Clone Name	bart52g06
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|BT009308.1| Triticum aestivum clone wlm1.pk0019.c10:fis, full...	763	0.0
2	gb|M95819.1|WHTIF4F28B Wheat (clone p28-62) initiation factor is...	759	0.0
3	gb|M95818.1|WHTIF4F28A Wheat (clone p28-1) initiation factor iso...	735	0.0
4	ref|NM_196932.1| Oryza sativa (japonica cultivar-group) cap-bind...	363	3e-97
5	gb|U34598.1|OSU34598 Oryza sativa cap-binding protein p28 mRNA, ...	355	8e-95
6	gb|AF076955.1|AF076955 Zea mays eukaryotic translation initiatio...	252	9e-64
7	gb|AY109572.1| Zea mays CL1008_1 mRNA sequence	230	3e-57
8	gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06 geno...	192	7e-46
9	dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...	192	7e-46
10	gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...	192	7e-46
11	gb|AY423377.1| Pisum sativum cultivar JI2009 eukaryotic translat...	98	3e-17
12	gb|AF530163.1| Lactuca sativa eukaryotic translation initiation ...	86	1e-13
13	gb|DQ022082.1| Capsicum annuum cultivar Florida VR2 eukaryotic i...	74	4e-10
14	gb|DQ022081.1| Capsicum annuum cultivar Yolo Y eukaryotic initia...	74	4e-10
15	gb|DQ022080.1| Capsicum annuum cultivar Yolo Wonder eukaryotic i...	74	4e-10
16	gb|DQ022084.1| Capsicum annuum cultivar DH801 eukaryotic initiat...	66	1e-07
17	gb|DQ022083.1| Capsicum annuum cultivar Perennial eukaryotic ini...	66	1e-07
18	ref|NM_122953.1| Arabidopsis thaliana LSP1 (LOSS OF SUSCEPTIBILI...	54	4e-04
19	ref|NM_203123.1| Arabidopsis thaliana LSP1 (LOSS OF SUSCEPTIBILI...	54	4e-04
20	emb|Y10547.1|ATEIF4EIS A.thaliana mRNA for eIF4Eiso protein	54	4e-04
21	gb|AF538308.1| Arabidopsis thaliana cap binding protein eIF(iso)...	54	4e-04
22	gb|AY081514.1| Arabidopsis thaliana eIF4Eiso protein (At5g35620)...	54	4e-04
23	gb|AY054630.1| Arabidopsis thaliana eIF4Eiso protein (At5g35620;...	54	4e-04
24	emb|BX831945.1|CNS0A12Q Arabidopsis thaliana Full-length cDNA Co...	54	4e-04
25	gb|AY086315.1| Arabidopsis thaliana clone 23770 mRNA, complete s...	54	4e-04
26	dbj|AB013393.2| Arabidopsis thaliana genomic DNA, chromosome 5, ...	54	4e-04
27	gb|U62044.1|ATU62044 Arabidopsis thaliana eukaryotic initiation ...	54	4e-04
28	gb|BT014561.1| Lycopersicon esculentum clone 134015R, mRNA sequence	50	0.006
29	gb|AY699609.1| Nicotiana tabacum eukaryotic initiation factor is...	46	0.10
30	emb|CR339049.6| Zebrafish DNA sequence from clone CH211-165D12 i...	44	0.40
31	gb|AC126802.4| Mus musculus BAC clone RP24-543J12 from chromosom...	42	1.6
32	emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genom...	42	1.6
33	gb|AC023992.8| Homo sapiens chromosome 17, clone RP11-247I5, com...	42	1.6
34	gb|AC004687.1|AC004687 Homo sapiens chromosome 17, clone hRPC.11...	42	1.6
35	ref|XM_545328.2| PREDICTED: Canis familiaris similar to ras resp...	40	6.2
36	gb|AC102566.9| Mus musculus chromosome 9, clone RP23-223D10, com...	40	6.2
37	emb|Z93942.1|HS230I19 Human DNA sequence from clone RP1-230I19 o...	40	6.2
38	emb|AL137848.5| Human DNA sequence from clone RP11-77D6 on chrom...	40	6.2
39	emb|CR450776.4| Zebrafish DNA sequence from clone DKEY-48J7 in l...	40	6.2
40	gb|AC012146.25| Homo sapiens chromosome 17, clone RP11-46I8, com...	40	6.2
41	dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...	40	6.2
42	dbj|AP005642.3| Oryza sativa (japonica cultivar-group) genomic D...	40	6.2

---

>gb|BT009308.1| Triticum aestivum clone wlm1.pk0019.c10:fis, full insert mRNA
           sequence
          Length = 1162

 Score =  763 bits (385), Expect = 0.0
 Identities = 441/459 (96%), Gaps = 3/459 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   cggctcatcctccccatcccaaaaccctcggaaagcaaaggcggcggcgcgacatggcag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9   cggctcatcctccccatcccaaaaccctcggaaagcaaaggcggcggcgcgacatggcag 68

                                                                       
Query: 61  aggtcgaagccgcgctcccggtggcagcaacgacagaaaccccggatgtcgcggccgaga 120
           |||||||||| |||||||||||||| ||   |||||| |||||||| |||||||||||||
Sbjct: 69  aggtcgaagctgcgctcccggtggcggc---gacagagaccccggaggtcgcggccgaga 125

                                                                       
Query: 121 gcgacgcgggcgcggccgacgcgaaggcgccgcacaagctgcagcggcagtggaccttct 180
           ||||||| || |||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 126 gcgacgccggtgcggccgaggcgaaggggccgcacaagctgcagcggcagtggaccttct 185

                                                                       
Query: 181 ggtacgacatccagtccaagcccaagcccggcgccgcctggggcacctcgctcaaaaagg 240
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ggtacgacatccagaccaagcccaagcccggcgccgcctggggcacctcgctcaaaaagg 245

