ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart53c02 |
|---|---|
| Clone Library Name | barley_pub |
>SPT6H_CAEEL (P34703) Suppressor of Ty 6 homolog (Abnormal embryogenesis protein| 5) Length = 1521 Score = 32.7 bits (73), Expect = 0.47 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Frame = +1 Query: 322 ERGGDRGENKEDAGAGDKSNWMSTAQLWTGDSVRGD-DASEKQDERRR 462 ERG D G+ ++D G GD+ + S ++ D + D DA + +R R Sbjct: 140 ERGSDDGDRRKDRGRGDRGGYGSESERSEDDFIEDDGDAPRRHRKRHR 187
>IF2_VIBPA (Q87M02) Translation initiation factor IF-2| Length = 905 Score = 32.3 bits (72), Expect = 0.62 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 2/98 (2%) Frame = +1 Query: 175 EAPAAAMDDCIRRLEEEKSKI--EVFRRELPLCARLLADVIDVMKKEVEEKERGGDRGEN 348 EA A + R EE ++ E +RE A+ A+ D +K+E EEK + + Sbjct: 106 EAKREAEEVAKREAEEAAKRVAEETAKREAEEAAKREAE--DAVKREAEEKAKREAEEKA 163 Query: 349 KEDAGAGDKSNWMSTAQLWTGDSVRGDDASEKQDERRR 462 K DA + N A+ + ++ + A ++ DE +R Sbjct: 164 KRDADTNAQRNAEEKAKRDAEEKIKQEAARKEADELKR 201
>EVC_HUMAN (P57679) Ellis-van Creveld syndrome protein (DWF-1)| Length = 992 Score = 32.0 bits (71), Expect = 0.80 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%) Frame = +1 Query: 256 LPLCARLLADVIDVMKKEVEEKERGGDRGENKEDAGAGDK-SNWMSTAQLWTGDSVRGDD 432 LP LL + +K+ +ERG N ED +GD+ S +S+ +L +S GD Sbjct: 920 LPAKRGLLEKPLRTKRKKPLPQERGDLGVPNNEDLASGDQTSGSLSSKRLSQQESEAGDS 979 Query: 433 ASEKQDERRRS 465 + K+ +RRS Sbjct: 980 GNSKKMLKRRS 990
>PFDA_HALMA (Q5UY26) Prefoldin alpha subunit (GimC alpha subunit)| Length = 154 Score = 31.6 bits (70), Expect = 1.0 Identities = 24/104 (23%), Positives = 46/104 (44%), Gaps = 2/104 (1%) Frame = +1 Query: 19 TFSCNKSVKIPFGAPVRCKPNPMGLDVGEIGMGADLSLDLKMFAAKSLGRAREAPAAAMD 198 T +V++P G + +D + +G S + + A S E +D Sbjct: 54 TLDSGSTVQVPLGGDAYIRATIEDIDEVVVSLGGGYSAEREQDGAVS---TLETKKETLD 110 Query: 199 DCIRRLEEEKSKIEVFRRELPLCARLL--ADVIDVMKKEVEEKE 324 D I L+EEK+++E EL A+ + + +M+++ +E E Sbjct: 111 DHISDLQEEKAEVETEMEELEQQAQQMQQQQMQQMMQQQEQEDE 154
>RPC7_HUMAN (O15318) DNA-directed RNA polymerase III 32 kDa polypeptide (EC| 2.7.7.6) (RNA polymerase III C32 subunit) Length = 233 Score = 31.6 bits (70), Expect = 1.0 Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 3/61 (4%) Frame = +1 Query: 277 LADVIDVMKKEVEEKERG-GDRG--ENKEDAGAGDKSNWMSTAQLWTGDSVRGDDASEKQ 447 L + DV+KK VE ++RG G++ EN+E G+ +KS GD DDA+E++ Sbjct: 135 LTNTEDVLKKMVELEKRGDGEKSDEENEEKEGSKEKSK--------EGDDDDDDDAAEQE 186 Query: 448 D 450 + Sbjct: 187 E 187
