| Clone Name | bart51g03 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | PIRL_LYCES (Q9SEE4) Pirin-like protein | 49 | 6e-06 | 2 | PIR_MOUSE (Q9D711) Pirin | 38 | 0.013 | 3 | PIR_HUMAN (O00625) Pirin | 38 | 0.013 | 4 | PIRL2_ARATH (Q9ZW82) Putative pirin-like protein At2g43120 | 37 | 0.030 | 5 | PIRL1_ARATH (Q9LPS9) Putative pirin-like protein At1g50590 | 32 | 0.73 |
|---|
>PIRL_LYCES (Q9SEE4) Pirin-like protein| Length = 291 Score = 48.9 bits (115), Expect = 6e-06 Identities = 23/38 (60%), Positives = 28/38 (73%) Frame = +2 Query: 335 RSRAVVQKFMCETQVVGDGFALRRSIGRPELQSLDPFI 448 R R VV+K + Q GDG +RRSIGRPELQ+LDPF+ Sbjct: 9 RPRLVVKKVLARAQNEGDGAIVRRSIGRPELQNLDPFL 46
>PIR_MOUSE (Q9D711) Pirin| Length = 290 Score = 37.7 bits (86), Expect = 0.013 Identities = 18/37 (48%), Positives = 24/37 (64%) Frame = +2 Query: 338 SRAVVQKFMCETQVVGDGFALRRSIGRPELQSLDPFI 448 S+ V + Q G G +RRSIGRPEL++LDPF+ Sbjct: 4 SKKVTLSVLSREQSEGVGARVRRSIGRPELKNLDPFL 40
>PIR_HUMAN (O00625) Pirin| Length = 290 Score = 37.7 bits (86), Expect = 0.013 Identities = 18/37 (48%), Positives = 24/37 (64%) Frame = +2 Query: 338 SRAVVQKFMCETQVVGDGFALRRSIGRPELQSLDPFI 448 S+ V + Q G G +RRSIGRPEL++LDPF+ Sbjct: 4 SKKVTLSVLSREQSEGVGARVRRSIGRPELKNLDPFL 40
>PIRL2_ARATH (Q9ZW82) Putative pirin-like protein At2g43120| Length = 296 Score = 36.6 bits (83), Expect = 0.030 Identities = 17/37 (45%), Positives = 23/37 (62%) Frame = +2 Query: 338 SRAVVQKFMCETQVVGDGFALRRSIGRPELQSLDPFI 448 SR V++K + Q GDG +RR I R E + LDPF+ Sbjct: 11 SRPVIKKVFAKLQKEGDGAVVRRGISRSEQKLLDPFL 47
>PIRL1_ARATH (Q9LPS9) Putative pirin-like protein At1g50590| Length = 310 Score = 32.0 bits (71), Expect = 0.73 Identities = 17/43 (39%), Positives = 22/43 (51%) Frame = +2 Query: 320 KHPVRRSRAVVQKFMCETQVVGDGFALRRSIGRPELQSLDPFI 448 K +R VV+K G G +RRSIGR E + DPF+ Sbjct: 6 KSSATNTRLVVKKLFARQLHEGFGAVVRRSIGRFEFRYFDPFL 48 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,984,495 Number of Sequences: 219361 Number of extensions: 480321 Number of successful extensions: 1496 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1473 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1496 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)