ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bart54a12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_184245.2| Oryza sativa (japonica cultivar-group), mRNA Length = 955 Score = 79.8 bits (40), Expect = 9e-12 Identities = 93/110 (84%), Gaps = 3/110 (2%) Strand = Plus / Plus Query: 270 gccaagaggatgcggcccgaggacctgctcgacctgctggacgacgacaccgacgccgcg 329 ||||||||| ||||| | ||||||||||||||| |||| ||||| || |||||||||| | Sbjct: 166 gccaagaggctgcgggcggaggacctgctcgacatgctcgacgatgataccgacgccggg 225 Query: 330 ---gcggcaggcgacctggcctccgtcatgcggagcctggagaaggagat 376 || || ||||||||||| ||||||||||||||| | ||| ||||||| Sbjct: 226 ggcgccgccggcgacctggcgtccgtcatgcggagcttcgaggaggagat 275 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 400 cgcagccggagctggggttcctgctcgaggcctcggacgacgagctcggcctcccgcc 457 ||||||| ||||| |||||||| ||||||||||| ||||||||||||||||| ||||| Sbjct: 314 cgcagcccgagctcgggttccttctcgaggcctccgacgacgagctcggcctgccgcc 371
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 79.8 bits (40), Expect = 9e-12 Identities = 93/110 (84%), Gaps = 3/110 (2%) Strand = Plus / Plus Query: 270 gccaagaggatgcggcccgaggacctgctcgacctgctggacgacgacaccgacgccgcg 329 ||||||||| ||||| | ||||||||||||||| |||| ||||| || |||||||||| | Sbjct: 1738031 gccaagaggctgcgggcggaggacctgctcgacatgctcgacgatgataccgacgccggg 1738090 Query: 330 ---gcggcaggcgacctggcctccgtcatgcggagcctggagaaggagat 376 || || ||||||||||| ||||||||||||||| | ||| ||||||| Sbjct: 1738091 ggcgccgccggcgacctggcgtccgtcatgcggagcttcgaggaggagat 1738140 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 400 cgcagccggagctggggttcctgctcgaggcctcggacgacgagctcggcctcccgcc 457 ||||||| ||||| |||||||| ||||||||||| ||||||||||||||||| ||||| Sbjct: 1738179 cgcagcccgagctcgggttccttctcgaggcctccgacgacgagctcggcctgccgcc 1738236 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 296 gctcgacctgctggacgacgacacc 320 ||||||||||| ||||||||||||| Sbjct: 30615472 gctcgacctgcaggacgacgacacc 30615496 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 35116196 ctcctcctcctcctcatctc 35116177
>dbj|AP002526.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504H10 Length = 143515 Score = 79.8 bits (40), Expect = 9e-12 Identities = 93/110 (84%), Gaps = 3/110 (2%) Strand = Plus / Plus Query: 270 gccaagaggatgcggcccgaggacctgctcgacctgctggacgacgacaccgacgccgcg 329 ||||||||| ||||| | ||||||||||||||| |||| ||||| || |||||||||| | Sbjct: 80374 gccaagaggctgcgggcggaggacctgctcgacatgctcgacgatgataccgacgccggg 80433 Query: 330 ---gcggcaggcgacctggcctccgtcatgcggagcctggagaaggagat 376 || || ||||||||||| ||||||||||||||| | ||| ||||||| Sbjct: 80434 ggcgccgccggcgacctggcgtccgtcatgcggagcttcgaggaggagat 80483 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 400 cgcagccggagctggggttcctgctcgaggcctcggacgacgagctcggcctcccgcc 457 ||||||| ||||| |||||||| ||||||||||| ||||||||||||||||| ||||| Sbjct: 80522 cgcagcccgagctcgggttccttctcgaggcctccgacgacgagctcggcctgccgcc 80579
>dbj|AK101998.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033079K23, full insert sequence Length = 954 Score = 79.8 bits (40), Expect = 9e-12 Identities = 93/110 (84%), Gaps = 3/110 (2%) Strand = Plus / Plus Query: 270 gccaagaggatgcggcccgaggacctgctcgacctgctggacgacgacaccgacgccgcg 329 ||||||||| ||||| | ||||||||||||||| |||| ||||| || |||||||||| | Sbjct: 165 gccaagaggctgcgggcggaggacctgctcgacatgctcgacgatgataccgacgccggg 224 Query: 330 ---gcggcaggcgacctggcctccgtcatgcggagcctggagaaggagat 376 || || ||||||||||| ||||||||||||||| | ||| ||||||| Sbjct: 225 ggcgccgccggcgacctggcgtccgtcatgcggagcttcgaggaggagat 274 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 400 cgcagccggagctggggttcctgctcgaggcctcggacgacgagctcggcctcccgcc 457 ||||||| ||||| |||||||| ||||||||||| ||||||||||||||||| ||||| Sbjct: 313 cgcagcccgagctcgggttccttctcgaggcctccgacgacgagctcggcctgccgcc 370
>ref|XM_704508.1| PREDICTED: Danio rerio similar to bromo domain-containing protein disrupted in leukemia, transcript variant 3 (LOC567082), mRNA Length = 6759 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctctgctgctc 200 ||||||||||||||| |||||||||||| Sbjct: 5041 ctcctcctcctcctcctctctgctgctc 5014
>ref|XM_686352.1| PREDICTED: Danio rerio similar to bromo domain-containing protein disrupted in leukemia, transcript variant 1 (LOC567082), mRNA Length = 6738 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctctgctgctc 200 ||||||||||||||| |||||||||||| Sbjct: 5020 ctcctcctcctcctcctctctgctgctc 4993
>ref|XM_704507.1| PREDICTED: Danio rerio similar to bromo domain-containing protein disrupted in leukemia, transcript variant 2 (LOC567082), mRNA Length = 6690 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctctgctgctc 200 ||||||||||||||| |||||||||||| Sbjct: 4972 ctcctcctcctcctcctctctgctgctc 4945
>gb|BC070018.1| Danio rerio hypothetical protein LOC553209, mRNA (cDNA clone IMAGE:6964800), partial cds Length = 4727 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctctgctgctc 200 ||||||||||||||| |||||||||||| Sbjct: 2892 ctcctcctcctcctcctctctgctgctc 2865
>emb|AL935333.9| Zebrafish DNA sequence from clone CH211-198I18 in linkage group 5, complete sequence Length = 199019 Score = 48.1 bits (24), Expect = 0.030 Identities = 27/28 (96%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctctgctgctc 200 ||||||||||||||| |||||||||||| Sbjct: 154531 ctcctcctcctcctcctctctgctgctc 154504
>gb|AC108499.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1187_E11, complete sequence Length = 133352 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 309 gacgacgacaccgacgccgcggcggc 334 |||||||||||||| ||||||||||| Sbjct: 17833 gacgacgacaccgaggccgcggcggc 17858
>gb|AC109596.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1593_C11, complete sequence Length = 112065 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 309 gacgacgacaccgacgccgcggcggc 334 |||||||||||||| ||||||||||| Sbjct: 96143 gacgacgacaccgaggccgcggcggc 96168
>ref|XM_812168.1| Trypanosoma cruzi strain CL Brener nucleosome assembly protein (Tc00.1047053507031.29) partial mRNA Length = 1089 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 170 gagctcctcctcctcctcatct 191 |||||||||||||||||||||| Sbjct: 1008 gagctcctcctcctcctcatct 987
>emb|AL928657.21| Zebrafish DNA sequence from clone CH211-194I10 in linkage group 3, complete sequence Length = 187734 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 173 ctcctcctcctcctcatctctg 194 |||||||||||||||||||||| Sbjct: 10506 ctcctcctcctcctcatctctg 10527
>ref|XM_682859.1| PREDICTED: Danio rerio similar to CG31151-PB, isoform B (LOC559514), mRNA Length = 10641 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctctg 194 |||||||||||||||||||||| Sbjct: 5704 ctcctcctcctcctcatctctg 5683 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctctg 194 |||||||||||||||||||||| Sbjct: 2374 ctcctcctcctcctcatctctg 2353
>gb|AC151305.2| Xenopus tropicalis clone CH216-36A20, complete sequence Length = 72789 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 176 ctcctcctcctcatctctgctg 197 |||||||||||||||||||||| Sbjct: 68616 ctcctcctcctcatctctgctg 68595
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Plus Query: 309 gacgacgacaccgacgccgcggcggc 334 |||||||||||||| ||||||||||| Sbjct: 25993072 gacgacgacaccgaggccgcggcggc 25993097 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 ggagagctcctcctcctcctc 187 ||||||||||||||||||||| Sbjct: 21570415 ggagagctcctcctcctcctc 21570395 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 38361 ctcctcctcctcctcatctc 38380
>gb|AY754480.1| Drosophila pseudoobscura Bir-containing ubiquitin-conjugating enzyme (Bruce) gene, exons 19 through 23 and partial cds Length = 1025 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 tggagagctcctcctcctcctc 187 |||||||||||||||||||||| Sbjct: 514 tggagagctcctcctcctcctc 493
>gb|AE005073.1| Halobacterium sp. NRC-1 section 104 of 170 of the complete genome Length = 12021 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Minus Query: 454 cgccggccgcgggggcgtcgtcctcg 479 |||| ||||||||||||||||||||| Sbjct: 7009 cgcccgccgcgggggcgtcgtcctcg 6984
>emb|AL135838.6|CNS01DVI Human chromosome 14 DNA sequence BAC R-362L22 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 187710 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Minus Query: 175 cctcctcctcctcatctctgctgctc 200 ||||||||||||| |||||||||||| Sbjct: 26829 cctcctcctcctcctctctgctgctc 26804