>CNGB1_BOVIN (Q28181) 240 kDa protein of rod photoreceptor CNG-channel| [Contains: Glutamic acid-rich protein (GARP); Cyclic-nucleotide-gated cation channel 4 (CNG channel 4) (CNG-4) (Cyclic nucleotide-gated cation channel modulatory subunit)] Length = 1394 Score = 31.6 bits (70), Expect = 1.0 Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 5/87 (5%) Frame = +1 Query: 217 EEEKSKI-EVFRRELPLCARLLADVIDVMKKEVEEKERGGDR----GENKEDAGAGDKSN 381 +EEK K+ E RELP D + + EE+E G ++ GE KE+ +K Sbjct: 336 DEEKGKVVEQTPRELPRIQEEKEDEEEEKEDGEEEEEEGREKEEEEGEEKEEEEGREKEE 395 Query: 382 WMSTAQLWTGDSVRGDDASEKQDERRR 462 + G ++ EK+DE R Sbjct: 396 EEGEKKEEEGREKEEEEGGEKEDEEGR 422
>DEP1_YEAST (P31385) Protein DEP1| Length = 420 Score = 30.8 bits (68), Expect = 1.8 Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 4/80 (5%) Frame = +1 Query: 154 KSLGRAREAPAAAMDDCIRRL----EEEKSKIEVFRRELPLCARLLADVIDVMKKEVEEK 321 +SL R E A+D+ + E++SK E +EL + ID +K + + Sbjct: 85 ESLKRPHEDEKEAIDEAKKMKVPGENEDESKEEEKSQELE-------EAIDSKEKSTDAR 137 Query: 322 ERGGDRGENKEDAGAGDKSN 381 + GD G+N+E+ D N Sbjct: 138 DEQGDEGDNEEENNEEDNEN 157
>MUTS2_AQUAE (O67287) MutS2 protein| Length = 762 Score = 30.8 bits (68), Expect = 1.8 Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 3/72 (4%) Frame = +1 Query: 148 AAKSLGRAREAPAAAMD---DCIRRLEEEKSKIEVFRRELPLCARLLADVIDVMKKEVEE 318 A + +G E AM+ D +++ EEE K+E R+EL + + ++ ++KE EE Sbjct: 502 AKRHVGEFGEQYIKAMEKLSDYVKKYEEEFRKLEELRKEL----QKEKEEVEKLRKEYEE 557 Query: 319 KERGGDRGENKE 354 +R G + KE Sbjct: 558 AKRKGWKEAYKE 569
>IWS1A_XENLA (Q6DE96) IWS1-like protein A| Length = 836 Score = 30.4 bits (67), Expect = 2.3 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 9/70 (12%) Frame = +1 Query: 280 ADVIDVMKKEVEEKERGGDRGENK---------EDAGAGDKSNWMSTAQLWTGDSVRGDD 432 +D +D K + E + G++ K ED A DKS + L G+ D Sbjct: 377 SDKVDGKKLQASESDEEGEKASKKKKSNIVSDSEDEDAADKSGNKKSRILSDGEDSDSDA 436 Query: 433 ASEKQDERRR 462 ASEK ++++ Sbjct: 437 ASEKPKQKKK 446
>MYH14_HUMAN (Q7Z406) Myosin-14 (Myosin heavy chain, nonmuscle IIc) (Nonmuscle| myosin heavy chain IIc) (NMHC II-C) Length = 1995 Score = 30.4 bits (67), Expect = 2.3 Identities = 17/65 (26%), Positives = 30/65 (46%) Frame = +1 Query: 160 LGRAREAPAAAMDDCIRRLEEEKSKIEVFRRELPLCARLLADVIDVMKKEVEEKERGGDR 339 L R R +DD LE+++ + ++ +LLA+ + + VEE+ER Sbjct: 1435 LERGRRRLQQELDDATMDLEQQRQLVSTLEKKQRKFDQLLAEEKAAVLRAVEERERAEAE 1494 Query: 340 GENKE 354 G +E Sbjct: 1495 GRERE 1499
