ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bart52h08 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK103524.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033131K12, full insert sequence Length = 1964 Score = 293 bits (148), Expect = 2e-76 Identities = 263/300 (87%), Gaps = 6/300 (2%) Strand = Plus / Plus Query: 134 gcctcgccgacgagaaggcgccggg---gacgatcggcgtaggccggtacgaggagatgg 190 |||||||| ||||||||||||||| |||| ||||||| ||||| |||| || |||| Sbjct: 142 gcctcgccaacgagaaggcgccggccgagacggtcggcgtcggccgttacgtcgaaatgg 201 Query: 191 agcaagacggcgcc---ccgagcaccgcaaagtcgcggctctccggcctcctgtggcacg 247 |||| ||||||| | || |||||||||||||| |||||||||||||| || ||||||| Sbjct: 202 agcaggacggcggcggacccagcaccgcaaagtcccggctctccggccttctctggcacg 261 Query: 248 gcggctccgcctacgacgcctggttcagctgcgcttccaaccaggtggcccaggtgctcc 307 ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 262 gcggctcagcctacgacgcctggttcagctgcgcgtccaaccaggtggcccaggtgctcc 321 Query: 308 tgaccttgccctactccttctcgcaactggggatggtgagcggcatactgttccagctct 367 |||| |||||||||| ||||| || ||||||||| | |||||||||||||||||||||| Sbjct: 322 tgacgctgccctactcgttctcccagctggggatgctcagcggcatactgttccagctct 381 Query: 368 tctacggcctcatggggagctggaccgcctacctcatcagcatcctctacgtggagtaca 427 ||||||| || |||| |||||||| || || |||||||||||||| ||||||||||||| Sbjct: 382 tctacgggctgttgggcagctggacggcgtatctcatcagcatcctgtacgtggagtaca 441
>gb|AY109836.1| Zea mays CL468_-5 mRNA sequence Length = 884 Score = 276 bits (139), Expect = 6e-71 Identities = 190/207 (91%) Strand = Plus / Plus Query: 217 aagtcgcggctctccggcctcctgtggcacggcggctccgcctacgacgcctggttcagc 276 |||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||| Sbjct: 209 aagtcgcggctctccggcctgctctggcacggcggctccgcctacgacgcttggttcagc 268 Query: 277 tgcgcttccaaccaggtggcccaggtgctcctgaccttgccctactccttctcgcaactg 336 ||||| |||||||||||||| ||||||||||||||| |||||||||| |||||||||||| Sbjct: 269 tgcgcgtccaaccaggtggctcaggtgctcctgaccctgccctactcgttctcgcaactg 328 Query: 337 gggatggtgagcggcatactgttccagctcttctacggcctcatggggagctggaccgcc 396 |||||| ||||||||||||||||||||||| | ||||| || ||||| |||||||| || Sbjct: 329 gggatgctgagcggcatactgttccagctcctgtacgggctgatgggcagctggacggcg 388 Query: 397 tacctcatcagcatcctctacgtggag 423 |||||||||||| | |||||||||||| Sbjct: 389 tacctcatcagcgttctctacgtggag 415
>dbj|AK111849.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145B14, full insert sequence Length = 1961 Score = 194 bits (98), Expect = 2e-46 Identities = 170/194 (87%) Strand = Plus / Plus Query: 233 gcctcctgtggcacggcggctccgcctacgacgcctggttcagctgcgcttccaaccagg 292 |||||||||||||||||||||||| || |||||||||||||||||||| |||||||||| Sbjct: 307 gcctcctgtggcacggcggctccgtctgggacgcctggttcagctgcgcctccaaccagg 366 Query: 293 tggcccaggtgctcctgaccttgccctactccttctcgcaactggggatggtgagcggca 352 |||| |||||||||||||| |||| |||||||||||||| || |||||| | ||| Sbjct: 367 tggcgcaggtgctcctgacgctgccgtactccttctcgcagctcgggatgctctcgggcc 426 Query: 353 tactgttccagctcttctacggcctcatggggagctggaccgcctacctcatcagcatcc 412 | ||| | ||| | ||||||||||||||||| |||||||||||||||||||||||| ||| Sbjct: 427 tgctgctgcaggtgttctacggcctcatgggcagctggaccgcctacctcatcagcgtcc 486 Query: 413 tctacgtggagtac 426 ||||||| |||||| Sbjct: 487 tctacgtcgagtac 500
>emb|AJ011794.1|ZMA011794 Zea mays mRNA for AUX1 protein Length = 2108 Score = 194 bits (98), Expect = 2e-46 Identities = 182/210 (86%) Strand = Plus / Plus Query: 217 aagtcgcggctctccggcctcctgtggcacggcggctccgcctacgacgcctggttcagc 276 ||||| ||||| || || || |||||||||||||| ||||| |||||||| ||||||||| Sbjct: 177 aagtcccggctgtcgggtctgctgtggcacggcgggtccgcgtacgacgcgtggttcagc 236 Query: 277 tgcgcttccaaccaggtggcccaggtgctcctgaccttgccctactccttctcgcaactg 336 ||||| || ||||||||||| |||||||| ||||| |||||||||| ||| |||| ||| Sbjct: 237 tgcgcgtcgaaccaggtggcgcaggtgctgctgacgctgccctactcgttcgcgcagctg 296 Query: 337 gggatggtgagcggcatactgttccagctcttctacggcctcatggggagctggaccgcc 396 |||||| |||||||| | ||||||||||||||||||||||| |||| |||||||| || Sbjct: 297 gggatgctgagcggcgtgctgttccagctcttctacggcctgctgggcagctggacggcg 356 Query: 397 tacctcatcagcatcctctacgtggagtac 426 ||||| ||||||||||| ||| |||||||| Sbjct: 357 tacctgatcagcatcctgtacctggagtac 386