>dbj|AP006124.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT15N01, TM0209, complete sequence Length = 104684 Score = 44.1 bits (22), Expect = 0.47 Identities = 25/26 (96%) Strand = Plus / Minus Query: 171 agctcctcctcctcctcatctctgct 196 |||||||||||||||||||| ||||| Sbjct: 49464 agctcctcctcctcctcatcgctgct 49439
>gb|M90412.1|STMHRDC Streptomyces aureofaciens principal sigma- like factor (hrdC) gene, complete cds Length = 1965 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 461 cgcgggggcgtcgtcctcgtcg 482 |||||||||||||||||||||| Sbjct: 782 cgcgggggcgtcgtcctcgtcg 761
>gb|AC109195.27| Mus musculus chromosome 15, clone RP24-212B11, complete sequence Length = 168270 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctct 193 ||||||||||||||||||||| Sbjct: 70526 ctcctcctcctcctcatctct 70506
>ref|XM_464289.1| Oryza sativa (japonica cultivar-group), mRNA Length = 546 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 305 gctggacgacgacaccgacgccgcg 329 ||||||||||||| ||||||||||| Sbjct: 396 gctggacgacgactccgacgccgcg 420
>ref|NM_191558.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2832 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 296 gctcgacctgctggacgacgacacc 320 ||||||||||| ||||||||||||| Sbjct: 138 gctcgacctgcaggacgacgacacc 162
>gb|AC137611.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0020H14, complete sequence Length = 185623 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 167 ggagagctcctcctcctcctc 187 ||||||||||||||||||||| Sbjct: 124271 ggagagctcctcctcctcctc 124251
>ref|XM_417977.1| PREDICTED: Gallus gallus similar to polymeric immunoglobulin receptor precursor (LOC419848), mRNA Length = 3413 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 184 cctcatctctgctgctcagct 204 ||||||||||||||||||||| Sbjct: 2068 cctcatctctgctgctcagct 2048
>ref|XM_882147.1| PREDICTED: Bos taurus similar to suppressor of Ty 6 homolog, transcript variant 8 (LOC538671), mRNA Length = 5878 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctct 193 ||||||||||||||||||||| Sbjct: 230 ctcctcctcctcctcatctct 210
>gb|AF303371.1| Gallus gallus polymeric immunoglobulin receptor precursor (PIGR) mRNA, complete cds Length = 2380 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 184 cctcatctctgctgctcagct 204 ||||||||||||||||||||| Sbjct: 997 cctcatctctgctgctcagct 977
>gb|AY233381.1| Gallus gallus polymeric immunoglobulin receptor (PIGR) gene, complete cds Length = 5341 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 184 cctcatctctgctgctcagct 204 ||||||||||||||||||||| Sbjct: 1907 cctcatctctgctgctcagct 1887
>gb|AC124764.3| Mus musculus BAC clone RP23-166K1 from chromosome 18, complete sequence Length = 209579 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctct 193 ||||||||||||||||||||| Sbjct: 68640 ctcctcctcctcctcatctct 68620
>gb|AC144732.3| Mus musculus BAC clone RP24-244I18 from chromosome 15, complete sequence Length = 151944 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctct 193 ||||||||||||||||||||| Sbjct: 37107 ctcctcctcctcctcatctct 37087
>ref|XM_812633.1| Trypanosoma cruzi strain CL Brener molybdenum cofactor biosynthesis protein (Tc00.1047053511211.40) partial mRNA Length = 2337 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 170 gagctcctcctcctcctcatc 190 ||||||||||||||||||||| Sbjct: 2067 gagctcctcctcctcctcatc 2047
>gb|AC124713.5| Mus musculus BAC clone RP24-116N2 from chromosome 8, complete sequence Length = 184855 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctct 193 ||||||||||||||||||||| Sbjct: 76465 ctcctcctcctcctcatctct 76445
>gb|AC004414.1| Homo sapiens PAC clone RP4-724E13 from 7, complete sequence Length = 115045 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 173 ctcctcctcctcctcatctctgctg 197 ||||||||||||||||||| ||||| Sbjct: 3249 ctcctcctcctcctcatctttgctg 3273
>emb|AL441989.13| Human DNA sequence from clone RP11-360A18 on chromosome 9 Contains a novel gene, complete sequence Length = 105068 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 tttttgcaccactcttttccc 36 ||||||||||||||||||||| Sbjct: 82861 tttttgcaccactcttttccc 82881
>gb|BT010035.1| Drosophila melanogaster LD47819 full insert cDNA Length = 6628 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 agctcctcctcctcctcatct 191 ||||||||||||||||||||| Sbjct: 5019 agctcctcctcctcctcatct 4999
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 tgctcgacctgctggacgacg 315 ||||||||||||||||||||| Sbjct: 97002 tgctcgacctgctggacgacg 97022 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 291 gacctgctcgacctgctgga 310 |||||||||||||||||||| Sbjct: 449448 gacctgctcgacctgctgga 449467
>emb|X72787.1|SGNUSG S.griseus nusG, rplKAJL gene cluster Length = 7235 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 460 ccgcgggggcgtcgtcctcgtcgga 484 |||||| |||||||||||||||||| Sbjct: 1597 ccgcggcggcgtcgtcctcgtcgga 1573
>gb|AC164311.4| Mus musculus BAC clone RP23-144H18 from chromosome 8, complete sequence Length = 190693 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctct 193 ||||||||||||||||||||| Sbjct: 166998 ctcctcctcctcctcatctct 166978
>emb|BX537282.9| Zebrafish DNA sequence from clone DKEY-90A24 in linkage group 5, complete sequence Length = 124378 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctctgctg 197 ||||||||||||||| ||||||||| Sbjct: 35097 ctcctcctcctcctcctctctgctg 35073
>ref|NM_167685.1| Drosophila melanogaster CG12701-RB, transcript variant B (CG12701), mRNA Length = 6597 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 agctcctcctcctcctcatct 191 ||||||||||||||||||||| Sbjct: 5006 agctcctcctcctcctcatct 4986
>ref|NM_134512.4| Drosophila melanogaster CG12701-RA, transcript variant A (CG12701), mRNA Length = 6610 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 171 agctcctcctcctcctcatct 191 ||||||||||||||||||||| Sbjct: 5019 agctcctcctcctcctcatct 4999
>gb|AC010671.8|AC010671 Drosophila melanogaster, chromosome X, region 18E-18F, BAC clone BACR33M08, complete sequence Length = 180263 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatct 191 ||||||||||||||||||||| Sbjct: 174581 agctcctcctcctcctcatct 174601
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 305 gctggacgacgacaccgacgccgcg 329 ||||||||||||| ||||||||||| Sbjct: 3853424 gctggacgacgactccgacgccgcg 3853400 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tcctcctcctcctcatctct 193 |||||||||||||||||||| Sbjct: 21574353 tcctcctcctcctcatctct 21574334 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 gggccggaggcggaggctgc 271 |||||||||||||||||||| Sbjct: 15186736 gggccggaggcggaggctgc 15186755 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 743403 agctcctcctcctcctcatc 743422
>gb|AC012165.6|AC012165 Drosophila melanogaster, chromosome X, region 18F-18F, BAC clone BACR48P17, complete sequence Length = 176195 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatct 191 ||||||||||||||||||||| Sbjct: 57941 agctcctcctcctcctcatct 57961
>dbj|AP003309.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0036G09 Length = 124118 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 296 gctcgacctgctggacgacgacacc 320 ||||||||||| ||||||||||||| Sbjct: 98076 gctcgacctgcaggacgacgacacc 98100
>dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1060H01 Length = 157987 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 296 gctcgacctgctggacgacgacacc 320 ||||||||||| ||||||||||||| Sbjct: 57749 gctcgacctgcaggacgacgacacc 57773
>emb|BX247948.4| Zebrafish DNA sequence from clone DKEY-34E4 in linkage group 5, complete sequence Length = 131707 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 ctcctcctcctcctcatctct 193 ||||||||||||||||||||| Sbjct: 21578 ctcctcctcctcctcatctct 21598
>emb|BX248103.7| Zebrafish DNA sequence from clone CH211-226C13 in linkage group 5, complete sequence Length = 66173 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 ctcctcctcctcctcatctct 193 ||||||||||||||||||||| Sbjct: 3817 ctcctcctcctcctcatctct 3837
>dbj|AP004113.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1116_A06 Length = 176062 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 305 gctggacgacgacaccgacgccgcg 329 ||||||||||||| ||||||||||| Sbjct: 109756 gctggacgacgactccgacgccgcg 109732
>dbj|AP004836.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030G02 Length = 187265 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 305 gctggacgacgacaccgacgccgcg 329 ||||||||||||| ||||||||||| Sbjct: 51895 gctggacgacgactccgacgccgcg 51871