                                                                       
Query: 241 gctacaccttcgacaccgtcgaagagttctggtgtttatatgatcagattttccgtccga 300
           |||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 246 gctacaccttcgacaccgtcgaagagttctggtgcttgtatgatcagattttccgtccga 305

                                                                       
Query: 301 gtaagttggtaggaagtgctgattttcatttattcaaggctggggtagaaccaaagtggg 360
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gtaagctggtaggaagtgctgattttcatttattcaaggctggggtagaaccaaagtggg 365

                                                                       
Query: 361 aagatccagagtgcgcaaatgggggcaaatggactgtgatatctagcaggaaggccaacc 420
           ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 366 aagatccagagtgtgcaaatgggggcaaatggactgtgatatctagcaggaaggccaatc 425

                                                  
Query: 421 ttgataccatgtggcttgaaacgtgcatggctctgattg 459
           ||||||||||||||||||||||||| |||||||||||||
Sbjct: 426 ttgataccatgtggcttgaaacgtgtatggctctgattg 464

---

>gb|M95819.1|WHTIF4F28B Wheat (clone p28-62) initiation factor isozyme 4F p28 subunit mRNA,
           complete cds
          Length = 1054

 Score =  759 bits (383), Expect = 0.0
 Identities = 439/457 (96%), Gaps = 3/457 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   gctcatcctccccatcccaaaaccctcggaaagcaaaggcggcggcgcgacatggcagag 62
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14  gctcatcctccccatcccaaaaccctcggaaagcaaaggcggcggcgcgacatggcagag 73

                                                                       
Query: 63  gtcgaagccgcgctcccggtggcagcaacgacagaaaccccggatgtcgcggccgagagc 122
           |||||||| |||||||||||||| ||   |||||| |||||||| |||||||||||||||
Sbjct: 74  gtcgaagctgcgctcccggtggcggc---gacagagaccccggaggtcgcggccgagagc 130

                                                                       
Query: 123 gacgcgggcgcggccgacgcgaaggcgccgcacaagctgcagcggcagtggaccttctgg 182
           ||||| || |||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 131 gacgccggtgcggccgaggcgaaggggccgcacaagctgcagcggcagtggaccttctgg 190

                                                                       
Query: 183 tacgacatccagtccaagcccaagcccggcgccgcctggggcacctcgctcaaaaagggc 242
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tacgacatccagaccaagcccaagcccggcgccgcctggggcacctcgctcaaaaagggc 250

                                                                       
Query: 243 tacaccttcgacaccgtcgaagagttctggtgtttatatgatcagattttccgtccgagt 302
           |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 251 tacaccttcgacaccgtcgaagagttctggtgcttgtatgatcagattttccgtccgagt 310

                                                                       
Query: 303 aagttggtaggaagtgctgattttcatttattcaaggctggggtagaaccaaagtgggaa 362
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 aagctggtaggaagtgctgattttcatttattcaaggctggggtagaaccaaagtgggaa 370

                                                                       
Query: 363 gatccagagtgcgcaaatgggggcaaatggactgtgatatctagcaggaaggccaacctt 422
           ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 371 gatccagagtgtgcaaatgggggcaaatggactgtgatatctagcaggaaggccaatctt 430

                                                
Query: 423 gataccatgtggcttgaaacgtgcatggctctgattg 459
           ||||||||||||||||||||||| |||||||||||||
Sbjct: 431 gataccatgtggcttgaaacgtgtatggctctgattg 467

---

>gb|M95818.1|WHTIF4F28A Wheat (clone p28-1) initiation factor isozyme 4F p82 subunit mRNA,
           complete cds
          Length = 1079

 Score =  735 bits (371), Expect = 0.0
 Identities = 436/457 (95%), Gaps = 3/457 (0%)
 Strand = Plus / Plus

                                                                       
Query: 3   gctcatcctccccatcccaaaaccctcggaaagcaaaggcggcggcgcgacatggcagag 62
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 14  gctcatcctccccatcccaaaaccctcgaaaagcaaaggcggcggcgcgacatggcagag 73

                                                                       
Query: 63  gtcgaagccgcgctcccggtggcagcaacgacagaaaccccggatgtcgcggccgagagc 122
           |||||||| |||||||||||||| ||   |||||| |||||||| ||||| |||||| ||
Sbjct: 74  gtcgaagctgcgctcccggtggcggc---gacagagaccccggaggtcgccgccgagggc 130

                                                                       
Query: 123 gacgcgggcgcggccgacgcgaaggcgccgcacaagctgcagcggcagtggaccttctgg 182
           |||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 131 gacgcgggtgcggccgaggcgaaggggccgcacaagctgcagcggcagtggaccttctgg 190

                                                                       
Query: 183 tacgacatccagtccaagcccaagcccggcgccgcctggggcacctcgctcaaaaagggc 242
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tacgacatccagaccaagcccaagcccggcgccgcctggggcacctcgctcaaaaagggc 250

                                                                       
Query: 243 tacaccttcgacaccgtcgaagagttctggtgtttatatgatcagattttccgtccgagt 302
           |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct: 251 tacaccttcgacaccgtcgaagagttctggtgcttgtatgatcagattttccgtccgagt 310

                                                                       
Query: 303 aagttggtaggaagtgctgattttcatttattcaaggctggggtagaaccaaagtgggaa 362
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 aagctggtaggaagtgctgattttcatttattcaaggctggggtagaaccaaagtgggaa 370

                                                                       
Query: 363 gatccagagtgcgcaaatgggggcaaatggactgtgatatctagcaggaaggccaacctt 422
           |||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||
Sbjct: 371 gatccagagtgcgcaaatggaggcaaatggactgtgatatctagcaggaagaccaatctt 430

                                                
Query: 423 gataccatgtggcttgaaacgtgcatggctctgattg 459
           ||||||||||||||||||||||| |||||||||||||
Sbjct: 431 gataccatgtggcttgaaacgtgtatggctctgattg 467

---

>ref|NM_196932.1| Oryza sativa (japonica cultivar-group) cap-binding protein p28
           (OSJNBa0006L06.9), mRNA
          Length = 993