>gb|AY109689.1| Zea mays CL468_2 mRNA sequence Length = 2108 Score = 194 bits (98), Expect = 2e-46 Identities = 182/210 (86%) Strand = Plus / Plus Query: 217 aagtcgcggctctccggcctcctgtggcacggcggctccgcctacgacgcctggttcagc 276 ||||| ||||| || || || |||||||||||||| ||||| |||||||| ||||||||| Sbjct: 177 aagtcccggctgtcgggtctgctgtggcacggcgggtccgcgtacgacgcgtggttcagc 236 Query: 277 tgcgcttccaaccaggtggcccaggtgctcctgaccttgccctactccttctcgcaactg 336 ||||| || ||||||||||| |||||||| ||||| |||||||||| ||| |||| ||| Sbjct: 237 tgcgcgtcgaaccaggtggcgcaggtgctgctgacgctgccctactcgttcgcgcagctg 296 Query: 337 gggatggtgagcggcatactgttccagctcttctacggcctcatggggagctggaccgcc 396 |||||| |||||||| | ||||||||||||||||||||||| |||| |||||||| || Sbjct: 297 gggatgctgagcggcgtgctgttccagctcttctacggcctgctgggcagctggacggcg 356 Query: 397 tacctcatcagcatcctctacgtggagtac 426 ||||| ||||||||||| ||| |||||||| Sbjct: 357 tacctgatcagcatcctgtacctggagtac 386
>ref|NM_194844.1| Oryza sativa (japonica cultivar-group) putative AUX1-like permease (OSJNBb0016M10.2), mRNA Length = 1644 Score = 178 bits (90), Expect = 1e-41 Identities = 177/206 (85%) Strand = Plus / Plus Query: 221 cgcggctctccggcctcctgtggcacggcggctccgcctacgacgcctggttcagctgcg 280 ||||||| || || || ||||||||||| || || || |||||||| ||||||||||||| Sbjct: 152 cgcggctgtcggggctgctgtggcacggggggtcggcgtacgacgcgtggttcagctgcg 211 Query: 281 cttccaaccaggtggcccaggtgctcctgaccttgccctactccttctcgcaactgggga 340 | || ||||||||||| |||||||| ||||| |||||||||| ||| |||| ||||| | Sbjct: 212 cgtcgaaccaggtggcgcaggtgctgctgacgctgccctactcgttcgcgcagctgggca 271 Query: 341 tggtgagcggcatactgttccagctcttctacggcctcatggggagctggaccgcctacc 400 ||| |||||| | || ||||||||||||||||||||| | || |||||||||||||||| Sbjct: 272 tggccagcggcctcctcttccagctcttctacggcctcctcggcagctggaccgcctacc 331 Query: 401 tcatcagcatcctctacgtggagtac 426 ||||||||||||||||| | |||||| Sbjct: 332 tcatcagcatcctctacctcgagtac 357
>gb|AC091665.3| Oryza sativa chromosome 10 clone OSJNBb0016M10, complete sequence Length = 118101 Score = 178 bits (90), Expect = 1e-41 Identities = 177/206 (85%) Strand = Plus / Minus Query: 221 cgcggctctccggcctcctgtggcacggcggctccgcctacgacgcctggttcagctgcg 280 ||||||| || || || ||||||||||| || || || |||||||| ||||||||||||| Sbjct: 15575 cgcggctgtcggggctgctgtggcacggggggtcggcgtacgacgcgtggttcagctgcg 15516 Query: 281 cttccaaccaggtggcccaggtgctcctgaccttgccctactccttctcgcaactgggga 340 | || ||||||||||| |||||||| ||||| |||||||||| ||| |||| ||||| | Sbjct: 15515 cgtcgaaccaggtggcgcaggtgctgctgacgctgccctactcgttcgcgcagctgggca 15456 Query: 341 tggtgagcggcatactgttccagctcttctacggcctcatggggagctggaccgcctacc 400 ||| |||||| | || ||||||||||||||||||||| | || |||||||||||||||| Sbjct: 15455 tggccagcggcctcctcttccagctcttctacggcctcctcggcagctggaccgcctacc 15396 Query: 401 tcatcagcatcctctacgtggagtac 426 ||||||||||||||||| | |||||| Sbjct: 15395 tcatcagcatcctctacctcgagtac 15370
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 178 bits (90), Expect = 1e-41 Identities = 177/206 (85%) Strand = Plus / Minus Query: 221 cgcggctctccggcctcctgtggcacggcggctccgcctacgacgcctggttcagctgcg 280 ||||||| || || || ||||||||||| || || || |||||||| ||||||||||||| Sbjct: 2834543 cgcggctgtcggggctgctgtggcacggggggtcggcgtacgacgcgtggttcagctgcg 2834484 Query: 281 cttccaaccaggtggcccaggtgctcctgaccttgccctactccttctcgcaactgggga 340 | || ||||||||||| |||||||| ||||| |||||||||| ||| |||| ||||| | Sbjct: 2834483 cgtcgaaccaggtggcgcaggtgctgctgacgctgccctactcgttcgcgcagctgggca 2834424 Query: 341 tggtgagcggcatactgttccagctcttctacggcctcatggggagctggaccgcctacc 400 ||| |||||| | || ||||||||||||||||||||| | || |||||||||||||||| Sbjct: 2834423 tggccagcggcctcctcttccagctcttctacggcctcctcggcagctggaccgcctacc 2834364 Query: 401 tcatcagcatcctctacgtggagtac 426 ||||||||||||||||| | |||||| Sbjct: 2834363 tcatcagcatcctctacctcgagtac 2834338
>dbj|AK102729.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105O21, full insert sequence Length = 2015 Score = 178 bits (90), Expect = 1e-41 Identities = 177/206 (85%) Strand = Plus / Plus Query: 221 cgcggctctccggcctcctgtggcacggcggctccgcctacgacgcctggttcagctgcg 280 ||||||| || || || ||||||||||| || || || |||||||| ||||||||||||| Sbjct: 272 cgcggctgtcggggctgctgtggcacggggggtcggcgtacgacgcgtggttcagctgcg 331 Query: 281 cttccaaccaggtggcccaggtgctcctgaccttgccctactccttctcgcaactgggga 340 | || ||||||||||| |||||||| ||||| |||||||||| ||| |||| ||||| | Sbjct: 332 cgtcgaaccaggtggcgcaggtgctgctgacgctgccctactcgttcgcgcagctgggca 391 Query: 341 tggtgagcggcatactgttccagctcttctacggcctcatggggagctggaccgcctacc 400 ||| |||||| | || ||||||||||||||||||||| | || |||||||||||||||| Sbjct: 392 tggccagcggcctcctcttccagctcttctacggcctcctcggcagctggaccgcctacc 451 Query: 401 tcatcagcatcctctacgtggagtac 426 ||||||||||||||||| | |||||| Sbjct: 452 tcatcagcatcctctacctcgagtac 477