>gb|AE005093.1| Halobacterium sp. NRC-1 section 124 of 170 of the complete genome Length = 12425 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 448 gcctcccgccggccgcggggg 468 ||||||||||||||||||||| Sbjct: 5460 gcctcccgccggccgcggggg 5480
>dbj|AK106590.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-111-G04, full insert sequence Length = 1953 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 ggagagctcctcctcctcctc 187 ||||||||||||||||||||| Sbjct: 65 ggagagctcctcctcctcctc 85
>gb|AC154300.2| Mus musculus BAC clone RP23-390F4 from 12, complete sequence Length = 187014 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 32 ttcccctccctcccgtctgca 52 ||||||||||||||||||||| Sbjct: 105230 ttcccctccctcccgtctgca 105250
>gb|AE003513.3| Drosophila melanogaster chromosome X, section 65 of 74 of the complete sequence Length = 207432 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatct 191 ||||||||||||||||||||| Sbjct: 78080 agctcctcctcctcctcatct 78100
>gb|AY879283.1| Gallus gallus polymeric immunoglobulin receptor precursor (PIGR) mRNA, complete cds Length = 2586 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 184 cctcatctctgctgctcagct 204 ||||||||||||||||||||| Sbjct: 1239 cctcatctctgctgctcagct 1219
>gb|BC109441.1| Danio rerio zgc:123293, mRNA (cDNA clone MGC:123293 IMAGE:7902204), complete cds Length = 1940 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 302 cctgctggacgacgacaccga 322 ||||||||||||||||||||| Sbjct: 245 cctgctggacgacgacaccga 265
>gb|AC109616.9| Mus musculus chromosome 19, clone RP23-449C1, complete sequence Length = 167801 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctct 193 ||||||||||||||||||||| Sbjct: 14324 ctcctcctcctcctcatctct 14304
>emb|AL929590.15| Zebrafish DNA sequence from clone DKEY-46K8 in linkage group 5, complete sequence Length = 163866 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctct 193 ||||||||||||||||||||| Sbjct: 62409 ctcctcctcctcctcatctct 62389
>ref|NM_001037698.1| Danio rerio zgc:123293 (zgc:123293), mRNA Length = 1940 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 302 cctgctggacgacgacaccga 322 ||||||||||||||||||||| Sbjct: 245 cctgctggacgacgacaccga 265
>gb|AC167979.3| Mus musculus BAC clone CH36-45M24 from chromosome 12, complete sequence Length = 173138 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 ctcctcctcctcctcatctct 193 ||||||||||||||||||||| Sbjct: 58475 ctcctcctcctcctcatctct 58495
>emb|AL929131.5| Zebrafish DNA sequence from clone CH211-286O17, complete sequence Length = 152081 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 cacccacccaccgctccaagg 114 ||||||||||||||||||||| Sbjct: 9423 cacccacccaccgctccaagg 9443
>gb|AC161877.5| Mus musculus BAC clone RP23-350G11 from chromosome 14, complete sequence Length = 227413 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 174 tcctcctcctcctcatctctg 194 ||||||||||||||||||||| Sbjct: 62408 tcctcctcctcctcatctctg 62428
>gb|AC102553.8| Mus musculus chromosome 19, clone RP23-159D6, complete sequence Length = 181534 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 ctcctcctcctcctcatctct 193 ||||||||||||||||||||| Sbjct: 56271 ctcctcctcctcctcatctct 56291
>gb|M90411.1|STMHRDB Streptomyces aureofaciens principal sigma- like factor (hrdB) gene, complete cds Length = 2332 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 462 gcgggggcgtcgtcctcgtcg 482 ||||||||||||||||||||| Sbjct: 983 gcgggggcgtcgtcctcgtcg 963
>dbj|D17464.1|STMSEC S.griseus genes for SecE and NusG, complete cds Length = 1975 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 460 ccgcgggggcgtcgtcctcgtcgga 484 |||||| |||||||||||||||||| Sbjct: 1150 ccgcggcggcgtcgtcctcgtcgga 1126
>gb|AC110244.10| Mus musculus chromosome 5, clone RP23-247E10, complete sequence Length = 214638 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 23680 ctcctcctcctcctcatctc 23661 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 23644 ctcctcctcctcctcatctc 23625
>gb|AY333426.1| Acipenser gueldenstaedtii LH beta subunit (GTHII) mRNA, complete cds Length = 599 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 ctcctcctcctcctcatctctgct 196 ||||||||||||||| |||||||| Sbjct: 88 ctcctcctcctcctcttctctgct 111
>gb|AC138604.5| Mus musculus BAC clone RP24-236J11 from chromosome 15, complete sequence Length = 196777 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 gctcctcctcctcctcatct 191 |||||||||||||||||||| Sbjct: 31045 gctcctcctcctcctcatct 31064
>gb|AC164157.3| Mus musculus BAC clone RP24-297C1 from chromosome 6, complete sequence Length = 176868 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 ggaggcggaggctgccaaga 276 |||||||||||||||||||| Sbjct: 111014 ggaggcggaggctgccaaga 111033
>ref|XM_465439.1| Oryza sativa (japonica cultivar-group), mRNA Length = 657 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 gggccggaggcggaggctgc 271 |||||||||||||||||||| Sbjct: 447 gggccggaggcggaggctgc 466
>ref|NM_001005249.1| Canis familiaris T-box 2 (TBX2), mRNA Length = 2302 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 tgcggagcctggagaaggag 374 |||||||||||||||||||| Sbjct: 1301 tgcggagcctggagaaggag 1320
>gb|AC165317.8| Mus musculus chromosome 5, clone RP23-265O20, complete sequence Length = 190857 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 149990 ctcctcctcctcctcatctc 149971
>ref|XM_463854.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1754 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 41 agctcctcctcctcctcatc 60
>ref|NM_192380.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 843 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 agctcgtctgccggccggcc 164 |||||||||||||||||||| Sbjct: 73 agctcgtctgccggccggcc 54
>gb|BT016746.1| Zea mays clone Contig579 mRNA sequence Length = 1555 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 ggacgacgacaccgacgccg 327 |||||||||||||||||||| Sbjct: 310 ggacgacgacaccgacgccg 329
>gb|BT017323.1| Zea mays clone EL01N0319F08.c mRNA sequence Length = 626 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctctgct 196 |||||||||||||||| ||||||| Sbjct: 261 ctcctcctcctcctcacctctgct 238
>gb|AC161431.4| Mus musculus chromosome 7, clone RP24-306C18, complete sequence Length = 148949 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 112566 ctcctcctcctcctcatctc 112585
>gb|AF402791.1| Hemibagrus nemurus clone VJ2-09 microsatellite sequence Length = 297 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 agagctcctcctcctcctca 188 |||||||||||||||||||| Sbjct: 291 agagctcctcctcctcctca 272
>gb|AF354284.1| Hemibagrus nemurus clone vj2226 microsatellite sequence Length = 359 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 gagagctcctcctcctcctc 187 |||||||||||||||||||| Sbjct: 354 gagagctcctcctcctcctc 335
>gb|AC129306.5| Mus musculus BAC clone RP24-178A16 from chromosome 16, complete sequence Length = 167601 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 45338 agctcctcctcctcctcatc 45357
>gb|AC113060.11| Mus musculus chromosome 13, clone RP23-255E18, complete sequence Length = 192264 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 tggagagctcctcctcctcc 185 |||||||||||||||||||| Sbjct: 6611 tggagagctcctcctcctcc 6630
>gb|AC140216.3| Mus musculus BAC clone RP23-276B20 from chromosome 5, complete sequence Length = 194560 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 4618 ctcctcctcctcctcatctc 4637
>gb|BC058412.1| Mus musculus serine/threonine kinase 32B, mRNA (cDNA clone MGC:67312 IMAGE:5715729), complete cds Length = 3367 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 2680 ctcctcctcctcctcatctc 2699 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 2644 ctcctcctcctcctcatctc 2663
>gb|BC056396.1| Mus musculus serine/threonine kinase 32B, mRNA (cDNA clone MGC:65645 IMAGE:6841272), complete cds Length = 3449 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 2756 ctcctcctcctcctcatctc 2775 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 2720 ctcctcctcctcctcatctc 2739
>gb|BC052404.1| Mus musculus serine/threonine kinase 32B, mRNA (cDNA clone MGC:63434 IMAGE:5715729), complete cds Length = 3367 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 2680 ctcctcctcctcctcatctc 2699 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 2644 ctcctcctcctcctcatctc 2663