 Score =  363 bits (183), Expect = 3e-97
 Identities = 285/319 (89%)
 Strand = Plus / Plus

                                                                       
Query: 141 gcgaaggcgccgcacaagctgcagcggcagtggaccttctggtacgacatccagtccaag 200
           |||||||||||||||||||||||  |||||||| | ||||||||||||||||||||||||
Sbjct: 206 gcgaaggcgccgcacaagctgcataggcagtgggcgttctggtacgacatccagtccaag 265

                                                                       
Query: 201 cccaagcccggcgccgcctggggcacctcgctcaaaaagggctacaccttcgacaccgtc 260
           ||||||||||||||||| ||||| |||||||||   |||| |||||||||||||||||||
Sbjct: 266 cccaagcccggcgccgcgtgggggacctcgctccgcaaggcctacaccttcgacaccgtc 325

                                                                       
Query: 261 gaagagttctggtgtttatatgatcagattttccgtccgagtaagttggtaggaagtgct 320
           || ||||||||| | || |||||||||||||||||||| || ||| ||  || || ||||
Sbjct: 326 gaggagttctggggcttgtatgatcagattttccgtccaagcaaggtgacagtaaatgct 385

                                                                       
Query: 321 gattttcatttattcaaggctggggtagaaccaaagtgggaagatccagagtgcgcaaat 380
           ||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 386 gattttcatttattcaaggctggtgtagaaccaaagtgggaagacccagagtgtgcaaat 445

                                                                       
Query: 381 gggggcaaatggactgtgatatctagcaggaaggccaaccttgataccatgtggcttgaa 440
           ||||||||||||||||||  || |||||||||| ||| |||||| | |||||||||||||
Sbjct: 446 gggggcaaatggactgtgccatgtagcaggaagaccacccttgagaacatgtggcttgaa 505

                              
Query: 441 acgtgcatggctctgattg 459
           |||   |||||||||||||
Sbjct: 506 acgctgatggctctgattg 524

---

>gb|U34598.1|OSU34598 Oryza sativa cap-binding protein p28 mRNA, complete cds
          Length = 1010

 Score =  355 bits (179), Expect = 8e-95
 Identities = 284/319 (89%)
 Strand = Plus / Plus

                                                                       
Query: 141 gcgaaggcgccgcacaagctgcagcggcagtggaccttctggtacgacatccagtccaag 200
           |||||||||||||||||||||||  |||||||| | ||||||||||||||||||||||||
Sbjct: 223 gcgaaggcgccgcacaagctgcataggcagtgggcgttctggtacgacatccagtccaag 282

                                                                       
Query: 201 cccaagcccggcgccgcctggggcacctcgctcaaaaagggctacaccttcgacaccgtc 260
           ||||||||||||||||| ||||| |||||||||   |||| |||||||||||||||||||
Sbjct: 283 cccaagcccggcgccgcgtgggggacctcgctccgcaaggcctacaccttcgacaccgtc 342

                                                                       
Query: 261 gaagagttctggtgtttatatgatcagattttccgtccgagtaagttggtaggaagtgct 320
           || ||||||||| | || |||||||||||||||||||| || ||| ||  || || ||||
Sbjct: 343 gaggagttctggggcttgtatgatcagattttccgtccaagcaaggtgacagtaaatgct 402

                                                                       
Query: 321 gattttcatttattcaaggctggggtagaaccaaagtgggaagatccagagtgcgcaaat 380
           ||||||||||||||||||| ||| |||||||||||||||||||| |||||||| ||||||
Sbjct: 403 gattttcatttattcaaggttggtgtagaaccaaagtgggaagacccagagtgtgcaaat 462

                                                                       
Query: 381 gggggcaaatggactgtgatatctagcaggaaggccaaccttgataccatgtggcttgaa 440
           ||||||||||||||||||  || |||||||||| ||| |||||| | |||||||||||||
Sbjct: 463 gggggcaaatggactgtgccatgtagcaggaagaccacccttgagaacatgtggcttgaa 522

                              
Query: 441 acgtgcatggctctgattg 459
           |||   |||||||||||||
Sbjct: 523 acgctgatggctctgattg 541

---

>gb|AF076955.1|AF076955 Zea mays eukaryotic translation initiation factor p28 subunit
           (eIFiso-4E) mRNA, complete cds
          Length = 1166

 Score =  252 bits (127), Expect = 9e-64
 Identities = 271/319 (84%)
 Strand = Plus / Plus

                                                                       
Query: 141 gcgaaggcgccgcacaagctgcagcggcagtggaccttctggtacgacatccagtccaag 200
           |||||||  ||||||||||| || |||||||||||||||||||||||||||||| | |||
Sbjct: 255 gcgaagggtccgcacaagcttcaccggcagtggaccttctggtacgacatccagacgaag 314

                                                                       
Query: 201 cccaagcccggcgccgcctggggcacctcgctcaaaaagggctacaccttcgacaccgtc 260
            ||||| |||| || || ||||||||||| |||||||||| |||||||||||||||||| 
Sbjct: 315 accaagtccggggctgcgtggggcacctccctcaaaaaggcctacaccttcgacaccgtt 374

                                                                       
Query: 261 gaagagttctggtgtttatatgatcagattttccgtccgagtaagttggtaggaagtgct 320
           || ||||||||| |  | |||||||||||||| ||||| || ||||||   || | ||||
Sbjct: 375 gaggagttctggagcatgtatgatcagatttttcgtccaagcaagttgtctgggaatgct 434

                                                                       
Query: 321 gattttcatttattcaaggctggggtagaaccaaagtgggaagatccagagtgcgcaaat 380
           ||||||||| ||||||||||||| ||||| ||||| |||||||| |||||||| ||||||
Sbjct: 435 gattttcatctattcaaggctggagtagagccaaaatgggaagacccagagtgtgcaaat 494