>dbj|AK102295.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089L08, full insert sequence Length = 2106 Score = 178 bits (90), Expect = 1e-41 Identities = 177/206 (85%) Strand = Plus / Plus Query: 221 cgcggctctccggcctcctgtggcacggcggctccgcctacgacgcctggttcagctgcg 280 ||||||| || || || ||||||||||| || || || |||||||| ||||||||||||| Sbjct: 277 cgcggctgtcggggctgctgtggcacggggggtcggcgtacgacgcgtggttcagctgcg 336 Query: 281 cttccaaccaggtggcccaggtgctcctgaccttgccctactccttctcgcaactgggga 340 | || ||||||||||| |||||||| ||||| |||||||||| ||| |||| ||||| | Sbjct: 337 cgtcgaaccaggtggcgcaggtgctgctgacgctgccctactcgttcgcgcagctgggca 396 Query: 341 tggtgagcggcatactgttccagctcttctacggcctcatggggagctggaccgcctacc 400 ||| |||||| | || ||||||||||||||||||||| | || |||||||||||||||| Sbjct: 397 tggccagcggcctcctcttccagctcttctacggcctcctcggcagctggaccgcctacc 456 Query: 401 tcatcagcatcctctacgtggagtac 426 ||||||||||||||||| | |||||| Sbjct: 457 tcatcagcatcctctacctcgagtac 482
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 178 bits (90), Expect = 1e-41 Identities = 177/206 (85%) Strand = Plus / Minus Query: 221 cgcggctctccggcctcctgtggcacggcggctccgcctacgacgcctggttcagctgcg 280 ||||||| || || || ||||||||||| || || || |||||||| ||||||||||||| Sbjct: 2834494 cgcggctgtcggggctgctgtggcacggggggtcggcgtacgacgcgtggttcagctgcg 2834435 Query: 281 cttccaaccaggtggcccaggtgctcctgaccttgccctactccttctcgcaactgggga 340 | || ||||||||||| |||||||| ||||| |||||||||| ||| |||| ||||| | Sbjct: 2834434 cgtcgaaccaggtggcgcaggtgctgctgacgctgccctactcgttcgcgcagctgggca 2834375 Query: 341 tggtgagcggcatactgttccagctcttctacggcctcatggggagctggaccgcctacc 400 ||| |||||| | || ||||||||||||||||||||| | || |||||||||||||||| Sbjct: 2834374 tggccagcggcctcctcttccagctcttctacggcctcctcggcagctggaccgcctacc 2834315 Query: 401 tcatcagcatcctctacgtggagtac 426 ||||||||||||||||| | |||||| Sbjct: 2834314 tcatcagcatcctctacctcgagtac 2834289
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 157 bits (79), Expect = 4e-35 Identities = 124/139 (89%) Strand = Plus / Plus Query: 289 caggtggcccaggtgctcctgaccttgccctactccttctcgcaactggggatggtgagc 348 ||||||||||||||||||||||| |||||||||| ||||| || ||||||||| | ||| Sbjct: 7616680 caggtggcccaggtgctcctgacgctgccctactcgttctcccagctggggatgctcagc 7616739 Query: 349 ggcatactgttccagctcttctacggcctcatggggagctggaccgcctacctcatcagc 408 |||||||||||||||||||||||||| || |||| |||||||| || || ||||||||| Sbjct: 7616740 ggcatactgttccagctcttctacgggctgttgggcagctggacggcgtatctcatcagc 7616799 Query: 409 atcctctacgtggagtaca 427 ||||| ||||||||||||| Sbjct: 7616800 atcctgtacgtggagtaca 7616818 Score = 149 bits (75), Expect = 9e-33 Identities = 145/167 (86%), Gaps = 6/167 (3%) Strand = Plus / Plus Query: 134 gcctcgccgacgagaaggcgccggg---gacgatcggcgtaggccggtacgaggagatgg 190 |||||||| ||||||||||||||| |||| ||||||| ||||| |||| || |||| Sbjct: 7616386 gcctcgccaacgagaaggcgccggccgagacggtcggcgtcggccgttacgtcgaaatgg 7616445 Query: 191 agcaagacggcgcc---ccgagcaccgcaaagtcgcggctctccggcctcctgtggcacg 247 |||| ||||||| | || |||||||||||||| |||||||||||||| || ||||||| Sbjct: 7616446 agcaggacggcggcggacccagcaccgcaaagtcccggctctccggccttctctggcacg 7616505 Query: 248 gcggctccgcctacgacgcctggttcagctgcgcttccaaccaggtg 294 ||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 7616506 gcggctcagcctacgacgcctggttcagctgcgcgtccaaccaggtg 7616552
>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0096L14, from chromosome 3, complete sequence Length = 131142 Score = 157 bits (79), Expect = 4e-35 Identities = 124/139 (89%) Strand = Plus / Minus Query: 289 caggtggcccaggtgctcctgaccttgccctactccttctcgcaactggggatggtgagc 348 ||||||||||||||||||||||| |||||||||| ||||| || ||||||||| | ||| Sbjct: 98610 caggtggcccaggtgctcctgacgctgccctactcgttctcccagctggggatgctcagc 98551 Query: 349 ggcatactgttccagctcttctacggcctcatggggagctggaccgcctacctcatcagc 408 |||||||||||||||||||||||||| || |||| |||||||| || || ||||||||| Sbjct: 98550 ggcatactgttccagctcttctacgggctgttgggcagctggacggcgtatctcatcagc 98491 Query: 409 atcctctacgtggagtaca 427 ||||| ||||||||||||| Sbjct: 98490 atcctgtacgtggagtaca 98472 Score = 149 bits (75), Expect = 9e-33 Identities = 145/167 (86%), Gaps = 6/167 (3%) Strand = Plus / Minus Query: 134 gcctcgccgacgagaaggcgccggg---gacgatcggcgtaggccggtacgaggagatgg 190 |||||||| ||||||||||||||| |||| ||||||| ||||| |||| || |||| Sbjct: 98904 gcctcgccaacgagaaggcgccggccgagacggtcggcgtcggccgttacgtcgaaatgg 98845 Query: 191 agcaagacggcgcc---ccgagcaccgcaaagtcgcggctctccggcctcctgtggcacg 247 |||| ||||||| | || |||||||||||||| |||||||||||||| || ||||||| Sbjct: 98844 agcaggacggcggcggacccagcaccgcaaagtcccggctctccggccttctctggcacg 98785 Query: 248 gcggctccgcctacgacgcctggttcagctgcgcttccaaccaggtg 294 ||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 98784 gcggctcagcctacgacgcctggttcagctgcgcgtccaaccaggtg 98738