>gb|AY211613.1| Mus musculus repressor of estrogen receptor activity (Bcap37) mRNA, complete cds Length = 1297 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 ggaggcggaggctgccaaga 276 |||||||||||||||||||| Sbjct: 800 ggaggcggaggctgccaaga 819
>ref|NM_007531.1| Mus musculus prohibitin 2 (Phb2), mRNA Length = 1287 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 ggaggcggaggctgccaaga 276 |||||||||||||||||||| Sbjct: 794 ggaggcggaggctgccaaga 813
>gb|AC122204.3| Mus musculus BAC clone RP23-73N8 from chromosome 1, complete sequence Length = 197949 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 75270 ctcctcctcctcctcatctc 75251
>gb|AC135080.2| Mus musculus BAC clone RP24-369P14 from chromosome 1, complete sequence Length = 164994 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 110 caagggaaagaatacggagaagga 133 |||||||||||| ||||||||||| Sbjct: 159154 caagggaaagaacacggagaagga 159131
>ref|NM_022416.1| Mus musculus serine/threonine kinase 32B (Stk32b), mRNA Length = 3367 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 2680 ctcctcctcctcctcatctc 2699 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 2644 ctcctcctcctcctcatctc 2663
>gb|AC091458.5| Mus musculus chromosome 12, clone RP23-68M8, complete sequence Length = 289751 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 gctcctcctcctcctcatct 191 |||||||||||||||||||| Sbjct: 183589 gctcctcctcctcctcatct 183608
>gb|AC102388.7| Mus musculus chromosome 3, clone RP24-298F19, complete sequence Length = 166620 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ttaccttcacctgcacccac 100 |||||||||||||||||||| Sbjct: 13096 ttaccttcacctgcacccac 13115
>gb|AC142167.4| Mus musculus BAC clone RP24-117F4 from chromosome 3, complete sequence Length = 190937 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 gctcctcctcctcctcatct 191 |||||||||||||||||||| Sbjct: 168487 gctcctcctcctcctcatct 168468
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 tgctcgacctgctggacgac 314 |||||||||||||||||||| Sbjct: 3798199 tgctcgacctgctggacgac 3798180
>gb|AC164431.2| Mus musculus BAC clone RP23-430N15 from chromosome 17, complete sequence Length = 190724 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tcctcctcctcctcatctct 193 |||||||||||||||||||| Sbjct: 165331 tcctcctcctcctcatctct 165312
>gb|AY986897.1| Ipomoea trifida isolate GRIF6199-2 anthocyanin gene transcription factor (myb1) gene, partial cds Length = 398 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 165 agctcctcctcctcctcatc 184
>gb|AY986891.1| Ipomoea trifida isolate PI618966-2 anthocyanin gene transcription factor (myb1) gene, partial cds Length = 398 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 165 agctcctcctcctcctcatc 184
>gb|AY986890.1| Ipomoea trifida isolate PI618966-1 anthocyanin gene transcription factor (myb1) gene, partial cds Length = 398 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 165 agctcctcctcctcctcatc 184
>gb|AY986833.1| Ipomoea triloba anthocyanin transcription factor (myb1) gene, partial cds Length = 399 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 165 agctcctcctcctcctcatc 184
>gb|AC137871.18| Mus musculus chromosome 15, clone RP23-41B9, complete sequence Length = 223529 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 gctcctcctcctcctcatct 191 |||||||||||||||||||| Sbjct: 198239 gctcctcctcctcctcatct 198258
>gb|AC118704.17| Mus musculus chromosome 13, clone RP24-114K21, complete sequence Length = 197574 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 tggagagctcctcctcctcc 185 |||||||||||||||||||| Sbjct: 58374 tggagagctcctcctcctcc 58355
>ref|XM_844910.1| PREDICTED: Canis familiaris similar to shroom (LOC478438), mRNA Length = 6878 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 381 gccggcgacctggccccgccgcag 404 ||||||| |||||||||||||||| Sbjct: 3701 gccggcggcctggccccgccgcag 3724
>gb|AC132310.3| Mus musculus BAC clone RP24-295G16 from chromosome 16, complete sequence Length = 136671 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 85891 agctcctcctcctcctcatc 85910
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 ggacctgctcgacctgctgg 309 |||||||||||||||||||| Sbjct: 1213320 ggacctgctcgacctgctgg 1213301 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 ctgctcgacctgctggacga 313 |||||||||||||||||||| Sbjct: 394702 ctgctcgacctgctggacga 394721
>ref|XM_849336.1| PREDICTED: Canis familiaris hypothetical protein LOC611643 (LOC611643), mRNA Length = 2361 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 174 tcctcctcctcctcatctctgctg 197 ||||||||||||||||| |||||| Sbjct: 1133 tcctcctcctcctcatcgctgctg 1110
>ref|XM_742616.1| Aspergillus fumigatus Af293 hypothetical protein (Afu6g03680) partial mRNA Length = 1059 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 463 cgggggcgtcgtcctcgtcggacg 486 |||||||||||| ||||||||||| Sbjct: 892 cgggggcgtcgtgctcgtcggacg 869
>gb|AC112950.9| Mus musculus chromosome 1, clone RP23-288K15, complete sequence Length = 179084 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 123 acggagaaggaacaagggagaaag 146 ||||||||||||| |||||||||| Sbjct: 29741 acggagaaggaacgagggagaaag 29764
>ref|XM_845694.1| PREDICTED: Canis familiaris similar to Bromodomain-containing protein 2 (RING3 protein) (O27.1.1), transcript variant 3 (LOC474868), mRNA Length = 4472 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 3793 agctcctcctcctcctcatc 3812
>ref|XM_857179.1| PREDICTED: Canis familiaris similar to Bromodomain-containing protein 2 (RING3 protein) (O27.1.1), transcript variant 27 (LOC474868), mRNA Length = 4418 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 3739 agctcctcctcctcctcatc 3758
>ref|XM_857148.1| PREDICTED: Canis familiaris similar to Bromodomain-containing protein 2 (RING3 protein) (O27.1.1), transcript variant 26 (LOC474868), mRNA Length = 4445 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 3766 agctcctcctcctcctcatc 3785
>ref|XM_857124.1| PREDICTED: Canis familiaris similar to Bromodomain-containing protein 2 (RING3 protein) (O27.1.1), transcript variant 25 (LOC474868), mRNA Length = 4430 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 3751 agctcctcctcctcctcatc 3770
>ref|XM_857101.1| PREDICTED: Canis familiaris similar to Bromodomain-containing protein 2 (RING3 protein) (O27.1.1), transcript variant 24 (LOC474868), mRNA Length = 4379 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 3700 agctcctcctcctcctcatc 3719
>ref|XM_857073.1| PREDICTED: Canis familiaris similar to Bromodomain-containing protein 2 (RING3 protein) (O27.1.1), transcript variant 23 (LOC474868), mRNA Length = 4439 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 3760 agctcctcctcctcctcatc 3779
>ref|XM_857050.1| PREDICTED: Canis familiaris similar to Bromodomain-containing protein 2 (RING3 protein) (O27.1.1), transcript variant 22 (LOC474868), mRNA Length = 4436 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 3757 agctcctcctcctcctcatc 3776
>ref|XM_857024.1| PREDICTED: Canis familiaris similar to Bromodomain-containing protein 2 (RING3 protein) (O27.1.1), transcript variant 21 (LOC474868), mRNA Length = 4558 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 3879 agctcctcctcctcctcatc 3898
>ref|XM_856996.1| PREDICTED: Canis familiaris similar to Bromodomain-containing protein 2 (RING3 protein) (O27.1.1), transcript variant 20 (LOC474868), mRNA Length = 4379 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 3700 agctcctcctcctcctcatc 3719
>ref|XM_856964.1| PREDICTED: Canis familiaris similar to Bromodomain-containing protein 2 (RING3 protein) (O27.1.1), transcript variant 19 (LOC474868), mRNA Length = 2746 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 2067 agctcctcctcctcctcatc 2086
>ref|XM_856938.1| PREDICTED: Canis familiaris similar to Bromodomain-containing protein 2 (RING3 protein) (O27.1.1), transcript variant 18 (LOC474868), mRNA Length = 4178 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 3499 agctcctcctcctcctcatc 3518
>ref|XM_856904.1| PREDICTED: Canis familiaris similar to Bromodomain-containing protein 2 (RING3 protein) (O27.1.1), transcript variant 17 (LOC474868), mRNA Length = 4430 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 3751 agctcctcctcctcctcatc 3770