                                                                       
Query: 381 gggggcaaatggactgtgatatctagcaggaaggccaaccttgataccatgtggcttgaa 440
           || ||||||||||||||   ||  | ||| ||||| | | |||| |||||||||||||||
Sbjct: 495 ggtggcaaatggactgtcccatgcaacagaaaggcaacctttgagaccatgtggcttgaa 554

                              
Query: 441 acgtgcatggctctgattg 459
           ||||  |||||||| ||||
Sbjct: 555 acgttgatggctcttattg 573

---

>gb|AY109572.1| Zea mays CL1008_1 mRNA sequence
          Length = 1955

 Score =  230 bits (116), Expect = 3e-57
 Identities = 266/315 (84%), Gaps = 2/315 (0%)
 Strand = Plus / Plus

                                                                       
Query: 141 gcgaaggcgccgcacaagctgcagcggcagtggaccttctggtacgacatccagtccaag 200
           |||||||  |||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 301 gcgaagggtccgcacaagctgcaccgccagtggaccttctggtacgacatccagtccaag 360

                                                                       
Query: 201 cccaagcccggcgccgcctggggcacctcgctcaaaaagggctacaccttcgacaccgtc 260
           ||||| |||||||| || ||||||||||| |||     ||  ||||||||||||||||||
Sbjct: 361 cccaaacccggcgctgcgtggggcacctccctcnnnnnggcgtacaccttcgacaccgtc 420

                                                                       
Query: 261 gaagagttctggtgtttatatgatcagattttccgtccgagtaagttggtaggaagtgct 320
           || ||||| ||| | || ||||||||  |||||||||| || ||||||   || | ||||
Sbjct: 421 gaggagttttggggcttgtatgatcatgttttccgtccaagcaagttgcctgggactgct 480

                                                                       
Query: 321 gattttcatttattcaaggctggggtagaaccaaagtgggaagatccagagtgcgcaaat 380
           ||||||||  ||||||||||||| ||||| ||||| |||||||| |||||||| ||||||
Sbjct: 481 gattttcacctattcaaggctggagtagagccaaaatgggaagacccagagtgtgcaaat 540

                                                                       
Query: 381 gggggcaaatggactgtgatatctagcaggaaggccaacc-ttgataccatgtggcttga 439
           || ||||||||||||||   ||  | || ||| ||||||| |||| ||||||||||||||
Sbjct: 541 ggtggcaaatggactgtcccatgcaaca-gaaagccaacctttgagaccatgtggcttga 599

                          
Query: 440 aacgtgcatggctct 454
           |||||  ||||||||
Sbjct: 600 aacgttgatggctct 614



 Score = 48.1 bits (24), Expect = 0.025
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 40  ggcggcggcgcgacatggcagaggtcga 67
           ||||||||||||||||||| ||||||||
Sbjct: 200 ggcggcggcgcgacatggcggaggtcga 227

---

>gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06 genomic sequence, complete
             sequence
          Length = 162339

 Score =  192 bits (97), Expect = 7e-46
 Identities = 148/165 (89%)
 Strand = Plus / Plus

                                                                         
Query: 279   tatgatcagattttccgtccgagtaagttggtaggaagtgctgattttcatttattcaag 338
             |||||||||||||||||||| || ||| ||  || || ||||||||||||||||||||||
Sbjct: 89057 tatgatcagattttccgtccaagcaaggtgacagtaaatgctgattttcatttattcaag 89116

                                                                         
Query: 339   gctggggtagaaccaaagtgggaagatccagagtgcgcaaatgggggcaaatggactgtg 398
             ||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 89117 gctggtgtagaaccaaagtgggaagacccagagtgtgcaaatgggggcaaatggactgtg 89176

                                                          
Query: 399   atatctagcaggaaggccaaccttgataccatgtggcttgaaacg 443
               || |||||||||| ||| |||||| | ||||||||||||||||
Sbjct: 89177 ccatgtagcaggaagaccacccttgagaacatgtggcttgaaacg 89221



 Score =  174 bits (88), Expect = 2e-40
 Identities = 121/132 (91%)
 Strand = Plus / Plus

                                                                         
Query: 141   gcgaaggcgccgcacaagctgcagcggcagtggaccttctggtacgacatccagtccaag 200
             |||||||||||||||||||||||  |||||||| | ||||||||||||||||||||||||
Sbjct: 87950 gcgaaggcgccgcacaagctgcataggcagtgggcgttctggtacgacatccagtccaag 88009

                                                                         
Query: 201   cccaagcccggcgccgcctggggcacctcgctcaaaaagggctacaccttcgacaccgtc 260
             ||||||||||||||||| ||||| |||||||||   |||| |||||||||||||||||||
Sbjct: 88010 cccaagcccggcgccgcgtgggggacctcgctccgcaaggcctacaccttcgacaccgtc 88069

                         
Query: 261   gaagagttctgg 272
             || |||||||||
Sbjct: 88070 gaggagttctgg 88081

---

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  192 bits (97), Expect = 7e-46
 Identities = 148/165 (89%)
 Strand = Plus / Plus

                                                                            
Query: 279      tatgatcagattttccgtccgagtaagttggtaggaagtgctgattttcatttattcaag 338
                |||||||||||||||||||| || ||| ||  || || ||||||||||||||||||||||
Sbjct: 16744540 tatgatcagattttccgtccaagcaaggtgacagtaaatgctgattttcatttattcaag 16744599

                                                                            
Query: 339      gctggggtagaaccaaagtgggaagatccagagtgcgcaaatgggggcaaatggactgtg 398
                ||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 16744600 gctggtgtagaaccaaagtgggaagacccagagtgtgcaaatgggggcaaatggactgtg 16744659

                                                             
Query: 399      atatctagcaggaaggccaaccttgataccatgtggcttgaaacg 443
                  || |||||||||| ||| |||||| | ||||||||||||||||
Sbjct: 16744660 ccatgtagcaggaagaccacccttgagaacatgtggcttgaaacg 16744704