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 157 bits (79), Expect = 4e-35 Identities = 124/139 (89%) Strand = Plus / Plus Query: 289 caggtggcccaggtgctcctgaccttgccctactccttctcgcaactggggatggtgagc 348 ||||||||||||||||||||||| |||||||||| ||||| || ||||||||| | ||| Sbjct: 7614515 caggtggcccaggtgctcctgacgctgccctactcgttctcccagctggggatgctcagc 7614574 Query: 349 ggcatactgttccagctcttctacggcctcatggggagctggaccgcctacctcatcagc 408 |||||||||||||||||||||||||| || |||| |||||||| || || ||||||||| Sbjct: 7614575 ggcatactgttccagctcttctacgggctgttgggcagctggacggcgtatctcatcagc 7614634 Query: 409 atcctctacgtggagtaca 427 ||||| ||||||||||||| Sbjct: 7614635 atcctgtacgtggagtaca 7614653 Score = 149 bits (75), Expect = 9e-33 Identities = 145/167 (86%), Gaps = 6/167 (3%) Strand = Plus / Plus Query: 134 gcctcgccgacgagaaggcgccggg---gacgatcggcgtaggccggtacgaggagatgg 190 |||||||| ||||||||||||||| |||| ||||||| ||||| |||| || |||| Sbjct: 7614221 gcctcgccaacgagaaggcgccggccgagacggtcggcgtcggccgttacgtcgaaatgg 7614280 Query: 191 agcaagacggcgcc---ccgagcaccgcaaagtcgcggctctccggcctcctgtggcacg 247 |||| ||||||| | || |||||||||||||| |||||||||||||| || ||||||| Sbjct: 7614281 agcaggacggcggcggacccagcaccgcaaagtcccggctctccggccttctctggcacg 7614340 Query: 248 gcggctccgcctacgacgcctggttcagctgcgcttccaaccaggtg 294 ||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 7614341 gcggctcagcctacgacgcctggttcagctgcgcgtccaaccaggtg 7614387
>ref|NM_190667.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1479 Score = 147 bits (74), Expect = 3e-32 Identities = 158/186 (84%) Strand = Plus / Plus Query: 241 tggcacggcggctccgcctacgacgcctggttcagctgcgcttccaaccaggtggcccag 300 |||||||||||||||| || |||||||||||||||||||| || |||||||| || ||| Sbjct: 151 tggcacggcggctccgtctgggacgcctggttcagctgcgcctctaaccaggtcgcgcag 210 Query: 301 gtgctcctgaccttgccctactccttctcgcaactggggatggtgagcggcatactgttc 360 ||||||||||| |||| |||||||||||||| || |||||| | ||| | ||| | Sbjct: 211 gtgctcctgacgctgccgtactccttctcgcagctcgggatgctctcgggcgtgctgctg 270 Query: 361 cagctcttctacggcctcatggggagctggaccgcctacctcatcagcatcctctacgtg 420 ||||| |||||||| ||||||| ||||||||||||||||| |||||| |||||||||| Sbjct: 271 cagctgttctacggtttcatgggcagctggaccgcctacctaatcagcgtcctctacgtc 330 Query: 421 gagtac 426 |||||| Sbjct: 331 gagtac 336
>dbj|AK103239.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123G17, full insert sequence Length = 1968 Score = 147 bits (74), Expect = 3e-32 Identities = 158/186 (84%) Strand = Plus / Plus Query: 241 tggcacggcggctccgcctacgacgcctggttcagctgcgcttccaaccaggtggcccag 300 |||||||||||||||| || |||||||||||||||||||| || |||||||| || ||| Sbjct: 277 tggcacggcggctccgtctgggacgcctggttcagctgcgcctctaaccaggtcgcgcag 336 Query: 301 gtgctcctgaccttgccctactccttctcgcaactggggatggtgagcggcatactgttc 360 ||||||||||| |||| |||||||||||||| || |||||| | ||| | ||| | Sbjct: 337 gtgctcctgacgctgccgtactccttctcgcagctcgggatgctctcgggcgtgctgctg 396 Query: 361 cagctcttctacggcctcatggggagctggaccgcctacctcatcagcatcctctacgtg 420 ||||| |||||||| ||||||| ||||||||||||||||| |||||| |||||||||| Sbjct: 397 cagctgttctacggtttcatgggcagctggaccgcctacctaatcagcgtcctctacgtc 456 Query: 421 gagtac 426 |||||| Sbjct: 457 gagtac 462
>dbj|AK100090.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003J03, full insert sequence Length = 2409 Score = 147 bits (74), Expect = 3e-32 Identities = 158/186 (84%) Strand = Plus / Plus Query: 241 tggcacggcggctccgcctacgacgcctggttcagctgcgcttccaaccaggtggcccag 300 |||||||||||||||| || |||||||||||||||||||| || |||||||| || ||| Sbjct: 685 tggcacggcggctccgtctgggacgcctggttcagctgcgcctctaaccaggtcgcgcag 744 Query: 301 gtgctcctgaccttgccctactccttctcgcaactggggatggtgagcggcatactgttc 360 ||||||||||| |||| |||||||||||||| || |||||| | ||| | ||| | Sbjct: 745 gtgctcctgacgctgccgtactccttctcgcagctcgggatgctctcgggcgtgctgctg 804 Query: 361 cagctcttctacggcctcatggggagctggaccgcctacctcatcagcatcctctacgtg 420 ||||| |||||||| ||||||| ||||||||||||||||| |||||| |||||||||| Sbjct: 805 cagctgttctacggtttcatgggcagctggaccgcctacctaatcagcgtcctctacgtc 864 Query: 421 gagtac 426 |||||| Sbjct: 865 gagtac 870