>ref|XM_856875.1| PREDICTED: Canis familiaris similar to Bromodomain-containing protein 2 (RING3 protein) (O27.1.1), transcript variant 16 (LOC474868), mRNA Length = 4418 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 3739 agctcctcctcctcctcatc 3758
>ref|XM_856850.1| PREDICTED: Canis familiaris similar to Bromodomain-containing protein 2 (RING3 protein) (O27.1.1), transcript variant 15 (LOC474868), mRNA Length = 4424 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 3745 agctcctcctcctcctcatc 3764
>ref|XM_856827.1| PREDICTED: Canis familiaris similar to Bromodomain-containing protein 2 (RING3 protein) (O27.1.1), transcript variant 14 (LOC474868), mRNA Length = 2577 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 1898 agctcctcctcctcctcatc 1917
>ref|XM_856799.1| PREDICTED: Canis familiaris similar to Bromodomain-containing protein 2 (RING3 protein) (O27.1.1), transcript variant 13 (LOC474868), mRNA Length = 4337 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 3658 agctcctcctcctcctcatc 3677
>ref|XM_856773.1| PREDICTED: Canis familiaris similar to Bromodomain-containing protein 2 (RING3 protein) (O27.1.1), transcript variant 12 (LOC474868), mRNA Length = 4268 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 3589 agctcctcctcctcctcatc 3608
>ref|XM_856743.1| PREDICTED: Canis familiaris similar to Bromodomain-containing protein 2 (RING3 protein) (O27.1.1), transcript variant 11 (LOC474868), mRNA Length = 4343 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 3664 agctcctcctcctcctcatc 3683
>ref|XM_856717.1| PREDICTED: Canis familiaris similar to Bromodomain-containing protein 2 (RING3 protein) (O27.1.1), transcript variant 10 (LOC474868), mRNA Length = 4343 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 3664 agctcctcctcctcctcatc 3683
>ref|XM_856686.1| PREDICTED: Canis familiaris similar to Bromodomain-containing protein 2 (RING3 protein) (O27.1.1), transcript variant 9 (LOC474868), mRNA Length = 4346 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 3667 agctcctcctcctcctcatc 3686
>ref|XM_856631.1| PREDICTED: Canis familiaris similar to Bromodomain-containing protein 2 (RING3 protein) (O27.1.1), transcript variant 7 (LOC474868), mRNA Length = 2734 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 2055 agctcctcctcctcctcatc 2074
>ref|XM_532103.2| PREDICTED: Canis familiaris similar to Bromodomain-containing protein 2 (RING3 protein) (O27.1.1), transcript variant 1 (LOC474868), mRNA Length = 4466 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 3787 agctcctcctcctcctcatc 3806
>gb|AC140375.2| Mus musculus BAC clone RP23-183J2 from chromosome 19, complete sequence Length = 198254 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 gaaagaatacggagaaggaa 134 |||||||||||||||||||| Sbjct: 109240 gaaagaatacggagaaggaa 109259
>gb|AC122255.2| Mus musculus BAC clone RP23-178F22 from chromosome 3, complete sequence Length = 185132 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 104300 ctcctcctcctcctcatctc 104319
>gb|AC138717.2| Mus musculus BAC clone RP23-268G21 from chromosome 7, complete sequence Length = 141977 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 19595 ctcctcctcctcctcatctc 19576
>gb|AC113307.12| Mus musculus chromosome 3, clone RP23-437A2, complete sequence Length = 202835 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 7609 ctcctcctcctcctcatctc 7628
>gb|AC125176.4| Mus musculus BAC clone RP24-574O24 from chromosome 3, complete sequence Length = 162693 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 gctcctcctcctcctcatct 191 |||||||||||||||||||| Sbjct: 146140 gctcctcctcctcctcatct 146121
>gb|AC010799.15| Homo sapiens chromosome 15, clone RP11-40J8, complete sequence Length = 179508 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 cagggaggtcgaccttgagg 252 |||||||||||||||||||| Sbjct: 160132 cagggaggtcgaccttgagg 160151
>gb|BC043978.1| Xenopus laevis hypothetical protein MGC53395, mRNA (cDNA clone MGC:53395 IMAGE:5571543), complete cds Length = 2891 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 1657 ctcctcctcctcctcatctc 1638
>emb|CR715431.2|CNS0GEZ7 Tetraodon nigroviridis full-length cDNA Length = 899 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctctgct 196 |||||||||||||||||| ||||| Sbjct: 74 ctcctcctcctcctcatcactgct 51
>gb|AC019043.8| Homo sapiens BAC clone RP11-11B21 from 7, complete sequence Length = 211680 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 gcagccggagctggggttcc 420 |||||||||||||||||||| Sbjct: 176759 gcagccggagctggggttcc 176778
>gb|AY319418.1| Mus musculus repressor of estrogen receptor activity (REA) mRNA, complete cds Length = 900 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 ggaggcggaggctgccaaga 276 |||||||||||||||||||| Sbjct: 690 ggaggcggaggctgccaaga 709
>gb|AC163496.4| Mus musculus chromosome 1, clone RP24-325M15, complete sequence Length = 165387 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 110 caagggaaagaatacggagaagga 133 |||||||||||| ||||||||||| Sbjct: 110986 caagggaaagaacacggagaagga 111009
>gb|BC094956.1| Rattus norvegicus cDNA clone IMAGE:7368168, **** WARNING: chimeric clone **** Length = 3392 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 2468 agctcctcctcctcctcatc 2487
>emb|CR450692.5| Zebrafish DNA sequence from clone CH211-198J13 in linkage group 2, complete sequence Length = 180976 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 174 tcctcctcctcctcatctctgctgctca 201 |||||||||||||| ||| ||||||||| Sbjct: 149867 tcctcctcctcctcctctttgctgctca 149840
>emb|AL713851.8| Human DNA sequence from clone RP11-526P5 on chromosome 10 Contains two novel genes and three CpG islands, complete sequence Length = 158779 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tcctcctcctcctcatctct 193 |||||||||||||||||||| Sbjct: 54607 tcctcctcctcctcatctct 54626
>emb|AL590703.15| Human DNA sequence from clone RP11-120J8 on chromosome 6 Contains the 5' end of the gene for hypothetical protein FLJ14917, a novel gene (FLJ30544) and a CpG island, complete sequence Length = 54492 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tcctcctcctcctcatctct 193 |||||||||||||||||||| Sbjct: 24551 tcctcctcctcctcatctct 24570
>emb|AL445209.4| Human DNA sequence from clone RP11-52L5 on chromosome 13 Contains a transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) (TCEB1) pseudogene, a novel gene, the POU4F1 gene for POU domain, class 4, transcription factor 1 (BRN3A, RDC-1), the 3' end a novel gene (contains FLJ13449, possible ortholog of mouse 2810449K13Rik protein) and 3 CpG islands, complete sequence Length = 157302 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 124024 ctcctcctcctcctcatctc 124043
>ref|XM_504739.1| Yarrowia lipolytica CLIB122, YALI0E33627g predicted mRNA Length = 2175 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gagctcctcctcctcctcat 189 |||||||||||||||||||| Sbjct: 1874 gagctcctcctcctcctcat 1893
>gb|BT010031.1| Drosophila melanogaster RE01344 full insert cDNA Length = 4523 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctctgct 196 |||||||||||||||||| ||||| Sbjct: 2633 ctcctcctcctcctcatcgctgct 2610
>gb|AC079199.9| Homo sapiens chromosome 17, clone RP11-94L15, complete sequence Length = 161815 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 ccggaggcggaggctgccaa 274 |||||||||||||||||||| Sbjct: 45151 ccggaggcggaggctgccaa 45132
>gb|AC040933.12| Homo sapiens chromosome 17, clone CTD-2019C10, complete sequence Length = 168585 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 ccggaggcggaggctgccaa 274 |||||||||||||||||||| Sbjct: 82479 ccggaggcggaggctgccaa 82460
>gb|BC038213.1| Homo sapiens, clone IMAGE:5399737, mRNA Length = 850 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctctgctgctc 200 ||||||||||||||| || ||||||||| Sbjct: 118 ctcctcctcctcctcttccctgctgctc 91
>emb|AL024474.1|HS91J24 Human DNA sequence from clone RP1-91J24 on chromosome 6q24 Contains a pseudogene similar to single-stranded DNA-binding protein, the 5' end of the UTRN gene for utrophin (dystrophin-related protein) (DRP, DRP1, DMDL) and a putative novel gene. Contains a CpG island, complete sequence Length = 95267 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 ctcctcctcctcatctctgc 195 |||||||||||||||||||| Sbjct: 87595 ctcctcctcctcatctctgc 87576
