgctcgctcgctcgctcgctggctgctgc 122
>ref|NM_172212.1| Homo sapiens colony stimulating factor 1 (macrophage) (CSF1), transcript variant 4, mRNA Length = 2545 Score = 40.1 bits (20), Expect = 8.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 76 cctcactcgctcgctcgctcgctccctgctgc 107 |||| |||||||||||||||||| ||||||| Sbjct: 153 cctcgctcgctcgctcgctcgctggctgctgc 122
>dbj|AK133698.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330440L02 product:Eph receptor A5, full insert sequence Length = 2463 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ctcgctcgctcgctcgctcc 100 |||||||||||||||||||| Sbjct: 28 ctcgctcgctcgctcgctcc 9
>dbj|AK137686.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched library, clone:9930033B11 product:trans-acting transcription factor 6, full insert sequence Length = 3599 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 cctcactcgctcgctcgctcgctc 99 |||| ||||||||||||||||||| Sbjct: 33 cctcgctcgctcgctcgctcgctc 56
>dbj|AK158213.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930043C05 product:RAS-homolog enriched in brain, full insert sequence Length = 4168 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ctcgctcgctcgctcgctcc 100 |||||||||||||||||||| Sbjct: 61 ctcgctcgctcgctcgctcc 42
>gb|AC069082.9| Homo sapiens chromosome 15, clone RP11-716C8, complete sequence Length = 163533 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 cgctcgctcgctcgctccct 102 |||||||||||||||||||| Sbjct: 27698 cgctcgctcgctcgctccct 27717
>dbj|AK159413.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420019J18 product:stearoyl-Coenzyme A desaturase 2, full insert sequence Length = 2165 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ctcgctcgctcgctcgctcc 100 |||||||||||||||||||| Sbjct: 1157 ctcgctcgctcgctcgctcc 1176
>gb|AC027271.7| Homo sapiens BAC clone RP11-365H22 from 4, complete sequence Length = 177985 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cgctcgctcgctcgctccct 102 |||||||||||||||||||| Sbjct: 49729 cgctcgctcgctcgctccct 49710
>gb|AC008256.5| Drosophila melanogaster, chromosome 2R, region 41C-41E, BAC clone BACR11B14, complete sequence Length = 174999 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 439 ccaccatttccagtaccgatctct 462 ||||||||||||| |||||||||| Sbjct: 102606 ccaccatttccagaaccgatctct 102583
>dbj|AK151213.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830026O08 product:RAS-homolog enriched in brain, full insert sequence Length = 1135 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ctcgctcgctcgctcgctcc 100 |||||||||||||||||||| Sbjct: 22 ctcgctcgctcgctcgctcc 3
>gb|AC084838.7| Homo sapiens chromosome 8, clone CTD-2023J5, complete sequence Length = 183693 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 tcctgtcctgtcccgtcccttccc 32 |||||||||||||| ||||||||| Sbjct: 53360 tcctgtcctgtcccttcccttccc 53383
>gb|AC134763.4| Rattus norvegicus BAC CH230-221M14 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 222524 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 cgctcgctcgctccctgctg 106 |||||||||||||||||||| Sbjct: 153998 cgctcgctcgctccctgctg 154017
>emb|BX005169.18| Zebrafish DNA sequence from clone CH211-81D10 in linkage group 14, complete sequence Length = 164868 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 76 cctcactcgctcgctcgctcgctc 99 |||| ||||||||||||||||||| Sbjct: 97128 cctcgctcgctcgctcgctcgctc 97151
>gb|AC026704.5| Homo sapiens chromosome 5 clone CTD-2036P8, complete sequence Length = 89677 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ctcgctcgctcgctcgctcc 100 |||||||||||||||||||| Sbjct: 66398 ctcgctcgctcgctcgctcc 66417
>emb|BX548163.15| Zebrafish DNA sequence from clone CH211-135J7 in linkage group 10, complete sequence Length = 132400 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 cctgtcctgtcctgtcccgt 24 |||||||||||||||||||| Sbjct: 129509 cctgtcctgtcctgtcccgt 129528
>gb|AC159296.2| Mus musculus BAC clone RP23-278O17 from chromosome 12, complete sequence Length = 194140 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cgctcgctcgctcgctccct 102 |||||||||||||||||||| Sbjct: 19944 cgctcgctcgctcgctccct 19925
>dbj|AK049740.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530046A01 product:Eph receptor A5, full insert sequence Length = 2249 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ctcgctcgctcgctcgctcc 100 |||||||||||||||||||| Sbjct: 31 ctcgctcgctcgctcgctcc 12
>dbj|AK034289.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched library, clone:9330174B07 product:Eph receptor A5, full insert sequence Length = 2930 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ctcgctcgctcgctcgctcc 100 |||||||||||||||||||| Sbjct: 31 ctcgctcgctcgctcgctcc 12
>dbj|AK048161.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130038E07 product:RAS-homolog enriched in brain, full insert sequence Length = 2606 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ctcgctcgctcgctcgctcc 100 |||||||||||||||||||| Sbjct: 238 ctcgctcgctcgctcgctcc 219
>gb|AC155656.10| Mus musculus 6 BAC RP24-67I3 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 162118 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ctctctcctcacatccacct 78 |||||||||||||||||||| Sbjct: 40965 ctctctcctcacatccacct 40984
>dbj|AK078543.1| Mus musculus 12 days embryo female mullerian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6820444A14 product:stearoyl-Coenzyme A desaturase 2, full insert sequence Length = 1850 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ctcgctcgctcgctcgctcc 100 |||||||||||||||||||| Sbjct: 845 ctcgctcgctcgctcgctcc 864
>emb|AL115134.1|CNS01C6E Botrytis cinerea strain T4 cDNA library Length = 696 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 cctgtcctgtcctgtcccgtccct 28 ||||||||||||||||| |||||| Sbjct: 556 cctgtcctgtcctgtcctgtccct 533 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,108,595 Number of Sequences: 3902068 Number of extensions: 5108595 Number of successful extensions: 109240 Number of sequences better than 10.0: 311 Number of HSP's better than 10.0 without gapping: 315 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 107217 Number of HSP's gapped (non-prelim): 1661 length of query: 634 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 611 effective length of database: 17,143,297,704 effective search space: 10474554897144 effective search space used: 10474554897144 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