>gb|AC135421.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0012G21, complete sequence Length = 135750 Score = 115 bits (58), Expect = 1e-22 Identities = 118/138 (85%) Strand = Plus / Minus Query: 289 caggtggcccaggtgctcctgaccttgccctactccttctcgcaactggggatggtgagc 348 |||||||| |||||||||||||| |||| |||||||||||||| || |||||| | Sbjct: 38539 caggtggcgcaggtgctcctgacgctgccgtactccttctcgcagctcgggatgctctcg 38480 Query: 349 ggcatactgttccagctcttctacggcctcatggggagctggaccgcctacctcatcagc 408 ||| | ||| | ||| | ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 38479 ggcctgctgctgcaggtgttctacggcctcatgggcagctggaccgcctacctcatcagc 38420 Query: 409 atcctctacgtggagtac 426 |||||||||| |||||| Sbjct: 38419 gtcctctacgtcgagtac 38402 Score = 89.7 bits (45), Expect = 7e-15 Identities = 57/61 (93%) Strand = Plus / Minus Query: 233 gcctcctgtggcacggcggctccgcctacgacgcctggttcagctgcgcttccaaccagg 292 |||||||||||||||||||||||| || |||||||||||||||||||| |||||||||| Sbjct: 38658 gcctcctgtggcacggcggctccgtctgggacgcctggttcagctgcgcctccaaccagg 38599 Query: 293 t 293 | Sbjct: 38598 t 38598
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 115 bits (58), Expect = 1e-22 Identities = 118/138 (85%) Strand = Plus / Minus Query: 289 caggtggcccaggtgctcctgaccttgccctactccttctcgcaactggggatggtgagc 348 |||||||| |||||||||||||| |||| |||||||||||||| || |||||| | Sbjct: 21786130 caggtggcgcaggtgctcctgacgctgccgtactccttctcgcagctcgggatgctctcg 21786071 Query: 349 ggcatactgttccagctcttctacggcctcatggggagctggaccgcctacctcatcagc 408 ||| | ||| | ||| | ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 21786070 ggcctgctgctgcaggtgttctacggcctcatgggcagctggaccgcctacctcatcagc 21786011 Query: 409 atcctctacgtggagtac 426 |||||||||| |||||| Sbjct: 21786010 gtcctctacgtcgagtac 21785993 Score = 89.7 bits (45), Expect = 7e-15 Identities = 57/61 (93%) Strand = Plus / Minus Query: 233 gcctcctgtggcacggcggctccgcctacgacgcctggttcagctgcgcttccaaccagg 292 |||||||||||||||||||||||| || |||||||||||||||||||| |||||||||| Sbjct: 21786249 gcctcctgtggcacggcggctccgtctgggacgcctggttcagctgcgcctccaaccagg 21786190 Query: 293 t 293 | Sbjct: 21786189 t 21786189
>dbj|AK111659.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151H06, full insert sequence Length = 2264 Score = 115 bits (58), Expect = 1e-22 Identities = 118/138 (85%) Strand = Plus / Plus Query: 289 caggtggcccaggtgctcctgaccttgccctactccttctcgcaactggggatggtgagc 348 |||||||| |||||||||||||| |||| |||||||||||||| || |||||| | Sbjct: 666 caggtggcgcaggtgctcctgacgctgccgtactccttctcgcagctcgggatgctctcg 725 Query: 349 ggcatactgttccagctcttctacggcctcatggggagctggaccgcctacctcatcagc 408 ||| | ||| | ||| | ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 726 ggcctgctgctgcaggtgttctacggcctcatgggcagctggaccgcctacctcatcagc 785 Query: 409 atcctctacgtggagtac 426 |||||||||| |||||| Sbjct: 786 gtcctctacgtcgagtac 803 Score = 89.7 bits (45), Expect = 7e-15 Identities = 57/61 (93%) Strand = Plus / Plus Query: 233 gcctcctgtggcacggcggctccgcctacgacgcctggttcagctgcgcttccaaccagg 292 |||||||||||||||||||||||| || |||||||||||||||||||| |||||||||| Sbjct: 547 gcctcctgtggcacggcggctccgtctgggacgcctggttcagctgcgcctccaaccagg 606 Query: 293 t 293 | Sbjct: 607 t 607
>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0073K23 map near R10571S, complete sequence Length = 161073 Score = 93.7 bits (47), Expect = 4e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 227 tctccggcctcctgtggcacggcggctccgcctacgacgcctggttcagctgcgcttcca 286 ||||| ||||| | |||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 89522 tctccagcctcttctggcacggcggctccgtctacgacgcctggttcagctgcgcctcca 89581 Query: 287 accaggt 293 ||||||| Sbjct: 89582 accaggt 89588 Score = 75.8 bits (38), Expect = 1e-10 Identities = 113/138 (81%) Strand = Plus / Plus Query: 289 caggtggcccaggtgctcctgaccttgccctactccttctcgcaactggggatggtgagc 348 |||||||| |||||||| ||||| ||||||||||||||||||| ||||| |||| | | Sbjct: 89675 caggtggcgcaggtgctgctgacgctgccctactccttctcgcagctgggcatggcgtcc 89734 Query: 349 ggcatactgttccagctcttctacggcctcatggggagctggaccgcctacctcatcagc 408 || | ||||||| | |||||||| || |||||| ||||| ||||||||||||||| Sbjct: 89735 ggggtggcgttccaggtgttctacgggctgatggggtcgtggacggcctacctcatcagc 89794 Query: 409 atcctctacgtggagtac 426 | |||||||| |||||| Sbjct: 89795 gtgctctacgtcgagtac 89812