 Score =  174 bits (88), Expect = 2e-40
 Identities = 121/132 (91%)
 Strand = Plus / Plus

                                                                            
Query: 141      gcgaaggcgccgcacaagctgcagcggcagtggaccttctggtacgacatccagtccaag 200
                |||||||||||||||||||||||  |||||||| | ||||||||||||||||||||||||
Sbjct: 16743433 gcgaaggcgccgcacaagctgcataggcagtgggcgttctggtacgacatccagtccaag 16743492

                                                                            
Query: 201      cccaagcccggcgccgcctggggcacctcgctcaaaaagggctacaccttcgacaccgtc 260
                ||||||||||||||||| ||||| |||||||||   |||| |||||||||||||||||||
Sbjct: 16743493 cccaagcccggcgccgcgtgggggacctcgctccgcaaggcctacaccttcgacaccgtc 16743552

                            
Query: 261      gaagagttctgg 272
                || |||||||||
Sbjct: 16743553 gaggagttctgg 16743564

---

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  192 bits (97), Expect = 7e-46
 Identities = 148/165 (89%)
 Strand = Plus / Plus

                                                                            
Query: 279      tatgatcagattttccgtccgagtaagttggtaggaagtgctgattttcatttattcaag 338
                |||||||||||||||||||| || ||| ||  || || ||||||||||||||||||||||
Sbjct: 16753580 tatgatcagattttccgtccaagcaaggtgacagtaaatgctgattttcatttattcaag 16753639

                                                                            
Query: 339      gctggggtagaaccaaagtgggaagatccagagtgcgcaaatgggggcaaatggactgtg 398
                ||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 16753640 gctggtgtagaaccaaagtgggaagacccagagtgtgcaaatgggggcaaatggactgtg 16753699

                                                             
Query: 399      atatctagcaggaaggccaaccttgataccatgtggcttgaaacg 443
                  || |||||||||| ||| |||||| | ||||||||||||||||
Sbjct: 16753700 ccatgtagcaggaagaccacccttgagaacatgtggcttgaaacg 16753744



 Score =  174 bits (88), Expect = 2e-40
 Identities = 121/132 (91%)
 Strand = Plus / Plus

                                                                            
Query: 141      gcgaaggcgccgcacaagctgcagcggcagtggaccttctggtacgacatccagtccaag 200
                |||||||||||||||||||||||  |||||||| | ||||||||||||||||||||||||
Sbjct: 16752473 gcgaaggcgccgcacaagctgcataggcagtgggcgttctggtacgacatccagtccaag 16752532

                                                                            
Query: 201      cccaagcccggcgccgcctggggcacctcgctcaaaaagggctacaccttcgacaccgtc 260
                ||||||||||||||||| ||||| |||||||||   |||| |||||||||||||||||||
Sbjct: 16752533 cccaagcccggcgccgcgtgggggacctcgctccgcaaggcctacaccttcgacaccgtc 16752592

                            
Query: 261      gaagagttctgg 272
                || |||||||||
Sbjct: 16752593 gaggagttctgg 16752604

---

>gb|AY423377.1| Pisum sativum cultivar JI2009 eukaryotic translation initiation
           factor 4E isoform (eIF(iso)4E) mRNA, partial cds
          Length = 306

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 106/125 (84%)
 Strand = Plus / Plus

                                                                       
Query: 243 tacaccttcgacaccgtcgaagagttctggtgtttatatgatcagattttccgtccgagt 302
           |||| ||||||||||||||||||||||||||||||  |||||||||| |||   || || 
Sbjct: 80  tacagcttcgacaccgtcgaagagttctggtgtttgcatgatcagatattcaagcccagc 139

                                                                       
Query: 303 aagttggtaggaagtgctgattttcatttattcaaggctggggtagaaccaaagtgggaa 362
           ||||||   || | |||||||||||| || ||||||| |||||| ||||| |||||||||
Sbjct: 140 aagttgcctggcaatgctgattttcacttgttcaaggatggggttgaaccgaagtgggaa 199

                
Query: 363 gatcc 367
           |||||
Sbjct: 200 gatcc 204



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 409 ggaaggccaaccttgataccatgtggcttgaaacgtgcatggctctgattg 459
           |||||| ||| ||||||||||||||||||||||| |  |||||| ||||||
Sbjct: 246 ggaagggcaatcttgataccatgtggcttgaaactttgatggctttgattg 296

---

>gb|AF530163.1| Lactuca sativa eukaryotic translation initiation factor iso4E
           (eIF(iso)4E) mRNA, complete cds
          Length = 938

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 163/203 (80%)
 Strand = Plus / Plus

                                                                       
Query: 240 ggctacaccttcgacaccgtcgaagagttctggtgtttatatgatcagattttccgtccg 299
           |||||||| |||||||||||||||||||| |||||| | ||||| ||| | |||   || 
Sbjct: 215 ggctacactttcgacaccgtcgaagagttttggtgtctgtatgaccaggtattcaaacct 274

                                                                       
Query: 300 agtaagttggtaggaagtgctgattttcatttattcaaggctggggtagaaccaaagtgg 359
           || ||| |   ||||| ||||||||| ||||| ||||| |||||| | || || || |||
Sbjct: 275 agcaagcttccaggaaatgctgatttccatttgttcaaagctgggattgagcctaaatgg 334

                                                                       
Query: 360 gaagatccagagtgcgcaaatgggggcaaatggactgtgatatctagcaggaaggccaac 419
           |||||||||||||| |||||||| || || ||||| || |    |||||| ||||| |||
Sbjct: 335 gaagatccagagtgtgcaaatggagggaagtggacagttactagtagcagaaaggctaac 394

                                  
Query: 420 cttgataccatgtggcttgaaac 442
           ||||| || |||||| |||||||
Sbjct: 395 cttgaaactatgtggtttgaaac 417

---

>gb|DQ022082.1| Capsicum annuum cultivar Florida VR2 eukaryotic initiation factor
           4E (eIF(iso)4E) mRNA, eIF(iso)4E-pvr6+ allele, complete
           cds
          Length = 609