>GOGA4_HUMAN (Q13439) Golgin subfamily A member 4 (Trans-Golgi p230) (256 kDa| golgin) (Golgin-245) (Protein 72.1) Length = 2230 Score = 30.4 bits (67), Expect = 2.3 Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Frame = +1 Query: 130 LDLKMFAAKSLGRAREAPAAAMDDCIRRLEEEKSKIEV-FRRELPLCARLLADVIDVMKK 306 L+ + A+ AR A MD+ I+ +E+ + + ++EL +R+ +V+DVMKK Sbjct: 416 LEKALSTAQKTEEARRKLKAEMDEQIKTIEKTSEEERISLQQEL---SRVKQEVVDVMKK 472 Query: 307 EVEEK 321 EE+ Sbjct: 473 SSEEQ 477
>FAM9A_HUMAN (Q8IZU1) Protein FAM9A| Length = 332 Score = 30.0 bits (66), Expect = 3.1 Identities = 23/77 (29%), Positives = 34/77 (44%) Frame = +1 Query: 148 AAKSLGRAREAPAAAMDDCIRRLEEEKSKIEVFRRELPLCARLLADVIDVMKKEVEEKER 327 AA A EA AAA + + EEE+ K E +E ++E E+E Sbjct: 199 AAAEAAAAAEAAAAAAEVIVVEDEEEEEKEEEEEKE--------------EEEEEGEEEG 244 Query: 328 GGDRGENKEDAGAGDKS 378 GG+ GE G G+++ Sbjct: 245 GGEEGEEGGGGGEGEET 261
>NSBP1_HUMAN (P82970) Nucleosome-binding protein 1| Length = 282 Score = 30.0 bits (66), Expect = 3.1 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%) Frame = +1 Query: 292 DVMKKEVEEKERGGDRGENKEDAGAGDK-SNWMSTAQLWTGDSVRGDDASEKQDERR 459 +V +E ++KE D+ E K +AG DK + + +G+DA EK+D ++ Sbjct: 122 EVKNEEEDQKEDEEDQNEEKGEAGKEDKDEKGEEDGKEDKNGNEKGEDAKEKEDGKK 178
>FLNB_MOUSE (Q80X90) Filamin-B (FLN-B) (Beta-filamin) (Actin-binding-like| protein) (ABP-280-like protein) Length = 2602 Score = 30.0 bits (66), Expect = 3.1 Identities = 15/48 (31%), Positives = 23/48 (47%) Frame = +1 Query: 61 PVRCKPNPMGLDVGEIGMGADLSLDLKMFAAKSLGRAREAPAAAMDDC 204 P + K + GL+ G +G A+ ++D K LG E P A +C Sbjct: 1040 PTKVKAHGPGLEGGLVGKPAEFTIDTKGAGTGGLGLTVEGPCEAKIEC 1087
>YD186_YEAST (P48568) Hypothetical 32.2 kDa protein in PPH22-VMA1 intergenic| region Length = 277 Score = 29.6 bits (65), Expect = 4.0 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = +1 Query: 40 VKIPFGAPVRCKPNPMGLDVGEIGMGADLSL 132 V P+ AP R K NP V EIG G +LS+ Sbjct: 183 VLFPYEAPTRTKQNPAERKVIEIGDGEELSI 213
>TOP2_DROME (P15348) DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II)| Length = 1447 Score = 29.6 bits (65), Expect = 4.0 Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 5/66 (7%) Frame = +1 Query: 196 DDCIRRLEEEKSKIEVFRRELPLCARLLADVIDVMKK---EVEEKERGGDRGENKEDAGA 366 ++ +++ + + S++E R++ P L D +D ++ EVEEKER ++G N + A A Sbjct: 1140 NELLKQRDTKLSELESLRKKTP--EMLWLDDLDALESKLNEVEEKERAEEQGINLKTAKA 1197 Query: 367 --GDKS 378 G KS Sbjct: 1198 LKGQKS 1203
