ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bart54b03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ATG1_KLULA (Q6CSX2) Serine/threonine-protein kinase ATG1 (EC 2.7... 32 1.2
2ARGJ_PSYAR (Q4FSF9) Arginine biosynthesis bifunctional protein a... 29 7.8

>ATG1_KLULA (Q6CSX2) Serine/threonine-protein kinase ATG1 (EC 2.7.11.1)|
           (Autophagy-related protein 1)
          Length = 831

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
 Frame = +3

Query: 84  SVLLFVYSQHNTNAIAS------VSPQLLRELSRPCVLRGDRPHTPW 206
           SV LF Y QHNT A +S      ++PQ+ +EL+   VLR D    P+
Sbjct: 511 SVRLFGY-QHNTKATSSPPQQTLLNPQIFQELTENAVLRADHKLNPF 556



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>ARGJ_PSYAR (Q4FSF9) Arginine biosynthesis bifunctional protein argJ [Includes:|
           Glutamate N-acetyltransferase (EC 2.3.1.35) (Ornithine
           acetyltransferase) (Ornithine transacetylase) (OATase);
           Amino-acid acetyltransferase (EC 2.3.1.1)
           (N-acetylglutamate syn
          Length = 407

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = -1

Query: 558 HLTSGLPRMISLNNVSAKLRVSADSKEGSRDFCGGPASIAPLRNSTFL 415
           H     PR +  N  +A     AD K  + D C   A+ A + N+T L
Sbjct: 66  HFAKASPRYLVTNTGNANAGTGADGKRRAIDICAALAAKAGVNNNTVL 113


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,990,798
Number of Sequences: 219361
Number of extensions: 904554
Number of successful extensions: 2535
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2535
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4528412720
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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