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 121/149 (81%)
 Strand = Plus / Plus

                                                                       
Query: 249 ttcgacaccgtcgaagagttctggtgtttatatgatcagattttccgtccgagtaagttg 308
           ||||| ||||| ||||| |||||| |||||||||||||||| |||   || || ||||||
Sbjct: 178 ttcgataccgttgaagaattctggagtttatatgatcagatattcaagcccagcaagttg 237

                                                                       
Query: 309 gtaggaagtgctgattttcatttattcaaggctggggtagaaccaaagtgggaagatcca 368
              |  | ||| ||||||||||| ||||| |||||| | || || || ||||||||||| 
Sbjct: 238 actgttaatgcggattttcatttgttcaaagctgggattgagcccaaatgggaagatcct 297

                                        
Query: 369 gagtgcgcaaatgggggcaaatggactgt 397
           |||||||| ||||| ||||| ||||||||
Sbjct: 298 gagtgcgctaatggtggcaagtggactgt 326

---

>gb|DQ022081.1| Capsicum annuum cultivar Yolo Y eukaryotic initiation factor 4E
           (eIF(iso)4E) mRNA, eIF(iso)4E-pvr6+ allele, complete cds
          Length = 609

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 121/149 (81%)
 Strand = Plus / Plus

                                                                       
Query: 249 ttcgacaccgtcgaagagttctggtgtttatatgatcagattttccgtccgagtaagttg 308
           ||||| ||||| ||||| |||||| |||||||||||||||| |||   || || ||||||
Sbjct: 178 ttcgataccgttgaagaattctggagtttatatgatcagatattcaagcccagcaagttg 237

                                                                       
Query: 309 gtaggaagtgctgattttcatttattcaaggctggggtagaaccaaagtgggaagatcca 368
              |  | ||| ||||||||||| ||||| |||||| | || || || ||||||||||| 
Sbjct: 238 actgttaatgcggattttcatttgttcaaagctgggattgagcccaaatgggaagatcct 297

                                        
Query: 369 gagtgcgcaaatgggggcaaatggactgt 397
           |||||||| ||||| ||||| ||||||||
Sbjct: 298 gagtgcgctaatggtggcaagtggactgt 326

---

>gb|DQ022080.1| Capsicum annuum cultivar Yolo Wonder eukaryotic initiation factor
           4E (eIF(iso)4E) mRNA, eIF(iso)4E-pvr6+ allele, complete
           cds
          Length = 609

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 121/149 (81%)
 Strand = Plus / Plus

                                                                       
Query: 249 ttcgacaccgtcgaagagttctggtgtttatatgatcagattttccgtccgagtaagttg 308
           ||||| ||||| ||||| |||||| |||||||||||||||| |||   || || ||||||
Sbjct: 178 ttcgataccgttgaagaattctggagtttatatgatcagatattcaagcccagcaagttg 237

                                                                       
Query: 309 gtaggaagtgctgattttcatttattcaaggctggggtagaaccaaagtgggaagatcca 368
              |  | ||| ||||||||||| ||||| |||||| | || || || ||||||||||| 
Sbjct: 238 actgttaatgcggattttcatttgttcaaagctgggattgagcccaaatgggaagatcct 297

                                        
Query: 369 gagtgcgcaaatgggggcaaatggactgt 397
           |||||||| ||||| ||||| ||||||||
Sbjct: 298 gagtgcgctaatggtggcaagtggactgt 326

---

>gb|DQ022084.1| Capsicum annuum cultivar DH801 eukaryotic initiation factor 4E
           (eIF(iso)4E) mRNA, eIF(iso)4E-pvr6 allele, complete cds
          Length = 527

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 120/149 (80%)
 Strand = Plus / Plus

                                                                       
Query: 249 ttcgacaccgtcgaagagttctggtgtttatatgatcagattttccgtccgagtaagttg 308
           ||||| ||||| ||||| |||||| |||||||||||||||| |||   || || ||||||
Sbjct: 96  ttcgataccgttgaagaattctggagtttatatgatcagatattcaagcccagcaagttg 155

                                                                       
Query: 309 gtaggaagtgctgattttcatttattcaaggctggggtagaaccaaagtgggaagatcca 368
              |  | ||| ||||||||||| |||||  ||||| | || || || ||||||||||| 
Sbjct: 156 actgttaatgcggattttcatttgttcaaaactgggattgagcccaaatgggaagatcct 215

                                        
Query: 369 gagtgcgcaaatgggggcaaatggactgt 397
           |||||||| ||||| ||||| ||||||||
Sbjct: 216 gagtgcgctaatggtggcaagtggactgt 244

---

>gb|DQ022083.1| Capsicum annuum cultivar Perennial eukaryotic initiation factor 4E
           (eIF(iso)4E) mRNA, eIF(iso)4E-pvr6 allele, complete cds
          Length = 527

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 120/149 (80%)
 Strand = Plus / Plus

                                                                       
Query: 249 ttcgacaccgtcgaagagttctggtgtttatatgatcagattttccgtccgagtaagttg 308
           ||||| ||||| ||||| |||||| |||||||||||||||| |||   || || ||||||
Sbjct: 96  ttcgataccgttgaagaattctggagtttatatgatcagatattcaagcccagcaagttg 155

                                                                       
Query: 309 gtaggaagtgctgattttcatttattcaaggctggggtagaaccaaagtgggaagatcca 368
              |  | ||| ||||||||||| |||||  ||||| | || || || ||||||||||| 
Sbjct: 156 actgttaatgcggattttcatttgttcaaaactgggattgagcccaaatgggaagatcct 215

                                        
Query: 369 gagtgcgcaaatgggggcaaatggactgt 397
           |||||||| ||||| ||||| ||||||||
Sbjct: 216 gagtgcgctaatggtggcaagtggactgt 244