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 93.7 bits (47), Expect = 4e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 227 tctccggcctcctgtggcacggcggctccgcctacgacgcctggttcagctgcgcttcca 286 ||||| ||||| | |||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 3324772 tctccagcctcttctggcacggcggctccgtctacgacgcctggttcagctgcgcctcca 3324713 Query: 287 accaggt 293 ||||||| Sbjct: 3324712 accaggt 3324706 Score = 75.8 bits (38), Expect = 1e-10 Identities = 113/138 (81%) Strand = Plus / Minus Query: 289 caggtggcccaggtgctcctgaccttgccctactccttctcgcaactggggatggtgagc 348 |||||||| |||||||| ||||| ||||||||||||||||||| ||||| |||| | | Sbjct: 3324619 caggtggcgcaggtgctgctgacgctgccctactccttctcgcagctgggcatggcgtcc 3324560 Query: 349 ggcatactgttccagctcttctacggcctcatggggagctggaccgcctacctcatcagc 408 || | ||||||| | |||||||| || |||||| ||||| ||||||||||||||| Sbjct: 3324559 ggggtggcgttccaggtgttctacgggctgatggggtcgtggacggcctacctcatcagc 3324500 Query: 409 atcctctacgtggagtac 426 | |||||||| |||||| Sbjct: 3324499 gtgctctacgtcgagtac 3324482
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 93.7 bits (47), Expect = 4e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 227 tctccggcctcctgtggcacggcggctccgcctacgacgcctggttcagctgcgcttcca 286 ||||| ||||| | |||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 3333477 tctccagcctcttctggcacggcggctccgtctacgacgcctggttcagctgcgcctcca 3333418 Query: 287 accaggt 293 ||||||| Sbjct: 3333417 accaggt 3333411 Score = 75.8 bits (38), Expect = 1e-10 Identities = 113/138 (81%) Strand = Plus / Minus Query: 289 caggtggcccaggtgctcctgaccttgccctactccttctcgcaactggggatggtgagc 348 |||||||| |||||||| ||||| ||||||||||||||||||| ||||| |||| | | Sbjct: 3333324 caggtggcgcaggtgctgctgacgctgccctactccttctcgcagctgggcatggcgtcc 3333265 Query: 349 ggcatactgttccagctcttctacggcctcatggggagctggaccgcctacctcatcagc 408 || | ||||||| | |||||||| || |||||| ||||| ||||||||||||||| Sbjct: 3333264 ggggtggcgttccaggtgttctacgggctgatggggtcgtggacggcctacctcatcagc 3333205 Query: 409 atcctctacgtggagtac 426 | |||||||| |||||| Sbjct: 3333204 gtgctctacgtcgagtac 3333187
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 91.7 bits (46), Expect = 2e-15 Identities = 115/138 (83%) Strand = Plus / Plus Query: 289 caggtggcccaggtgctcctgaccttgccctactccttctcgcaactggggatggtgagc 348 ||||| || |||||||||||||| |||| |||||||||||||| || |||||| | Sbjct: 36992606 caggtcgcgcaggtgctcctgacgctgccgtactccttctcgcagctcgggatgctctcg 36992665 Query: 349 ggcatactgttccagctcttctacggcctcatggggagctggaccgcctacctcatcagc 408 ||| | ||| | ||||| |||||||| ||||||| ||||||||||||||||| |||||| Sbjct: 36992666 ggcgtgctgctgcagctgttctacggtttcatgggcagctggaccgcctacctaatcagc 36992725 Query: 409 atcctctacgtggagtac 426 |||||||||| |||||| Sbjct: 36992726 gtcctctacgtcgagtac 36992743 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 241 tggcacggcggctccgcctacgacgcctggttcagctgcgcttccaaccaggt 293 |||||||||||||||| || |||||||||||||||||||| || |||||||| Sbjct: 36992426 tggcacggcggctccgtctgggacgcctggttcagctgcgcctctaaccaggt 36992478
>dbj|AP003415.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1402_H07 Length = 140620 Score = 91.7 bits (46), Expect = 2e-15 Identities = 115/138 (83%) Strand = Plus / Plus Query: 289 caggtggcccaggtgctcctgaccttgccctactccttctcgcaactggggatggtgagc 348 ||||| || |||||||||||||| |||| |||||||||||||| || |||||| | Sbjct: 82910 caggtcgcgcaggtgctcctgacgctgccgtactccttctcgcagctcgggatgctctcg 82969 Query: 349 ggcatactgttccagctcttctacggcctcatggggagctggaccgcctacctcatcagc 408 ||| | ||| | ||||| |||||||| ||||||| ||||||||||||||||| |||||| Sbjct: 82970 ggcgtgctgctgcagctgttctacggtttcatgggcagctggaccgcctacctaatcagc 83029 Query: 409 atcctctacgtggagtac 426 |||||||||| |||||| Sbjct: 83030 gtcctctacgtcgagtac 83047 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 241 tggcacggcggctccgcctacgacgcctggttcagctgcgcttccaaccaggt 293 |||||||||||||||| || |||||||||||||||||||| || |||||||| Sbjct: 82730 tggcacggcggctccgtctgggacgcctggttcagctgcgcctctaaccaggt 82782
>gb|AF522029.1| Momordica charantia auxin influx carrier-like protein 2 (AIC2) mRNA, complete cds Length = 2787 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 234 cctcctgtggcacggcggctccgcctacgacgcctggttcagctgcgcttccaaccaggt 293 |||||| ||||||||||||||||||| |||||||||||||||||||| ||||| || || Sbjct: 766 cctcctctggcacggcggctccgcctgggacgcctggttcagctgcgcctccaatcaagt 825 Query: 294 ggcccaggtgct 305 ||| |||||||| Sbjct: 826 ggctcaggtgct 837