>emb|AL009178.4|HS431P23 Human DNA sequence from clone RP3-431P23 on chromosome 6q27 Contains the 5' end of the MLLT4 gene for myeloid/lymphoid or mixed-lineage leukemia (trithorax (Drosophila) homolog) translocated gene protein 4 (AF-6, Afadin, ALL-1 fusion partner), genes HGC6.4 and HGC6.2, a serine palmitoyltransferase long chain base subunit 2 (SPTLC2) (LCB2) pseudogene and two CpG islands, complete sequence Length = 147971 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatctctg 194 ||||||||||||| |||||||||| Sbjct: 125706 agctcctcctcctgctcatctctg 125729
>emb|CR936325.2| Medicago truncatula chromosome 5 clone mth2-53m2, COMPLETE SEQUENCE Length = 139736 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 78895 ctcctcctcctcctcatctc 78914
>ref|XM_791403.1| PREDICTED: Strongylocentrotus purpuratus similar to CG7917-PA (LOC591856), partial mRNA Length = 1188 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 801 ctcctcctcctcctcatctc 782
>ref|XM_787755.1| PREDICTED: Strongylocentrotus purpuratus similar to F-box only protein, helicase, 18 isoform 1 (LOC588054), mRNA Length = 2367 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctctgct 196 ||||||||||||||| |||||||| Sbjct: 919 ctcctcctcctcctcttctctgct 896
>ref|XM_776499.1| PREDICTED: Strongylocentrotus purpuratus similar to vacuolar protein sorting 13C protein isoform 1A (LOC576161), mRNA Length = 8064 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 2676 ctcctcctcctcctcatctc 2657
>ref|XM_780162.1| PREDICTED: Strongylocentrotus purpuratus similar to membrane component chromosome 11 surface marker 1 isoform 1 (LOC580088), mRNA Length = 682 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 529 ctcctcctcctcctcatctc 510
>ref|XM_795063.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC582016 (LOC582016), mRNA Length = 528 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 426 ctcctcctcctcctcatctc 407
>gb|AC165086.4| Mus musculus BAC clone RP23-209B2 from chromosome 7, complete sequence Length = 195905 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 77928 ctcctcctcctcctcatctc 77947
>gb|AC163355.2| Mus musculus BAC clone RP23-11P15 from chromosome 16, complete sequence Length = 225547 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 34963 ctcctcctcctcctcatctc 34944
>emb|AJ630365.1| Canis familiaris MHC class II region on chromosome CFA12, partial sequence, BAC clone 181g17, containing DLA-DMB, DLA-DMA and BRD2 genes, GL004-like protein pseudogene, DLA-DOA gene, RPL26 and RPL11 pseudogenes, DLA-DPB1 pseudogenes, DLA-DPA1 pseudogene, UPF0224 family pseudogene and partial col11a2 gene Length = 155570 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 60286 agctcctcctcctcctcatc 60305
>emb|AJ511785.1|FRU511785 Takifugu rubripes partial junDLa gene for JunDLa Length = 3850 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 gccccgccgcagccggagct 412 |||||||||||||||||||| Sbjct: 2492 gccccgccgcagccggagct 2511
>emb|AJ251656.1|AST251656 Acipenser baerii mRNA for luteinizing hormone (LH gene) Length = 580 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 ctcctcctcctcctcatctctgct 196 ||||||||||||||| |||||||| Sbjct: 72 ctcctcctcctcctcttctctgct 95
>gb|AY108039.2| Zea mays PCO102751 mRNA sequence Length = 1150 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctctgct 196 |||||||||||||||| ||||||| Sbjct: 736 ctcctcctcctcctcacctctgct 713
>emb|CR735124.10| Zebrafish DNA sequence from clone CH211-186G12 in linkage group 21, complete sequence Length = 149968 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 98299 agctcctcctcctcctcatc 98280
>gb|AC025678.7| Homo sapiens chromosome 15, clone RP11-602M11, complete sequence Length = 189533 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 cagggaggtcgaccttgagg 252 |||||||||||||||||||| Sbjct: 120816 cagggaggtcgaccttgagg 120835
>emb|AL596324.7| Mouse DNA sequence from clone RP23-324M14 on chromosome 11, complete sequence Length = 204453 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 tgcggagcctggagaaggag 374 |||||||||||||||||||| Sbjct: 202046 tgcggagcctggagaaggag 202065
>gb|AC094105.3| Homo sapiens chromosome 5 clone RP11-468D11, complete sequence Length = 186314 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 35221 ctcctcctcctcctcatctc 35202
>emb|CR513786.5| Zebrafish DNA sequence from clone CH211-92F19 in linkage group 14, complete sequence Length = 97391 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 47541 ctcctcctcctcctcatctc 47522
>emb|CR626867.6| Human DNA sequence from clone XX-HCC1954_8J23, complete sequence Length = 89963 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 ccggaggcggaggctgccaa 274 |||||||||||||||||||| Sbjct: 43410 ccggaggcggaggctgccaa 43391
>gb|AC023747.4| Drosophila melanogaster X BAC RP98-38L1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167097 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctctgct 196 |||||||||||||||||| ||||| Sbjct: 125292 ctcctcctcctcctcatcgctgct 125269
>emb|CR626880.9| Human DNA sequence from clone XX-HCC1954_11K06, complete sequence Length = 151284 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 ccggaggcggaggctgccaa 274 |||||||||||||||||||| Sbjct: 71538 ccggaggcggaggctgccaa 71519
>gb|AC091565.10| Homo sapiens chromosome 15, clone RP11-228M15, complete sequence Length = 180741 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 cagggaggtcgaccttgagg 252 |||||||||||||||||||| Sbjct: 74835 cagggaggtcgaccttgagg 74816
>gb|AC087491.5| Homo sapiens chromosome 17, clone RP11-62N23, complete sequence Length = 157216 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 ccggaggcggaggctgccaa 274 |||||||||||||||||||| Sbjct: 131304 ccggaggcggaggctgccaa 131285
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 ggacctgctcgacctgctgg 309 |||||||||||||||||||| Sbjct: 1016350 ggacctgctcgacctgctgg 1016331
>emb|AJ566902.2|YLI566902 Yarrowia lipolytica RIM9 gene for Rim9 protein Length = 2651 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 gagctcctcctcctcctcat 189 |||||||||||||||||||| Sbjct: 1960 gagctcctcctcctcctcat 1979
>gb|AE011737.1| Xanthomonas axonopodis pv. citri str. 306, section 115 of 469 of the complete genome Length = 10029 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 ggacctgctcgacctgctgg 309 |||||||||||||||||||| Sbjct: 1397 ggacctgctcgacctgctgg 1378
>gb|AE011659.1| Xanthomonas axonopodis pv. citri str. 306, section 37 of 469 of the complete genome Length = 10772 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 ctgctcgacctgctggacga 313 |||||||||||||||||||| Sbjct: 3192 ctgctcgacctgctggacga 3211
>gb|AC012295.20| Mus musculus chromosome 11, clone RP23-48A17, complete sequence Length = 187364 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 tgcggagcctggagaaggag 374 |||||||||||||||||||| Sbjct: 21638 tgcggagcctggagaaggag 21657
>gb|AE012128.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 36 of 460 of the complete genome Length = 10504 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 ctgctcgacctgctggacga 313 |||||||||||||||||||| Sbjct: 950 ctgctcgacctgctggacga 969
>ref|NM_080332.2| Drosophila melanogaster ruby CG11427-RA (rb), mRNA Length = 4829 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctctgct 196 |||||||||||||||||| ||||| Sbjct: 2632 ctcctcctcctcctcatcgctgct 2609
>dbj|AK137225.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length enriched library, clone:9530053G22 product:T-box 2, full insert sequence Length = 1955 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 tgcggagcctggagaaggag 374 |||||||||||||||||||| Sbjct: 958 tgcggagcctggagaaggag 977
>gb|AC005414.2| Homo sapiens 12p13.3 PAC RPCI4-696F19 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 109370 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 tcatctctgctgctcagctc 205 |||||||||||||||||||| Sbjct: 2134 tcatctctgctgctcagctc 2115
>dbj|AK135729.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420407L22 product:B-cell receptor-associated protein 37, full insert sequence Length = 1268 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 ggaggcggaggctgccaaga 276 |||||||||||||||||||| Sbjct: 755 ggaggcggaggctgccaaga 774
>dbj|AK132058.1| Mus musculus 12 days embryo head cDNA, RIKEN full-length enriched library, clone:3010020C14 product:B-cell receptor-associated protein 37, full insert sequence Length = 1342 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 ggaggcggaggctgccaaga 276 |||||||||||||||||||| Sbjct: 827 ggaggcggaggctgccaaga 846
