| Clone Name | bart52f07 |
|---|---|
| Clone Library Name | barley_pub |
>RAA3_CHLRE (Q9FEC4) Trans-splicing factor Raa3, chloroplast precursor| Length = 1783 Score = 32.0 bits (71), Expect = 0.82 Identities = 26/69 (37%), Positives = 36/69 (52%) Frame = -1 Query: 415 RVATTADRLSKVAWRLRALASPSLAMEPSSRPSEYGA*ETTPSVAVSSSLSTARDEGNMR 236 R++ TA AW+ A+A+P A PS P A P+ SS+L T +G+MR Sbjct: 272 RISQTAGE----AWKAGAVAAPPAAPTPS--PPGLAA---APTRLASSALGTHSSDGDMR 322 Query: 235 R*ADTGRET 209 R A GR+T Sbjct: 323 R-AVPGRDT 330
>IAAG_MAIZE (Q41819) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121)| (IAA-Glu synthetase) ((Uridine 5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl transferase) Length = 471 Score = 31.6 bits (70), Expect = 1.1 Identities = 35/119 (29%), Positives = 45/119 (37%), Gaps = 3/119 (2%) Frame = +3 Query: 102 HFLIVAYGIQSHLNPCRVLAHRLARLHDGSGPVLATVSLPVSAHRRMFPSSRAVDNDEDT 281 H L+V + Q H+NP A RLA G L T R D D Sbjct: 4 HVLVVPFPGQGHMNPMVQFAKRLA--SKGVATTLVTTRF----------IQRTADVDAHP 51 Query: 282 ATDGVVSYAPYSDGLDDG---SMARDGEARARSRHATFESLSAVVATLAARGRPVTCVV 449 A + SDG D+G S A E + A SL+++V A+ TCVV Sbjct: 52 AMVEAI-----SDGHDEGGFASAAGVAEYLEKQAAAASASLASLVEARASSADAFTCVV 105
>MURB_SHEON (Q8EK85) UDP-N-acetylenolpyruvoylglucosamine reductase (EC| 1.1.1.158) (UDP-N-acetylmuramate dehydrogenase) Length = 341 Score = 31.2 bits (69), Expect = 1.4 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +3 Query: 78 NGGVHTGHHFLIVAYGIQSHLNPCRVLAHRLARLHDGSGPVL 203 N GVH ++V G + + CR+ H +AR+HD G +L Sbjct: 283 NAGVHAKQALVLVNLGNATGQDICRLALHVIARVHDVFGVML 324
>ATG13_ASPFU (Q4WHN5) Autophagy-related protein 13| Length = 958 Score = 30.0 bits (66), Expect = 3.1 Identities = 21/66 (31%), Positives = 29/66 (43%) Frame = +3 Query: 228 AHRRMFPSSRAVDNDEDTATDGVVSYAPYSDGLDDGSMARDGEARARSRHATFESLSAVV 407 +HRR PSS ++ ED A+ G S G +A A S HA E++S + Sbjct: 496 SHRRGRPSSGGINKIEDDASSGKASATSSGAQPGSGLLAEVTGTSADSLHADDENISEFL 555 Query: 408 ATLAAR 425 L R Sbjct: 556 KMLDLR 561
>GCSP_RALSO (Q8XU98) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)| (Glycine decarboxylase) (Glycine cleavage system P-protein) Length = 982 Score = 29.3 bits (64), Expect = 5.3 Identities = 22/64 (34%), Positives = 28/64 (43%) Frame = +3 Query: 123 GIQSHLNPCRVLAHRLARLHDGSGPVLATVSLPVSAHRRMFPSSRAVDNDEDTATDGVVS 302 G SHLN L H G GP + V+ V AH F RA ++ + G VS Sbjct: 720 GDVSHLN----LHKTFCIPHGGGGPGVGPVA--VGAHLAPFLPGRAASGEDASQNIGAVS 773 Query: 303 YAPY 314 AP+ Sbjct: 774 AAPF 777
>SPAG1_MOUSE (Q80ZX8) Sperm-associated antigen 1 (Infertility-related sperm| protein Spag-1) (TPR-containing protein involved in spermatogenesis) (TPIS) Length = 901 Score = 29.3 bits (64), Expect = 5.3 Identities = 15/60 (25%), Positives = 26/60 (43%) Frame = +3 Query: 264 DNDEDTATDGVVSYAPYSDGLDDGSMARDGEARARSRHATFESLSAVVATLAARGRPVTC 443 D + + + + AP DG++DG A E S+ V++T++AR C Sbjct: 741 DEEPERPAEASATSAPARDGVEDGGSAEPAEKLDVSKPTNAYEFGQVLSTISARKDEEAC 800