---

>ref|NM_122953.1| Arabidopsis thaliana LSP1 (LOSS OF SUSCEPTIBILITY TO POTYVIRUSES);
           RNA binding / translation initiation factor AT5G35620
           (LSP1) transcript variant AT5G35620.1 mRNA, complete cds
          Length = 842

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 333 ttcaaggctggggtagaaccaaagtgggaagatccagagtgcgcaaatgggggcaaatgg 392
           ||||| ||||| || || ||||||||||||||||||||||| || ||||| || || |||
Sbjct: 310 ttcaaagctggtgttgagccaaagtgggaagatccagagtgtgctaatggaggaaagtgg 369

              
Query: 393 act 395
           |||
Sbjct: 370 act 372

---

>ref|NM_203123.1| Arabidopsis thaliana LSP1 (LOSS OF SUSCEPTIBILITY TO POTYVIRUSES);
           RNA binding / translation initiation factor AT5G35620
           (LSP1) transcript variant AT5G35620.2 mRNA, complete cds
          Length = 1293

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 333 ttcaaggctggggtagaaccaaagtgggaagatccagagtgcgcaaatgggggcaaatgg 392
           ||||| ||||| || || ||||||||||||||||||||||| || ||||| || || |||
Sbjct: 287 ttcaaagctggtgttgagccaaagtgggaagatccagagtgtgctaatggaggaaagtgg 346

              
Query: 393 act 395
           |||
Sbjct: 347 act 349

---

>emb|Y10547.1|ATEIF4EIS A.thaliana mRNA for eIF4Eiso protein
          Length = 812

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 333 ttcaaggctggggtagaaccaaagtgggaagatccagagtgcgcaaatgggggcaaatgg 392
           ||||| ||||| || || ||||||||||||||||||||||| || ||||| || || |||
Sbjct: 277 ttcaaagctggtgttgagccaaagtgggaagatccagagtgtgctaatggaggaaagtgg 336

              
Query: 393 act 395
           |||
Sbjct: 337 act 339

---

>gb|AF538308.1| Arabidopsis thaliana cap binding protein eIF(iso)4E (At5g35620)
           gene, complete cds
          Length = 1474

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 333 ttcaaggctggggtagaaccaaagtgggaagatccagagtgcgcaaatgggggcaaatgg 392
           ||||| ||||| || || ||||||||||||||||||||||| || ||||| || || |||
Sbjct: 430 ttcaaagctggtgttgagccaaagtgggaagatccagagtgtgctaatggaggaaagtgg 489

              
Query: 393 act 395
           |||
Sbjct: 490 act 492

---

>gb|AY081514.1| Arabidopsis thaliana eIF4Eiso protein (At5g35620) mRNA, complete
           cds
          Length = 659

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 333 ttcaaggctggggtagaaccaaagtgggaagatccagagtgcgcaaatgggggcaaatgg 392
           ||||| ||||| || || ||||||||||||||||||||||| || ||||| || || |||
Sbjct: 250 ttcaaagctggtgttgagccaaagtgggaagatccagagtgtgctaatggaggaaagtgg 309

              
Query: 393 act 395
           |||
Sbjct: 310 act 312

---

>gb|AY054630.1| Arabidopsis thaliana eIF4Eiso protein (At5g35620; MJE4.8) mRNA,
           complete cds
          Length = 811

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 333 ttcaaggctggggtagaaccaaagtgggaagatccagagtgcgcaaatgggggcaaatgg 392
           ||||| ||||| || || ||||||||||||||||||||||| || ||||| || || |||
Sbjct: 291 ttcaaagctggtgttgagccaaagtgggaagatccagagtgtgctaatggaggaaagtgg 350

              
Query: 393 act 395
           |||
Sbjct: 351 act 353

---

>emb|BX831945.1|CNS0A12Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH40ZH02 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1293

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 333 ttcaaggctggggtagaaccaaagtgggaagatccagagtgcgcaaatgggggcaaatgg 392
           ||||| ||||| || || ||||||||||||||||||||||| || ||||| || || |||
Sbjct: 287 ttcaaagctggtgttgagccaaagtgggaagatccagagtgtgctaatggaggaaagtgg 346

              
Query: 393 act 395
           |||
Sbjct: 347 act 349

---

>gb|AY086315.1| Arabidopsis thaliana clone 23770 mRNA, complete sequence
          Length = 843

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 333 ttcaaggctggggtagaaccaaagtgggaagatccagagtgcgcaaatgggggcaaatgg 392
           ||||| ||||| || || ||||||||||||||||||||||| || ||||| || || |||
Sbjct: 311 ttcaaagctggtgttgagccaaagtgggaagatccagagtgtgctaatggaggaaagtgg 370

              
Query: 393 act 395
           |||
Sbjct: 371 act 373

---

>dbj|AB013393.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJE4
          Length = 63989

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Minus

                                                                         
Query: 333   ttcaaggctggggtagaaccaaagtgggaagatccagagtgcgcaaatgggggcaaatgg 392
             ||||| ||||| || || ||||||||||||||||||||||| || ||||| || || |||
Sbjct: 35814 ttcaaagctggtgttgagccaaagtgggaagatccagagtgtgctaatggaggaaagtgg 35755

                
Query: 393   act 395
             |||
Sbjct: 35754 act 35752

---

>gb|U62044.1|ATU62044 Arabidopsis thaliana eukaryotic initiation factor (iso)-4F p28
           subunit mRNA, partial cds
          Length = 812

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 333 ttcaaggctggggtagaaccaaagtgggaagatccagagtgcgcaaatgggggcaaatgg 392
           ||||| ||||| || || ||||||||||||||||||||||| || ||||| || || |||
Sbjct: 304 ttcaaagctggtgttgagccaaagtgggaagatccagagtgtgctaatggaggaaagtgg 363

              
Query: 393 act 395
           |||
Sbjct: 364 act 366

---

>gb|BT014561.1| Lycopersicon esculentum clone 134015R, mRNA sequence
          Length = 840