>dbj|AK132052.1| Mus musculus 12 days embryo head cDNA, RIKEN full-length enriched library, clone:3010004L20 product:B-cell receptor-associated protein 37, full insert sequence Length = 1322 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 ggaggcggaggctgccaaga 276 |||||||||||||||||||| Sbjct: 800 ggaggcggaggctgccaaga 819
>ref|NM_009324.1| Mus musculus T-box 2 (Tbx2), mRNA Length = 2280 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 tgcggagcctggagaaggag 374 |||||||||||||||||||| Sbjct: 1284 tgcggagcctggagaaggag 1303
>dbj|AK151952.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830043L14 product:B-cell receptor-associated protein 37, full insert sequence Length = 1354 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 ggaggcggaggctgccaaga 276 |||||||||||||||||||| Sbjct: 832 ggaggcggaggctgccaaga 851
>gb|AC024908.22| Homo sapiens 10 BAC RP11-446F3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 158349 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tcctcctcctcctcatctct 193 |||||||||||||||||||| Sbjct: 5659 tcctcctcctcctcatctct 5640
>dbj|AK149348.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930035G23 product:T-box 2, full insert sequence Length = 3056 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 tgcggagcctggagaaggag 374 |||||||||||||||||||| Sbjct: 1556 tgcggagcctggagaaggag 1575
>dbj|AK152375.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830067G04 product:B-cell receptor-associated protein 37, full insert sequence Length = 2403 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 ggaggcggaggctgccaaga 276 |||||||||||||||||||| Sbjct: 1487 ggaggcggaggctgccaaga 1506
>ref|XM_927422.1| PREDICTED: Homo sapiens similar to GM88 autoantigen isoform c (LOC440267), mRNA Length = 3338 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 cagggaggtcgaccttgagg 252 |||||||||||||||||||| Sbjct: 593 cagggaggtcgaccttgagg 574
>ref|XM_496062.2| PREDICTED: Homo sapiens similar to GM88 autoantigen isoform c (LOC440266), mRNA Length = 3056 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 cagggaggtcgaccttgagg 252 |||||||||||||||||||| Sbjct: 353 cagggaggtcgaccttgagg 334
>ref|XM_927044.1| PREDICTED: Homo sapiens similar to GM88 autoantigen isoform c (LOC342167), mRNA Length = 3098 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 cagggaggtcgaccttgagg 252 |||||||||||||||||||| Sbjct: 353 cagggaggtcgaccttgagg 334
>ref|XM_926998.1| PREDICTED: Homo sapiens similar to GM88 autoantigen isoform c (LOC643699), mRNA Length = 3053 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 cagggaggtcgaccttgagg 252 |||||||||||||||||||| Sbjct: 353 cagggaggtcgaccttgagg 334
>dbj|AK153368.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830149M24 product:B-cell receptor-associated protein 37, full insert sequence Length = 2403 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 ggaggcggaggctgccaaga 276 |||||||||||||||||||| Sbjct: 1487 ggaggcggaggctgccaaga 1506
>gb|AF334758.1|AF334758 Hordeum vulgare homeodomain protein JUBEL1 (JuBel1) gene, complete cds Length = 13757 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 172 gctcctcctcctcctcatct 191 |||||||||||||||||||| Sbjct: 2404 gctcctcctcctcctcatct 2423
>ref|XM_685596.1| PREDICTED: Danio rerio hypothetical protein LOC562197 (LOC562197), mRNA Length = 3109 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 2156 agctcctcctcctcctcatc 2137 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 2030 agctcctcctcctcctcatc 2011
>gb|AC019322.8| Homo sapiens chromosome 15, clone RP11-382B18, complete sequence Length = 175205 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 cagggaggtcgaccttgagg 252 |||||||||||||||||||| Sbjct: 111099 cagggaggtcgaccttgagg 111118
>gb|AY192801.1|AH012457S4 Canis familiaris T-box 2 transcription factor (Tbx2) gene, exons 4, 5, and 6 Length = 1993 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 tgcggagcctggagaaggag 374 |||||||||||||||||||| Sbjct: 1118 tgcggagcctggagaaggag 1137
>dbj|AK010941.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2510009F08 product:RIKEN cDNA 2510009F08 gene, full insert sequence Length = 1596 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 929 ctcctcctcctcctcatctc 948 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 893 ctcctcctcctcctcatctc 912
>gb|AC119881.10| Mus musculus chromosome 3, clone RP24-428N8, complete sequence Length = 167095 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 160915 ctcctcctcctcctcatctc 160934
>gb|AC161058.2| Mus musculus BAC clone RP23-205J6 from chromosome 5, complete sequence Length = 222180 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 87375 ctcctcctcctcctcatctc 87356
>emb|CR385183.1| Gallus gallus finished cDNA, clone ChEST541j20 Length = 1004 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctctgct 196 ||||||||||||||| |||||||| Sbjct: 599 ctcctcctcctcctcctctctgct 576
>dbj|AK081408.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130014L07 product:unclassifiable, full insert sequence Length = 2688 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 95 acccacccaccgctccaagggaaa 118 ||||||||||| |||||||||||| Sbjct: 859 acccacccacctctccaagggaaa 836
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 294 ctgctcgacctgctggacga 313 |||||||||||||||||||| Sbjct: 387848 ctgctcgacctgctggacga 387867
>dbj|AK031725.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length enriched library, clone:6030497H02 product:unclassifiable, full insert sequence Length = 1472 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 95 acccacccaccgctccaagggaaa 118 ||||||||||| |||||||||||| Sbjct: 897 acccacccacctctccaagggaaa 874
>gb|AC027139.5|AC027139 Homo sapiens, clone RP11-1H8, complete sequence Length = 151498 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 cagggaggtcgaccttgagg 252 |||||||||||||||||||| Sbjct: 96481 cagggaggtcgaccttgagg 96500
>dbj|AK090088.1| Mus musculus RCB-1283 B16 melanoma cDNA, RIKEN full-length enriched library, clone:G430096M21 product:B-cell receptor-associated protein 37, full insert sequence Length = 1317 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 ggaggcggaggctgccaaga 276 |||||||||||||||||||| Sbjct: 795 ggaggcggaggctgccaaga 814
>gb|AF283502.1| Cryphonectria parasitica Crypt1 transposon transposase gene, complete cds Length = 3563 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 tcctcctcatctctgctgct 199 |||||||||||||||||||| Sbjct: 3225 tcctcctcatctctgctgct 3206
>dbj|AK082468.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230053G02 product:serine threonine kinase 32, full insert sequence Length = 3439 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 2772 ctcctcctcctcctcatctc 2791 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 2736 ctcctcctcctcctcatctc 2755
>dbj|AK047638.1| Mus musculus adult male corpus striatum cDNA, RIKEN full-length enriched library, clone:C030004B18 product:unclassifiable, full insert sequence Length = 5050 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 95 acccacccaccgctccaagggaaa 118 ||||||||||| |||||||||||| Sbjct: 4068 acccacccacctctccaagggaaa 4045
>dbj|AK011107.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2510047C23 product:B-cell receptor-associated protein 37, full insert sequence Length = 1328 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 257 ggaggcggaggctgccaaga 276 |||||||||||||||||||| Sbjct: 805 ggaggcggaggctgccaaga 824
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 10231983 ctcctcctcctcctcatctc 10231964
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 462 gcgggggcgtcgtcctcgtc 481 |||||||||||||||||||| Sbjct: 20538249 gcgggggcgtcgtcctcgtc 20538230
>gb|AC007300.6|AC007300 Drosophila melanogaster, chromosome 2L, region 32A-, BAC clone BACR09I15, complete sequence Length = 169090 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 ggcaagaggggcagggaggt 241 |||||||||||||||||||| Sbjct: 98022 ggcaagaggggcagggaggt 98041
>gb|AC123768.8| Homo sapiens chromosome 15, clone RP11-1000B6, complete sequence Length = 186455 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 cagggaggtcgaccttgagg 252 |||||||||||||||||||| Sbjct: 82270 cagggaggtcgaccttgagg 82251