>gb|AY109327.1| Zea mays CL468_1 mRNA sequence Length = 2907 Score = 79.8 bits (40), Expect = 7e-12 Identities = 58/64 (90%) Strand = Plus / Plus Query: 233 gcctcctgtggcacggcggctccgcctacgacgcctggttcagctgcgcttccaaccagg 292 |||| ||||||||||||||||||| || ||||| |||||||||||||| |||||||||| Sbjct: 889 gcctgctgtggcacggcggctccgtctgggacgcgtggttcagctgcgcctccaaccagg 948 Query: 293 tggc 296 |||| Sbjct: 949 tggc 952 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 385 agctggaccgcctacctcatcagcatcctctacgtggagtac 426 ||||||||||| |||||||||||| |||||||||| |||||| Sbjct: 1041 agctggaccgcgtacctcatcagcgtcctctacgtcgagtac 1082
>gb|AF522030.1| Momordica charantia auxin influx carrier-like protein 3 (AIC3) mRNA, complete cds Length = 2025 Score = 60.0 bits (30), Expect = 6e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 265 gcctggttcagctgcgcttccaaccaggtggcccaggtgctcctgaccttgccctactcc 324 ||||||||||||||||| || || ||||| ||||| || || || || |||||||||| Sbjct: 583 gcctggttcagctgcgcctcaaatcaggttgcccaagttctgcttactctgccctactct 642 Query: 325 ttctcgcaactggggatg 342 ||||| |||||||||||| Sbjct: 643 ttctctcaactggggatg 660
>gb|AF522028.1| Momordica charantia auxin influx carrier-like protein 1 (AIC1) mRNA, complete cds Length = 1866 Score = 60.0 bits (30), Expect = 6e-06 Identities = 66/78 (84%) Strand = Plus / Plus Query: 265 gcctggttcagctgcgcttccaaccaggtggcccaggtgctcctgaccttgccctactcc 324 ||||||||||||||||| || || ||||| ||||| || || || || |||||||||| Sbjct: 253 gcctggttcagctgcgcctcaaatcaggttgcccaagttctgcttactctgccctactct 312 Query: 325 ttctcgcaactggggatg 342 ||||| |||||||||||| Sbjct: 313 ttctctcaactggggatg 330
>ref|NM_127675.2| Arabidopsis thaliana amino acid permease/ transporter AT2G21050 mRNA, complete cds Length = 1848 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 268 tggttcagctgcgcttccaaccaggtggcccaggtgctcctgaccttgccctactccttc 327 ||||||||||| |||||||| |||||||| || ||||| |||| |||| ||||| ||| Sbjct: 335 tggttcagctgtgcttccaatcaggtggcacaagtgctgttgacactgccatactcgttc 394 Query: 328 tcgcaactggggatg 342 || || ||||||||| Sbjct: 395 tcacagctggggatg 409
>gb|AY128714.1| Arabidopsis thaliana AUX1-like amino acid permease (At2g21050) mRNA, complete cds Length = 1541 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 268 tggttcagctgcgcttccaaccaggtggcccaggtgctcctgaccttgccctactccttc 327 ||||||||||| |||||||| |||||||| || ||||| |||| |||| ||||| ||| Sbjct: 136 tggttcagctgtgcttccaatcaggtggcacaagtgctgttgacactgccatactcgttc 195 Query: 328 tcgcaactggggatg 342 || || ||||||||| Sbjct: 196 tcacagctggggatg 210
>gb|AY054684.1| Arabidopsis thaliana AUX1-like amino acid permease (At2g21050; F26H11.19) mRNA, complete cds Length = 1724 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 268 tggttcagctgcgcttccaaccaggtggcccaggtgctcctgaccttgccctactccttc 327 ||||||||||| |||||||| |||||||| || ||||| |||| |||| ||||| ||| Sbjct: 170 tggttcagctgtgcttccaatcaggtggcacaagtgctgttgacactgccatactcgttc 229 Query: 328 tcgcaactggggatg 342 || || ||||||||| Sbjct: 230 tcacagctggggatg 244
>emb|BX819654.1|CNS0AA21 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS11ZG12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1827 Score = 54.0 bits (27), Expect = 4e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 268 tggttcagctgcgcttccaaccaggtggcccaggtgctcctgaccttgccctactccttc 327 ||||||||||| |||||||| |||||||| || ||||| |||| |||| ||||| ||| Sbjct: 152 tggttcagctgtgcttccaatcaggtggcacaagtgctgttgacactgccatactcgttc 211 Query: 328 tcgcaactggggatg 342 || || ||||||||| Sbjct: 212 tcacagctggggatg 226
>emb|AM235386.1| Dianthus caryophyllus mRNA for auxin influx carrier (aux1 gene) Length = 1521 Score = 50.1 bits (25), Expect = 0.006 Identities = 109/137 (79%) Strand = Plus / Plus Query: 268 tggttcagctgcgcttccaaccaggtggcccaggtgctcctgaccttgccctactccttc 327 |||||||| ||| |||| ||||| ||||| || ||| | || || ||||| ||||| ||| Sbjct: 174 tggttcagttgctcttctaaccaagtggcgcaagtgttgctaactttgccgtactcgttc 233 Query: 328 tcgcaactggggatggtgagcggcatactgttccagctcttctacggcctcatggggagc 387 |||||| |||||||| | ||| ||| | | ||| | ||||||||| | |||||||| Sbjct: 234 tcgcaattggggatgttatccggaatagtactgcagatattctacggctttttggggagc 293 Query: 388 tggaccgcctacctcat 404 |||||||| |||||||| Sbjct: 294 tggaccgcgtacctcat 310
>gb|AY553235.1| Leptosphaeria maculans HDX1 (HDX1), PKS1 (PKS1), and UVI-1h (UVI-1h) genes, complete cds; sirodesmin biosynthetic gene cluster, complete sequence; MP1 (MP1), and ZnF3 (ZnF3) genes, complete cds Length = 68683 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Minus Query: 130 gatggcctcgccgacgagaaggc 152 ||||||||||||||||||||||| Sbjct: 51175 gatggcctcgccgacgagaaggc 51153