>PFDA_AQUAE (O66961) Putative prefoldin alpha subunit| Length = 149 Score = 29.6 bits (65), Expect = 4.0 Identities = 24/106 (22%), Positives = 44/106 (41%) Frame = +1 Query: 34 KSVKIPFGAPVRCKPNPMGLDVGEIGMGADLSLDLKMFAAKSLGRAREAPAAAMDDCIRR 213 K V IP GA + K G+D + +G +S + D+ + R Sbjct: 64 KEVLIPVGATAQIKAKSEGVDEVIMSIGTGIS-----------------AVMSYDEAVDR 106 Query: 214 LEEEKSKIEVFRRELPLCARLLADVIDVMKKEVEEKERGGDRGENK 351 + +E + +E RR L +AD+ + +++ +EE + G K Sbjct: 107 IRKEIAALEALRRAL---EEAIADLYNKIEELLEEVRKVGQEEAKK 149
>BICD_DROME (P16568) Cytoskeleton-like bicaudal D protein| Length = 782 Score = 29.6 bits (65), Expect = 4.0 Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 6/89 (6%) Frame = +1 Query: 109 GMGADLSLDLKMFAAKSLGRAREAPAAAMDDCIRRLEEEKSKIEVFRRELPLCARLLA-- 282 G DL ++ + K L + E+ + L E ++ ++ + EL LA Sbjct: 313 GTKCDLFSEIHLNELKKLEKQLESMESEKTHLTANLREAQTSLDKSQNELQNFMSRLALL 372 Query: 283 ----DVIDVMKKEVEEKERGGDRGENKED 357 D + +KK+++ KE+G + G+ K++ Sbjct: 373 AAHVDALVQLKKQIDVKEQGKEGGQKKDE 401
>PP220_ASFB7 (Q08358) Polyprotein pp220 (220 kDa polyprotein) [Contains: p34;| p14; p37; p150] Length = 2474 Score = 29.6 bits (65), Expect = 4.0 Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 3/84 (3%) Frame = +1 Query: 124 LSLDLKMFAAKSLGRAREAPAAAMDD--CIRRLEEEKSKIEV-FRRELPLCARLLADVID 294 ++LDL + + ARE + ++ + EE+SKI+ F+ C+RLL +ID Sbjct: 440 IALDLSLIGFYTNAAAREERETFLTQFMLVKNVLEEQSKIDPNFKNLYDSCSRLL-QIID 498 Query: 295 VMKKEVEEKERGGDRGENKEDAGA 366 V++K GG+ E GA Sbjct: 499 FYTDIVQKKYGGGEDCECTRVGGA 522
>UBF1_RAT (P25977) Nucleolar transcription factor 1 (Upstream-binding factor| 1) (UBF-1) Length = 764 Score = 29.6 bits (65), Expect = 4.0 Identities = 17/47 (36%), Positives = 22/47 (46%) Frame = +1 Query: 313 EEKERGGDRGENKEDAGAGDKSNWMSTAQLWTGDSVRGDDASEKQDE 453 EE+E + G++ ED G D S S + GD DD E DE Sbjct: 691 EEEEEDDENGDSSEDGG--DSSESSSEDESEDGDENEDDDDDEDDDE 735
>UBF1_HUMAN (P17480) Nucleolar transcription factor 1 (Upstream-binding factor| 1) (UBF-1) (Autoantigen NOR-90) Length = 764 Score = 29.3 bits (64), Expect = 5.2 Identities = 18/57 (31%), Positives = 26/57 (45%) Frame = +1 Query: 283 DVIDVMKKEVEEKERGGDRGENKEDAGAGDKSNWMSTAQLWTGDSVRGDDASEKQDE 453 D D ++ +E+E + G++ ED G D S S + GD DD E DE Sbjct: 681 DEEDEDDEDEDEEEEDDENGDSSEDGG--DSSESSSEDESEDGDENEEDDEDEDDDE 735
>EGFL7_HUMAN (Q9UHF1) EGF-like domain-containing protein 7 precursor (Multiple| EGF-like domain protein 7) (Multiple epidermal growth factor-like domain protein 7) (Vascular endothelial statin) (VE-statin) (NOTCH4-like protein) (ZNEU1) Length = 273 Score = 29.3 bits (64), Expect = 5.2 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = +1 Query: 16 HTFSCNKSVKIPFGAPVRCKPNPMGLD 96 H+ S + ++ +P G P R PNP G+D Sbjct: 167 HSLSADGTLCVPKGGPPRVAPNPTGVD 193