>EXO70_GIBZE (Q4ILI9) Exocyst complex protein EXO70| Length = 632 Score = 28.9 bits (63), Expect = 6.9 Identities = 21/73 (28%), Positives = 34/73 (46%) Frame = +3 Query: 108 LIVAYGIQSHLNPCRVLAHRLARLHDGSGPVLATVSLPVSAHRRMFPSSRAVDNDEDTAT 287 LI +Y ++SH N LAH A + GP L+ ++A ++ D T Sbjct: 190 LIYSYVVESHHNGASELAHIYAEVR---GPYLSASLANLAAASVNTAKKKSPDAVYRAGT 246 Query: 288 DGVVSYAPYSDGL 326 +G+ +YA +GL Sbjct: 247 NGMGTYAQAMEGL 259
>ZBT12_HUMAN (Q9Y330) Zinc finger and BTB domain-containing protein 12 (Protein| G10) Length = 459 Score = 28.9 bits (63), Expect = 6.9 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 7/65 (10%) Frame = -3 Query: 362 PRLAVPGHGAVVEAVGVWSVRDDAVGGGILIVVDG-------SGRREHAAVSGHREGDGG 204 P P G V +S+ +DA G G+L++ G SG E AAV+ G GG Sbjct: 253 PSTVAPPQGVVKAC---YSLSEDAEGEGLLLIPGGRASVGATSGLVEAAAVAMAARGAGG 309 Query: 203 EDGPG 189 G G Sbjct: 310 SLGAG 314
>LOX15_RABIT (P12530) Arachidonate 15-lipoxygenase (EC 1.13.11.33) (Omega-6| lipoxygenase) (Erythroid cell-specific 15-lipoxygenase) (15-LOX) Length = 662 Score = 28.5 bits (62), Expect = 9.1 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = +1 Query: 253 PEPSTTMRIPPPTASSLTLHTPTAS 327 P TMR+PPPT TL T A+ Sbjct: 555 PNAPCTMRLPPPTTKDATLETVMAT 579
>LOX12_RABIT (O19043) Arachidonate 12-lipoxygenase, 12S-type (EC 1.13.11.31)| (12-LOX) Length = 662 Score = 28.5 bits (62), Expect = 9.1 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = +1 Query: 253 PEPSTTMRIPPPTASSLTLHTPTAS 327 P TMR+PPPT TL T A+ Sbjct: 555 PNAPCTMRLPPPTTKDATLETVMAT 579
>LOX12_PIG (P16469) Arachidonate 12-lipoxygenase, 12S-type (EC 1.13.11.31)| (12-LOX) Length = 662 Score = 28.5 bits (62), Expect = 9.1 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = +1 Query: 253 PEPSTTMRIPPPTASSLTLHTPTAS 327 P TMR+PPPT TL T A+ Sbjct: 555 PNAPCTMRLPPPTTKDATLETVMAT 579
>LOX15_PONPY (Q5RBE8) Arachidonate 15-lipoxygenase (EC 1.13.11.33) (Arachidonate| omega-6 lipoxygenase) (15-LOX) Length = 661 Score = 28.5 bits (62), Expect = 9.1 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = +1 Query: 253 PEPSTTMRIPPPTASSLTLHTPTAS 327 P TMR+PPPT TL T A+ Sbjct: 554 PNAPCTMRLPPPTTKDATLETVMAT 578
>LOX15_HUMAN (P16050) Arachidonate 15-lipoxygenase (EC 1.13.11.33) (Arachidonate| omega-6 lipoxygenase) (15-LOX) Length = 661 Score = 28.5 bits (62), Expect = 9.1 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = +1 Query: 253 PEPSTTMRIPPPTASSLTLHTPTAS 327 P TMR+PPPT TL T A+ Sbjct: 554 PNAPCTMRLPPPTTKDATLETVMAT 578 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,614,268 Number of Sequences: 219361 Number of extensions: 954280 Number of successful extensions: 3704 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 3482 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3697 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)