>gb|AY437642.2| Leptosphaeria maculans ATP binding cassette transporter (ABCt4) and hypothetical protein genes, complete cds Length = 7312 Score = 46.1 bits (23), Expect = 0.093 Identities = 23/23 (100%) Strand = Plus / Minus Query: 130 gatggcctcgccgacgagaaggc 152 ||||||||||||||||||||||| Sbjct: 1619 gatggcctcgccgacgagaaggc 1597
>ref|NM_129368.2| Arabidopsis thaliana AUX1 (AUXIN RESISTANT 1); amino acid permease/ transporter AT2G38120 (AUX1) mRNA, complete cds Length = 2135 Score = 42.1 bits (21), Expect = 1.5 Identities = 51/61 (83%) Strand = Plus / Plus Query: 236 tcctgtggcacggcggctccgcctacgacgcctggttcagctgcgcttccaaccaggtgg 295 |||| |||||||| ||||| | || ||||| |||||||||||||| || ||||| |||| Sbjct: 411 tcctatggcacggtggctctgtctgggacgcttggttcagctgcgcatctaaccaagtgg 470 Query: 296 c 296 | Sbjct: 471 c 471
>gb|AY093300.1| Arabidopsis thaliana unknown protein (At2g38120) mRNA, complete cds Length = 1638 Score = 42.1 bits (21), Expect = 1.5 Identities = 51/61 (83%) Strand = Plus / Plus Query: 236 tcctgtggcacggcggctccgcctacgacgcctggttcagctgcgcttccaaccaggtgg 295 |||| |||||||| ||||| | || ||||| |||||||||||||| || ||||| |||| Sbjct: 122 tcctatggcacggtggctctgtctgggacgcttggttcagctgcgcatctaaccaagtgg 181 Query: 296 c 296 | Sbjct: 182 c 182
>gb|AY054488.1| Arabidopsis thaliana Unknown protein (At2g38120; F16M14.5) mRNA, complete cds Length = 2068 Score = 42.1 bits (21), Expect = 1.5 Identities = 51/61 (83%) Strand = Plus / Plus Query: 236 tcctgtggcacggcggctccgcctacgacgcctggttcagctgcgcttccaaccaggtgg 295 |||| |||||||| ||||| | || ||||| |||||||||||||| || ||||| |||| Sbjct: 411 tcctatggcacggtggctctgtctgggacgcttggttcagctgcgcatctaaccaagtgg 470 Query: 296 c 296 | Sbjct: 471 c 471
>gb|AY087092.1| Arabidopsis thaliana clone 31586 mRNA, complete sequence Length = 2047 Score = 42.1 bits (21), Expect = 1.5 Identities = 51/61 (83%) Strand = Plus / Plus Query: 236 tcctgtggcacggcggctccgcctacgacgcctggttcagctgcgcttccaaccaggtgg 295 |||| |||||||| ||||| | || ||||| |||||||||||||| || ||||| |||| Sbjct: 406 tcctatggcacggtggctctgtctgggacgcttggttcagctgcgcatctaaccaagtgg 465 Query: 296 c 296 | Sbjct: 466 c 466
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 gagtgaccatggccgcagca 123 |||||||||||||||||||| Sbjct: 5128973 gagtgaccatggccgcagca 5128992
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 292 gtggcccaggtgctcctgaccttg 315 |||||||||||||| ||||||||| Sbjct: 4482949 gtggcccaggtgctgctgaccttg 4482972
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 308 tgaccttgccctactccttc 327 |||||||||||||||||||| Sbjct: 2990748 tgaccttgccctactccttc 2990767
>emb|AL162633.3|CNS01RHY Human chromosome 14 DNA sequence BAC R-210O8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 164550 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 aggagatggagcaagacggc 201 |||||||||||||||||||| Sbjct: 23723 aggagatggagcaagacggc 23742
>dbj|AB085896.1| Cucumis sativus CS-AUX1 mRNA for AUX1-like auxin transport protein, complete cds Length = 2121 Score = 40.1 bits (20), Expect = 5.7 Identities = 59/72 (81%) Strand = Plus / Plus Query: 234 cctcctgtggcacggcggctccgcctacgacgcctggttcagctgcgcttccaaccaggt 293 |||||| |||||||||||||| || | || || ||||| || || ||||| ||||| || Sbjct: 460 cctcctctggcacggcggctctgcttgggatgcttggtttagttgtgcttcaaaccaagt 519 Query: 294 ggcccaggtgct 305 ||| |||||||| Sbjct: 520 ggctcaggtgct 531
>emb|AL359234.4|CNS05TEL Human chromosome 14 DNA sequence BAC C-2184N20 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 115087 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 aggagatggagcaagacggc 201 |||||||||||||||||||| Sbjct: 10137 aggagatggagcaagacggc 10118 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,565,163 Number of Sequences: 3902068 Number of extensions: 2565163 Number of successful extensions: 46421 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 46 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 46108 Number of HSP's gapped (non-prelim): 309 length of query: 427 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 405 effective length of database: 17,147,199,772 effective search space: 6944615907660 effective search space used: 6944615907660 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