>FLNB_HUMAN (O75369) Filamin-B (FLN-B) (Beta-filamin) (Actin-binding-like| protein) (Thyroid autoantigen) (Truncated actin-binding protein) (Truncated ABP) (ABP-280 homolog) (ABP-278) (Filamin 3) (Filamin homolog 1) (Fh1) Length = 2602 Score = 29.3 bits (64), Expect = 5.2 Identities = 15/48 (31%), Positives = 23/48 (47%) Frame = +1 Query: 61 PVRCKPNPMGLDVGEIGMGADLSLDLKMFAAKSLGRAREAPAAAMDDC 204 P + K + GL+ G +G A+ ++D K LG E P A +C Sbjct: 1040 PSKVKAHGPGLEGGLVGKPAEFTIDTKGAGTGGLGLTVEGPCEAKIEC 1087
>PCP1_SCHPO (Q92351) Spindle pole body protein pcp1| Length = 1208 Score = 28.9 bits (63), Expect = 6.8 Identities = 27/98 (27%), Positives = 41/98 (41%), Gaps = 20/98 (20%) Frame = +1 Query: 127 SLDLKMFAAKS--LGRAREAPAAAMDDCIRRLEEEKSKIEV---------------FRRE 255 S ++K+F + L A E D +EE+KS EV E Sbjct: 241 SQNVKVFTERIRFLENALEKVQREKDSLSTEMEEDKSNKEVDYEYEIRQLQNRLDELSEE 300 Query: 256 LPLCARLLA---DVIDVMKKEVEEKERGGDRGENKEDA 360 L + LL D I +K+++EEKE EN+E++ Sbjct: 301 LDVAQDLLTEKEDEIATLKRQIEEKENSSSAFENEENS 338
>AFAD_RAT (O35889) Afadin (Af-6 protein)| Length = 1829 Score = 28.9 bits (63), Expect = 6.8 Identities = 14/56 (25%), Positives = 24/56 (42%) Frame = +1 Query: 286 VIDVMKKEVEEKERGGDRGENKEDAGAGDKSNWMSTAQLWTGDSVRGDDASEKQDE 453 ++D++ KE+ E + GDR + D W +L DD E+ D+ Sbjct: 1537 IVDMLSKEIHELQNKGDRTAEESDRLRKLMLEWQFQKRLQESKQKDEDDDEEEDDD 1592
>SYA_DEHE1 (Q3ZAE4) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 871 Score = 28.9 bits (63), Expect = 6.8 Identities = 22/64 (34%), Positives = 27/64 (42%) Frame = +1 Query: 163 GRAREAPAAAMDDCIRRLEEEKSKIEVFRRELPLCARLLADVIDVMKKEVEEKERGGDRG 342 GR EA D L E +E E P L + ID +KK V+ ER RG Sbjct: 699 GREAEAYINLQQDS---LSELSGMLEAAPEESPRKLAELKEEIDTLKKTVQNLERQMSRG 755 Query: 343 ENKE 354 E +E Sbjct: 756 EAEE 759
>YTDC1_RAT (Q9QY02) YTH domain-containing protein 1 (Putative splicing factor| YT521) (RA301-binding protein) Length = 738 Score = 28.9 bits (63), Expect = 6.8 Identities = 14/52 (26%), Positives = 25/52 (48%) Frame = +1 Query: 307 EVEEKERGGDRGENKEDAGAGDKSNWMSTAQLWTGDSVRGDDASEKQDERRR 462 E ++KE G D E + +G +S + + +G G D +K+ +R R Sbjct: 257 ERDQKEEGNDYDTRSEASDSGSESVSFTDGSVRSGSGTDGSDEKKKERKRAR 308
>YTDC1_HUMAN (Q96MU7) YTH domain-containing protein 1 (Putative splicing factor| YT521) Length = 727 Score = 28.9 bits (63), Expect = 6.8 Identities = 14/52 (26%), Positives = 25/52 (48%) Frame = +1 Query: 307 EVEEKERGGDRGENKEDAGAGDKSNWMSTAQLWTGDSVRGDDASEKQDERRR 462 E ++KE G D E + +G +S + + +G G D +K+ +R R Sbjct: 254 ERDQKEEGNDYDTRSEASDSGSESVSFTDGSVRSGSGTDGSDEKKKERKRAR 305