>gb|AY787762.1| Streptomyces filamentosus strain NRRL 11379 daptomycin biosynthetic gene cluster, partial sequence Length = 127559 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 cgaggacctgctcgacctgc 306 |||||||||||||||||||| Sbjct: 7767 cgaggacctgctcgacctgc 7786
>gb|AC026150.7| Homo sapiens chromosome 15, clone RP11-605N15, complete sequence Length = 116894 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 cagggaggtcgaccttgagg 252 |||||||||||||||||||| Sbjct: 104951 cagggaggtcgaccttgagg 104932 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 cagggaggtcgaccttgagg 252 |||||||||||||||||||| Sbjct: 52902 cagggaggtcgaccttgagg 52883
>gb|AC139426.2| Homo sapiens chromosome 15, clone RP13-395E19, complete sequence Length = 188448 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 cagggaggtcgaccttgagg 252 |||||||||||||||||||| Sbjct: 6565 cagggaggtcgaccttgagg 6546
>gb|AC135983.4| Homo sapiens chromosome 15, clone RP11-632K20, complete sequence Length = 173389 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 cagggaggtcgaccttgagg 252 |||||||||||||||||||| Sbjct: 53809 cagggaggtcgaccttgagg 53828 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 cagggaggtcgaccttgagg 252 |||||||||||||||||||| Sbjct: 1463 cagggaggtcgaccttgagg 1482
>gb|AC084556.1|CBRG35F02 Caenorhabditis briggsae cosmid G35F02, complete sequence Length = 41330 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 36593 ctcctcctcctcctcatctc 36612
>emb|BX930048.1| Gallus gallus finished cDNA, clone ChEST980c22 Length = 1151 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 442 agctcggcctcccgccggccgcgg 465 ||||||||| |||||||||||||| Sbjct: 87 agctcggccccccgccggccgcgg 110
>gb|AC120045.19| Homo sapiens chromosome 15, clone RP11-932O9, complete sequence Length = 188596 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 cagggaggtcgaccttgagg 252 |||||||||||||||||||| Sbjct: 118100 cagggaggtcgaccttgagg 118081 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 cagggaggtcgaccttgagg 252 |||||||||||||||||||| Sbjct: 66004 cagggaggtcgaccttgagg 65985
>gb|AC137568.8| Homo sapiens chromosome 15, clone RP11-1217C12, complete sequence Length = 199045 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 cagggaggtcgaccttgagg 252 |||||||||||||||||||| Sbjct: 63112 cagggaggtcgaccttgagg 63093
>ref|NM_011945.1| Mus musculus mitogen activated protein kinase kinase kinase 1 (Map3k1), mRNA Length = 5253 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 tggagagctcctcctcctcc 185 |||||||||||||||||||| Sbjct: 118 tggagagctcctcctcctcc 99
>gb|AC107977.13| Homo sapiens chromosome 15, clone CTD-2611K5, complete sequence Length = 152619 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 cagggaggtcgaccttgagg 252 |||||||||||||||||||| Sbjct: 112368 cagggaggtcgaccttgagg 112349
>ref|XM_220810.3| PREDICTED: Rattus norvegicus T-box 2 (predicted) (Tbx2_predicted), mRNA Length = 2379 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 tgcggagcctggagaaggag 374 |||||||||||||||||||| Sbjct: 1499 tgcggagcctggagaaggag 1518
>ref|XM_220207.3| PREDICTED: Rattus norvegicus serine/arginine repetitive matrix 2 (predicted) (Srrm2_predicted), mRNA Length = 5671 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 4771 agctcctcctcctcctcatc 4790
>gb|AC126610.12| Homo sapiens chromosome 15, clone RP11-733O21, complete sequence Length = 170362 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 cagggaggtcgaccttgagg 252 |||||||||||||||||||| Sbjct: 72225 cagggaggtcgaccttgagg 72244
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 cccgaggacctgctcgacct 304 |||||||||||||||||||| Sbjct: 4059759 cccgaggacctgctcgacct 4059778
>gb|AY208911.1| Homo sapiens v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian) (ERBB2) gene, complete cds Length = 30837 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 ccggaggcggaggctgccaa 274 |||||||||||||||||||| Sbjct: 1815 ccggaggcggaggctgccaa 1796
>gb|AF244917.1|AF244917 Mus musculus T-box 2 (Tbx2) gene, complete cds Length = 9844 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 tgcggagcctggagaaggag 374 |||||||||||||||||||| Sbjct: 6098 tgcggagcctggagaaggag 6117
>gb|AC111164.6| Homo sapiens chromosome 15, clone RP11-1109N12, complete sequence Length = 144563 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 cagggaggtcgaccttgagg 252 |||||||||||||||||||| Sbjct: 48267 cagggaggtcgaccttgagg 48286
>gb|AC055876.16| Homo sapiens chromosome 15, clone RP11-578F21, complete sequence Length = 192533 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 cagggaggtcgaccttgagg 252 |||||||||||||||||||| Sbjct: 51831 cagggaggtcgaccttgagg 51850
>gb|AF247194.1|AF247194 Drosophila melanogaster ruby (rb) mRNA, complete cds Length = 4784 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctctgct 196 |||||||||||||||||| ||||| Sbjct: 2579 ctcctcctcctcctcatcgctgct 2556
>dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0020D05 Length = 158760 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 tcctcctcctcctcatctct 193 |||||||||||||||||||| Sbjct: 63303 tcctcctcctcctcatctct 63284
>dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485B12 Length = 156047 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 ctcctcctcctcctcatctc 192 |||||||||||||||||||| Sbjct: 123346 ctcctcctcctcctcatctc 123327
>dbj|AP005567.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1254_E07 Length = 124028 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 462 gcgggggcgtcgtcctcgtc 481 |||||||||||||||||||| Sbjct: 55896 gcgggggcgtcgtcctcgtc 55877
>dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0515E01 Length = 140063 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 462 gcgggggcgtcgtcctcgtc 481 |||||||||||||||||||| Sbjct: 3907 gcgggggcgtcgtcctcgtc 3888
>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0036E06 Length = 137926 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 21534 agctcctcctcctcctcatc 21553
>dbj|BS000197.1| Pan troglodytes chromosome 22 clone:PTB-108M20, map 22, complete sequences Length = 192863 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 agagctcctcctcctcctca 188 |||||||||||||||||||| Sbjct: 14272 agagctcctcctcctcctca 14291
>dbj|BS000196.1| Pan troglodytes chromosome 22 clone:RP43-025M10, map 22, complete sequences Length = 196989 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 agagctcctcctcctcctca 188 |||||||||||||||||||| Sbjct: 192896 agagctcctcctcctcctca 192915
>gb|AE005029.1| Halobacterium sp. NRC-1 section 60 of 170 of the complete genome Length = 12664 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 311 cgacgacaccgacgccgcgg 330 |||||||||||||||||||| Sbjct: 1795 cgacgacaccgacgccgcgg 1776
>dbj|AP005608.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0008C07 Length = 146008 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 gggccggaggcggaggctgc 271 |||||||||||||||||||| Sbjct: 70511 gggccggaggcggaggctgc 70530
>dbj|AP004090.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1399_H05 Length = 147670 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 100298 agctcctcctcctcctcatc 100317
>gb|AC004460.1|AC004460 Homo sapiens PAC clone RP5-1086D14, complete sequence Length = 113803 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 233 cagggaggtcgaccttgagg 252 |||||||||||||||||||| Sbjct: 56236 cagggaggtcgaccttgagg 56217
>dbj|AK072590.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131L22, full insert sequence Length = 1754 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 agctcctcctcctcctcatc 190 |||||||||||||||||||| Sbjct: 41 agctcctcctcctcctcatc 60
>gb|AC112670.11| Mus musculus chromosome 7, clone RP24-298H10, complete sequence Length = 161683 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 213 ggcggcagcggcaagaggggcagg 236 |||| ||||||||||||||||||| Sbjct: 134302 ggcgtcagcggcaagaggggcagg 134325 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,405,361 Number of Sequences: 3902068 Number of extensions: 6405361 Number of successful extensions: 531315 Number of sequences better than 10.0: 294 Number of HSP's better than 10.0 without gapping: 300 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 525428 Number of HSP's gapped (non-prelim): 5830 length of query: 546 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 523 effective length of database: 17,143,297,704 effective search space: 8965944699192 effective search space used: 8965944699192 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