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 61/73 (83%)
 Strand = Plus / Plus

                                                                       
Query: 324 tttcatttattcaaggctggggtagaaccaaagtgggaagatccagagtgcgcaaatggg 383
           |||||||| ||||| |||||| | || || || ||||||||||| ||||| || ||||| 
Sbjct: 304 tttcatttgttcaaagctgggattgagcccaaatgggaagatcctgagtgtgccaatggt 363

                        
Query: 384 ggcaaatggactg 396
           ||||| |||||||
Sbjct: 364 ggcaagtggactg 376

---

>gb|AY699609.1| Nicotiana tabacum eukaryotic initiation factor iso4E (eIFiso4E)
           mRNA, complete cds
          Length = 867

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 95/119 (79%)
 Strand = Plus / Plus

                                                                       
Query: 324 tttcatttattcaaggctggggtagaaccaaagtgggaagatccagagtgcgcaaatggg 383
           |||||||| ||||| |||||| | || || || ||||||||||| ||||| || | ||| 
Sbjct: 316 tttcatttgttcaaagctgggattgagcccaaatgggaagatcctgagtgtgctagtggt 375

                                                                      
Query: 384 ggcaaatggactgtgatatctagcaggaaggccaaccttgataccatgtggcttgaaac 442
           ||||| |||||||| |     ||||| ||||| || ||||| || ||||||||||||||
Sbjct: 376 ggcaagtggactgttacgagcagcagaaaggctaatcttgagactatgtggcttgaaac 434

---

>emb|CR339049.6| Zebrafish DNA sequence from clone CH211-165D12 in linkage group 3,
             complete sequence
          Length = 126083

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 273   tgtttatatgatcagattttcc 294
             ||||||||||||||||||||||
Sbjct: 88719 tgtttatatgatcagattttcc 88740

---

>gb|AC126802.4| Mus musculus BAC clone RP24-543J12 from chromosome 5, complete sequence
          Length = 154808

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 317    tgctgattttcatttattcaa 337
              |||||||||||||||||||||
Sbjct: 129697 tgctgattttcatttattcaa 129717

---

>emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genome; segment 13/16
          Length = 349746

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 112   cggccgagagcgacgcgggcg 132
             |||||||||||||||||||||
Sbjct: 50660 cggccgagagcgacgcgggcg 50680

---

>gb|AC023992.8| Homo sapiens chromosome 17, clone RP11-247I5, complete sequence
          Length = 135810

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 314   aagtgctgattttcatttattcaag 338
             |||||||||||||||||| ||||||
Sbjct: 76290 aagtgctgattttcattttttcaag 76266

---

>gb|AC004687.1|AC004687 Homo sapiens chromosome 17, clone hRPC.1171_I_10, complete sequence
          Length = 175120

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 314  aagtgctgattttcatttattcaag 338
            |||||||||||||||||| ||||||
Sbjct: 8053 aagtgctgattttcattttttcaag 8077

---

>ref|XM_545328.2| PREDICTED: Canis familiaris similar to ras responsive element binding
            protein 1 isoform 1 (LOC488206), mRNA
          Length = 5299

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 113  ggccgagagcgacgcgggcgcggc 136
            ||||||| ||||||||||||||||
Sbjct: 4297 ggccgagggcgacgcgggcgcggc 4320

---

>gb|AC102566.9| Mus musculus chromosome 9, clone RP23-223D10, complete sequence
          Length = 253343

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 354   aagtgggaagatccagagtg 373
             ||||||||||||||||||||
Sbjct: 82599 aagtgggaagatccagagtg 82618

---

>emb|Z93942.1|HS230I19 Human DNA sequence from clone RP1-230I19 on chromosome 20q12-13.12
              Contains part of the PTPRT gene for protein tyrosine
              phosphatase receptor type T,  genomic marker D20S858, a ca
              repeat polymorphism, ESTs, STS and GSSs, complete sequence
          Length = 144201

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 370    agtgcgcaaatgggggcaaatgga 393
              |||| |||||||||||||||||||
Sbjct: 113109 agtgagcaaatgggggcaaatgga 113132

---

>emb|AL137848.5| Human DNA sequence from clone RP11-77D6 on chromosome 9q31.1-32 Contains
              part of a novel gene, the OGN gene for osteoglycin
              (osteoinductive factor, mimecan), the OMD gene for
              osteomodulin, the ASPN gene for asporin (LRR class 1) and
              the 3' end of the ECM2 gene for extracellular matrix
              protein 2 (female organ and adipocyte specific), complete
              sequence
          Length = 152341

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 412    aggccaaccttgataccatg 431
              ||||||||||||||||||||
Sbjct: 123094 aggccaaccttgataccatg 123113

---

>emb|CR450776.4| Zebrafish DNA sequence from clone DKEY-48J7 in linkage group 8,
             complete sequence
          Length = 126481

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 317   tgctgattttcatttattca 336
             ||||||||||||||||||||
Sbjct: 47222 tgctgattttcatttattca 47203

---

>gb|AC012146.25| Homo sapiens chromosome 17, clone RP11-46I8, complete sequence
          Length = 171309

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 198    aagcccaagcccggcgccgc 217
              ||||||||||||||||||||
Sbjct: 149263 aagcccaagcccggcgccgc 149282

---

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 30       ggaaagcaaaggcggcggcg 49
                ||||||||||||||||||||
Sbjct: 15974403 ggaaagcaaaggcggcggcg 15974384

---

>dbj|AP005642.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0040K22
          Length = 155832

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    ggaaagcaaaggcggcggcg 49
             ||||||||||||||||||||
Sbjct: 55805 ggaaagcaaaggcggcggcg 55786


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,581,637
Number of Sequences: 3902068
Number of extensions: 3581637
Number of successful extensions: 75346
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75108
Number of HSP's gapped (non-prelim): 233
length of query: 459
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 437
effective length of database: 17,147,199,772
effective search space: 7493326300364
effective search space used: 7493326300364
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---