>YKD1_CAEEL (Q03560) Hypothetical protein B0464.2 in chromosome III| Length = 1150 Score = 28.9 bits (63), Expect = 6.8 Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 6/91 (6%) Frame = +1 Query: 208 RRLEEEKSKIEVFRRELPLCARLLADVIDVMK------KEVEEKERGGDRGENKEDAGAG 369 + +EE ++K E +++L L I++ K + VEEK RGG + + D G Sbjct: 892 KMIEEARAKEEAEKQKLEDMKNLRLSFIEMTKDVLRLPEIVEEKRRGGGGRKRRNDDG-D 950 Query: 370 DKSNWMSTAQLWTGDSVRGDDASEKQDERRR 462 + N S A + G+ G + E+++ R++ Sbjct: 951 EFVNDSSDAGNYDGE--EGGEDGERRERRKK 979
>ASPX_MOUSE (P50289) Acrosomal protein SP-10 precursor (Acrosomal vesicle| protein 1) (MSA-63) Length = 261 Score = 28.9 bits (63), Expect = 6.8 Identities = 23/109 (21%), Positives = 48/109 (44%), Gaps = 7/109 (6%) Frame = +1 Query: 160 LGRAREAPAAAMDDCIRRLEEEKSKIEVFRRELPLCARLLADVIDVMKKEVEEKERGGDR 339 LG A+ AP ++ + ++++ S ++ L L +D + + ++EK G Sbjct: 12 LGSAQGAPPGQPEELLDSVDQQASVQQLSSEYLSLANP--SDAEALYETPLDEKTLSGHS 69 Query: 340 GENKEDA-------GAGDKSNWMSTAQLWTGDSVRGDDASEKQDERRRS 465 +E + AG+ S+ +++ +GD + G+ SE E S Sbjct: 70 SSEQESSEHAVAEHSAGEHSSGEQSSEHMSGDHMSGEHLSEHTSEEHSS 118
>CPCE_ANASP (P07125) Phycocyanobilin lyase alpha subunit (EC 4.-.-.-)| (Phycocyanin operon protein cpcE) Length = 276 Score = 28.5 bits (62), Expect = 8.9 Identities = 15/38 (39%), Positives = 23/38 (60%) Frame = +1 Query: 130 LDLKMFAAKSLGRAREAPAAAMDDCIRRLEEEKSKIEV 243 L L+ +AA LG+ R +AA+D I LE+E + E+ Sbjct: 31 LSLRYYAAWWLGKYRVKESAAVDALIAALEDEADRTEL 68
>RGS3_MOUSE (Q9DC04) Regulator of G-protein signaling 3 (RGS3) (C2PA)| Length = 966 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 4/57 (7%) Frame = +1 Query: 304 KEVEEKERGGDRGENKEDAGA----GDKSNWMSTAQLWTGDSVRGDDASEKQDERRR 462 ++ EE E GG+ E++ED + GD+S ++ + TG G + Q+ RR Sbjct: 652 EDAEEGEEGGEGEEDEEDDTSDDNYGDRSEAKRSSLIETGQGAEGGFSLRVQNSLRR 708
>R1C3_SOLDE (Q6L3N7) Putative late blight resistance protein homolog R1C-3| Length = 1292 Score = 28.5 bits (62), Expect = 8.9 Identities = 19/66 (28%), Positives = 30/66 (45%) Frame = +1 Query: 130 LDLKMFAAKSLGRAREAPAAAMDDCIRRLEEEKSKIEVFRRELPLCARLLADVIDVMKKE 309 L L+MF + E + C L + +I +LPL L+A ++ M+KE Sbjct: 663 LHLRMFDEVESWKLLEKKVFGEESCSPLLRDIGQRIAKMCGQLPLSIVLVAGILSEMEKE 722 Query: 310 VEEKER 327 VE E+ Sbjct: 723 VEYWEQ 728
>SYA_AQUAE (O67323) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 867 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/61 (27%), Positives = 35/61 (57%) Frame = +1 Query: 154 KSLGRAREAPAAAMDDCIRRLEEEKSKIEVFRRELPLCARLLADVIDVMKKEVEEKERGG 333 ++L +A A ++ I+++EE K +I+ RE+ RL +++ + +EV ++E G Sbjct: 707 QTLKKASSALGVGEEEVIQKIEELKEEIKDREREI---QRLKQELLKLQIREVVKEENVG 763 Query: 334 D 336 D Sbjct: 764 D 764
>MYH14_MOUSE (Q6URW6) Myosin-14 (Myosin heavy chain, nonmuscle IIc) (Nonmuscle| myosin heavy chain IIc) (NMHC II-C) Length = 2000 Score = 28.5 bits (62), Expect = 8.9 Identities = 19/72 (26%), Positives = 33/72 (45%) Frame = +1 Query: 139 KMFAAKSLGRAREAPAAAMDDCIRRLEEEKSKIEVFRRELPLCARLLADVIDVMKKEVEE 318 K A + L RAR +DD L ++K + ++ +LLA+ + + VE+ Sbjct: 1432 KTEAVERLERARRRLQQELDDATVDLGQQKQLLSTLEKKQRKFDQLLAEEKAAVLRAVED 1491 Query: 319 KERGGDRGENKE 354 +ER G +E Sbjct: 1492 RERIEAEGRERE 1503
>IMUA_CAUCR (Q9A3J1) Protein imuA| Length = 244 Score = 28.5 bits (62), Expect = 8.9 Identities = 15/39 (38%), Positives = 21/39 (53%) Frame = -1 Query: 182 GASLARPRLLAANIFKSRLKSAPMPISPTSRPIGLGLQR 66 G + +PRL++ + SR + AP P P IGLG R Sbjct: 155 GRAGGKPRLVSGSASFSRWRIAPAPSGPPPDDIGLGPPR 193
>VG48_SHV21 (Q01033) Hypothetical gene 48 protein| Length = 797 Score = 28.5 bits (62), Expect = 8.9 Identities = 14/49 (28%), Positives = 23/49 (46%) Frame = +1 Query: 307 EVEEKERGGDRGENKEDAGAGDKSNWMSTAQLWTGDSVRGDDASEKQDE 453 E +EKE G D G++ ED G + + G+D +++DE Sbjct: 427 EKDEKEEGEDEGDDGEDEGEDEGEDEGDEGDEGDEGEDEGEDEDDEEDE 475
>LMNA_CHICK (P13648) Lamin-A| Length = 657 Score = 28.5 bits (62), Expect = 8.9 Identities = 18/74 (24%), Positives = 35/74 (47%) Frame = +1 Query: 133 DLKMFAAKSLGRAREAPAAAMDDCIRRLEEEKSKIEVFRRELPLCARLLADVIDVMKKEV 312 DL+ AK G EA D+ +RR++ E ++++ + EL + ++ + K+ Sbjct: 163 DLRAQVAKLEGALSEAKKQLQDEMLRRVDAE-NRLQTLKEELEFQKNIYSEELRETKRRH 221 Query: 313 EEKERGGDRGENKE 354 E + D G +E Sbjct: 222 ETRLVEIDNGRQQE 235
>GAG_MLVMO (P03332) Gag polyprotein [Contains: Core protein p15; Inner coat| protein p12; Core shell protein p30; Nucleoprotein p10] Length = 537 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/59 (28%), Positives = 31/59 (52%) Frame = +1 Query: 208 RRLEEEKSKIEVFRRELPLCARLLADVIDVMKKEVEEKERGGDRGENKEDAGAGDKSNW 384 RR E+E+ + E RR ++LLA V+ K++ + ER + + + A +K +W Sbjct: 454 RRTEDEQKEKERDRRRHREMSKLLATVVSGQKQDRQGGERRRSQLDRDQCAYCKEKGHW 512 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.314 0.133 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,725,073 Number of Sequences: 219361 Number of extensions: 946090 Number of successful extensions: 2967 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 2793 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2953 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)
